
BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0281a.2
(153 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC77441 similar to GP|21592359|gb|AAM64310.1 unknown {Arabidopsi... 286 2e-78
TC86045 similar to PIR|T46225|T46225 alpha NAC-like protein - Ar... 42 7e-05
BF635065 weakly similar to GP|11037008|gb latent nuclear antigen... 38 0.002
TC80039 homologue to GP|6437558|gb|AAF08585.1| putative ATPase (... 37 0.002
TC91658 similar to GP|14329812|emb|CAC40753. putative nucleosome... 37 0.002
TC89427 weakly similar to GP|4557063|gb|AAD22502.1| expressed pr... 37 0.003
TC79306 similar to PIR|F86397|F86397 protein T7N9.16 [imported] ... 36 0.005
TC93070 weakly similar to GP|17065230|gb|AAL32769.1 Unknown prot... 36 0.005
CB892018 36 0.005
TC77139 weakly similar to GP|12324751|gb|AAG52333.1 unknown prot... 36 0.007
BE248780 similar to GP|5929884|gb|A nucleolin-related protein NR... 35 0.009
TC80893 similar to GP|4557063|gb|AAD22502.1| expressed protein {... 35 0.009
TC83157 similar to GP|21595368|gb|AAM66095.1 unknown {Arabidopsi... 35 0.009
TC89048 weakly similar to PIR|T46215|T46215 hypothetical protein... 35 0.012
TC81816 similar to GP|8096269|dbj|BAA95789.1 KED {Nicotiana taba... 35 0.012
TC76959 similar to GP|1841870|gb|AAB68395.1| elongation factor 1... 35 0.015
CA920908 homologue to PIR|T06377|T06 SAR DNA-binding protein-1 -... 35 0.015
TC82935 similar to GP|15150635|gb|AAK85442.1 Hypothetical protei... 35 0.015
TC76961 similar to GP|1841870|gb|AAB68395.1| elongation factor 1... 35 0.015
TC80288 weakly similar to PIR|T06029|T06029 hypothetical protein... 35 0.015
>TC77441 similar to GP|21592359|gb|AAM64310.1 unknown {Arabidopsis
thaliana}, partial (98%)
Length = 1046
Score = 286 bits (733), Expect = 2e-78
Identities = 140/153 (91%), Positives = 149/153 (96%)
Frame = +3
Query: 1 MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRRDGQDTQDELKRRNLR 60
MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPR+DGQDTQDELKRRNLR
Sbjct: 90 MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKDGQDTQDELKRRNLR 269
Query: 61 DELEERERRHFSSKNKSYSDDRDHGKSSHLFLEGTKRDVEDHIVARSVDADDSDVEVKSD 120
DEL+ERERRHFSSKNKSY+DDRDHG+S HLFLEGTKRD+ED+I+ RSVDADDSDVEV SD
Sbjct: 270 DELDERERRHFSSKNKSYNDDRDHGRSGHLFLEGTKRDIEDNIIPRSVDADDSDVEVNSD 449
Query: 121 EESDDDDDDEDDTEALLAELEQIKKERAEEKLR 153
+ES DDDDDEDDTEALLAELEQIKKERA+EKLR
Sbjct: 450 DES-DDDDDEDDTEALLAELEQIKKERAQEKLR 545
>TC86045 similar to PIR|T46225|T46225 alpha NAC-like protein - Arabidopsis
thaliana, partial (69%)
Length = 1166
Score = 42.4 bits (98), Expect = 7e-05
Identities = 22/54 (40%), Positives = 32/54 (58%)
Frame = +1
Query: 100 EDHIVARSVDADDSDVEVKSDEESDDDDDDEDDTEALLAELEQIKKERAEEKLR 153
+D + V DD D E D++ DDDD+D+DD E LA + K+ R+E+K R
Sbjct: 202 DDAPIIEDVKDDDKDDE---DDDEDDDDEDDDDKEDALAGADGSKQSRSEKKSR 354
>BF635065 weakly similar to GP|11037008|gb latent nuclear antigen {Human
herpesvirus 8}, partial (3%)
Length = 681
Score = 37.7 bits (86), Expect = 0.002
Identities = 21/63 (33%), Positives = 38/63 (59%)
Frame = +2
Query: 89 HLFLEGTKRDVEDHIVARSVDADDSDVEVKSDEESDDDDDDEDDTEALLAELEQIKKERA 148
HL ++ V + ++ + + DD D +V+ DEE+D++DD+E+ A +EQ +E+
Sbjct: 302 HLMAFKSQHIVNNPVIPQEQEHDDDDDDVEDDEETDEEDDNEE------AAVEQ--EEQK 457
Query: 149 EEK 151
EEK
Sbjct: 458 EEK 466
Score = 30.4 bits (67), Expect = 0.29
Identities = 17/56 (30%), Positives = 28/56 (49%), Gaps = 9/56 (16%)
Frame = +2
Query: 101 DHIVARSVDADDSDVEVKSDEESDDDDDD---------EDDTEALLAELEQIKKER 147
+H++A ++ + ++E DDDDDD EDD E E E+ K+E+
Sbjct: 299 EHLMAFKSQHIVNNPVIPQEQEHDDDDDDVEDDEETDEEDDNEEAAVEQEEQKEEK 466
>TC80039 homologue to GP|6437558|gb|AAF08585.1| putative ATPase (ISW2-like)
{Arabidopsis thaliana}, partial (47%)
Length = 1840
Score = 37.4 bits (85), Expect = 0.002
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 12/70 (17%)
Frame = +3
Query: 95 TKRDVEDHIVARSVDADDSDV--EVKSDEESDDDDDDEDD----------TEALLAELEQ 142
TK+ VE VARS +DD D E +D++ D++D+ D +A L ELE+
Sbjct: 177 TKKKVE--AVARSAGSDDEDAPDEPAADDDGVDEEDENQDESVNPEISKREKARLKELER 350
Query: 143 IKKERAEEKL 152
+KK++ +E L
Sbjct: 351 LKKQKVQEIL 380
>TC91658 similar to GP|14329812|emb|CAC40753. putative nucleosome assembly
protein 1 {Atropa belladonna}, partial (46%)
Length = 583
Score = 37.4 bits (85), Expect = 0.002
Identities = 14/27 (51%), Positives = 20/27 (73%)
Frame = +2
Query: 108 VDADDSDVEVKSDEESDDDDDDEDDTE 134
VD DD D + + D++ DDDDDDE+D +
Sbjct: 83 VDEDDEDGDEEDDDDDDDDDDDEEDED 163
Score = 33.1 bits (74), Expect = 0.045
Identities = 15/43 (34%), Positives = 26/43 (59%)
Frame = +2
Query: 109 DADDSDVEVKSDEESDDDDDDEDDTEALLAELEQIKKERAEEK 151
++D D+EV D+E D++DD+DD + E ++ +E E K
Sbjct: 59 ESDFDDIEVDEDDEDGDEEDDDDDDDDDDDEEDEDDEEEDEGK 187
Score = 30.8 bits (68), Expect = 0.22
Identities = 9/27 (33%), Positives = 19/27 (70%)
Frame = +2
Query: 108 VDADDSDVEVKSDEESDDDDDDEDDTE 134
++ D+ D + +++ DDDDDD+D+ +
Sbjct: 77 IEVDEDDEDGDEEDDDDDDDDDDDEED 157
Score = 26.9 bits (58), Expect = 3.2
Identities = 13/41 (31%), Positives = 23/41 (55%), Gaps = 5/41 (12%)
Frame = +2
Query: 99 VEDHIVARSV-----DADDSDVEVKSDEESDDDDDDEDDTE 134
+ D I+ +V +A +SD + +E D+D D+EDD +
Sbjct: 5 IRDKIIPHAVSWFTGEAGESDFDDIEVDEDDEDGDEEDDDD 127
>TC89427 weakly similar to GP|4557063|gb|AAD22502.1| expressed protein
{Arabidopsis thaliana}, partial (50%)
Length = 753
Score = 37.0 bits (84), Expect = 0.003
Identities = 27/95 (28%), Positives = 40/95 (41%)
Frame = +1
Query: 40 TLKPRRDGQDTQDELKRRNLRDELEERERRHFSSKNKSYSDDRDHGKSSHLFLEGTKRDV 99
T + +DG +T+D+ + D +E + ++ +S D D + D
Sbjct: 277 TCEENKDGSETEDDDDEDDDDDVNDEDD-----DNDEDFSGDEDDEDA----------DP 411
Query: 100 EDHIVARSVDADDSDVEVKSDEESDDDDDDEDDTE 134
ED V D D DE+ DDDDDD DD E
Sbjct: 412 EDDPVPNGAGGSDDD-----DEDDDDDDDDNDDGE 501
Score = 30.4 bits (67), Expect = 0.29
Identities = 32/117 (27%), Positives = 47/117 (39%), Gaps = 11/117 (9%)
Frame = +1
Query: 46 DGQDTQDELKRRNLRDELEERERRHFSSKNKSYS---DDRDHGKSSHLFLEGTKRDVEDH 102
DG+ D+L + N H +NK S DD D + E D ED
Sbjct: 235 DGRFPLDQLSKGN-----------HTCEENKDGSETEDDDDEDDDDDVNDEDDDND-EDF 378
Query: 103 IVARSVDADDSDVEVKSD--------EESDDDDDDEDDTEALLAELEQIKKERAEEK 151
S D DD D + + D + DD+DDD+DD + E E +E +++
Sbjct: 379 ----SGDEDDEDADPEDDPVPNGAGGSDDDDEDDDDDDDDNDDGEDEDEDEEEDDDE 537
>TC79306 similar to PIR|F86397|F86397 protein T7N9.16 [imported] -
Arabidopsis thaliana, partial (2%)
Length = 826
Score = 36.2 bits (82), Expect = 0.005
Identities = 42/158 (26%), Positives = 54/158 (33%), Gaps = 46/158 (29%)
Frame = -2
Query: 42 KPRRDGQDTQ---------DELKRRNLRDELEERERRH-------------------FSS 73
K RDG D + D R+ LRDE + ER+H
Sbjct: 813 KSSRDGDDLRETKTRRIEDDRTGRKTLRDEDDFGERKHSRDEGRHREAQNKRDGDGSVEI 634
Query: 74 KNKSYSDDRDHGKSSHLFLEGTKRDVEDHIVARSVDADDSDVEVKSDEESD--------D 125
KN Y DDR K+S R+ +D V R+ DD E KS + D
Sbjct: 633 KNSRYEDDRKERKNS--------REEDDRKVRRNSREDDDHRERKSSRDEDVRGERKYRG 478
Query: 126 DDD----------DEDDTEALLAELEQIKKERAEEKLR 153
DDD D+DD + +R E K R
Sbjct: 477 DDDYHGERKRSRRDDDDGHGERRHYRRDDDDRGERKHR 364
>TC93070 weakly similar to GP|17065230|gb|AAL32769.1 Unknown protein
{Arabidopsis thaliana}, partial (19%)
Length = 679
Score = 36.2 bits (82), Expect = 0.005
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +1
Query: 109 DADDSDVEVKSDEESDDDDDDEDDTEALLAE 139
D +D D + D++ DDDDDDEDD + AE
Sbjct: 256 DDEDEDEDEDEDDDDDDDDDDEDDDDDGFAE 348
Score = 34.7 bits (78), Expect = 0.015
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = +1
Query: 98 DVEDHIVARSVDADDSDVEVKSDEESDDDDDDEDDTE 134
D +D I +D +D + E + ++E DDDDDD+DD +
Sbjct: 220 DSDDEI--EEMDFEDDEDEDEDEDEDDDDDDDDDDED 324
Score = 32.7 bits (73), Expect = 0.058
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +1
Query: 109 DADDSDVEVKSDEESDDDDDDEDDTEALLAELEQIKKER 147
D D+ + E + D++ DDDDD++DD + + K++
Sbjct: 259 DEDEDEDEDEDDDDDDDDDDEDDDDDGFAEPTDLNAKDK 375
Score = 32.0 bits (71), Expect = 0.100
Identities = 17/54 (31%), Positives = 29/54 (53%)
Frame = +1
Query: 98 DVEDHIVARSVDADDSDVEVKSDEESDDDDDDEDDTEALLAELEQIKKERAEEK 151
++E+ D D+ + E D++ DDD+DD+DD A +L K +R + K
Sbjct: 232 EIEEMDFEDDEDEDEDEDEDDDDDDDDDDEDDDDDGFAEPTDL-NAKDKRLKSK 390
>CB892018
Length = 389
Score = 36.2 bits (82), Expect = 0.005
Identities = 29/84 (34%), Positives = 38/84 (44%), Gaps = 3/84 (3%)
Frame = +1
Query: 45 RDGQDTQDELKRR---NLRDELEERERRHFSSKNKSYSDDRDHGKSSHLFLEGTKRDVED 101
RDG+ +DE RR +LRDE ERRH K++ Y R H RD +D
Sbjct: 49 RDGKHKRDEEDRREKKSLRDEDVRGERRH--GKDEDYPTGRKH-----------LRDEDD 189
Query: 102 HIVARSVDADDSDVEVKSDEESDD 125
H + +D E KS + DD
Sbjct: 190 HGERKIRRIEDEHAERKSLRDGDD 261
Score = 33.1 bits (74), Expect = 0.045
Identities = 27/91 (29%), Positives = 42/91 (45%), Gaps = 5/91 (5%)
Frame = +1
Query: 44 RRDGQDTQDELKRRNLRDELEERERR-----HFSSKNKSYSDDRDHGKSSHLFLEGTKRD 98
RR G+D R++LRDE + ER+ ++ KS D D+G+ +L + D
Sbjct: 127 RRHGKDEDYPTGRKHLRDEDDHGERKIRRIEDEHAERKSLRDGDDYGERKNL-----RDD 291
Query: 99 VEDHIVARSVDADDSDVEVKSDEESDDDDDD 129
V S+D D V+ ++ S D DD
Sbjct: 292 VGSRERKNSLDGD-----VRGEKRSSRDGDD 369
Score = 29.6 bits (65), Expect = 0.50
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 5/54 (9%)
Frame = +1
Query: 38 HTTLKPRRDGQDTQDELKRRNLRDELEERERRH-----FSSKNKSYSDDRDHGK 86
H K RDG D + R+NLRD++ RER++ + +S D D+G+
Sbjct: 226 HAERKSLRDGDDYGE---RKNLRDDVGSRERKNSLDGDVRGEKRSSRDGDDYGE 378
>TC77139 weakly similar to GP|12324751|gb|AAG52333.1 unknown protein;
13405-15968 {Arabidopsis thaliana}, partial (55%)
Length = 2340
Score = 35.8 bits (81), Expect = 0.007
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 7/72 (9%)
Frame = +1
Query: 86 KSSHLFLEGTKRDVEDHIVARSVDADDSDVEVKSDEESDDDDDDEDDTE-------ALLA 138
KS L E +R + + A + DD V K + DDDDDEDD +
Sbjct: 310 KSLELHSEDRRRKILEARTAAEAEFDDGPVRSKQRSRNYDDDDDEDDEDVDRSGENGKAE 489
Query: 139 ELEQIKKERAEE 150
E++++KK + ++
Sbjct: 490 EVKKVKKPKVKK 525
>BE248780 similar to GP|5929884|gb|A nucleolin-related protein NRP {Rattus
norvegicus}, partial (4%)
Length = 561
Score = 35.4 bits (80), Expect = 0.009
Identities = 26/81 (32%), Positives = 38/81 (46%)
Frame = +2
Query: 69 RHFSSKNKSYSDDRDHGKSSHLFLEGTKRDVEDHIVARSVDADDSDVEVKSDEESDDDDD 128
R+FSS + DH K EG ++ED D DD D + DEE D +D
Sbjct: 272 RYFSSSKQD-----DHIK------EGGTHEIEDE--DDDSDGDDDDDDDDYDEEEGDYED 412
Query: 129 DEDDTEALLAELEQIKKERAE 149
++DDT A+ + + +E E
Sbjct: 413 EDDDTVAVSSRKKVYTEEEKE 475
Score = 28.5 bits (62), Expect = 1.1
Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 7/87 (8%)
Frame = +2
Query: 72 SSKNKSYSDDRDHGKSSHLFLEGTKRDVEDHIVARSV-DADDSDVEVKSDEESDDDDDD- 129
+SK S HG+ + +K+D DHI + +D D + D++ DDDD D
Sbjct: 230 NSKPTSAFGQWHHGR----YFSSSKQD--DHIKEGGTHEIEDEDDDSDGDDDDDDDDYDE 391
Query: 130 -----EDDTEALLAELEQIKKERAEEK 151
ED+ + +A + K EEK
Sbjct: 392 EEGDYEDEDDDTVAVSSRKKVYTEEEK 472
>TC80893 similar to GP|4557063|gb|AAD22502.1| expressed protein {Arabidopsis
thaliana}, partial (39%)
Length = 883
Score = 35.4 bits (80), Expect = 0.009
Identities = 23/91 (25%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Frame = +3
Query: 44 RRDGQDTQDELKRRNLRDELEERERRHFSS-KNKSYSDDRDHGKSSHLFLEGTKRDVEDH 102
+ D +D +D+ +++DE ++ E +S + + D D +++ G D ED
Sbjct: 312 KSDTEDDEDDDDDDDVQDEDDDGEEEDYSGDEGEEEGDPEDDPEANGA---GGSDDGEDD 482
Query: 103 IVARSVDADDSDVEVKSDEESDDDDDDEDDT 133
D D+ D E DEE ++D++++D+T
Sbjct: 483 ----DDDGDEEDEEDGEDEEDEEDEEEDDET 563
Score = 31.2 bits (69), Expect = 0.17
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +3
Query: 116 EVKSDEESDDDDDDEDDTE 134
E KSD E D+DDDD+DD +
Sbjct: 306 ENKSDTEDDEDDDDDDDVQ 362
Score = 30.8 bits (68), Expect = 0.22
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = +3
Query: 101 DHIVARSVDADDSDVEVKSDEESDDDDD--DEDDTEALLAELEQIKKERAEEK 151
+H++ R ++ + + DE+ DDDDD DEDD E E + EE+
Sbjct: 273 EHLLGRKPAYKENKSDTEDDEDDDDDDDVQDEDDD----GEEEDYSGDEGEEE 419
>TC83157 similar to GP|21595368|gb|AAM66095.1 unknown {Arabidopsis
thaliana}, partial (57%)
Length = 1108
Score = 35.4 bits (80), Expect = 0.009
Identities = 26/81 (32%), Positives = 38/81 (46%)
Frame = +3
Query: 69 RHFSSKNKSYSDDRDHGKSSHLFLEGTKRDVEDHIVARSVDADDSDVEVKSDEESDDDDD 128
R+FSS + DH K EG ++ED D DD D + DEE D +D
Sbjct: 279 RYFSSSKQD-----DHIK------EGGTHEIEDE--DDDSDGDDDDDDDDYDEEEGDYED 419
Query: 129 DEDDTEALLAELEQIKKERAE 149
++DDT A+ + + +E E
Sbjct: 420 EDDDTVAVSSRKKVYTEEEKE 482
Score = 28.5 bits (62), Expect = 1.1
Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 7/87 (8%)
Frame = +3
Query: 72 SSKNKSYSDDRDHGKSSHLFLEGTKRDVEDHIVARSV-DADDSDVEVKSDEESDDDDDD- 129
+SK S HG+ + +K+D DHI + +D D + D++ DDDD D
Sbjct: 237 NSKPTSAFGQWHHGR----YFSSSKQD--DHIKEGGTHEIEDEDDDSDGDDDDDDDDYDE 398
Query: 130 -----EDDTEALLAELEQIKKERAEEK 151
ED+ + +A + K EEK
Sbjct: 399 EEGDYEDEDDDTVAVSSRKKVYTEEEK 479
>TC89048 weakly similar to PIR|T46215|T46215 hypothetical protein T8P19.220
- Arabidopsis thaliana, partial (35%)
Length = 1329
Score = 35.0 bits (79), Expect = 0.012
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Frame = +2
Query: 92 LEGTKRDVE--DHIVARSVDADDSDVEVKSDEESDDDDDDEDDTEALLAELEQIKKERAE 149
+E T++D E + + +D + + DE D+DD D+D+ E E + +KKE +E
Sbjct: 386 VEVTEQDAEVAESDEKKEIDGHEDSDKDDEDEGGDEDDADDDEEEDAGEEKKGVKKESSE 565
Query: 150 EK 151
+K
Sbjct: 566 KK 571
>TC81816 similar to GP|8096269|dbj|BAA95789.1 KED {Nicotiana tabacum},
partial (13%)
Length = 663
Score = 35.0 bits (79), Expect = 0.012
Identities = 25/110 (22%), Positives = 49/110 (43%)
Frame = +3
Query: 42 KPRRDGQDTQDELKRRNLRDELEERERRHFSSKNKSYSDDRDHGKSSHLFLEGTKRDVED 101
K ++D + + E K N++ E E+ + + K K + ++ GK E +D E+
Sbjct: 237 KDKKDKEKKKKEKKEENVKGEEEDGDEK--KDKEKKKKEKKEKGK------EDKDKDGEE 392
Query: 102 HIVARSVDADDSDVEVKSDEESDDDDDDEDDTEALLAELEQIKKERAEEK 151
D E K D+ DDD+ ++ + + ++ KKE E++
Sbjct: 393 K-------KSKKDKEKKKDKNEDDDEGEDGSKKKKNKDKKEKKKEEDEKE 521
>TC76959 similar to GP|1841870|gb|AAB68395.1| elongation factor 1-beta
{Pimpinella brachycarpa}, complete
Length = 996
Score = 34.7 bits (78), Expect = 0.015
Identities = 22/59 (37%), Positives = 30/59 (50%)
Frame = +2
Query: 93 EGTKRDVEDHIVARSVDADDSDVEVKSDEESDDDDDDEDDTEALLAELEQIKKERAEEK 151
EG+ VE +VA A + K+ E DDDDDD D L E + +K+ AEE+
Sbjct: 287 EGSGVTVESSLVAEDAVATPPVSDTKAAEAEDDDDDDVD----LFGEETEEEKKAAEER 451
>CA920908 homologue to PIR|T06377|T06 SAR DNA-binding protein-1 - garden pea,
partial (37%)
Length = 748
Score = 34.7 bits (78), Expect = 0.015
Identities = 44/156 (28%), Positives = 63/156 (40%), Gaps = 36/156 (23%)
Frame = -2
Query: 32 SRDIASHTTLKPR----RDGQDTQDELKRR-----NLRDELEERERRHFSSKNK------ 76
SR +A+ T L R DGQD L+ R LR+ LE +E F+ K
Sbjct: 465 SRSLAAKTALAIRCDALGDGQDNTMGLENRAKLEARLRN-LEGKELGRFAGSAKGKPKIE 289
Query: 77 SYSDDRDHGKSSHLFLEGTKRDVEDHIVARSVD-ADDSDVEV-------------KSDEE 122
+Y DR G + T D I+ + D A D D E K E+
Sbjct: 288 AYDKDRKKGAGGLITPAKTYNTAADSIIDKKSDSAMDEDTEELSAADKKKEKKEKKKKEK 109
Query: 123 SDDDDD-------DEDDTEALLAELEQIKKERAEEK 151
+++D DED E A+ ++ KKE+ E+K
Sbjct: 108 KEEEDTQKSNTAMDEDTQEPSAADKKKEKKEKKEKK 1
>TC82935 similar to GP|15150635|gb|AAK85442.1 Hypothetical protein C07H6.4
{Caenorhabditis elegans}, partial (2%)
Length = 807
Score = 34.7 bits (78), Expect = 0.015
Identities = 27/102 (26%), Positives = 47/102 (45%)
Frame = +3
Query: 45 RDGQDTQDELKRRNLRDELEERERRHFSSKNKSYSDDRDHGKSSHLFLEGTKRDVEDHIV 104
RDG ++EL+ ++ +++R +K D KS F E K
Sbjct: 342 RDGDRAENELENSRVQGGDVDKDRTLDVDPDKKNDRISDPDKS---FDEHKKEQPR---- 500
Query: 105 ARSVDADDSDVEVKSDEESDDDDDDEDDTEALLAELEQIKKE 146
R++D + ++ SD D +D+ ED+ E + L+Q+KKE
Sbjct: 501 -RNIDLNVTNQNSPSDSNGDHNDEVEDELERSIQLLDQLKKE 623
>TC76961 similar to GP|1841870|gb|AAB68395.1| elongation factor 1-beta
{Pimpinella brachycarpa}, partial (95%)
Length = 815
Score = 34.7 bits (78), Expect = 0.015
Identities = 22/59 (37%), Positives = 30/59 (50%)
Frame = +1
Query: 93 EGTKRDVEDHIVARSVDADDSDVEVKSDEESDDDDDDEDDTEALLAELEQIKKERAEEK 151
EG+ VE +VA A + K+ E DDDDDD D L E + +K+ AEE+
Sbjct: 265 EGSGVTVESSLVAEDAVATPPVSDTKAAEAEDDDDDDVD----LFGEETEEEKKAAEER 429
>TC80288 weakly similar to PIR|T06029|T06029 hypothetical protein T28I19.100
- Arabidopsis thaliana, partial (14%)
Length = 1460
Score = 34.7 bits (78), Expect = 0.015
Identities = 28/114 (24%), Positives = 52/114 (45%), Gaps = 3/114 (2%)
Frame = +3
Query: 41 LKPRRDGQDTQDELKRRNLRDELEERERRHFSSKNKSYSDDRDHGKSSHLFLEGTKRDVE 100
++ +R+ + Q E + N + EE E + + ++ HG E +VE
Sbjct: 438 MQNKREHDEQQQEGEEGNKHETEEESEDNVHERREEQDEEENKHGAEVQEENESKSEEVE 617
Query: 101 DHIVARSVDADDSDVEVKSDEESDDDD---DDEDDTEALLAELEQIKKERAEEK 151
D V+ D++D E KS+ ++D +D D+E D E + + + + EEK
Sbjct: 618 DE--GGDVEIDENDHE-KSEADNDREDEVVDEEKDKEEEGDDETENEDKEDEEK 770
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.306 0.127 0.347
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,223,494
Number of Sequences: 36976
Number of extensions: 37664
Number of successful extensions: 1597
Number of sequences better than 10.0: 241
Number of HSP's better than 10.0 without gapping: 629
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1006
length of query: 153
length of database: 9,014,727
effective HSP length: 88
effective length of query: 65
effective length of database: 5,760,839
effective search space: 374454535
effective search space used: 374454535
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (22.0 bits)
S2: 54 (25.4 bits)
Lotus: description of TM0281a.2