Lotus
BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0280a.5
         (151 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC85432 homologue to GP|7381203|gb|AAF61434.1| pathogenesis-rela...   232  4e-62
TC87236 homologue to GP|7381203|gb|AAF61434.1| pathogenesis-rela...   223  2e-59
TC81815 similar to GP|7381203|gb|AAF61434.1| pathogenesis-relate...   216  2e-57
BG452227 homologue to GP|7381203|gb| pathogenesis-related protei...   216  4e-57
TC86735 similar to GP|6562381|emb|CAB62537.1 pseudo-hevein {Heve...   184  9e-48
TC85023 weakly similar to GP|7381205|gb|AAF61435.1| pre-hevein-l...   144  1e-35
BF648023 similar to GP|7381203|gb|A pathogenesis-related protein...   143  2e-35
TC90452 weakly similar to GP|19879970|gb|AAM00217.1 class 4 path...   125  5e-30
AJ504099                                                               36  0.005
BQ141924 similar to PIR|F86387|F863 probable Pto kinase interact...    29  0.82
TC81918 similar to GP|21594031|gb|AAM65949.1 unknown {Arabidopsi...    29  0.82
TC93915 similar to GP|10178125|dbj|BAB11537. gene_id:MOP10.2~unk...    29  0.82
TC83159                                                                27  4.1
TC89883 homologue to PIR|C86303|C86303 hypothetical protein AAG0...    27  4.1
TC84760 similar to GP|8567777|gb|AAF76349.1| unknown protein {Ar...    27  4.1
TC77117 similar to GP|9294182|dbj|BAB02084.1 protein kinases-lik...    27  4.1
TC85288 homologue to SP|Q43070|GAE1_PEA UDP-glucose 4-epimerase ...    26  6.9
TC79507 similar to GP|14194103|gb|AAK56246.1 AT3g22390/MCB17_12 ...    25  9.1

>TC85432 homologue to GP|7381203|gb|AAF61434.1| pathogenesis-related protein
           4A {Pisum sativum}, partial (96%)
          Length = 614

 Score =  232 bits (592), Expect = 4e-62
 Identities = 104/141 (73%), Positives = 118/141 (82%)
 Frame = +2

Query: 10  TQRKLSIVAVWWLIAATFANGQSANNVMATYNLYNPQQIGWNLLTAGAYCATWNANKPLA 69
           TQR LS++ + +L+     NGQSANNV ATY+LYNPQ I WN  TA  YCATW+AN+PL+
Sbjct: 29  TQRTLSLLVLCFLVGTMLVNGQSANNVRATYHLYNPQNINWNYNTASVYCATWDANQPLS 208

Query: 70  WRKKYGWTAFCGPAGAHGRDSCGKCLRVRNTATGDEATVRIVDQCANGGLDLDVNVFRRL 129
           WR+KYGWTAFCGP G HGRDSCGKCLRV NTATG +ATVRIVDQCANGGLDLDVNVF ++
Sbjct: 209 WRQKYGWTAFCGPQGPHGRDSCGKCLRVTNTATGAQATVRIVDQCANGGLDLDVNVFNQI 388

Query: 130 DSNGQGNHQGHLTVNYRFVNC 150
           D+NGQG  QGHLTVNY FVNC
Sbjct: 389 DTNGQGYQQGHLTVNYVFVNC 451


>TC87236 homologue to GP|7381203|gb|AAF61434.1| pathogenesis-related protein
           4A {Pisum sativum}, partial (93%)
          Length = 701

 Score =  223 bits (569), Expect = 2e-59
 Identities = 100/142 (70%), Positives = 115/142 (80%)
 Frame = +2

Query: 10  TQRKLSIVAVWWLIAATFANGQSANNVMATYNLYNPQQIGWNLLTAGAYCATWNANKPLA 69
           TQRKLS++ + +L+     +GQSANNV ATYN YNPQ I W+  TA  YCATW+AN+PL+
Sbjct: 8   TQRKLSLLVLCFLVGTMLVSGQSANNVRATYNNYNPQNINWDYNTASVYCATWDANQPLS 187

Query: 70  WRKKYGWTAFCGPAGAHGRDSCGKCLRVRNTATGDEATVRIVDQCANGGLDLDVNVFRRL 129
           WR KYGWTAFCGPAG  GRDSCGKCL V NTATG + TVRIVDQC+NGGLDLDVNVF ++
Sbjct: 188 WRSKYGWTAFCGPAGPTGRDSCGKCLTVTNTATGAQVTVRIVDQCSNGGLDLDVNVFNQI 367

Query: 130 DSNGQGNHQGHLTVNYRFVNCG 151
           D+NGQG   GHLTVNY FVNCG
Sbjct: 368 DTNGQGVQNGHLTVNYSFVNCG 433


>TC81815 similar to GP|7381203|gb|AAF61434.1| pathogenesis-related protein
           4A {Pisum sativum}, partial (84%)
          Length = 578

 Score =  216 bits (551), Expect = 2e-57
 Identities = 97/141 (68%), Positives = 114/141 (80%)
 Frame = +1

Query: 10  TQRKLSIVAVWWLIAATFANGQSANNVMATYNLYNPQQIGWNLLTAGAYCATWNANKPLA 69
           TQRKLS++   +L+    A+ QSAN V +TY+LYNPQ I W+   A  YCATW+AN+PL 
Sbjct: 37  TQRKLSLLVFCFLVGMMLASNQSANGVRSTYHLYNPQNINWDYNRASVYCATWDANQPLE 216

Query: 70  WRKKYGWTAFCGPAGAHGRDSCGKCLRVRNTATGDEATVRIVDQCANGGLDLDVNVFRRL 129
           WRKKYGWTAFCGP G  GRDSCGKCLRV+NTATG + TVRIVDQCANGGLDLDVNVF+R+
Sbjct: 217 WRKKYGWTAFCGPQGPRGRDSCGKCLRVKNTATGAQETVRIVDQCANGGLDLDVNVFKRI 396

Query: 130 DSNGQGNHQGHLTVNYRFVNC 150
           D+NGQG  +GHL V+Y FVNC
Sbjct: 397 DTNGQGYQKGHLIVDYVFVNC 459


>BG452227 homologue to GP|7381203|gb| pathogenesis-related protein 4A {Pisum
           sativum}, partial (81%)
          Length = 677

 Score =  216 bits (549), Expect = 4e-57
 Identities = 96/120 (80%), Positives = 105/120 (87%)
 Frame = +3

Query: 31  QSANNVMATYNLYNPQQIGWNLLTAGAYCATWNANKPLAWRKKYGWTAFCGPAGAHGRDS 90
           QSANNV ATY+LYNPQ I WN  TA  YCATW+AN+PL+WR+KYGWTAFCGP G HGRDS
Sbjct: 3   QSANNVRATYHLYNPQNINWNYNTASVYCATWDANQPLSWRQKYGWTAFCGPQGPHGRDS 182

Query: 91  CGKCLRVRNTATGDEATVRIVDQCANGGLDLDVNVFRRLDSNGQGNHQGHLTVNYRFVNC 150
           CGKCLRV NTATG +ATVRIVDQCANGGLDLDVNVF ++D+NGQG  QGHLTVNY FVNC
Sbjct: 183 CGKCLRVTNTATGAQATVRIVDQCANGGLDLDVNVFNQIDTNGQGYQQGHLTVNYVFVNC 362


>TC86735 similar to GP|6562381|emb|CAB62537.1 pseudo-hevein {Hevea
           brasiliensis}, partial (83%)
          Length = 863

 Score =  184 bits (468), Expect = 9e-48
 Identities = 79/122 (64%), Positives = 98/122 (79%)
 Frame = +2

Query: 30  GQSANNVMATYNLYNPQQIGWNLLTAGAYCATWNANKPLAWRKKYGWTAFCGPAGAHGRD 89
           G+SA+NV ATY+ Y P Q GW+L    AYC+TW+A+KP +WR KYGWTAFCGP G  G+ 
Sbjct: 221 GESASNVRATYHYYQPDQHGWDLNAVSAYCSTWDASKPYSWRSKYGWTAFCGPVGPRGQA 400

Query: 90  SCGKCLRVRNTATGDEATVRIVDQCANGGLDLDVNVFRRLDSNGQGNHQGHLTVNYRFVN 149
           SCGKCLRV N+ TG + TVRIVDQC+NGGLDLDV VF R+D++G+G  QGHL V+Y+FV+
Sbjct: 401 SCGKCLRVTNSGTGAQETVRIVDQCSNGGLDLDVGVFNRIDTDGRGYQQGHLIVSYQFVD 580

Query: 150 CG 151
           CG
Sbjct: 581 CG 586


>TC85023 weakly similar to GP|7381205|gb|AAF61435.1| pre-hevein-like protein
           {Pisum sativum}, partial (42%)
          Length = 550

 Score =  144 bits (364), Expect = 1e-35
 Identities = 70/125 (56%), Positives = 86/125 (68%), Gaps = 2/125 (1%)
 Frame = +3

Query: 28  ANGQSANNVMATYNLYNPQQIGWNLLTAGAYCATWNANKPLAWRKKYGWTAFCGPAGAHG 87
           A+ QSANNV ATY  YNP +I WNL T+G +CA  + NK L+WR ++GW AFCG   A G
Sbjct: 129 ASAQSANNVKATYQSYNPHKIKWNLNTSGVFCAAQDGNKSLSWRSEFGWAAFCG--HAVG 302

Query: 88  RDSCGKCLRVRNTATG--DEATVRIVDQCANGGLDLDVNVFRRLDSNGQGNHQGHLTVNY 145
           +  CGKCL V N   G      VRIVD C NGGL LD++VF++LDS G GN QG+L V+Y
Sbjct: 303 KGVCGKCLNVTNKENGIIVSKIVRIVDTCTNGGLKLDIDVFQKLDSFGTGNAQGYLMVDY 482

Query: 146 RFVNC 150
            FV+C
Sbjct: 483 EFVDC 497


>BF648023 similar to GP|7381203|gb|A pathogenesis-related protein 4A {Pisum
           sativum}, partial (60%)
          Length = 482

 Score =  143 bits (361), Expect = 2e-35
 Identities = 61/88 (69%), Positives = 71/88 (80%)
 Frame = +2

Query: 10  TQRKLSIVAVWWLIAATFANGQSANNVMATYNLYNPQQIGWNLLTAGAYCATWNANKPLA 69
           TQR LS++ + +L+     NGQSANNV ATY+LYNPQ I WN  TA  YCATW+AN+PL+
Sbjct: 20  TQRTLSLLVLCFLVGTMLVNGQSANNVRATYHLYNPQNINWNYNTASVYCATWDANQPLS 199

Query: 70  WRKKYGWTAFCGPAGAHGRDSCGKCLRV 97
           WR+KYGWTAFCGP G HGRDSCGKCLRV
Sbjct: 200 WRQKYGWTAFCGPQGPHGRDSCGKCLRV 283


>TC90452 weakly similar to GP|19879970|gb|AAM00217.1 class 4
           pathogenesis-related protein {Prunus persica}, partial
           (79%)
          Length = 720

 Score =  125 bits (315), Expect = 5e-30
 Identities = 70/152 (46%), Positives = 95/152 (62%), Gaps = 15/152 (9%)
 Frame = +3

Query: 14  LSIVAVWWLIAATFANGQSANNVMATYNLYNP----QQIG--WNLLTAGAYCATWNANKP 67
           L +V ++ ++    A+ QS  NV ATY  +N     Q IG  WNL TAG  CA+ + NK 
Sbjct: 36  LDLVLIFCVLV--LASAQSEINVNATYRSFNSPTTKQGIGNKWNLNTAGVLCASQDGNKS 209

Query: 68  LAWRKKYGWTAFCGPAGAHGRDSCGKCLRVRNTATGDEA---------TVRIVDQCANGG 118
           L+WR KYGW AFCG   +  + +CGKCL V N  +G            TVRIVD C++GG
Sbjct: 210 LSWRSKYGWAAFCGIWLS--KYACGKCLNVTNRDSGSTVAQLRFPITQTVRIVDNCSHGG 383

Query: 119 LDLDVNVFRRLDSNGQGNHQGHLTVNYRFVNC 150
           L+LD++VF++LD++G G  QG+L V+Y FVNC
Sbjct: 384 LELDMDVFQKLDTSGYGMSQGYLVVDYEFVNC 479


>AJ504099 
          Length = 610

 Score = 36.2 bits (82), Expect = 0.005
 Identities = 21/64 (32%), Positives = 31/64 (47%)
 Frame = +1

Query: 87  GRDSCGKCLRVRNTATGDEATVRIVDQCANGGLDLDVNVFRRLDSNGQGNHQGHLTVNYR 146
           G D+C KCL + N     +  V+I+DQCA G     V++ R   S       G + +  R
Sbjct: 421 GLDNCYKCLEITNPKNKKKVVVKIIDQCA-GCKKNQVDLTRTAFSKIANPDDGIVHIKSR 597

Query: 147 FVNC 150
            V+C
Sbjct: 598 VVSC 609


>BQ141924 similar to PIR|F86387|F863 probable Pto kinase interactor
           [imported] - Arabidopsis thaliana, partial (6%)
          Length = 1314

 Score = 28.9 bits (63), Expect = 0.82
 Identities = 22/58 (37%), Positives = 24/58 (40%), Gaps = 6/58 (10%)
 Frame = +3

Query: 80  CGPAGAHG----RDSCGKCLRVRNTATGDEATVRIVDQCANGGLDL--DVNVFRRLDS 131
           CG  GAH     R   G C        G   TVR  D C  GG+ +   V  FR LDS
Sbjct: 387 CGAGGAHSSAGRRSGGGGCGGGEEVDRGRIRTVRATDGCTAGGVWVVDRVFAFRGLDS 560


>TC81918 similar to GP|21594031|gb|AAM65949.1 unknown {Arabidopsis
           thaliana}, partial (78%)
          Length = 1051

 Score = 28.9 bits (63), Expect = 0.82
 Identities = 9/17 (52%), Positives = 11/17 (63%)
 Frame = +3

Query: 80  CGPAGAHGRDSCGKCLR 96
           CGP GAHG   C  C++
Sbjct: 696 CGPEGAHG*SQCSSCIK 746


>TC93915 similar to GP|10178125|dbj|BAB11537. gene_id:MOP10.2~unknown
           protein {Arabidopsis thaliana}, partial (29%)
          Length = 1001

 Score = 28.9 bits (63), Expect = 0.82
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = -3

Query: 70  WRKKYGWTAFCGPAGAHGRDSCGKCL 95
           WR   GW  +CG  G  G DS G+C+
Sbjct: 327 WRAMEGWGVWCGKRG--GVDSVGECV 256


>TC83159 
          Length = 371

 Score = 26.6 bits (57), Expect = 4.1
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +1

Query: 47  QIGWNLLTAGAYCATWNANKPLAWRKK 73
           Q  W L     YC  WN  KPLA+++K
Sbjct: 277 QCAWVLTWLEIYC--WNIGKPLAYQQK 351


>TC89883 homologue to PIR|C86303|C86303 hypothetical protein AAG09080.1
           [imported] - Arabidopsis thaliana, partial (44%)
          Length = 1287

 Score = 26.6 bits (57), Expect = 4.1
 Identities = 8/24 (33%), Positives = 13/24 (53%)
 Frame = +3

Query: 49  GWNLLTAGAYCATWNANKPLAWRK 72
           GWNLL   +  + W  ++P  W +
Sbjct: 93  GWNLLVFQSLSSVWRLSQPTGWAR 164


>TC84760 similar to GP|8567777|gb|AAF76349.1| unknown protein {Arabidopsis
           thaliana}, partial (36%)
          Length = 781

 Score = 26.6 bits (57), Expect = 4.1
 Identities = 11/32 (34%), Positives = 14/32 (43%)
 Frame = +1

Query: 49  GWNLLTAGAYCATWNANKPLAWRKKYGWTAFC 80
           GW L   G  CA  + ++   W  K  WT  C
Sbjct: 634 GWTLSATGGVCAVXSVSQK*HWASK--WTTVC 723


>TC77117 similar to GP|9294182|dbj|BAB02084.1 protein kinases-like protein
          {Arabidopsis thaliana}, partial (34%)
          Length = 955

 Score = 26.6 bits (57), Expect = 4.1
 Identities = 10/16 (62%), Positives = 12/16 (74%)
 Frame = -2

Query: 19 VWWLIAATFANGQSAN 34
          VWW+IAA+F  GQ  N
Sbjct: 48 VWWVIAASFLVGQEFN 1


>TC85288 homologue to SP|Q43070|GAE1_PEA UDP-glucose 4-epimerase (EC
           5.1.3.2) (Galactowaldenase) (UDP- galactose
           4-epimerase). [Garden pea], partial (78%)
          Length = 1272

 Score = 25.8 bits (55), Expect = 6.9
 Identities = 10/23 (43%), Positives = 12/23 (51%)
 Frame = +1

Query: 58  YCATWNANKPLAWRKKYGWTAFC 80
           Y +T  A K L W+ KYG    C
Sbjct: 847 YASTDKAQKELGWKAKYGVEEMC 915


>TC79507 similar to GP|14194103|gb|AAK56246.1 AT3g22390/MCB17_12
           {Arabidopsis thaliana}, partial (11%)
          Length = 2117

 Score = 25.4 bits (54), Expect = 9.1
 Identities = 11/22 (50%), Positives = 16/22 (72%), Gaps = 2/22 (9%)
 Frame = +2

Query: 118 GLDLDVNVFR--RLDSNGQGNH 137
           G+DL + + +  R+DSNG GNH
Sbjct: 128 GIDLQLELEKTDRVDSNGNGNH 193


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.321    0.134    0.444 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,619,695
Number of Sequences: 36976
Number of extensions: 82937
Number of successful extensions: 325
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 320
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 321
length of query: 151
length of database: 9,014,727
effective HSP length: 88
effective length of query: 63
effective length of database: 5,760,839
effective search space: 362932857
effective search space used: 362932857
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 54 (25.4 bits)


Lotus: description of TM0280a.5