Lotus
BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0314.9
         (344 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC87928 similar to PIR|A96839|A96839 F23A5.2(form2) [imported] -...   672  0.0
TC87616 similar to PIR|A96839|A96839 F23A5.2(form2) [imported] -...   447  e-180
TC88590 similar to PIR|T52386|T52386 mitotic checkpoint protein ...   160  7e-40
TC85659 SP|O24076|GBLP_MEDSA Guanine nucleotide-binding protein ...    63  2e-10
BG647724 similar to GP|11141605|gb LEUNIG {Arabidopsis thaliana}...    58  6e-09
TC90611 similar to GP|10177223|dbj|BAB10298. contains similarity...    56  2e-08
TC89149 similar to GP|20466231|gb|AAM20433.1 cell cycle switch p...    55  5e-08
BG648991 similar to PIR|C86239|C86 protein T10O24.21 [imported] ...    54  9e-08
TC78188 similar to PIR|C84870|C84870 probable splicing factor [i...    54  1e-07
TC89922 weakly similar to GP|15912305|gb|AAL08286.1 AT4g18900/F1...    52  4e-07
TC88481 similar to PIR|T00806|T02445 probable U4/U6 small nuclea...    50  1e-06
BG586181 similar to GP|4689316|gb| peroxisomal targeting signal ...    49  3e-06
TC88475 similar to GP|20260442|gb|AAM13119.1 unknown protein {Ar...    48  5e-06
TC79362 WD-repeat cell cycle regulatory protein                        48  6e-06
TC79342 similar to GP|10177096|dbj|BAB10430. Notchless protein h...    47  8e-06
TC79118 similar to GP|16323188|gb|AAL15328.1 AT5g67320/K8K14_4 {...    47  1e-05
TC78679 similar to GP|20466538|gb|AAM20586.1 putative WD-repeat ...    46  2e-05
TC84162 similar to GP|15810485|gb|AAL07130.1 putative WD40-repea...    45  4e-05
CB893690 weakly similar to GP|9759025|dbj gene_id:K6A12.9~simila...    44  9e-05
TC82717 weakly similar to GP|21539583|gb|AAM53344.1 putative coa...    43  2e-04

>TC87928 similar to PIR|A96839|A96839 F23A5.2(form2) [imported] -
           Arabidopsis thaliana, partial (95%)
          Length = 1519

 Score =  672 bits (1734), Expect = 0.0
 Identities = 318/351 (90%), Positives = 331/351 (93%), Gaps = 7/351 (1%)
 Frame = +2

Query: 1   MSTFLSNT---NQNPNKSFEVNQPPSDSVSSLCFSPKANLLVATSWDNQVRCWEVAR--- 54
           MS FLSN    N NPNKS EVNQPP+DSVSSL FSPK+NLLVATSWDNQVRCWEVAR   
Sbjct: 161 MSNFLSNNTNPNPNPNKSIEVNQPPTDSVSSLNFSPKSNLLVATSWDNQVRCWEVARDGA 340

Query: 55  -NVATAPKASISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQPMTVAMHDAPVK 113
            NVAT PKASI+HD PVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQP+TVAMHDAP+K
Sbjct: 341 NNVATMPKASIAHDHPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQPITVAMHDAPIK 520

Query: 114 DIAWIPEMSLLVTGSWDRTIKYWDTRQPNPVHTQQLPERCYAMSVKHPLMVVGTADRNIL 173
           DIAWIPEM+LL TGSWD+ IKYWDTRQPNPVHTQQLPERCYAM+VKHPLMVVGTADRNI+
Sbjct: 521 DIAWIPEMNLLATGSWDKNIKYWDTRQPNPVHTQQLPERCYAMTVKHPLMVVGTADRNII 700

Query: 174 VYNLQNPQVEFKRIISPLKYQTRCLAAFPDQQGFLVGSIEGRVGVHHLDDSQQGKNFTFK 233
           VYNLQNPQVEFKRI+SPLKYQTRCLAAFPDQQGFLVGSIEGRVGVHHLDDSQQ KNFTFK
Sbjct: 701 VYNLQNPQVEFKRIVSPLKYQTRCLAAFPDQQGFLVGSIEGRVGVHHLDDSQQAKNFTFK 880

Query: 234 CHREGNEIYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAMLRCSQPIPCSAFNN 293
           CHREGNEIYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAMLRCSQP+PCSAFNN
Sbjct: 881 CHREGNEIYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAMLRCSQPVPCSAFNN 1060

Query: 294 DGSIFAYSVCYDWSKGAENHNPTTAKTNIYLHLPQESEVKGKPRIGATGRK 344
           DGSIFAYSVCYDWSKGAENHNP TAK  I+LHLPQESEVKGKPRIGATGR+
Sbjct: 1061DGSIFAYSVCYDWSKGAENHNPATAKPYIFLHLPQESEVKGKPRIGATGRR 1213


>TC87616 similar to PIR|A96839|A96839 F23A5.2(form2) [imported] -
           Arabidopsis thaliana, partial (96%)
          Length = 1471

 Score =  447 bits (1151), Expect(2) = e-180
 Identities = 208/253 (82%), Positives = 231/253 (91%), Gaps = 4/253 (1%)
 Frame = +3

Query: 1   MSTF-LSNTNQNPNKSFEVNQPPSDSVSSLCFSPKANLLVATSWDNQVRCWEVARN---V 56
           MS+F  +NTN NPNKS+EV+QPP+DS+SSL FSPKAN LVATSWDNQVRCWE+A+N   V
Sbjct: 129 MSSFGAANTNTNPNKSYEVSQPPTDSISSLSFSPKANFLVATSWDNQVRCWEIAKNGTVV 308

Query: 57  ATAPKASISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQPMTVAMHDAPVKDIA 116
            + PKASISHDQPVLCSAWKDDGTTVFSGGCDKQ KMWPLLSGGQP+TVAMHDAP+K+IA
Sbjct: 309 TSTPKASISHDQPVLCSAWKDDGTTVFSGGCDKQAKMWPLLSGGQPVTVAMHDAPIKEIA 488

Query: 117 WIPEMSLLVTGSWDRTIKYWDTRQPNPVHTQQLPERCYAMSVKHPLMVVGTADRNILVYN 176
           WIPEMSLL TGS D+T+KYWDTRQ NPVHTQQLP+RCY MSV+HPLMVVGTADRN++V+N
Sbjct: 489 WIPEMSLLATGSLDKTVKYWDTRQSNPVHTQQLPDRCYTMSVRHPLMVVGTADRNLIVFN 668

Query: 177 LQNPQVEFKRIISPLKYQTRCLAAFPDQQGFLVGSIEGRVGVHHLDDSQQGKNFTFKCHR 236
           LQNPQ E+KRI+SPLKYQTRC+AAFPDQQGFLVGSIEGRVGVHHLDD+QQ KNFTFKCHR
Sbjct: 669 LQNPQTEYKRIVSPLKYQTRCVAAFPDQQGFLVGSIEGRVGVHHLDDAQQSKNFTFKCHR 848

Query: 237 EGNEIYSVNSLNF 249
           E NEIYS   L F
Sbjct: 849 ESNEIYSGQLLKF 887



 Score =  201 bits (511), Expect(2) = e-180
 Identities = 90/101 (89%), Positives = 95/101 (93%)
 Frame = +1

Query: 244 VNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAMLRCSQPIPCSAFNNDGSIFAYSVC 303
           VNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAM RCSQPIPC  FNNDGSI+AY+VC
Sbjct: 871 VNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAMQRCSQPIPCGTFNNDGSIYAYAVC 1050

Query: 304 YDWSKGAENHNPTTAKTNIYLHLPQESEVKGKPRIGATGRK 344
           YDWSKGAENHNPTTAK  IY+HLPQESEVKGKPR G+TGR+
Sbjct: 1051YDWSKGAENHNPTTAKNYIYMHLPQESEVKGKPRAGSTGRR 1173



 Score = 28.9 bits (63), Expect = 3.0
 Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 5/59 (8%)
 Frame = +3

Query: 243 SVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRL-----KAMLRCSQPIPCSAFNNDGS 296
           S++SL+F P  +       D     W+      +     KA +   QP+ CSA+ +DG+
Sbjct: 204 SISSLSFSPKANFLVATSWDNQVRCWEIAKNGTVVTSTPKASISHDQPVLCSAWKDDGT 380


>TC88590 similar to PIR|T52386|T52386 mitotic checkpoint protein [imported]
           - Arabidopsis thaliana, complete
          Length = 1395

 Score =  160 bits (405), Expect = 7e-40
 Identities = 96/267 (35%), Positives = 143/267 (52%), Gaps = 25/267 (9%)
 Frame = +2

Query: 96  LLSGGQPMTV--AMHDAPVKDIAWIPEMSLLVT------------GSWDRTIKYWDTR-- 139
           L+S   P+T+  A    PVK I W   M L V             GSWD+TIK WD R  
Sbjct: 302 LVSVPPPITLSDASFSLPVKRIFWESMMLLFVVLSTLTPQGN*SPGSWDKTIKCWDPRGA 481

Query: 140 ---QPNPVHTQQLPERCYAMSVKHPLMVVGTADRNILVYNLQNPQVEFKRIISPLKYQTR 196
              +   V T   PER Y++S+    +VV TA R++ VY+++N     +R  S LKYQTR
Sbjct: 482 SGQERTLVGTYAQPERVYSLSLVGHRLVVATAGRHVNVYDMRNMSCPEQRRESSLKYQTR 661

Query: 197 CLAAFPDQQGFLVGSIEGRVGVHHLD--DSQQGKNFTFKCHREGNE----IYSVNSLNFH 250
           C+  +P+  G+ + S+EGRV +   D  ++ Q K + FKCHR+       +Y VN++ FH
Sbjct: 662 CVRCYPNGTGYALSSVEGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVNAMAFH 841

Query: 251 PVHHTFATAGSDGAFNFWDKDSKQRLKAMLRCSQPIPCSAFNNDGSIFAYSVCYDWSKGA 310
           P++ TFAT G DG  N WD ++K+RL    +    +   +F+ DG + A +  Y + +G 
Sbjct: 842 PIYGTFATGGCDGFVNVWDGNNKKRLYQYSKYPSSVAALSFSRDGRLLAVASSYTFEEGP 1021

Query: 311 ENHNPTTAKTNIYLHLPQESEVKGKPR 337
           + H+    +  IY+    E EVK KP+
Sbjct: 1022KPHD----QDAIYVRSVNEIEVKPKPK 1090



 Score = 52.4 bits (124), Expect = 3e-07
 Identities = 33/110 (30%), Positives = 56/110 (50%)
 Frame = +1

Query: 17  EVNQPPSDSVSSLCFSPKANLLVATSWDNQVRCWEVARNVATAPKASISHDQPVLCSAWK 76
           E+  PPSD +S++ FS  ++ L+ +SWD  VR ++     A   +    H  PVL   + 
Sbjct: 121 ELTNPPSDGISNIRFSNHSDHLLVSSWDKTVRLYDA---TADFLRGEFLHGGPVLDCCFH 291

Query: 77  DDGTTVFSGGCDKQVKMWPLLSGGQPMTVAMHDAPVKDIAWIPEMSLLVT 126
           DD ++ FS   D  V+   + + G+   +  HDAPV+ + +      L+T
Sbjct: 292 DD-SSGFSASADNTVRRL-IFATGKEDILGKHDAPVRCVEYSYAAGQLIT 435


>TC85659 SP|O24076|GBLP_MEDSA Guanine nucleotide-binding protein beta
           subunit-like protein. [Alfalfa] {Medicago sativa},
           complete
          Length = 1261

 Score = 62.8 bits (151), Expect = 2e-10
 Identities = 67/286 (23%), Positives = 116/286 (40%), Gaps = 13/286 (4%)
 Frame = +2

Query: 35  ANLLVATSWDNQVRCWEVARNVAT--APKASIS-HDQPVLCSAWKDDGTTVFSGGCDKQV 91
           ++++V  S D  +  W + +   T   P+  ++ H   V       DG    SG  D ++
Sbjct: 143 SDMIVTASRDKSIILWHLTKEDKTYGVPRRRLTGHSHFVQDVVLSSDGQFALSGSWDGEL 322

Query: 92  KMWPLLSGGQPMTVAMHDAPVKDIAWIPEMSLLVTGSWDRTIKYWDTR-------QPNPV 144
           ++W L +G        H   V  +A+  +   +V+ S DRTIK W+T        Q    
Sbjct: 323 RLWDLNAGTSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQDGDA 502

Query: 145 HTQQLPERCYAMSVKHPLMVVGTADRNILVYNLQNPQVEFKRIISPLKYQTRCLAAFPDQ 204
           H+  +    ++ S   P +V  + DR + V+NL N   + +  ++        +A  PD 
Sbjct: 503 HSDWVSCVRFSPSTLQPTIVSASWDRTVKVWNLTN--CKLRNTLAGHSGYVNTVAVSPD- 673

Query: 205 QGFLVGSIEGRVGVHHLDDSQQGKNFTFKCHREGNEIYSVNSLNFHPVHHTFATAGSDGA 264
            G L  S  G+ GV  L D  +GK        +   I  +++L F P +  +  A ++ +
Sbjct: 674 -GSLCAS-GGKDGVILLWDLAEGKRL---YSLDAGSI--IHALCFSP-NRYWLCAATESS 829

Query: 265 FNFWDKDSK---QRLKAMLRCSQPIPCSAFNNDGSIFAYSVCYDWS 307
              WD +SK   + LK  L+                  Y    +WS
Sbjct: 830 IKIWDLESKSIVEDLKVDLKTEADAAIGGDTTTKKKVIYCTSLNWS 967



 Score = 55.8 bits (133), Expect = 2e-08
 Identities = 59/265 (22%), Positives = 103/265 (38%), Gaps = 19/265 (7%)
 Frame = +2

Query: 23  SDSVSSLCFSPKANLLVATSWDNQVRCWEVARNVATAPKASISHDQPVLCSAWKDDGTTV 82
           S  V  +  S      ++ SWD ++R W++  N  T+ +  + H + VL  A+  D   +
Sbjct: 248 SHFVQDVVLSSDGQFALSGSWDGELRLWDL--NAGTSARRFVGHTKDVLSVAFSIDNRQI 421

Query: 83  FSGGCDKQVKMWPLLSGGQPMTVAMHDAP---VKDIAWIPE--MSLLVTGSWDRTIKYW- 136
            S   D+ +K+W  L G    T+   DA    V  + + P      +V+ SWDRT+K W 
Sbjct: 422 VSASRDRTIKLWNTL-GECKYTIQDGDAHSDWVSCVRFSPSTLQPTIVSASWDRTVKVWN 598

Query: 137 --DTRQPNPVHTQQLPERCYAMSVKHPLMVVGTADRNILVYNLQNPQVEFKRIISPLKYQ 194
             + +  N +          A+S    L   G  D  IL+++L     E KR+ S     
Sbjct: 599 LTNCKLRNTLAGHSGYVNTVAVSPDGSLCASGGKDGVILLWDL----AEGKRLYSLDAGS 766

Query: 195 TRCLAAFPDQQGFLVGSIEGRVGVHHLDDSQQGKNFTFKCHREGN-----------EIYS 243
                 F   + +L  + E  + +  L+     ++       E +           ++  
Sbjct: 767 IIHALCFSPNRYWLCAATESSIKIWDLESKSIVEDLKVDLKTEADAAIGGDTTTKKKVIY 946

Query: 244 VNSLNFHPVHHTFATAGSDGAFNFW 268
             SLN+     T  +  +DG    W
Sbjct: 947 CTSLNWSADGSTLFSGYTDGVVRVW 1021


>BG647724 similar to GP|11141605|gb LEUNIG {Arabidopsis thaliana}, partial
           (25%)
          Length = 757

 Score = 57.8 bits (138), Expect = 6e-09
 Identities = 27/72 (37%), Positives = 40/72 (55%)
 Frame = +2

Query: 70  VLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQPMTVAMHDAPVKDIAWIPEMSLLVTGSW 129
           V+CS +  DG  + SGG DK+V +W   S  Q  T+  H   + D+ + P M  L T S+
Sbjct: 440 VVCSHFSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVRFSPSMPRLATSSY 619

Query: 130 DRTIKYWDTRQP 141
           D+T++ WD   P
Sbjct: 620 DKTVRVWDVDNP 655


>TC90611 similar to GP|10177223|dbj|BAB10298. contains similarity to
           GTP-binding regulatory protein and WD-repeat
           protein~gene_id:MPF21.14, partial (40%)
          Length = 855

 Score = 56.2 bits (134), Expect = 2e-08
 Identities = 33/124 (26%), Positives = 57/124 (45%), Gaps = 10/124 (8%)
 Frame = +1

Query: 24  DSVSSLCFSPKANLLVATSWDNQVRCWEVARNVATAPKASISHDQPVLCSAWKDDGTTVF 83
           D+VSSL  S     L + SWD  ++ W   ++       + +HD  +       DG T +
Sbjct: 484 DTVSSLALSKDGKFLYSVSWDRTIKIWR-TKDFTCLESITNAHDDAINAVVVSYDG-TFY 657

Query: 84  SGGCDKQVKMWPLLSGGQPM----------TVAMHDAPVKDIAWIPEMSLLVTGSWDRTI 133
           SG  DK++K+W  L G              T+  H++ +  +    + S+L +G+ DR+I
Sbjct: 658 SGSADKRIKVWKNLQGDDHNKKKHKHSLVDTLEKHNSGINALVLSSDESILYSGACDRSI 837

Query: 134 KYWD 137
             W+
Sbjct: 838 LVWE 849



 Score = 30.4 bits (67), Expect = 1.0
 Identities = 39/164 (23%), Positives = 62/164 (37%), Gaps = 10/164 (6%)
 Frame = +1

Query: 25  SVSSLCFSPKANLLVATSWDNQVRCWEVARN------VATAPKASISHDQPVLCSAWKDD 78
           +V SL      N L +   D ++R W++  +      VAT P                D 
Sbjct: 268 AVKSLVIQSNKNTLFSAHQDRKIRVWKLTNDQTKYTHVATLPTLG-------------DR 408

Query: 79  GTTVFSGGCDKQVKMWPLLSGGQPMTVAMHDAPVKDIAWIPEMSLLVTGSWDRTIKYWDT 138
            + +       Q++        +  T   H   V  +A   +   L + SWDRTIK W T
Sbjct: 409 ASKILIPKNHVQIRRH------KKCTWVHHVDTVSSLALSKDGKFLYSVSWDRTIKIWRT 570

Query: 139 RQPNPVH--TQQLPERCYAMSVKHP-LMVVGTADRNILVY-NLQ 178
           +    +   T    +   A+ V +      G+AD+ I V+ NLQ
Sbjct: 571 KDFTCLESITNAHDDAINAVVVSYDGTFYSGSADKRIKVWKNLQ 702


>TC89149 similar to GP|20466231|gb|AAM20433.1 cell cycle switch protein
           {Arabidopsis thaliana}, partial (71%)
          Length = 1283

 Score = 54.7 bits (130), Expect = 5e-08
 Identities = 43/155 (27%), Positives = 69/155 (43%), Gaps = 7/155 (4%)
 Frame = +2

Query: 64  ISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQPMTVAMHDAPVKDIAWIPEMSL 123
           + H   V    W  D   + SGG D Q+ +W   S    + +  H A VK IAW P  S 
Sbjct: 536 VGHKSEVCGLKWSCDDRELASGGNDNQLLVWNQHSQQPTLRLTEHTAAVKAIAWSPHQSN 715

Query: 124 LVT---GSWDRTIKYWDT---RQPNPVHT-QQLPERCYAMSVKHPLMVVGTADRNILVYN 176
           L+    G+ DR I++W+T    Q N V T  Q+    ++ +V   +   G +   I+V+ 
Sbjct: 716 LLVSGGGTADRCIRFWNTTNGHQLNSVDTGSQVCNLAWSKNVNELVSTHGYSQNQIMVW- 892

Query: 177 LQNPQVEFKRIISPLKYQTRCLAAFPDQQGFLVGS 211
            + P +     ++    +   LA  PD Q  + G+
Sbjct: 893 -KYPSLAKVATLTGHSMRVLYLAMSPDGQTIVTGA 994



 Score = 39.7 bits (91), Expect = 0.002
 Identities = 29/126 (23%), Positives = 52/126 (41%), Gaps = 6/126 (4%)
 Frame = +2

Query: 25  SVSSLCFSPKANLLVATSWDNQVRCWEVARNVATAPKASISHDQPVLCSAWKDDGTTVFS 84
           +V ++ +SP  + L+ +      RC             S+     V   AW  +   + S
Sbjct: 677 AVKAIAWSPHQSNLLVSGGGTADRCIRFWNTTNGHQLNSVDTGSQVCNLAWSKNVNELVS 856

Query: 85  --GGCDKQVKMWPLLSGGQPMTVAMHDAPVKDIAWIPEMSLLVTGSWDRTIKYWDT---- 138
             G    Q+ +W   S  +  T+  H   V  +A  P+   +VTG+ D T+++W+     
Sbjct: 857 THGYSQNQIMVWKYPSLAKVATLTGHSMRVLYLAMSPDGQTIVTGAGDETLRFWNVFPSM 1036

Query: 139 RQPNPV 144
           + P PV
Sbjct: 1037KTPAPV 1054



 Score = 34.7 bits (78), Expect = 0.055
 Identities = 33/144 (22%), Positives = 58/144 (39%), Gaps = 5/144 (3%)
 Frame = +2

Query: 71  LCSA-WKDDGTTVFSGGCDKQVKMWPLLSGGQPMTVAMHDAPVKDIAWIPEMSLLVTGSW 129
           +CS  W  +G+ +  G    QV++W      +  T+  H      +AW     +L +GS 
Sbjct: 305 VCSVQWTKEGSFISIGTNGGQVQIWDGTKCKKVRTMGGHQTRTGVLAW--NSRILASGSR 478

Query: 130 DRTIKYWDTRQPNPVHTQQLPERCYAMSVKHPL----MVVGTADRNILVYNLQNPQVEFK 185
           DR I   D R P+    + +  +     +K       +  G  D  +LV+N  + Q   +
Sbjct: 479 DRNILQHDMRVPSDFIGKLVGHKSEVCGLKWSCDDRELASGGNDNQLLVWNQHSQQPTLR 658

Query: 186 RIISPLKYQTRCLAAFPDQQGFLV 209
             ++      + +A  P Q   LV
Sbjct: 659 --LTEHTAAVKAIAWSPHQSNLLV 724


>BG648991 similar to PIR|C86239|C86 protein T10O24.21 [imported] -
           Arabidopsis thaliana, partial (35%)
          Length = 702

 Score = 53.9 bits (128), Expect = 9e-08
 Identities = 28/112 (25%), Positives = 57/112 (50%), Gaps = 6/112 (5%)
 Frame = +3

Query: 77  DDGTTVFSGGCDKQVKMWPLLSGGQPMTVAM-HDAPVKDIAWIPEMSLLVTGSWDRTIKY 135
           + G  + S G D +VK+W + + G+ M   M H   V+DI +  + +  ++  +D+ IKY
Sbjct: 360 NSGHLILSAGMDTKVKIWDVFNTGKCMRTYMGHSKAVRDICFTNDGTKFLSAGYDKNIKY 539

Query: 136 WDTRQPNPVHTQQLPERCYAMSV-----KHPLMVVGTADRNILVYNLQNPQV 182
           WDT     + T    +  Y + +     K  +++ G +D+ I+ +++   Q+
Sbjct: 540 WDTETGQVISTFSTGKIPYVVKLNPDEDKQNVLLAGMSDKKIVQWDMNTGQI 695



 Score = 46.6 bits (109), Expect = 1e-05
 Identities = 32/115 (27%), Positives = 55/115 (47%), Gaps = 3/115 (2%)
 Frame = +3

Query: 26  VSSLCFSPKA-NLLVATSWDNQVRCWEVARNVATAPKASISHDQPVLCSAWKDDGTTVFS 84
           VS++ F P + +L+++   D +V+ W+V  N     +  + H + V    + +DGT   S
Sbjct: 336 VSAIRFFPNSGHLILSAGMDTKVKIWDVF-NTGKCMRTYMGHSKAVRDICFTNDGTKFLS 512

Query: 85  GGCDKQVKMWPLLSGGQPMTVAMHDAP--VKDIAWIPEMSLLVTGSWDRTIKYWD 137
            G DK +K W   +G    T +    P  VK      + ++L+ G  D+ I  WD
Sbjct: 513 AGYDKNIKYWDTETGQVISTFSTGKIPYVVKLNPDEDKQNVLLAGMSDKKIVQWD 677



 Score = 30.0 bits (66), Expect = 1.4
 Identities = 15/89 (16%), Positives = 35/89 (38%)
 Frame = +3

Query: 11  NPNKSFEVNQPPSDSVSSLCFSPKANLLVATSWDNQVRCWEVARNVATAPKASISHDQPV 70
           N  K        S +V  +CF+      ++  +D  ++ W+       +  ++      V
Sbjct: 423 NTGKCMRTYMGHSKAVRDICFTNDGTKFLSAGYDKNIKYWDTETGQVISTFSTGKIPYVV 602

Query: 71  LCSAWKDDGTTVFSGGCDKQVKMWPLLSG 99
             +  +D    + +G  DK++  W + +G
Sbjct: 603 KLNPDEDKQNVLLAGMSDKKIVQWDMNTG 689


>TC78188 similar to PIR|C84870|C84870 probable splicing factor [imported] -
           Arabidopsis thaliana, partial (95%)
          Length = 1436

 Score = 53.5 bits (127), Expect = 1e-07
 Identities = 40/163 (24%), Positives = 72/163 (43%), Gaps = 5/163 (3%)
 Frame = +1

Query: 25  SVSSLCFSPKANLLVATSWDNQVRCWEVARNVATAPKASISHDQPVLCSAWKDDGTTVFS 84
           +V ++ F+P  +++ + S D ++  W V  +          H   VL   W  DGT + S
Sbjct: 319 AVYTMKFNPTGSVVASGSHDKEIFLWNVHGDCKNFMVLK-GHKNAVLDLHWTSDGTQIIS 495

Query: 85  GGCDKQVKMWPLLSGGQPMTVAMHDAPVKDIAWIPE-MSLLVTGSWDRTIKYWDTRQPNP 143
              DK +++W   +G Q   +  H + V           L+V+GS D T K WD RQ   
Sbjct: 496 ASPDKTLRLWDTETGKQIKKMVEHLSYVNSCCPTRRGPPLVVSGSDDGTAKLWDMRQRGS 675

Query: 144 VHTQQLPER----CYAMSVKHPLMVVGTADRNILVYNLQNPQV 182
           + T   P++      + S     +  G  D ++ +++L+  +V
Sbjct: 676 IQT--FPDKYQITAVSFSDASDKIYTGGIDNDVKIWDLRKGEV 798



 Score = 46.2 bits (108), Expect = 2e-05
 Identities = 28/109 (25%), Positives = 49/109 (44%), Gaps = 2/109 (1%)
 Frame = +1

Query: 37  LLVATSWDNQVRCWEVAR--NVATAPKASISHDQPVLCSAWKDDGTTVFSGGCDKQVKMW 94
           L+V+ S D   + W++ +  ++ T P         +   ++ D    +++GG D  VK+W
Sbjct: 613 LVVSGSDDGTAKLWDMRQRGSIQTFPDK-----YQITAVSFSDASDKIYTGGIDNDVKIW 777

Query: 95  PLLSGGQPMTVAMHDAPVKDIAWIPEMSLLVTGSWDRTIKYWDTRQPNP 143
            L  G   MT+  H   +  +   P+ S L+T   D  +  WD R   P
Sbjct: 778 DLRKGEVTMTLQGHQDMITSMQLSPDGSYLLTNGMDCKLCIWDMRPYAP 924



 Score = 38.1 bits (87), Expect = 0.005
 Identities = 27/130 (20%), Positives = 51/130 (38%), Gaps = 12/130 (9%)
 Frame = +1

Query: 21  PPSDSVSSLCFSPKANLLVATSWDNQVRCWEVARNVATAPKASISHDQPVLCSAWKDDGT 80
           P    ++++ FS  ++ +     DN V+ W++ +   T       H   +       DG+
Sbjct: 688 PDKYQITAVSFSDASDKIYTGGIDNDVKIWDLRKGEVTMTLQG--HQDMITSMQLSPDGS 861

Query: 81  TVFSGGCDKQVKMWPL------------LSGGQPMTVAMHDAPVKDIAWIPEMSLLVTGS 128
            + + G D ++ +W +            L G Q       +  +    W P+ S +  GS
Sbjct: 862 YLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHN----FEKNLLKCGWSPDGSKVTAGS 1029

Query: 129 WDRTIKYWDT 138
            DR +  WDT
Sbjct: 1030SDRMVYIWDT 1059


>TC89922 weakly similar to GP|15912305|gb|AAL08286.1 AT4g18900/F13C5_70
           {Arabidopsis thaliana}, partial (48%)
          Length = 864

 Score = 51.6 bits (122), Expect = 4e-07
 Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
 Frame = +1

Query: 65  SHDQPVLCSAW-KDDGTTVFSGGCDKQVKMWPLLSGGQPMTVAMHDAPVKDIAWIPE-MS 122
           SH   VL  AW K+   T+ S   DK+VK+W +++G   +T+  H   V+ +AW      
Sbjct: 85  SHTDSVLGLAWNKEYSNTLASASADKRVKIWDIVAGKCTITMDHHSDKVQAVAWNHRAQQ 264

Query: 123 LLVTGSWDRTIKYWDTRQPN 142
           +L++GS+D T+   D R P+
Sbjct: 265 ILLSGSFDHTVALKDVRTPS 324



 Score = 33.9 bits (76), Expect = 0.094
 Identities = 24/98 (24%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
 Frame = +1

Query: 3   TFLSNTNQNPNKSFEVNQPPSDSVSSLCFSPKA-NLLVATSWDNQVRCWEVARNVATAPK 61
           T +SN     N +F ++     SV+S+ ++  A NLL   S D  V+ W+++ N  ++  
Sbjct: 445 TAMSNATSVQNATFTLHAHDK-SVTSVSYNTAAPNLLATGSMDKTVKLWDLSNNQPSSVA 621

Query: 62  ASISHDQPVLCSAWKDDGTTVFS-GGCDKQVKMWPLLS 98
           +       V   ++ +D   + + GG   ++++W  LS
Sbjct: 622 SKEPKAGAVFSISFSEDNPFLLAIGGSKGKLQLWDTLS 735



 Score = 32.7 bits (73), Expect = 0.21
 Identities = 38/148 (25%), Positives = 63/148 (41%), Gaps = 22/148 (14%)
 Frame = +1

Query: 23  SDSVSSLCFSPKAN-LLVATSWDNQVRCWEVARNVATAPKASISHDQPVLCSAWK----- 76
           SD V ++ ++ +A  +L++ S+D+ V   +V     +    S+S D   L  AW      
Sbjct: 220 SDKVQAVAWNHRAQQILLSGSFDHTVALKDVRTPSHSGYTWSVSADVESL--AWDPHTEH 393

Query: 77  ------DDGT-------TVFSGGCDKQVKMWPLLSGGQPMTVAMHDAPVKDIAW-IPEMS 122
                 +DGT       T  S     Q             T+  HD  V  +++     +
Sbjct: 394 SFAVSLEDGTIQCFDVRTAMSNATSVQ---------NATFTLHAHDKSVTSVSYNTAAPN 546

Query: 123 LLVTGSWDRTIKYWD--TRQPNPVHTQQ 148
           LL TGS D+T+K WD    QP+ V +++
Sbjct: 547 LLATGSMDKTVKLWDLSNNQPSSVASKE 630


>TC88481 similar to PIR|T00806|T02445 probable U4/U6 small nuclear
            ribonucleoprotein [imported] - Arabidopsis thaliana,
            partial (60%)
          Length = 1836

 Score = 50.1 bits (118), Expect = 1e-06
 Identities = 30/123 (24%), Positives = 52/123 (41%)
 Frame = +1

Query: 24   DSVSSLCFSPKANLLVATSWDNQVRCWEVARNVATAPKASISHDQPVLCSAWKDDGTTVF 83
            + ++ + F P    L   S+D   R W+V        +    H + V    +  DG+   
Sbjct: 1204 ERLARIAFHPSGKYLGTASYDKTWRLWDVETEEELLLQEG--HSRSVYGLDFHHDGSLAA 1377

Query: 84   SGGCDKQVKMWPLLSGGQPMTVAMHDAPVKDIAWIPEMSLLVTGSWDRTIKYWDTRQPNP 143
            S G D   ++W L +G   + +  H   +  I++ P    L TG  D T + WD R+   
Sbjct: 1378 SCGLDALARVWDLRTGRSVLALEGHVKSILGISFSPNGYHLATGGEDNTCRIWDLRKKKS 1557

Query: 144  VHT 146
            ++T
Sbjct: 1558 LYT 1566



 Score = 47.8 bits (112), Expect = 6e-06
 Identities = 33/125 (26%), Positives = 54/125 (42%), Gaps = 1/125 (0%)
 Frame = +1

Query: 23   SDSVSSLCFSPKANLLVATSWDNQVRCWEVARNVATAPKASISHDQPVLCSAWKDDGTTV 82
            S SV  L F    +L  +   D   R W++      +  A   H + +L  ++  +G  +
Sbjct: 1327 SRSVYGLDFHHDGSLAASCGLDALARVWDL--RTGRSVLALEGHVKSILGISFSPNGYHL 1500

Query: 83   FSGGCDKQVKMWPLLSGGQPMTVAMHDAPVKDIAWIPEMS-LLVTGSWDRTIKYWDTRQP 141
             +GG D   ++W L       T+  H   +  + + P+    LVT S+D T K W +R  
Sbjct: 1501 ATGGEDNTCRIWDLRKKKSLYTIPAHSNLISQVKFEPQEGYFLVTASYDMTAKVWSSRDF 1680

Query: 142  NPVHT 146
             PV T
Sbjct: 1681 KPVKT 1695



 Score = 43.1 bits (100), Expect = 2e-04
 Identities = 53/249 (21%), Positives = 101/249 (40%), Gaps = 5/249 (2%)
 Frame = +1

Query: 62   ASISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQPMTVAMHDAPVKDIAWIP-E 120
            + I  D+P+   ++  DG  + +       K+W + +  +  T+  H     D+A+ P  
Sbjct: 934  SEIGDDRPLTGCSFSRDGKGLATCSFTGATKLWSMPNVKKVSTLKGHTQRATDVAYSPVH 1113

Query: 121  MSLLVTGSWDRTIKYWDTR----QPNPVHTQQLPERCYAMSVKHPLMVVGTADRNILVYN 176
             + L T S DRT KYW+ +         H ++L    +  S K+    +GTA  +   + 
Sbjct: 1114 KNHLATASADRTAKYWNDQGALLGTFKGHLERLARIAFHPSGKY----LGTASYD-KTWR 1278

Query: 177  LQNPQVEFKRIISPLKYQTRCLAAFPDQQGFLVGSIEGRVGVHHLDDSQQGKNFTFKCHR 236
            L + + E + ++   +  +R +          + +  G   +  + D + G++       
Sbjct: 1279 LWDVETEEELLLQ--EGHSRSVYGLDFHHDGSLAASCGLDALARVWDLRTGRSV---LAL 1443

Query: 237  EGNEIYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAMLRCSQPIPCSAFNNDGS 296
            EG+ + S+  ++F P  +  AT G D     WD   K+ L  +   S  I    F     
Sbjct: 1444 EGH-VKSILGISFSPNGYHLATGGEDNTCRIWDLRKKKSLYTIPAHSNLISQVKFEPQEG 1620

Query: 297  IFAYSVCYD 305
             F  +  YD
Sbjct: 1621 YFLVTASYD 1647



 Score = 39.7 bits (91), Expect = 0.002
 Identities = 30/114 (26%), Positives = 48/114 (41%), Gaps = 2/114 (1%)
 Frame = +1

Query: 25   SVSSLCFSPKANLLVATSWDNQVRCWEVAR--NVATAPKASISHDQPVLCSAWKDDGTTV 82
            S+  + FSP    L     DN  R W++ +  ++ T P  S    Q         +G  +
Sbjct: 1459 SILGISFSPNGYHLATGGEDNTCRIWDLRKKKSLYTIPAHSNLISQ---VKFEPQEGYFL 1629

Query: 83   FSGGCDKQVKMWPLLSGGQPMTVAMHDAPVKDIAWIPEMSLLVTGSWDRTIKYW 136
             +   D   K+W         T++ H+A V  +  + +   +VT S DRTIK W
Sbjct: 1630 VTASYDMTAKVWSSRDFKPVKTLSGHEAKVTSLDVLGDGGYIVTVSHDRTIKLW 1791


>BG586181 similar to GP|4689316|gb| peroxisomal targeting signal type 2
           receptor {Arabidopsis thaliana}, partial (56%)
          Length = 804

 Score = 48.9 bits (115), Expect = 3e-06
 Identities = 40/145 (27%), Positives = 72/145 (49%), Gaps = 4/145 (2%)
 Frame = +1

Query: 26  VSSLCFSPK-ANLLVATSWDNQVRCWEVARNVATAPKASISHDQPVLCSAW-KDDGTTVF 83
           V S  ++P+ A++  + S D  VR W+V    +T    +  H+  +L   W K D   + 
Sbjct: 46  VYSSVWNPRHADVFASASGDCTVRIWDVREPGSTMILPA--HEHEILSCDWNKYDECIIA 219

Query: 84  SGGCDKQVKMWPLLSGGQPMTVAM-HDAPVKDIAWIPEM-SLLVTGSWDRTIKYWDTRQP 141
           +G  DK VK+W + S   P+ V   H   V+ + + P + +LLV+ S+D T+  WD    
Sbjct: 220 TGSVDKSVKVWDVRSYRVPVAVLNGHGYAVRKVKFSPHVRNLLVSCSYDMTVCVWDFMVE 399

Query: 142 NPVHTQQLPERCYAMSVKHPLMVVG 166
           + + ++      +A+ V   ++V G
Sbjct: 400 DALVSRYDHHTEFAVGVDMSVLVEG 474



 Score = 39.3 bits (90), Expect = 0.002
 Identities = 23/84 (27%), Positives = 37/84 (43%), Gaps = 2/84 (2%)
 Frame = +1

Query: 58  TAPKASISHDQPVLCSAWKDDGTTVF-SGGCDKQVKMWPLLSGGQPMTVAMHDAPVKDIA 116
           T+ +    H   V  S W      VF S   D  V++W +   G  M +  H+  +    
Sbjct: 10  TSVRTFKEHAYCVYSSVWNPRHADVFASASGDCTVRIWDVREPGSTMILPAHEHEILSCD 189

Query: 117 WIP-EMSLLVTGSWDRTIKYWDTR 139
           W   +  ++ TGS D+++K WD R
Sbjct: 190 WNKYDECIIATGSVDKSVKVWDVR 261



 Score = 30.4 bits (67), Expect = 1.0
 Identities = 24/112 (21%), Positives = 49/112 (43%), Gaps = 6/112 (5%)
 Frame = +1

Query: 104 TVAMHDAPVKDIAWIPEMS-LLVTGSWDRTIKYWDTRQPN-----PVHTQQLPERCYAMS 157
           T   H   V    W P  + +  + S D T++ WD R+P      P H  ++   C    
Sbjct: 22  TFKEHAYCVYSSVWNPRHADVFASASGDCTVRIWDVREPGSTMILPAHEHEILS-CDWNK 198

Query: 158 VKHPLMVVGTADRNILVYNLQNPQVEFKRIISPLKYQTRCLAAFPDQQGFLV 209
               ++  G+ D+++ V+++++ +V    +++   Y  R +   P  +  LV
Sbjct: 199 YDECIIATGSVDKSVKVWDVRSYRVPV-AVLNGHGYAVRKVKFSPHVRNLLV 351


>TC88475 similar to GP|20260442|gb|AAM13119.1 unknown protein {Arabidopsis
           thaliana}, partial (96%)
          Length = 1315

 Score = 48.1 bits (113), Expect = 5e-06
 Identities = 61/245 (24%), Positives = 109/245 (43%), Gaps = 5/245 (2%)
 Frame = +3

Query: 23  SDSVSSLCFSPKANLLVAT-SWDNQVRCWEVARNVATAPKASISHDQPVLCSAWKDDGTT 81
           +DSV  LC+ PK   L+AT S D  VR W+ AR+   + +A +S +   +   +K DGT 
Sbjct: 339 TDSVDQLCWDPKHPDLIATASGDKTVRLWD-ARSGKCSQQAELSGEN--INITYKPDGTH 509

Query: 82  VFSGGCDKQVKMWPLLSGGQPMTVAMHDAPVKDIAW--IPEMSLLVTGSWD-RTIKYWDT 138
           V  G  D ++ +  +    +PM     +  V +IAW    EM  L TG+     + Y   
Sbjct: 510 VAVGNRDDELTILDVRK-FKPMHRRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLSYPSL 686

Query: 139 RQPNPVHTQQLPERCYAMSVKHPLMVVGTADRNILVYNLQNPQVEFKRIISPLKYQTRCL 198
           R  + +        C A+        VG+AD  + ++ +   ++   R  + L++  R +
Sbjct: 687 RPLDTLMAHTAGCYCIAIDPTGRHFAVGSADSLVSLWVIS--EMLCVRTFTKLEWPVRTI 860

Query: 199 AAFPDQQGFLVGSIEGRVGVHHLDDSQQGKN-FTFKCHREGNEIYSVNSLNFHPVHHTFA 257
           +   +  G L+ S    + +  + +   GK      C        ++NS+ ++P ++  A
Sbjct: 861 SF--NHTGDLIASASEDLFI-DISNVHTGKTVHHIPCRA------AMNSVEWNPKYNVLA 1013

Query: 258 TAGSD 262
            AG D
Sbjct: 1014YAGDD 1028



 Score = 45.4 bits (106), Expect = 3e-05
 Identities = 49/241 (20%), Positives = 93/241 (38%), Gaps = 7/241 (2%)
 Frame = +3

Query: 66  HDQPVLCSAWKDDGTTVFSGGCDKQVKMWPL--LSGGQPMTVAM--HDAPVKDIAWIPEM 121
           H + V   AW   GT + SG  D+  ++W +   + G+   + +  H   V  + W P+ 
Sbjct: 198 HKKKVHSVAWNCIGTKLASGSVDQTARIWHIDPHAHGKVKDIELKGHTDSVDQLCWDPKH 377

Query: 122 -SLLVTGSWDRTIKYWDTRQPNPVHTQQLPERCYAMSVK--HPLMVVGTADRNILVYNLQ 178
             L+ T S D+T++ WD R        +L      ++ K     + VG  D  + + +++
Sbjct: 378 PDLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHVAVGNRDDELTILDVR 557

Query: 179 NPQVEFKRIISPLKYQTRCLAAFPDQQGFLVGSIEGRVGVHHLDDSQQGKNFTFKCHREG 238
             +   +R      Y+   +A     + F + +  G V V  L         T   H  G
Sbjct: 558 KFKPMHRR---KFNYEVNEIAWNMTGEMFFLTTGNGTVEV--LSYPSLRPLDTLMAHTAG 722

Query: 239 NEIYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAMLRCSQPIPCSAFNNDGSIF 298
               +++     P    FA   +D   + W       ++   +   P+   +FN+ G + 
Sbjct: 723 CYCIAID-----PTGRHFAVGSADSLVSLWVISEMLCVRTFTKLEWPVRTISFNHTGDLI 887

Query: 299 A 299
           A
Sbjct: 888 A 890


>TC79362 WD-repeat cell cycle regulatory protein
          Length = 1800

 Score = 47.8 bits (112), Expect = 6e-06
 Identities = 38/153 (24%), Positives = 66/153 (42%), Gaps = 7/153 (4%)
 Frame = +3

Query: 66   HDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQPMTVAMHDAPVKDIAWIPEMSLLV 125
            H   V    W  D   + SGG D ++ +W   S    +    H A VK IAW P +  L+
Sbjct: 1035 HKSEVCGLKWSYDNRELASGGNDNKLFVWNQHSTQPVLKYCEHTAAVKAIAWSPHLHGLL 1214

Query: 126  T---GSWDRTIKYWDTRQPNPVHT----QQLPERCYAMSVKHPLMVVGTADRNILVYNLQ 178
                G+ DR I++W+T   + +       Q+    ++ +V   +   G +   I+V+  +
Sbjct: 1215 ASGGGTADRCIRFWNTTTNSHLSCMDTGSQVCNLVWSKNVNELVSTHGYSQNQIIVW--R 1388

Query: 179  NPQVEFKRIISPLKYQTRCLAAFPDQQGFLVGS 211
             P +     ++   Y+   LA  PD Q  + G+
Sbjct: 1389 YPTMSKLATLTGHTYRVLYLAISPDGQTIVTGA 1487



 Score = 35.8 bits (81), Expect = 0.025
 Identities = 31/139 (22%), Positives = 53/139 (37%), Gaps = 12/139 (8%)
 Frame = +3

Query: 11   NPNKSFEVNQPPSDSVSSLC----------FSPKANLLVATSWDNQVRCWEVARNVATAP 60
            N NK F  NQ  +  V   C          +SP  + L+A+      RC         + 
Sbjct: 1098 NDNKLFVWNQHSTQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNSH 1277

Query: 61   KASISHDQPVLCSAWKDDGTTVFS--GGCDKQVKMWPLLSGGQPMTVAMHDAPVKDIAWI 118
             + +     V    W  +   + S  G    Q+ +W   +  +  T+  H   V  +A  
Sbjct: 1278 LSCMDTGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPTMSKLATLTGHTYRVLYLAIS 1457

Query: 119  PEMSLLVTGSWDRTIKYWD 137
            P+   +VTG+ D T+ +W+
Sbjct: 1458 PDGQTIVTGAGDETLTFWN 1514



 Score = 28.5 bits (62), Expect = 3.9
 Identities = 25/102 (24%), Positives = 40/102 (38%)
 Frame = +3

Query: 38  LVATSWDNQVRCWEVARNVATAPKASISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLL 97
           ++A    N V  W    +  T     +  D  V    W   GT +  G  + +V++W   
Sbjct: 705 VLAVGLGNCVYLWNACSSKVTK-LCDLGVDDCVCSVGWAQRGTHLAVGTNNGKVQIWDAA 881

Query: 98  SGGQPMTVAMHDAPVKDIAWIPEMSLLVTGSWDRTIKYWDTR 139
              +  ++  H   V  +AW    SLL +G  D+ I   D R
Sbjct: 882 RCKKIRSMEGHRLRVGALAW--SSSLLSSGGRDKNIYQRDIR 1001


>TC79342 similar to GP|10177096|dbj|BAB10430. Notchless protein homolog
           {Arabidopsis thaliana}, partial (47%)
          Length = 873

 Score = 47.4 bits (111), Expect = 8e-06
 Identities = 34/120 (28%), Positives = 49/120 (40%), Gaps = 6/120 (5%)
 Frame = +3

Query: 24  DSVSSLCFSPKANLLVATSWDNQVRCWEVARNVATAPKASISHDQPVLCSAWKDDGTTVF 83
           ++V S+ FSP    L + S D  VR W++     T       H   VLC AW  DG  + 
Sbjct: 498 EAVLSVAFSPDGRQLASGSGDTTVRFWDLGTQ--TPMYTCTGHKNWVLCIAWSPDGKYLV 671

Query: 84  SGGCDKQVKMWPLLSGGQ-PMTVAMHDAPVKDIAWIP-----EMSLLVTGSWDRTIKYWD 137
           SG    ++  W   +G Q    +  H   +  I+W P          V+ S D   + WD
Sbjct: 672 SGSMSGELICWDPQTGKQLGNALTGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWD 851



 Score = 42.7 bits (99), Expect = 2e-04
 Identities = 28/77 (36%), Positives = 37/77 (47%), Gaps = 1/77 (1%)
 Frame = +3

Query: 62  ASIS-HDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQPMTVAMHDAPVKDIAWIPE 120
           A+IS H + VL  A+  DG  + SG  D  V+ W L +     T   H   V  IAW P+
Sbjct: 477 ATISGHGEAVLSVAFSPDGRQLASGSGDTTVRFWDLGTQTPMYTCTGHKNWVLCIAWSPD 656

Query: 121 MSLLVTGSWDRTIKYWD 137
              LV+GS    +  WD
Sbjct: 657 GKYLVSGSMSGELICWD 707


>TC79118 similar to GP|16323188|gb|AAL15328.1 AT5g67320/K8K14_4 {Arabidopsis
           thaliana}, partial (44%)
          Length = 1098

 Score = 46.6 bits (109), Expect = 1e-05
 Identities = 35/155 (22%), Positives = 62/155 (39%), Gaps = 12/155 (7%)
 Frame = +2

Query: 40  ATSWDNQVRCWEVARNVATAPKASISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSG 99
           ++S DN +   ++  N  T   A   H   V C  W   GT + S   D   K+W +   
Sbjct: 242 SSSTDNMIYVCKIGENHPTQTFAG--HQGEVNCVKWDPTGTLLASCSDDITAKIWSVKQD 415

Query: 100 GQPMTVAMHDAPVKDIAWIP---------EMSLLVTGSWDRTIKYWDTRQPNPVHT---Q 147
                   H   +  I W P         +  LL + S+D T+K WD      +H+    
Sbjct: 416 KYLHDFREHSKEIYTIRWSPTGPGTNNPNKKLLLASASFDSTVKLWDIELGKLIHSLNGH 595

Query: 148 QLPERCYAMSVKHPLMVVGTADRNILVYNLQNPQV 182
           + P    A S     +  G+ D+++ +++L+  ++
Sbjct: 596 RHPVYSVAFSPNGEYIASGSLDKSLHIWSLKEGKI 700



 Score = 36.6 bits (83), Expect = 0.015
 Identities = 22/80 (27%), Positives = 33/80 (40%)
 Frame = +2

Query: 66  HDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQPMTVAMHDAPVKDIAWIPEMSLLV 125
           H  P L   W+ + T+  S   D  + +  +       T A H   V  + W P  +LL 
Sbjct: 191 HSGPTLDVDWRTN-TSFASSSTDNMIYVCKIGENHPTQTFAGHQGEVNCVKWDPTGTLLA 367

Query: 126 TGSWDRTIKYWDTRQPNPVH 145
           + S D T K W  +Q   +H
Sbjct: 368 SCSDDITAKIWSVKQDKYLH 427


>TC78679 similar to GP|20466538|gb|AAM20586.1 putative WD-repeat protein
           {Arabidopsis thaliana}, partial (55%)
          Length = 1198

 Score = 46.2 bits (108), Expect = 2e-05
 Identities = 20/71 (28%), Positives = 39/71 (54%)
 Frame = +2

Query: 82  VFSGGCDKQVKMWPLLSGGQPMTVAMHDAPVKDIAWIPEMSLLVTGSWDRTIKYWDTRQP 141
           +++G  +  V ++ L+SG Q  T+  H +PV+D +W P   +LV+ SWD  +  W +   
Sbjct: 752 IYTGSHNACVYVYDLVSGAQVATLKHHKSPVRDCSWHPFHPMLVSSSWDGDVVKWQSAGS 931

Query: 142 NPVHTQQLPER 152
           + +    + +R
Sbjct: 932 SDMAASSVKKR 964



 Score = 33.1 bits (74), Expect = 0.16
 Identities = 31/122 (25%), Positives = 54/122 (43%), Gaps = 4/122 (3%)
 Frame = +1

Query: 23  SDSVSSLCFSPKANLLVATSWDNQVRCWEVARNVATAPKASISHDQPVLCSAWKDDGTTV 82
           S  + SL FS     LVA +  + +  +++  N  +    + + D   +C A  + G  +
Sbjct: 184 SFGIFSLKFSTDGKELVAGTSGDSIYVYDLETNKVSLRILAHTADVNTVCFA-DETGHLI 360

Query: 83  FSGGCDKQVKMWP---LLSGGQPMTVAM-HDAPVKDIAWIPEMSLLVTGSWDRTIKYWDT 138
           +SG  D   K+W    L +  +P  V M H   +  I    +    ++   D+TIK WD 
Sbjct: 361 YSGSDDSFCKVWDRRCLNAKDKPAGVLMVHLEGITFIDSRGDGRYFISNGKDQTIKLWDI 540

Query: 139 RQ 140
           R+
Sbjct: 541 RK 546


>TC84162 similar to GP|15810485|gb|AAL07130.1 putative WD40-repeat protein
           {Arabidopsis thaliana}, partial (29%)
          Length = 628

 Score = 45.1 bits (105), Expect = 4e-05
 Identities = 31/109 (28%), Positives = 46/109 (41%)
 Frame = +1

Query: 28  SLCFSPKANLLVATSWDNQVRCWEVARNVATAPKASISHDQPVLCSAWKDDGTTVFSGGC 87
           S+ FSP    +V  S D  +R W ++    +  K    H   VL + +   GT + S G 
Sbjct: 127 SVEFSPVDQCVVTASGDKTIRIWAISD--GSCLKTFEGHTSSVLRALFVTRGTQIVSCGA 300

Query: 88  DKQVKMWPLLSGGQPMTVAMHDAPVKDIAWIPEMSLLVTGSWDRTIKYW 136
           D  VK+W + S     T   H+  V  +A   +   L TG  D  +  W
Sbjct: 301 DGLVKLWTVKSNECVATYDNHEDKVWALAVGRKTETLATGGSDAVVNLW 447


>CB893690 weakly similar to GP|9759025|dbj gene_id:K6A12.9~similar to unknown
           protein~sp|O15736 {Arabidopsis thaliana}, partial (59%)
          Length = 916

 Score = 43.9 bits (102), Expect = 9e-05
 Identities = 26/105 (24%), Positives = 49/105 (45%), Gaps = 2/105 (1%)
 Frame = +3

Query: 35  ANLLVATSWDNQVRCWEVARNVATAPKASISHDQPVLCSA--WKDDGTTVFSGGCDKQVK 92
           + L+V+ ++D  ++ W++ +   T          P +C+A  +  DG T+FSG  D  ++
Sbjct: 531 SRLVVSAAYDGTIKVWDLMKGYCTNTIMF-----PSICNALCFSTDGQTIFSGHVDGNLR 695

Query: 93  MWPLLSGGQPMTVAMHDAPVKDIAWIPEMSLLVTGSWDRTIKYWD 137
           +W + SG     VA H   V  I+     ++ +T   D     +D
Sbjct: 696 LWDIQSGRLLSEVATHSHAVTSISLSRNGNIALTSGGDNLHNLFD 830



 Score = 32.3 bits (72), Expect = 0.27
 Identities = 23/103 (22%), Positives = 47/103 (45%), Gaps = 2/103 (1%)
 Frame = +3

Query: 123 LLVTGSWDRTIKYWDTRQPNPVHTQQLPERCYAM--SVKHPLMVVGTADRNILVYNLQNP 180
           L+V+ ++D TIK WD  +    +T   P  C A+  S     +  G  D N+ ++++Q+ 
Sbjct: 537 LVVSAAYDGTIKVWDLMKGYCTNTIMFPSICNALCFSTDGQTIFSGHVDGNLRLWDIQS- 713

Query: 181 QVEFKRIISPLKYQTRCLAAFPDQQGFLVGSIEGRVGVHHLDD 223
                R++S +   +  + +    +   +    G   +H+L D
Sbjct: 714 ----GRLLSEVATHSHAVTSISLSRNGNIALTSGGDNLHNLFD 830


>TC82717 weakly similar to GP|21539583|gb|AAM53344.1 putative coatomer
           complex subunit {Arabidopsis thaliana}, partial (29%)
          Length = 1118

 Score = 43.1 bits (100), Expect = 2e-04
 Identities = 35/129 (27%), Positives = 60/129 (46%), Gaps = 4/129 (3%)
 Frame = +1

Query: 13  NKSFEVNQPPSDSVSSLCFSPK-ANLLVATSWDNQVRCWEVARNVATAPKASIS-HDQPV 70
           +++FE N   S  V  + F+PK  +   + S D  ++ W +    ++AP  +   H + +
Sbjct: 493 DETFEGN---SHYVMQVAFNPKDPSTFASASLDGTLKIWTID---SSAPNFTFEGHLKGM 654

Query: 71  LCSAW--KDDGTTVFSGGCDKQVKMWPLLSGGQPMTVAMHDAPVKDIAWIPEMSLLVTGS 128
            C  +   +D   + SG  D   K+W   S     T+  H   V  I   PE+ +++T S
Sbjct: 655 NCVDYFESNDKQYLLSGSDDYTAKVWDYDSKNCVQTLEGHKNNVTAICAHPEIPIIITAS 834

Query: 129 WDRTIKYWD 137
            D T+K WD
Sbjct: 835 EDSTVKIWD 861



 Score = 33.1 bits (74), Expect = 0.16
 Identities = 33/146 (22%), Positives = 59/146 (39%), Gaps = 11/146 (7%)
 Frame = +1

Query: 78  DGTTVFSGGCDKQVKMWPLLSGGQPMTVAMHDAPVKDIAWIP--EMSLLVTGSWDRTIKY 135
           D +T  S   D  +K+W + S     T   H   +  + +    +   L++GS D T K 
Sbjct: 550 DPSTFASASLDGTLKIWTIDSSAPNFTFEGHLKGMNCVDYFESNDKQYLLSGSDDYTAKV 729

Query: 136 WDTRQPNPVHTQQLPERCYAMSVKH---PLMVVGTADRNI-----LVYNLQNP-QVEFKR 186
           WD    N V T +  +        H   P+++  + D  +     + Y LQN      +R
Sbjct: 730 WDYDSKNCVQTLEGHKNNVTAICAHPEIPIIITASEDSTVKIWDAVTYRLQNTLDFGLER 909

Query: 187 IISPLKYQTRCLAAFPDQQGFLVGSI 212
           + S    +     AF   +GF++ ++
Sbjct: 910 VWSIGYKKGSSQLAFGCDKGFIIVTV 987


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.318    0.132    0.422 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,181,976
Number of Sequences: 36976
Number of extensions: 208360
Number of successful extensions: 1190
Number of sequences better than 10.0: 117
Number of HSP's better than 10.0 without gapping: 1049
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1147
length of query: 344
length of database: 9,014,727
effective HSP length: 97
effective length of query: 247
effective length of database: 5,428,055
effective search space: 1340729585
effective search space used: 1340729585
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)


Lotus: description of TM0314.9