Lotus
BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0323a.10
         (175 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC78281 weakly similar to GP|14423500|gb|AAK62432.1 Unknown prot...   180  2e-46
BG451575 similar to SP|Q41495|ST14 STS14 protein precursor. [Pot...   158  1e-39
TC85927 PR-1                                                          122  9e-29
TC86002 weakly similar to PIR|S10205|S10205 pathogenesis-related...   108  8e-25
TC88317 weakly similar to PIR|T04989|T04989 pathogenesis-related...   102  6e-23
TC79410 similar to PIR|H84518|H84518 pathogenesis-related PR-1-l...   102  1e-22
TC93107 weakly similar to GP|13560653|gb|AAK30143.1 pathogenesis...   101  1e-22
TC79969 weakly similar to PIR|T04232|T04232 pathogenesis-related...   100  4e-22
TC85928 SP|Q40374|PR1_MEDTR Pathogenesis-related protein PR-1 pr...    62  5e-21
AJ311227 similar to PIR|H84518|H845 pathogenesis-related PR-1-li...    94  3e-20
TC86003 weakly similar to GP|7407641|gb|AAF62171.1| pathogenesis...    65  1e-11
BQ148878 weakly similar to GP|4928711|gb|A PR1a precursor {Glyci...    58  2e-09
AJ497635 similar to GP|688429|dbj|B tumor-related protein {Nicot...    28  0.071
TC81918 similar to GP|21594031|gb|AAM65949.1 unknown {Arabidopsi...    32  0.099
BF650485 similar to GP|21594012|gb|A unknown {Arabidopsis thalia...    30  0.64
TC77382 similar to GP|14517512|gb|AAK62646.1 AT4g37300/C7A10_60 ...    30  0.64
TC76791 similar to GP|21311555|gb|AAM46778.1 15.8 kDa oleosin {T...    29  0.83
TC79586 similar to SP|P52425|GPDA_CUPLA Glycerol-3-phosphate deh...    29  1.1
BF644406 similar to GP|13560653|gb| pathogenesis-related protein...    29  1.1
TC79716 weakly similar to SP|O24495|GL2M_ARATH Hydroxyacylglutat...    28  1.9

>TC78281 weakly similar to GP|14423500|gb|AAK62432.1 Unknown protein
           {Arabidopsis thaliana}, partial (71%)
          Length = 760

 Score =  180 bits (457), Expect = 2e-46
 Identities = 98/177 (55%), Positives = 121/177 (67%), Gaps = 9/177 (5%)
 Frame = +3

Query: 8   FFSLA-LALFLLSAEAA-----TVLDSVVPQLSAEAKEFLDAHNWARAEVGVEPLEWSEA 61
           FFSLA L+L L+S+ AA     T   +  P L+  AKEFL++HN ARAEVGVEPL+WSE 
Sbjct: 72  FFSLATLSLLLVSSTAARPAATTPEPTAPPPLTPAAKEFLESHNKARAEVGVEPLQWSEK 251

Query: 62  LAKDAGLFARYQRDRLGCKLANFSHNKYGSNQDLGG--MGWTPSVAVQDWVNEKEFYSYR 119
           LAKD  L  RYQR+++ C  AN + +KYG NQ   G     TPS AV++WV EKEFY + 
Sbjct: 252 LAKDTSLLVRYQRNKMACDFANLTASKYGGNQLWAGSAAAVTPSKAVEEWVKEKEFYIHV 431

Query: 120 TNSCVAPSFPCWHYTQVVWRKSKQVGCAQLTCVVDK-LILTICFYDPPGNINGESPY 175
            N+CV  +  C  YTQVVW+KS Q+GC+Q TC   K   LTICFYDPPGN+ GESP+
Sbjct: 432 NNTCVV-NHECGVYTQVVWKKSAQLGCSQATCTGKKEASLTICFYDPPGNVIGESPF 599


>BG451575 similar to SP|Q41495|ST14 STS14 protein precursor. [Potato]
           {Solanum tuberosum}, partial (48%)
          Length = 427

 Score =  158 bits (399), Expect = 1e-39
 Identities = 77/140 (55%), Positives = 94/140 (67%), Gaps = 1/140 (0%)
 Frame = +1

Query: 37  AKEFLDAHNWARAEVGVEPLEWSEALAKDAGLFARYQRDRLGCKLANFSHNKYGSNQDLG 96
           A+EFL  HN ARA VGVEPL WSE LA       RYQRD+L C+ AN +  KYG+NQ + 
Sbjct: 4   AREFLQTHNQARASVGVEPLTWSEQLANTTSKLVRYQRDKLSCQFANLTAGKYGANQLMA 183

Query: 97  -GMGWTPSVAVQDWVNEKEFYSYRTNSCVAPSFPCWHYTQVVWRKSKQVGCAQLTCVVDK 155
            G   TP + V++WV EKEFY++  N+CV  +  C  YTQVVWRKS ++GCAQ TC  + 
Sbjct: 184 RGAAVTPRMVVEEWVKEKEFYNHSDNTCVV-NHRCGVYTQVVWRKSVELGCAQTTCGKED 360

Query: 156 LILTICFYDPPGNINGESPY 175
             L+ICFY PPGN  G SPY
Sbjct: 361 TXLSICFYYPPGNYVGXSPY 420


>TC85927 PR-1
          Length = 949

 Score =  122 bits (305), Expect = 9e-29
 Identities = 73/172 (42%), Positives = 96/172 (55%), Gaps = 5/172 (2%)
 Frame = +2

Query: 9   FSLALALFLLSAEAATVLDSVVPQLSAEAK----EFLDAHNWARAEVGVEPLEWSEALAK 64
           FS AL L LL+  +      +  + S +++    +FL   N ARA VG+ PL W + L  
Sbjct: 62  FSFALFLLLLTFISHVSASYIPNKKSFKSRSFKNQFLIPQNIARAAVGLRPLVWDDKLTH 241

Query: 65  DAGLFARYQRDRLGCKLANFSHNKYGSNQDLG-GMGWTPSVAVQDWVNEKEFYSYRTNSC 123
            A  +A  +R+   C L + S+  YG N   G G+GW P+ AV  WV+EK+FY+Y  NSC
Sbjct: 242 YAQWYANQRRN--DCALEH-SNGPYGENIFWGSGVGWNPAQAVSAWVDEKQFYNYWHNSC 412

Query: 124 VAPSFPCWHYTQVVWRKSKQVGCAQLTCVVDKLILTICFYDPPGNINGESPY 175
           V     C HYTQVVW  + +VGCA + C  DK     C YDPPGN  GE PY
Sbjct: 413 VDGEM-CGHYTQVVWGSTTKVGCASVVCSDDKGTFMTCNYDPPGNYYGERPY 565


>TC86002 weakly similar to PIR|S10205|S10205 pathogenesis-related protein 1
           - common tobacco, partial (72%)
          Length = 830

 Score =  108 bits (271), Expect = 8e-25
 Identities = 54/138 (39%), Positives = 80/138 (57%)
 Frame = +1

Query: 38  KEFLDAHNWARAEVGVEPLEWSEALAKDAGLFARYQRDRLGCKLANFSHNKYGSNQDLGG 97
           +++L  HN AR++VGV P+ W   +A  A  +    + +  CK+ + S   YG N     
Sbjct: 127 QDYLKIHNKARSDVGVGPISWDAKVASYAETYVN--KLKANCKMVH-SKGPYGENLAWSS 297

Query: 98  MGWTPSVAVQDWVNEKEFYSYRTNSCVAPSFPCWHYTQVVWRKSKQVGCAQLTCVVDKLI 157
              T + AV  W+ EK++Y+Y +NSC A  + C HYTQVVWR S +VGCA++ C   +  
Sbjct: 298 GDMTGTAAVTMWIGEKKYYNYNSNSC-AVGYQCGHYTQVVWRDSVRVGCAKVKCNDGRST 474

Query: 158 LTICFYDPPGNINGESPY 175
           +  C YDPPGN  G+ P+
Sbjct: 475 IISCNYDPPGNYIGQRPF 528


>TC88317 weakly similar to PIR|T04989|T04989 pathogenesis-related protein 1
           precursor  19.3K - Arabidopsis thaliana, partial (84%)
          Length = 658

 Score =  102 bits (255), Expect = 6e-23
 Identities = 55/138 (39%), Positives = 79/138 (56%), Gaps = 1/138 (0%)
 Frame = +3

Query: 39  EFLDAHNWARAEVGVEPLEWSEALAKDAGLFARYQRDRLGCKLANFSHN-KYGSNQDLGG 97
           ++++AHN AR +VGV  + W   +A  A  +A  ++    C+L +     +YG N     
Sbjct: 120 DYVNAHNDARRQVGVANIVWDNTVASFAQDYANQRKG--DCQLIHSGGGGRYGENLAWSS 293

Query: 98  MGWTPSVAVQDWVNEKEFYSYRTNSCVAPSFPCWHYTQVVWRKSKQVGCAQLTCVVDKLI 157
              + S AV+ WVNEK  Y Y +N+C +    C HYTQVVWR S++VGCA++ C  ++  
Sbjct: 294 GDMSGSDAVKLWVNEKADYDYNSNTCASGKV-CGHYTQVVWRNSQRVGCAKVRCDNNRGT 470

Query: 158 LTICFYDPPGNINGESPY 175
              C YDPPGN  GE PY
Sbjct: 471 FITCNYDPPGNYVGEKPY 524


>TC79410 similar to PIR|H84518|H84518 pathogenesis-related PR-1-like protein
           [imported] - Arabidopsis thaliana, partial (84%)
          Length = 1002

 Score =  102 bits (253), Expect = 1e-22
 Identities = 65/173 (37%), Positives = 92/173 (52%), Gaps = 6/173 (3%)
 Frame = +2

Query: 9   FSL--ALALFLLSAEAATVLDSVVPQLSAEAKEFLDAHNWARAEVGVEPLEWSEALAKDA 66
           FSL   L LF++    A   +S          +++++HN AR +VGV  + W   LA  A
Sbjct: 41  FSLICVLGLFIIIGHVAHAQNSQA--------DYVNSHNEARRQVGVANVVWDNNLATVA 196

Query: 67  GLFARYQRDRLGCKLAN----FSHNKYGSNQDLGGMGWTPSVAVQDWVNEKEFYSYRTNS 122
             +A  +R    C+L +    +  N  GS  DL G       AV+ WVNEK  Y+Y +N+
Sbjct: 197 QNYANSRRG--DCRLTHSGGRYGENLAGSTGDLSGTD-----AVRLWVNEKNDYNYNSNT 355

Query: 123 CVAPSFPCWHYTQVVWRKSKQVGCAQLTCVVDKLILTICFYDPPGNINGESPY 175
           C +    C HYTQVVWR +K++GCA++ C      + IC YDPPGN  G+ PY
Sbjct: 356 CASGKV-CGHYTQVVWRNTKRIGCAKVRCNNGGTFI-ICNYDPPGNYVGQKPY 508


>TC93107 weakly similar to GP|13560653|gb|AAK30143.1 pathogenesis-related
           protein PR-1 precursor {Capsicum annuum}, partial (68%)
          Length = 560

 Score =  101 bits (252), Expect = 1e-22
 Identities = 61/167 (36%), Positives = 89/167 (52%), Gaps = 1/167 (0%)
 Frame = +1

Query: 10  SLALALFLLSAEAATVLDSVVPQLSAEAKEFLDAHNWARAEVGVEPLEWSEALAKDAGLF 69
           ++ LA+F + +  + +  S+        ++FL+ HN AR EVGV PL W + L   A   
Sbjct: 22  NMILAIFFICSTLSCMNISLAQN---SPQDFLEVHNQARDEVGVGPLYWEQTLEAYA--- 183

Query: 70  ARYQRDRL-GCKLANFSHNKYGSNQDLGGMGWTPSVAVQDWVNEKEFYSYRTNSCVAPSF 128
             Y   R+  C+L + S   YG N   G      + +V+ W++EK  Y Y +NSCV    
Sbjct: 184 QNYANKRIKNCELEH-SMGPYGENLAEGYGEVNGTDSVKFWLSEKPNYDYNSNSCVNDE- 357

Query: 129 PCWHYTQVVWRKSKQVGCAQLTCVVDKLILTICFYDPPGNINGESPY 175
            C HYTQ++WR S  +GCA+  C  +  +  IC Y PPGN+ GE PY
Sbjct: 358 -CGHYTQIIWRDSVHLGCAKSKC-KNGWVFVICSYSPPGNVEGERPY 492


>TC79969 weakly similar to PIR|T04232|T04232 pathogenesis-related protein
           homolog F14M19.60 - Arabidopsis thaliana, partial (78%)
          Length = 1035

 Score =  100 bits (248), Expect = 4e-22
 Identities = 58/144 (40%), Positives = 84/144 (58%), Gaps = 4/144 (2%)
 Frame = +2

Query: 36  EAKEFLDAHNWARAEVGVEPLEWSEALAKDAGLFARYQRDRLGCKLAN-FSHN--KYGSN 92
           E+ EFL  HN  RA     PL W   L + A  +A  ++    CK+ + F  +  K G N
Sbjct: 251 ESLEFLFRHNLVRASKWELPLMWDYQLEQYARWWASQRKP--DCKVEHSFPEDGFKLGEN 424

Query: 93  QDLG-GMGWTPSVAVQDWVNEKEFYSYRTNSCVAPSFPCWHYTQVVWRKSKQVGCAQLTC 151
              G G  WTP+ AV+ W +E+++Y+Y TNSCV+    C HYTQ+VW+ ++++GCA++ C
Sbjct: 425 IYWGSGSDWTPTDAVKAWADEEKYYTYVTNSCVSGQM-CGHYTQIVWKSTRRIGCARVVC 601

Query: 152 VVDKLILTICFYDPPGNINGESPY 175
               + +T C YDP GN  GE PY
Sbjct: 602 DDGDVFMT-CNYDPVGNYVGERPY 670


>TC85928 SP|Q40374|PR1_MEDTR Pathogenesis-related protein PR-1 precursor.
           [Barrel medic] {Medicago truncatula}, partial (92%)
          Length = 795

 Score = 61.6 bits (148), Expect(2) = 5e-21
 Identities = 26/46 (56%), Positives = 29/46 (62%)
 Frame = +1

Query: 130 CWHYTQVVWRKSKQVGCAQLTCVVDKLILTICFYDPPGNINGESPY 175
           C HYTQVVW  + +VGCA + C  DK     C YDPPGN  GE PY
Sbjct: 361 CGHYTQVVWGSTTKVGCASVVCSDDKGTFMTCNYDPPGNYYGERPY 498



 Score = 55.5 bits (132), Expect(2) = 5e-21
 Identities = 40/110 (36%), Positives = 58/110 (52%), Gaps = 5/110 (4%)
 Frame = +2

Query: 9   FSLALALFLLSAEAATVLDSVVPQLSAEAK----EFLDAHNWARAEVGVEPLEWSEALAK 64
           FS AL L LL+  +      +  + S +++    +FL   N ARA VG+ PL W + L  
Sbjct: 38  FSFALFLLLLTFISHVSASYIPNKKSFKSRSFKNQFLIPQNIARAAVGLRPLVWDDKLTH 217

Query: 65  DAGLFARYQRDRLGCKLANFSHNKYGSNQDLG-GMGWTPSVAVQDWVNEK 113
            A  +A  +R+   C L + S+  YG N   G G+GW P+ AV  WV+EK
Sbjct: 218 YAQWYANQRRN--DCALEH-SNGPYGENIFWGSGVGWNPAQAVSAWVDEK 358


>AJ311227 similar to PIR|H84518|H845 pathogenesis-related PR-1-like protein
           [imported] - Arabidopsis thaliana, partial (52%)
          Length = 379

 Score = 94.0 bits (232), Expect = 3e-20
 Identities = 44/97 (45%), Positives = 59/97 (60%)
 Frame = +2

Query: 79  CKLANFSHNKYGSNQDLGGMGWTPSVAVQDWVNEKEFYSYRTNSCVAPSFPCWHYTQVVW 138
           C++ + S   YG N   G    T + AV  W+ EK +Y+Y +NSC A  + C HYTQVVW
Sbjct: 5   CQMVH-SRGPYGENLAWGSGDITGTGAVNMWIGEKRYYNYNSNSCAA-GYQCGHYTQVVW 178

Query: 139 RKSKQVGCAQLTCVVDKLILTICFYDPPGNINGESPY 175
           R S +VGCA++ C   +  +  C YDPPGN NG+ PY
Sbjct: 179 RNSVRVGCAKVKCNNGRSTIISCNYDPPGNYNGQRPY 289


>TC86003 weakly similar to GP|7407641|gb|AAF62171.1| pathogenesis-related
           protein 1 {Betula pendula}, partial (95%)
          Length = 356

 Score = 65.5 bits (158), Expect = 1e-11
 Identities = 34/97 (35%), Positives = 53/97 (54%)
 Frame = +1

Query: 38  KEFLDAHNWARAEVGVEPLEWSEALAKDAGLFARYQRDRLGCKLANFSHNKYGSNQDLGG 97
           +++L  HN AR++VGV P+ W   +A  A  +    + +  CK+ + S   YG N     
Sbjct: 55  QDYLKIHNKARSDVGVGPISWDAKVASYAETYVN--KLKANCKMVH-SKGPYGENLAWSS 225

Query: 98  MGWTPSVAVQDWVNEKEFYSYRTNSCVAPSFPCWHYT 134
              T + AV  W+ EK++Y+Y +NSC A  + C HYT
Sbjct: 226 GDMTGTAAVTMWIGEKKYYNYNSNSC-AVGYQCGHYT 333


>BQ148878 weakly similar to GP|4928711|gb|A PR1a precursor {Glycine max},
           partial (44%)
          Length = 450

 Score = 57.8 bits (138), Expect = 2e-09
 Identities = 29/71 (40%), Positives = 39/71 (54%)
 Frame = +2

Query: 105 AVQDWVNEKEFYSYRTNSCVAPSFPCWHYTQVVWRKSKQVGCAQLTCVVDKLILTICFYD 164
           AV+ W +EK  +    N C      C H+TQVVW  S ++GC ++ C      +T C Y 
Sbjct: 119 AVKGWADEKPHFDNYLNKCFDGE--CHHFTQVVWSGSLRLGCGKVKCNNGGTFVT-CNYY 289

Query: 165 PPGNINGESPY 175
           PPGNI G+ PY
Sbjct: 290 PPGNIPGQLPY 322


>AJ497635 similar to GP|688429|dbj|B tumor-related protein {Nicotiana glauca
           x Nicotiana langsdorffii}, partial (22%)
          Length = 445

 Score = 28.5 bits (62), Expect(2) = 0.071
 Identities = 11/19 (57%), Positives = 12/19 (62%)
 Frame = +2

Query: 130 CWHYTQVVWRKSKQVGCAQ 148
           C HYTQVVW  +KQ    Q
Sbjct: 5   CRHYTQVVWSNTKQTWLCQ 61



 Score = 23.1 bits (48), Expect(2) = 0.071
 Identities = 8/13 (61%), Positives = 9/13 (68%)
 Frame = +1

Query: 163 YDPPGNINGESPY 175
           Y PPGN  G+ PY
Sbjct: 103 YYPPGNYVGDKPY 141


>TC81918 similar to GP|21594031|gb|AAM65949.1 unknown {Arabidopsis
           thaliana}, partial (78%)
          Length = 1051

 Score = 32.3 bits (72), Expect = 0.099
 Identities = 16/38 (42%), Positives = 19/38 (49%)
 Frame = +3

Query: 109 WVNEKEFYSYRTNSCVAPSFPCWHYTQVVWRKSKQVGC 146
           W  E+ F+ Y    C   S PC HY+ V  R  K VGC
Sbjct: 588 WTQERCFFEYYQKDC*V-SMPCRHYSPVY*RGFK*VGC 698


>BF650485 similar to GP|21594012|gb|A unknown {Arabidopsis thaliana}, partial
           (76%)
          Length = 525

 Score = 29.6 bits (65), Expect = 0.64
 Identities = 13/31 (41%), Positives = 16/31 (50%)
 Frame = +1

Query: 116 YSYRTNSCVAPSFPCWHYTQVVWRKSKQVGC 146
           Y  +TNSC+  S PCW Y+ V        GC
Sbjct: 91  YGSKTNSCIK-SHPCWRYSGVC*NSRCNEGC 180


>TC77382 similar to GP|14517512|gb|AAK62646.1 AT4g37300/C7A10_60
           {Arabidopsis thaliana}, partial (17%)
          Length = 1044

 Score = 29.6 bits (65), Expect = 0.64
 Identities = 28/113 (24%), Positives = 43/113 (37%), Gaps = 4/113 (3%)
 Frame = +3

Query: 55  PLEWSEALAKDA-GLFARYQRDRLGCKLANFSHNKYGSNQDLGGMGWTPSVAVQDWVNEK 113
           P   S +L K    L   +Q D      AN  HNK            TP      + + K
Sbjct: 66  PRNKSRSLIKSKLNLML*HQNDPSNPTEANLKHNK---------TSLTPLFLHTTYKSLK 218

Query: 114 EFYSYRTNSCVAPSFPC---WHYTQVVWRKSKQVGCAQLTCVVDKLILTICFY 163
            F  +  N  +   FP    W +   +W++S    C QL   + + ++ +CFY
Sbjct: 219 NFNLF--NQILKLYFPQRD*WIHKMSLWKQSITKSCCQLINNITRFVVLLCFY 371


>TC76791 similar to GP|21311555|gb|AAM46778.1 15.8 kDa oleosin {Theobroma
           cacao}, partial (64%)
          Length = 933

 Score = 29.3 bits (64), Expect = 0.83
 Identities = 15/50 (30%), Positives = 28/50 (56%)
 Frame = +3

Query: 117 SYRTNSCVAPSFPCWHYTQVVWRKSKQVGCAQLTCVVDKLILTICFYDPP 166
           SY ++SC +P   CW +  V+W     + C+  +C+V  + + +C + PP
Sbjct: 342 SYPSSSCYSPITHCW-WLYVLW----WLWCSCYSCIV--MDIQLCLW*PP 470


>TC79586 similar to SP|P52425|GPDA_CUPLA Glycerol-3-phosphate dehydrogenase
            [NAD+] (EC 1.1.1.8). {Cuphea lanceolata}, partial (92%)
          Length = 1521

 Score = 28.9 bits (63), Expect = 1.1
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = -3

Query: 7    PFFSLALALFLLSAEAATVLDSVVPQLSAEAKEFLDAHN 45
            PFF+ A A FL       V+ S  PQLS +     D +N
Sbjct: 1093 PFFA*ASATFLFLPPKQVVIRSATPQLSKKVLSLTDGNN 977


>BF644406 similar to GP|13560653|gb| pathogenesis-related protein PR-1
           precursor {Capsicum annuum}, partial (25%)
          Length = 293

 Score = 28.9 bits (63), Expect = 1.1
 Identities = 18/62 (29%), Positives = 30/62 (48%)
 Frame = +1

Query: 13  LALFLLSAEAATVLDSVVPQLSAEAKEFLDAHNWARAEVGVEPLEWSEALAKDAGLFARY 72
           LAL L+    A   +S          ++++AHN AR +VGV  + W   +A  A  +A  
Sbjct: 118 LALLLVIGHVANAQNS--------RADYVNAHNDARRQVGVGDIVWDNTVASFAQDYANQ 273

Query: 73  QR 74
           ++
Sbjct: 274 RK 279


>TC79716 weakly similar to SP|O24495|GL2M_ARATH Hydroxyacylglutathione
           hydrolase  mitochondrial precursor (EC 3.1.2.6)
           (Glyoxalase II) (Glx II)., partial (94%)
          Length = 1241

 Score = 28.1 bits (61), Expect = 1.9
 Identities = 8/30 (26%), Positives = 17/30 (56%)
 Frame = -3

Query: 137 VWRKSKQVGCAQLTCVVDKLILTICFYDPP 166
           +W++ +++GC    C+V+  +   C   PP
Sbjct: 93  IWKEREEMGCH*FNCLVENEVAFFCLPPPP 4


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.321    0.135    0.435 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,623,306
Number of Sequences: 36976
Number of extensions: 102997
Number of successful extensions: 536
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 511
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 512
length of query: 175
length of database: 9,014,727
effective HSP length: 90
effective length of query: 85
effective length of database: 5,686,887
effective search space: 483385395
effective search space used: 483385395
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)


Lotus: description of TM0323a.10