BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0321.10
(241 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC77523 homologue to GP|9954112|gb|AAG08959.1| tuber-specific an... 274 3e-74
TC86578 similar to PIR|C85440|C85440 myb-related protein [import... 273 3e-74
TC81527 similar to GP|9954116|gb|AAG08961.1| tuber-specific and ... 179 7e-46
AW692523 similar to GP|9954116|gb| tuber-specific and sucrose-re... 170 5e-43
TC84123 similar to PIR|T47712|T47712 MYB transcription factor-li... 159 9e-40
TC79672 similar to GP|6979341|gb|AAF34434.1| myb-like protein {O... 132 2e-31
BF643814 similar to GP|19386839|db putative myb-related protein ... 123 6e-29
BF644787 similar to GP|11994692|db MYB-like DNA-binding domain p... 115 2e-26
TC86588 similar to GP|5139814|dbj|BAA81736.1 GmMYB29B2 {Glycine ... 114 4e-26
TC78268 weakly similar to PIR|B85064|B85064 MYB-like protein [im... 113 6e-26
TC81520 similar to PIR|D86470|D86470 hypothetical protein AAD460... 112 1e-25
BG448527 similar to PIR|T51509|T51 probable transcription factor... 112 1e-25
BG644406 homologue to PIR|T07398|T07 myb-related transcription f... 112 2e-25
TC89556 similar to GP|18419456|gb|AAL69334.1 blind {Lycopersicon... 112 2e-25
TC82831 similar to PIR|T51650|T51650 probable transcription fact... 112 2e-25
BF647428 homologue to PIR|T51621|T51 myb-like protein [imported]... 110 5e-25
TC77877 similar to GP|5139806|dbj|BAA81732.1 GmMYB29A2 {Glycine ... 110 6e-25
TC88523 similar to PIR|T05690|T05690 myb-related transcription f... 110 6e-25
TC78267 weakly similar to PIR|B85064|B85064 MYB-like protein [im... 109 8e-25
TC90505 similar to GP|3941528|gb|AAC83640.1| putative transcript... 108 1e-24
>TC77523 homologue to GP|9954112|gb|AAG08959.1| tuber-specific and
sucrose-responsive element binding factor {Solanum
tuberosum}, partial (43%)
Length = 1513
Score = 274 bits (700), Expect = 3e-74
Identities = 159/315 (50%), Positives = 190/315 (59%), Gaps = 75/315 (23%)
Frame = +2
Query: 1 MDRVKGPWSPEEDEALTRLVQVHGPKNWTAISKSIPGRSGKSCRLRWCNQLSPEVEHRPF 60
MDR+KGPWSPEEDEAL +LV+ HGP+NW+ ISKSIPGRSGKSCRLRWCNQLSP+VEHR F
Sbjct: 215 MDRIKGPWSPEEDEALQKLVEKHGPRNWSIISKSIPGRSGKSCRLRWCNQLSPQVEHRAF 394
Query: 61 TPEEDSAIIRAHARFGNKWATIARILNGRTDNAVKNHWNSTLKRKCSA--VDTAVDHRPL 118
TPEED IIRAHARFGNKWATIAR+L+GRTDNA+KNHWNSTLKRKCS+ +D + + PL
Sbjct: 395 TPEEDDTIIRAHARFGNKWATIARLLSGRTDNAIKNHWNSTLKRKCSSIMIDDS-ESPPL 571
Query: 119 KRSASVGA----------GCLNPSSPTGSAMSDPGPPAA---ISTDAPIAVPAAVVVP-- 163
KRS S GA +P SP+GS +S+ P +++ VP V P
Sbjct: 572 KRSVSAGAAIPVSTGLYINANSPGSPSGSDVSESSVPIVNTHVNSHVYRPVPTRTVAPLP 751
Query: 164 ---------ATDPATSLSLSLP--GFDSSG------------------------------ 182
+ DP TSLSLSLP G DSS
Sbjct: 752 LVETTSPSNSNDPPTSLSLSLPGVGVDSSSEDSNRVTEPVNTAPPPPPPPPPSAIPLMPV 931
Query: 183 ---------------SGSGSKQLFGAEFLAVMQEMIRKEVRSYMSGMEEKNGACM--PAE 225
SGS F AE L+VMQEMIR EVRSYM+G+E++NG C +
Sbjct: 932 MTTAVPVPMAVPMQQSGSVMPFSFSAELLSVMQEMIRTEVRSYMAGLEQQNGMCFQKAED 1111
Query: 226 AIGNAVMKRMGISNV 240
I NA++KR+GIS +
Sbjct: 1112GIRNALVKRIGISRI 1156
>TC86578 similar to PIR|C85440|C85440 myb-related protein [imported] -
Arabidopsis thaliana, partial (42%)
Length = 1283
Score = 273 bits (699), Expect = 3e-74
Identities = 153/277 (55%), Positives = 184/277 (66%), Gaps = 37/277 (13%)
Frame = +2
Query: 1 MDRVKGPWSPEEDEALTRLVQVHGPKNWTAISKSIPGRSGKSCRLRWCNQLSPEVEHRPF 60
MDR+KGPWSPEEDE+LT+LV +GP+NW+ IS++IPGRSGKSCRLRWCNQLSP+VEHR F
Sbjct: 56 MDRIKGPWSPEEDESLTKLVDRYGPRNWSLISRAIPGRSGKSCRLRWCNQLSPQVEHRAF 235
Query: 61 TPEEDSAIIRAHARFGNKWATIARILNGRTDNAVKNHWNSTLKRKCSAV----DTAVDHR 116
+PEED+ IIRAHA+FGNKWATIAR+L+GRTDNA+KNHWNSTLKRKCS+ D + +
Sbjct: 236 SPEEDNIIIRAHAQFGNKWATIARLLSGRTDNAIKNHWNSTLKRKCSSFIGSDDRDFNPQ 415
Query: 117 PLKRSASVGAGCLNPSSPTGSAMSDPGPPAAISTDAPIAVPA-------AVVVPAT---- 165
PLKRSASVGA P SP+GS +SD G + PI +P V VP
Sbjct: 416 PLKRSASVGA----PGSPSGSDLSDSGVQQTVFRPVPIRLPVETTSEPEPVTVPEAVEED 583
Query: 166 -DPATSLSLSLPGFD--------------------SSGSGSGSKQLFGAEFLAVMQEMIR 204
P TSLSLSLPG D S +G G+ L G EF+AVMQEMI+
Sbjct: 584 DGPLTSLSLSLPGVDAAAAVLVSPAPITAVTAVTVSEEAGIGALNLSG-EFMAVMQEMIK 760
Query: 205 KEVRSYMSGMEEKNGACMP-AEAIGNAVMKRMGISNV 240
EVRSY MEE+NG C + + N K +GI+ V
Sbjct: 761 NEVRSY---MEERNGMCFQGVDRLRNVSAKPIGINRV 862
>TC81527 similar to GP|9954116|gb|AAG08961.1| tuber-specific and
sucrose-responsive element binding factor {Solanum
tuberosum}, partial (56%)
Length = 765
Score = 179 bits (455), Expect = 7e-46
Identities = 104/227 (45%), Positives = 127/227 (55%), Gaps = 7/227 (3%)
Frame = +2
Query: 1 MDRVKGPWSPEEDEALTRLVQVHGPKNWTAISKSIPGRSGKSCRLRWCNQLSPEVEHRPF 60
+DR+KGPWS EED LTRLV+ HG +NW+ IS+ I GRSGKSCRLRWCNQLSP VEHRPF
Sbjct: 143 LDRIKGPWSAEEDRILTRLVEQHGARNWSLISRYIKGRSGKSCRLRWCNQLSPTVEHRPF 322
Query: 61 TPEEDSAIIRAHARFGNKWATIARILNGRTDNAVKNHWNSTLKRKCSAVDTAVDHRPLKR 120
+ +ED II AHA++GN+WATIAR+L GRTDNAVKNHWNSTLKR+
Sbjct: 323 SSQEDETIIAAHAQYGNRWATIARLLPGRTDNAVKNHWNSTLKRR--------------- 457
Query: 121 SASVGAGCLNPSSPTGSAMSDPGPPAAISTDAPIAVPAAVVVPATDPATSLSLSLPGFDS 180
AGC GS G P+ DP T+L+L+ PG
Sbjct: 458 -----AGC------GGSVTVAGGGNEGGQFTFPL---------EDDPLTALTLAPPGNGV 577
Query: 181 SGSGS-------GSKQLFGAEFLAVMQEMIRKEVRSYMSGMEEKNGA 220
S + EF VM+ +I +EVR Y+S N +
Sbjct: 578 EDREEMVGDHRFPSPENVPTEFWDVMRGVIAREVREYVSSNFSHNSS 718
>AW692523 similar to GP|9954116|gb| tuber-specific and sucrose-responsive
element binding factor {Solanum tuberosum}, partial
(39%)
Length = 660
Score = 170 bits (430), Expect = 5e-43
Identities = 77/112 (68%), Positives = 90/112 (79%)
Frame = +1
Query: 2 DRVKGPWSPEEDEALTRLVQVHGPKNWTAISKSIPGRSGKSCRLRWCNQLSPEVEHRPFT 61
D+VKG WS EDE L +LV+ +G +NW+ IS IPGRSGKSCRLRWCNQLSP V+H PFT
Sbjct: 235 DKVKGSWSKTEDETLVKLVKENGARNWSVISNEIPGRSGKSCRLRWCNQLSPTVQHLPFT 414
Query: 62 PEEDSAIIRAHARFGNKWATIARILNGRTDNAVKNHWNSTLKRKCSAVDTAV 113
P EDS II AHA GNKWATI+R+L GRTDNA+KNHWNSTL+R+ +A AV
Sbjct: 415 PAEDSIIIEAHAVHGNKWATISRLLPGRTDNAIKNHWNSTLRRRRTAAPAAV 570
>TC84123 similar to PIR|T47712|T47712 MYB transcription factor-like protein
- Arabidopsis thaliana, partial (27%)
Length = 682
Score = 159 bits (402), Expect = 9e-40
Identities = 70/103 (67%), Positives = 83/103 (79%)
Frame = +1
Query: 3 RVKGPWSPEEDEALTRLVQVHGPKNWTAISKSIPGRSGKSCRLRWCNQLSPEVEHRPFTP 62
+VKGPWSPEED L+RLV G +NW+ I++ I GRSGKSCRLRWCNQL P V+ +PFT
Sbjct: 199 KVKGPWSPEEDAILSRLVSQFGARNWSLIARGIAGRSGKSCRLRWCNQLDPSVKRKPFTD 378
Query: 63 EEDSAIIRAHARFGNKWATIARILNGRTDNAVKNHWNSTLKRK 105
EED I+ AHA GNKWA IAR+L GRTDNA+KNHWNSTL+R+
Sbjct: 379 EEDRIIVAAHAIHGNKWAAIARLLPGRTDNAIKNHWNSTLRRR 507
>TC79672 similar to GP|6979341|gb|AAF34434.1| myb-like protein {Oryza
sativa}, partial (46%)
Length = 1391
Score = 132 bits (331), Expect = 2e-31
Identities = 57/101 (56%), Positives = 73/101 (71%)
Frame = +2
Query: 5 KGPWSPEEDEALTRLVQVHGPKNWTAISKSIPGRSGKSCRLRWCNQLSPEVEHRPFTPEE 64
+G W P EDE L +LV+ +G +NW +I++ + GRSGKSCRLRW NQL P + RPFT EE
Sbjct: 185 RGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQGRSGKSCRLRWFNQLDPRINRRPFTEEE 364
Query: 65 DSAIIRAHARFGNKWATIARILNGRTDNAVKNHWNSTLKRK 105
+ ++ AH GNKWA IAR+ GRTDNAVKNHW+ + RK
Sbjct: 365 EERLLAAHRIHGNKWALIARLFPGRTDNAVKNHWHVIMARK 487
>BF643814 similar to GP|19386839|db putative myb-related protein {Oryza
sativa (japonica cultivar-group)}, partial (49%)
Length = 545
Score = 123 bits (309), Expect = 6e-29
Identities = 69/172 (40%), Positives = 94/172 (54%), Gaps = 2/172 (1%)
Frame = +1
Query: 5 KGPWSPEEDEALTRLVQVHGPKNWTAISKSIP-GRSGKSCRLRWCNQLSPEVEHRPFTPE 63
KG WS EEDE L ++ G W ++ K+ R GKSCRLRW N L P+++ FT E
Sbjct: 28 KGAWSKEEDERLINYIKQQGEGCWRSLPKAAGLARCGKSCRLRWINYLRPDLKRGNFTHE 207
Query: 64 EDSAIIRAHARFGNKWATIARILNGRTDNAVKNHWNSTLKRKC-SAVDTAVDHRPLKRSA 122
ED II HA GNKW+ IA+ L GRTDN +KN+WN+ +KRK S H+PLK +
Sbjct: 208 EDELIISLHAMVGNKWSQIAQKLPGRTDNEIKNYWNTHIKRKLYSRGIDPTTHQPLKTLS 387
Query: 123 SVGAGCLNPSSPTGSAMSDPGPPAAISTDAPIAVPAAVVVPATDPATSLSLS 174
A SS T ++ P ++ + P+ VV + +TS S+S
Sbjct: 388 GTAAASTGTSSATTTSAEAASPTMVVNNNPPV---FPVVASNNESSTSSSMS 534
>BF644787 similar to GP|11994692|db MYB-like DNA-binding domain protein
{Arabidopsis thaliana}, partial (53%)
Length = 682
Score = 115 bits (287), Expect = 2e-26
Identities = 51/103 (49%), Positives = 73/103 (70%), Gaps = 2/103 (1%)
Frame = +3
Query: 5 KGPWSPEEDEALTRLVQVHGPKNWTAISKSIPG--RSGKSCRLRWCNQLSPEVEHRPFTP 62
KGPW+ EED L V++HG W ++++ + G R+GKSCRLRW N L P+++ TP
Sbjct: 234 KGPWTAEEDRLLIDYVRLHGEGRWNSVAR-LTGLKRNGKSCRLRWVNYLRPDLKRGQITP 410
Query: 63 EEDSAIIRAHARFGNKWATIARILNGRTDNAVKNHWNSTLKRK 105
+E+S I+ HAR+GN+W+TIAR L GRTDN +KN+W + K+K
Sbjct: 411 QEESIILELHARWGNRWSTIARSLPGRTDNEIKNYWRTHFKKK 539
>TC86588 similar to GP|5139814|dbj|BAA81736.1 GmMYB29B2 {Glycine max},
partial (85%)
Length = 1389
Score = 114 bits (284), Expect = 4e-26
Identities = 59/126 (46%), Positives = 79/126 (61%), Gaps = 7/126 (5%)
Frame = +2
Query: 5 KGPWSPEEDEALTRLVQVHGPKNWTAISKSIPG--RSGKSCRLRWCNQLSPEVEHRPFTP 62
+GPWS EEDE LT +Q HG NW A+ K + G R GKSCRLRW N L P+++ FT
Sbjct: 146 RGPWSLEEDEILTSYIQKHGHGNWRALPK-LAGLLRCGKSCRLRWINYLRPDIKRGNFTN 322
Query: 63 EEDSAIIRAHARFGNKWATIARILNGRTDNAVKNHWNSTLKRKCSAVDT-----AVDHRP 117
EE+ II+ H GN+W+ IA L GRTDN +KN W++ LK+K + ++ A+
Sbjct: 323 EEEENIIKLHEMLGNRWSAIAAKLPGRTDNEIKNVWHTHLKKKLNQTNSEAKKKAISKPK 502
Query: 118 LKRSAS 123
+KRS S
Sbjct: 503 IKRSDS 520
>TC78268 weakly similar to PIR|B85064|B85064 MYB-like protein [imported] -
Arabidopsis thaliana, partial (35%)
Length = 888
Score = 113 bits (283), Expect = 6e-26
Identities = 62/153 (40%), Positives = 86/153 (55%), Gaps = 2/153 (1%)
Frame = +1
Query: 5 KGPWSPEEDEALTRLVQVHGPKNWTAISKSIP-GRSGKSCRLRWCNQLSPEVEHRPFTPE 63
KG W+ EED L V +G NW + K R GKSCRLRW N L P ++ FT E
Sbjct: 124 KGTWTAEEDRKLIAYVTRYGCWNWRQLPKFAGLSRCGKSCRLRWLNYLRPNIKRGNFTQE 303
Query: 64 EDSAIIRAHARFGNKWATIARILNGRTDNAVKNHWNSTLKRKCSAVDTAVDHRPLKRSAS 123
E+ IIR H + GN+W+TIA L GRTDN VKNHW+++LK++ A+D V + K +
Sbjct: 304 EEELIIRMHKKLGNRWSTIAAELPGRTDNEVKNHWHTSLKKR--AIDNIVTNEETKSTQG 477
Query: 124 VGAGCLNPSSPTGSAMSDP-GPPAAISTDAPIA 155
+ P S +SD GP + S+ + ++
Sbjct: 478 RCVSNYQITLPANSQISDTNGPLSPFSSSSELS 576
>TC81520 similar to PIR|D86470|D86470 hypothetical protein AAD46010.1
[imported] - Arabidopsis thaliana, partial (39%)
Length = 1259
Score = 112 bits (281), Expect = 1e-25
Identities = 51/102 (50%), Positives = 67/102 (65%), Gaps = 1/102 (0%)
Frame = +2
Query: 5 KGPWSPEEDEALTRLVQVHGPKNWTAISKSIP-GRSGKSCRLRWCNQLSPEVEHRPFTPE 63
KGPW+PEED+ L +Q HG +W A+ K R GKSCRLRW N L P+++ F+ E
Sbjct: 95 KGPWTPEEDQKLVEHIQQHGHGSWRALPKLAGLNRCGKSCRLRWTNYLRPDIKRGKFSQE 274
Query: 64 EDSAIIRAHARFGNKWATIARILNGRTDNAVKNHWNSTLKRK 105
E+ I+ H+ GNKW+ IA L GRTDN +KN WN+ LK+K
Sbjct: 275 EEQTILHLHSILGNKWSAIATHLPGRTDNEIKNFWNTHLKKK 400
Score = 34.7 bits (78), Expect = 0.034
Identities = 18/61 (29%), Positives = 31/61 (50%)
Frame = +2
Query: 2 DRVKGPWSPEEDEALTRLVQVHGPKNWTAISKSIPGRSGKSCRLRWCNQLSPEVEHRPFT 61
D +G +S EE++ + L + G K W+AI+ +PGR+ + W L ++ F
Sbjct: 245 DIKRGKFSQEEEQTILHLHSILGNK-WSAIATHLPGRTDNEIKNFWNTHLKKKLIQMGFD 421
Query: 62 P 62
P
Sbjct: 422 P 424
>BG448527 similar to PIR|T51509|T51 probable transcription factor (MYB9) -
Arabidopsis thaliana, partial (40%)
Length = 633
Score = 112 bits (280), Expect = 1e-25
Identities = 51/102 (50%), Positives = 66/102 (64%), Gaps = 1/102 (0%)
Frame = +1
Query: 5 KGPWSPEEDEALTRLVQVHGPKNWTAISKSIP-GRSGKSCRLRWCNQLSPEVEHRPFTPE 63
KGPW+ EEDE L + HG NW +SK R GKSCRLRW N L P+++ FT E
Sbjct: 79 KGPWTQEEDEKLIDYINKHGHGNWGTLSKRAGLNRCGKSCRLRWTNYLRPDIKRGKFTDE 258
Query: 64 EDSAIIRAHARFGNKWATIARILNGRTDNAVKNHWNSTLKRK 105
E+ II H+ GNKW+ IA L GRTDN +KN+WN+ +++K
Sbjct: 259 EERVIINLHSVLGNKWSKIAAHLPGRTDNEIKNYWNTNIRKK 384
>BG644406 homologue to PIR|T07398|T07 myb-related transcription factor THM6 -
tomato, partial (42%)
Length = 762
Score = 112 bits (279), Expect = 2e-25
Identities = 54/113 (47%), Positives = 71/113 (62%), Gaps = 5/113 (4%)
Frame = +1
Query: 5 KGPWSPEEDEALTRLVQVHGPKNWTAISKSIPGRSG-----KSCRLRWCNQLSPEVEHRP 59
KGPW+PEED L VQ HGP NW +++P +G KSCRLRW N L P ++
Sbjct: 184 KGPWTPEEDIMLVSFVQEHGPGNW----RTVPTHTGLRRCSKSCRLRWTNYLRPGIKRGS 351
Query: 60 FTPEEDSAIIRAHARFGNKWATIARILNGRTDNAVKNHWNSTLKRKCSAVDTA 112
FT +E+ II+ A GNKWA IA L RTDN +KN+WN+ LK+K ++T+
Sbjct: 352 FTDQEEKMIIQLQALLGNKWAAIASYLPERTDNDIKNYWNTHLKKKLKKLETS 510
>TC89556 similar to GP|18419456|gb|AAL69334.1 blind {Lycopersicon
esculentum}, partial (37%)
Length = 990
Score = 112 bits (279), Expect = 2e-25
Identities = 53/115 (46%), Positives = 72/115 (62%), Gaps = 2/115 (1%)
Frame = +3
Query: 5 KGPWSPEEDEALTRLVQVHGPK-NWTAISKSIP-GRSGKSCRLRWCNQLSPEVEHRPFTP 62
KGPWSPEED L ++ HG NW + K + R GKSCRLRW N L P ++H F+
Sbjct: 57 KGPWSPEEDAKLKEYIEKHGTGGNWITLPKKVGLTRCGKSCRLRWLNYLRPNIKHGEFSD 236
Query: 63 EEDSAIIRAHARFGNKWATIARILNGRTDNAVKNHWNSTLKRKCSAVDTAVDHRP 117
ED I A G++W+ IA L GRTDN VKN+WN+ LK+K +++ +V+ +P
Sbjct: 237 SEDKIICTLFASIGSRWSIIASKLEGRTDNDVKNYWNTKLKKKIMSMNHSVEMKP 401
>TC82831 similar to PIR|T51650|T51650 probable transcription factor MYB36
[imported] - Arabidopsis thaliana, partial (34%)
Length = 940
Score = 112 bits (279), Expect = 2e-25
Identities = 53/104 (50%), Positives = 68/104 (64%), Gaps = 3/104 (2%)
Frame = +2
Query: 5 KGPWSPEEDEALTRLVQVHGPK-NWTAISKSIPG--RSGKSCRLRWCNQLSPEVEHRPFT 61
+GPWSPEED L +Q HG NW A+ K I G R GKSCRLRW N L P ++H F+
Sbjct: 2 RGPWSPEEDSKLKAYIQQHGTGGNWIALPKKIVGLKRCGKSCRLRWLNYLRPNLKHGSFS 181
Query: 62 PEEDSAIIRAHARFGNKWATIARILNGRTDNAVKNHWNSTLKRK 105
EED+ I + G++W+ IA L GRTDN +KN+WN+ LK+K
Sbjct: 182 EEEDNIICSLYVNIGSRWSIIAAQLPGRTDNDIKNYWNTKLKKK 313
>BF647428 homologue to PIR|T51621|T51 myb-like protein [imported] -
Arabidopsis thaliana, partial (44%)
Length = 689
Score = 110 bits (275), Expect = 5e-25
Identities = 52/109 (47%), Positives = 68/109 (61%), Gaps = 1/109 (0%)
Frame = +2
Query: 5 KGPWSPEEDEALTRLVQVHGPKNWTAISKSIPG-RSGKSCRLRWCNQLSPEVEHRPFTPE 63
KGPW+PEED L +Q HGP NW A+ + R KSCRLRW N L P ++ FT +
Sbjct: 131 KGPWTPEEDIILVSYIQEHGPGNWKAVPTNTGLLRCSKSCRLRWTNYLRPGIKRGNFTDQ 310
Query: 64 EDSAIIRAHARFGNKWATIARILNGRTDNAVKNHWNSTLKRKCSAVDTA 112
E+ II A GN+WA IA L RTDN +KN+WN+ LK+K ++T+
Sbjct: 311 EEKMIIHLQALLGNRWAAIAAYLPQRTDNDIKNYWNTYLKKKLKKLETS 457
>TC77877 similar to GP|5139806|dbj|BAA81732.1 GmMYB29A2 {Glycine max},
partial (78%)
Length = 1156
Score = 110 bits (274), Expect = 6e-25
Identities = 60/144 (41%), Positives = 80/144 (54%), Gaps = 10/144 (6%)
Frame = +3
Query: 5 KGPWSPEEDEALTRLVQVHGPKNWTAISKSIPG-RSGKSCRLRWCNQLSPEVEHRPFTPE 63
KGPW+ EEDE LT + HG NW A+ K R GKSCRLRW N L P+++ FT E
Sbjct: 105 KGPWTLEEDEILTSYINKHGHSNWRALPKHAGLLRCGKSCRLRWINYLKPDIKRGNFTNE 284
Query: 64 EDSAIIRAHARFGNKWATIARILNGRTDNAVKNHWNSTLKRKC---------SAVDTAVD 114
E+ II+ H GN+W+ IA L GRTDN +KN W++ LK++ S V
Sbjct: 285 EEETIIKMHESLGNRWSAIAAKLPGRTDNEIKNVWHTHLKKRLLNTNNNQPNSNTKKRVS 464
Query: 115 HRPLKRSASVGAGCLNPSSPTGSA 138
+ +KRS S + S+ T S+
Sbjct: 465 KQKIKRSDSNSSTLTTASNCTFSS 536
>TC88523 similar to PIR|T05690|T05690 myb-related transcription factor MYB4
- Arabidopsis thaliana, partial (54%)
Length = 1292
Score = 110 bits (274), Expect = 6e-25
Identities = 62/154 (40%), Positives = 85/154 (54%), Gaps = 8/154 (5%)
Frame = +1
Query: 5 KGPWSPEEDEALTRLVQVHGPKNWTAISKSIPG-RSGKSCRLRWCNQLSPEVEHRPFTPE 63
KG W+ EED+ L ++ HG W ++ K+ R GKSCRLRW N L P+++ FT E
Sbjct: 310 KGAWTKEEDDRLISYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTEE 489
Query: 64 EDSAIIRAHARFGNKWATIARILNGRTDNAVKNHWNSTLKRKC--SAVDTAVDHRPL--- 118
ED II+ H+ GNKW+ IA L GRTDN +KN+WN+ ++RK +D A HRPL
Sbjct: 490 EDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLLNRGIDPAT-HRPLNEV 666
Query: 119 --KRSASVGAGCLNPSSPTGSAMSDPGPPAAIST 150
+S S N + T + + P A T
Sbjct: 667 SHSQSQSQTLHLQNQEAVTIAVAASTSTPTATKT 768
>TC78267 weakly similar to PIR|B85064|B85064 MYB-like protein [imported] -
Arabidopsis thaliana, partial (35%)
Length = 869
Score = 109 bits (273), Expect = 8e-25
Identities = 56/120 (46%), Positives = 72/120 (59%), Gaps = 1/120 (0%)
Frame = +2
Query: 5 KGPWSPEEDEALTRLVQVHGPKNWTAISKSIP-GRSGKSCRLRWCNQLSPEVEHRPFTPE 63
KG W+ EED L V +G NW + K R GKSCRLRW N L P + FT +
Sbjct: 134 KGTWTAEEDRKLIAYVTRYGFWNWRQLPKFAGLSRCGKSCRLRWLNYLRPNIRRGNFTKD 313
Query: 64 EDSAIIRAHARFGNKWATIARILNGRTDNAVKNHWNSTLKRKCSAVDTAVDHRPLKRSAS 123
E+ IIR H + GNKW+TIA L GRTDN VKNHW+++LK++ A+D V + K + S
Sbjct: 314 EEELIIRMHKKLGNKWSTIAAELPGRTDNEVKNHWHTSLKKR--AIDNIVTNEETKSTKS 487
>TC90505 similar to GP|3941528|gb|AAC83640.1| putative transcription factor
{Arabidopsis thaliana}, partial (49%)
Length = 984
Score = 108 bits (271), Expect = 1e-24
Identities = 52/108 (48%), Positives = 66/108 (60%), Gaps = 1/108 (0%)
Frame = +1
Query: 5 KGPWSPEEDEALTRLVQVHGPKNWTAI-SKSIPGRSGKSCRLRWCNQLSPEVEHRPFTPE 63
KGPW+PEED L +Q HGP NW A+ +K+ R KSCRLRW N L P ++ FT +
Sbjct: 196 KGPWTPEEDIILVTYIQEHGPGNWRAVPTKTGLSRCSKSCRLRWTNYLRPGIKRGNFTEQ 375
Query: 64 EDSAIIRAHARFGNKWATIARILNGRTDNAVKNHWNSTLKRKCSAVDT 111
E+ II GN+WA IA L RTDN +KN+WN+ LK+K T
Sbjct: 376 EEKMIIHLQDLLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKLKKSQT 519
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.314 0.129 0.387
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,833,256
Number of Sequences: 36976
Number of extensions: 95818
Number of successful extensions: 766
Number of sequences better than 10.0: 129
Number of HSP's better than 10.0 without gapping: 688
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 705
length of query: 241
length of database: 9,014,727
effective HSP length: 93
effective length of query: 148
effective length of database: 5,575,959
effective search space: 825241932
effective search space used: 825241932
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 57 (26.6 bits)
Lotus: description of TM0321.10