TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0284.4
         (247 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC86878 similar to SP|O80840|PMM_ARATH Probable phosphomannomuta...   461  e-131
TC86879 similar to SP|O80840|PMM_ARATH Probable phosphomannomuta...   413  e-116
AW574030 similar to GP|3851530|gb| nodulin {Glycine max}, partia...    33  0.10
TC93852                                                                31  0.39
TC84479 ENBP1                                                          31  0.39
TC92300 similar to GP|22136838|gb|AAM91763.1 unknown protein {Ar...    28  2.5
BF648394                                                               28  3.3
TC90853 similar to GP|2342427|dbj|BAA21857.1 NPK1-related protei...    28  4.3
AJ499680                                                               27  7.3
TC77894 similar to GP|12583793|gb|AAG59645.1 hypothetical protei...    27  7.3
BQ751247 similar to GP|21110151|gb| conserved hypothetical prote...    27  9.5
TC82470 homologue to GP|23497460|gb|AAN37003.1 hypothetical prot...    27  9.5

>TC86878 similar to SP|O80840|PMM_ARATH Probable phosphomannomutase (EC
           5.4.2.8) (PMM). [Mouse-ear cress] {Arabidopsis
           thaliana}, complete
          Length = 1188

 Score =  461 bits (1187), Expect = e-131
 Identities = 226/245 (92%), Positives = 232/245 (94%)
 Frame = +2

Query: 1   MAVAKPGVIALFDVDGTLTAPRKVANSEMLGFMQELRKVVTVGVVGGSDLIKISEQLGST 60
           MA   PGV+ALFDVDGTLTAPRK    EML FMQ+LRK VTVGVVGGSDL+KISEQLG T
Sbjct: 284 MASLNPGVLALFDVDGTLTAPRKGVTPEMLKFMQDLRKFVTVGVVGGSDLVKISEQLGQT 463

Query: 61  VTHDYDYVFSENGLVAHKQGKLIGTESLKTFLGDEKLKEFINFTLHYIADLDIPIKRGTF 120
           VT DYDYVFSENGLVAHKQGKLIGT+SLKTF+GDEKLKEFINFTLHYIADLDIPIKRGTF
Sbjct: 464 VTTDYDYVFSENGLVAHKQGKLIGTQSLKTFVGDEKLKEFINFTLHYIADLDIPIKRGTF 643

Query: 121 IEFRSGMLNVSPIGRNCSQEERDEFEKYDKVQNIRPKMVSVLREKFAHLNLTFSIGGQIS 180
           IEFRSGMLNVSPIGRNCSQEERDEFEKYDKVQNIR KMVS+LREKFAHLNLTFSIGGQIS
Sbjct: 644 IEFRSGMLNVSPIGRNCSQEERDEFEKYDKVQNIRSKMVSILREKFAHLNLTFSIGGQIS 823

Query: 181 FDVFPQGWDKTYCLRYLDGFNEIHFFGDKTYKGGNDHEIYESERTIGHTVTSPEDTIKQC 240
           FDVFPQGWDKTYCLRYLDGFNEIHFFGDKTYKGGNDHEIYESERTIGHTVTSPEDTIKQC
Sbjct: 824 FDVFPQGWDKTYCLRYLDGFNEIHFFGDKTYKGGNDHEIYESERTIGHTVTSPEDTIKQC 1003

Query: 241 KSLFL 245
            SLFL
Sbjct: 1004TSLFL 1018


>TC86879 similar to SP|O80840|PMM_ARATH Probable phosphomannomutase (EC
           5.4.2.8) (PMM). [Mouse-ear cress] {Arabidopsis
           thaliana}, partial (92%)
          Length = 760

 Score =  413 bits (1062), Expect = e-116
 Identities = 209/252 (82%), Positives = 215/252 (84%), Gaps = 25/252 (9%)
 Frame = +1

Query: 1   MAVAKPGVIALFDVDGTLTAPRKVANSEMLGFMQELRKVVTVGVVGGSDLIKISEQLGST 60
           MA   PGV+ALFDVDGTLTAPRK    EML FMQ+LRK VTVGVVGGSDL+KISEQLG T
Sbjct: 4   MASLNPGVLALFDVDGTLTAPRKGVTPEMLKFMQDLRKFVTVGVVGGSDLVKISEQLGQT 183

Query: 61  VTHDYDYVFSENGLVAHKQGKLIGTESLKTFLGDEKLKEFINFTLHYIADLDIPIKR--- 117
           VT DYDYVFSENGLVAHKQGKLIGT+SLKTF+GDEKLKEFINFTLHYIADLDIPIKR   
Sbjct: 184 VTTDYDYVFSENGLVAHKQGKLIGTQSLKTFVGDEKLKEFINFTLHYIADLDIPIKRLVR 363

Query: 118 ----------------------GTFIEFRSGMLNVSPIGRNCSQEERDEFEKYDKVQNIR 155
                                 GTFIEFRSGMLNVSPIGRNCSQEERDEFEKYDKVQNIR
Sbjct: 364 FSG*SHCYIKLLNPNLCKKKSRGTFIEFRSGMLNVSPIGRNCSQEERDEFEKYDKVQNIR 543

Query: 156 PKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDGFNEIHFFGDKTYKGGN 215
            KMVS+LREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDGFNEIHFFGDKTYKGGN
Sbjct: 544 SKMVSILREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDGFNEIHFFGDKTYKGGN 723

Query: 216 DHEIYESERTIG 227
           DHEIYESERTIG
Sbjct: 724 DHEIYESERTIG 759


>AW574030 similar to GP|3851530|gb| nodulin {Glycine max}, partial (39%)
          Length = 707

 Score = 33.1 bits (74), Expect = 0.10
 Identities = 18/60 (30%), Positives = 29/60 (48%)
 Frame = +3

Query: 15  DGTLTAPRKVANSEMLGFMQELRKVVTVGVVGGSDLIKISEQLGSTVTHDYDYVFSENGL 74
           D T  A ++ A +E+    +E   +VTVG   G  + K+   LG+  T   DY+    G+
Sbjct: 462 DATFYASKQAAEAELYAKKKEAEGIVTVGQAQGVYVSKLLNALGNDYTAVRDYLMINGGM 641


>TC93852 
          Length = 490

 Score = 31.2 bits (69), Expect = 0.39
 Identities = 22/82 (26%), Positives = 39/82 (46%)
 Frame = -2

Query: 115 IKRGTFIEFRSGMLNVSPIGRNCSQEERDEFEKYDKVQNIRPKMVSVLREKFAHLNLTFS 174
           I R  F +F S +  ++P    C+   +       ++ NI+ K+V++L      L  ++S
Sbjct: 468 ITRSQFFQFISSLHTITPFAEKCTHFSQ-------QIYNIQFKVVTMLE---F*LIFSYS 319

Query: 175 IGGQISFDVFPQGWDKTYCLRY 196
           IG  I   + P G   T C+R+
Sbjct: 318 IGNIIQNSLNPNGILNTDCVRF 253


>TC84479 ENBP1
          Length = 5108

 Score = 31.2 bits (69), Expect = 0.39
 Identities = 14/47 (29%), Positives = 25/47 (52%)
 Frame = +1

Query: 149  DKVQNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLR 195
            D+VQN++PK+      K    N+    G ++  +   +GW K +CL+
Sbjct: 1843 DEVQNVKPKLGRPKGSKNKKKNIAGEDGNKLHKEKKRRGWPKGFCLK 1983


>TC92300 similar to GP|22136838|gb|AAM91763.1 unknown protein {Arabidopsis
           thaliana}, partial (7%)
          Length = 989

 Score = 28.5 bits (62), Expect = 2.5
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -2

Query: 177 GQISFDVFPQGWDKTYC 193
           GQ+ F VFP+ W++ +C
Sbjct: 685 GQVPFTVFPKSWERVHC 635


>BF648394 
          Length = 650

 Score = 28.1 bits (61), Expect = 3.3
 Identities = 16/54 (29%), Positives = 30/54 (54%), Gaps = 1/54 (1%)
 Frame = -3

Query: 151 VQNIRPKMVSVLREKFAHLNLTFSIGGQIS-FDVFPQGWDKTYCLRYLDGFNEI 203
           +Q    + VSVL  +F ++ L   IGG +S + +     ++T+C + L  +N+I
Sbjct: 540 IQTTFGQSVSVLEHRFKYVTLYSGIGGHVSRYALDNIALEETHCRKTLCMYNDI 379


>TC90853 similar to GP|2342427|dbj|BAA21857.1 NPK1-related protein kinase 3
           {Arabidopsis thaliana}, partial (22%)
          Length = 746

 Score = 27.7 bits (60), Expect = 4.3
 Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 5/70 (7%)
 Frame = +3

Query: 140 EERDEFEKYDKVQNIRPKMVSVLREKFAHLNLTFSIGGQIS-----FDVFPQGWDKTYCL 194
           EE  +  K  K  NI   + +   E   ++ L F  GG IS     F  FP+    TY  
Sbjct: 414 EEEVKLLKNLKHPNIVRYLGTAREEDSLNILLEFVPGGSISSLLGKFGSFPESGITTYTK 593

Query: 195 RYLDGFNEIH 204
           + LDG   +H
Sbjct: 594 QLLDGLEYLH 623


>AJ499680 
          Length = 527

 Score = 26.9 bits (58), Expect = 7.3
 Identities = 14/47 (29%), Positives = 23/47 (48%)
 Frame = -1

Query: 129 NVSPIGRNCSQEERDEFEKYDKVQNIRPKMVSVLREKFAHLNLTFSI 175
           N+SP   +   +   E   Y K   +   ++  LREKF H+N+  S+
Sbjct: 158 NISPSFISKRTKHARERADYLKSTRLMKNIIRCLREKFRHVNIFISL 18


>TC77894 similar to GP|12583793|gb|AAG59645.1 hypothetical protein {Oryza
           sativa}, partial (84%)
          Length = 837

 Score = 26.9 bits (58), Expect = 7.3
 Identities = 13/44 (29%), Positives = 21/44 (47%)
 Frame = -3

Query: 146 EKYDKVQNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWD 189
           ++Y  V+N   ++V      F+HL L  S+    + D F   WD
Sbjct: 172 DQYQPVRNCETEIVHFFSFSFSHLKLK*SLNW*ENLDEFEVNWD 41


>BQ751247 similar to GP|21110151|gb| conserved hypothetical protein
           {Xanthomonas axonopodis pv. citri str. 306}, partial
           (5%)
          Length = 787

 Score = 26.6 bits (57), Expect = 9.5
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -2

Query: 213 GGNDHEIYESERTIGHTVTSPEDTIKQC 240
           G  DH +  + R + HT+  P+   K+C
Sbjct: 660 GSADHGLQNTSRHVSHTIKRPDSCGKRC 577


>TC82470 homologue to GP|23497460|gb|AAN37003.1 hypothetical protein
           {Plasmodium falciparum 3D7}, partial (8%)
          Length = 1064

 Score = 26.6 bits (57), Expect = 9.5
 Identities = 16/48 (33%), Positives = 25/48 (51%), Gaps = 4/48 (8%)
 Frame = -2

Query: 91  FLGDEKLKEFINFTLHYIADLD----IPIKRGTFIEFRSGMLNVSPIG 134
           FL  + L  F+NF+LH++A  D    IP       +  + +LN+S  G
Sbjct: 343 FLCYKILDTFVNFSLHFLASFDNSSNIPNFLFLIFKIFAALLNISLYG 200


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.320    0.140    0.405 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,527,403
Number of Sequences: 36976
Number of extensions: 81371
Number of successful extensions: 333
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 331
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 332
length of query: 247
length of database: 9,014,727
effective HSP length: 94
effective length of query: 153
effective length of database: 5,538,983
effective search space: 847464399
effective search space used: 847464399
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.6 bits)