TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0283.14.1
         (63 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC88731 similar to GP|21593927|gb|AAM65892.1 unknown {Arabidopsi...    30  0.24
BF634777 homologue to PIR|E86221|E862 hypothetical protein [impo...    25  4.5
AL375221 similar to GP|3128181|gb|A unknown protein {Arabidopsis...    25  5.9
BE202801 homologue to GP|12322744|gb| hypothetical protein; 7880...    25  5.9
TC84596 weakly similar to GP|17064866|gb|AAL32587.1 Unknown prot...    25  5.9
TC89706 similar to GP|3128181|gb|AAC16085.1| unknown protein {Ar...    25  5.9
TC92989 similar to GP|20466294|gb|AAM20464.1 unknown protein {Ar...    25  7.7
BF634519 homologue to GP|18146782|dbj PBng143 {Vigna radiata}, p...    25  7.7

>TC88731 similar to GP|21593927|gb|AAM65892.1 unknown {Arabidopsis
           thaliana}, partial (97%)
          Length = 1189

 Score = 29.6 bits (65), Expect = 0.24
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = +3

Query: 17  LAKNMKEQLGDGATFQGIKKAGHLVHLERP 46
           +A  MKE LG  +T Q +   GHL HL  P
Sbjct: 729 VATYMKEHLGGKSTVQWLDTEGHLPHLSAP 818


>BF634777 homologue to PIR|E86221|E862 hypothetical protein [imported] -
           Arabidopsis thaliana, partial (22%)
          Length = 677

 Score = 25.4 bits (54), Expect = 4.5
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -1

Query: 42  HLERPCVYNRCLKRFIASFF 61
           H  RPC YNR L  ++  FF
Sbjct: 578 HFTRPCKYNRRLX*YLEFFF 519


>AL375221 similar to GP|3128181|gb|A unknown protein {Arabidopsis
          thaliana}, partial (17%)
          Length = 368

 Score = 25.0 bits (53), Expect = 5.9
 Identities = 10/23 (43%), Positives = 15/23 (64%)
 Frame = -3

Query: 25 LGDGATFQGIKKAGHLVHLERPC 47
          L +G  ++  ++AGH V L RPC
Sbjct: 81 LPEGEDWREAERAGHRVSLPRPC 13


>BE202801 homologue to GP|12322744|gb| hypothetical protein; 78804-81924
           {Arabidopsis thaliana}, partial (3%)
          Length = 506

 Score = 25.0 bits (53), Expect = 5.9
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +2

Query: 39  HLVHLERPCVYNRCLK 54
           H V L  PC++NRC++
Sbjct: 143 HKVVLRLPCIHNRCME 190


>TC84596 weakly similar to GP|17064866|gb|AAL32587.1 Unknown protein
          {Arabidopsis thaliana}, partial (40%)
          Length = 863

 Score = 25.0 bits (53), Expect = 5.9
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +3

Query: 39 HLVHLERPCVYNRC 52
          H  HLE PC ++RC
Sbjct: 27 HKTHLENPCHHHRC 68


>TC89706 similar to GP|3128181|gb|AAC16085.1| unknown protein {Arabidopsis
           thaliana}, partial (83%)
          Length = 582

 Score = 25.0 bits (53), Expect = 5.9
 Identities = 10/23 (43%), Positives = 15/23 (64%)
 Frame = -2

Query: 25  LGDGATFQGIKKAGHLVHLERPC 47
           L +G  ++  ++AGH V L RPC
Sbjct: 104 LPEGEDWREAERAGHRVSLPRPC 36


>TC92989 similar to GP|20466294|gb|AAM20464.1 unknown protein {Arabidopsis
           thaliana}, partial (39%)
          Length = 671

 Score = 24.6 bits (52), Expect = 7.7
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -2

Query: 21  MKEQLGDGATFQGIKKAGHLVHLERP 46
           M E L +   +QG     HL H+E+P
Sbjct: 481 MMEDLQEAQVYQGTSSQLHL*HIEKP 404


>BF634519 homologue to GP|18146782|dbj PBng143 {Vigna radiata}, partial (44%)
          Length = 692

 Score = 24.6 bits (52), Expect = 7.7
 Identities = 15/53 (28%), Positives = 25/53 (46%)
 Frame = +2

Query: 2   IHLLWGENDQIFKRELAKNMKEQLGDGATFQGIKKAGHLVHLERPCVYNRCLK 54
           I LLW E    ++ EL+  M ++LGD      +     L ++ R   Y R ++
Sbjct: 404 IKLLWEEFMLFYQMELSSPMSKRLGDYMNKLVLVGFTPLQNMNRTTTYGRNIR 562


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.328    0.142    0.447 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,180,372
Number of Sequences: 36976
Number of extensions: 19977
Number of successful extensions: 134
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 134
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 134
length of query: 63
length of database: 9,014,727
effective HSP length: 39
effective length of query: 24
effective length of database: 7,572,663
effective search space: 181743912
effective search space used: 181743912
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 51 (24.3 bits)