TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0266.9
         (111 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

BQ139521 similar to GP|22136812|gb unknown protein {Arabidopsis ...   156  5e-49
TC90970 similar to GP|17381247|gb|AAL36042.1 At1g08660/F22O13_14...    50  2e-07
TC80848 similar to GP|9758926|dbj|BAB09463.1 golgi SNARE protein...    30  0.18
BF648394                                                               27  1.6
TC84395 similar to GP|11385579|gb|AAG34872.1 In2-1 protein {Glyc...    26  2.7
TC92741 similar to GP|10281006|dbj|BAB13743. pseudo-response reg...    25  3.5
BF004258 similar to GP|4586596|dbj| fructose-bisphosphate aldola...    25  3.5
TC85308 homologue to SP|O65735|ALF_CICAR Fructose-bisphosphate a...    25  4.5
AW585816 homologue to SP|P46257|ALF2 Fructose-bisphosphate aldol...    25  4.5
TC77224 homologue to PIR|E84650|E84650 hypothetical protein At2g...    25  4.5
BG585879 similar to GP|21693573|gb extensin-like protein {Glycin...    25  4.5
TC84376                                                                25  5.9
TC79874 similar to GP|17065608|gb|AAL33784.1 unknown protein {Ar...    25  5.9
TC86799 similar to GP|22655368|gb|AAM98276.1 At2g17760/At2g17760...    25  5.9
TC77397 homologue to PIR|S37159|S37159 NADPH--ferrihemoprotein r...    25  5.9
TC77384 similar to PIR|D96749|D96749 unknown protein T10D10.2 [i...    25  5.9
CA921131 homologue to GP|21554263|gb putative uracil phosphoribo...    24  7.7
TC85344 similar to GP|22758323|gb|AAN05527.1 putative glutamine ...    24  7.7
AW586071 weakly similar to GP|11994727|db pyruvate kinase {Arabi...    24  7.7
TC77908 similar to GP|15810641|gb|AAL07245.1 unknown protein {Ar...    24  7.7

>BQ139521 similar to GP|22136812|gb unknown protein {Arabidopsis thaliana},
           partial (33%)
          Length = 681

 Score =  156 bits (395), Expect(2) = 5e-49
 Identities = 72/81 (88%), Positives = 78/81 (95%)
 Frame = +1

Query: 31  VYPTYHLTDEDTQALLSLHNTFQKCVSANGLGLKAAMSSDYCQTTINFPSDTIPKWKDPK 90
           VY +YHLTDE+ ++LLSLHN+FQKCVSANGLGLKAA SSDYCQTTI+FPSDTIPKWKDPK
Sbjct: 211 VYLSYHLTDEEAESLLSLHNSFQKCVSANGLGLKAASSSDYCQTTISFPSDTIPKWKDPK 390

Query: 91  TGELEALSFDFNLCEAVATWE 111
           TGELEALSFDFNLCEAVATWE
Sbjct: 391 TGELEALSFDFNLCEAVATWE 453



 Score = 52.4 bits (124), Expect(2) = 5e-49
 Identities = 26/31 (83%), Positives = 29/31 (92%)
 Frame = +3

Query: 1   MRVLQLGLLLALASGFAAISIYIIGLSDPSV 31
           MR+L+LGLLLALASGFAAI IYI GLS+PSV
Sbjct: 117 MRILRLGLLLALASGFAAICIYITGLSEPSV 209


>TC90970 similar to GP|17381247|gb|AAL36042.1 At1g08660/F22O13_14
           {Arabidopsis thaliana}, partial (40%)
          Length = 734

 Score = 49.7 bits (117), Expect = 2e-07
 Identities = 22/72 (30%), Positives = 39/72 (53%)
 Frame = +3

Query: 40  EDTQALLSLHNTFQKCVSANGLGLKAAMSSDYCQTTINFPSDTIPKWKDPKTGELEALSF 99
           E  + L    +T ++CV+  GLGL A +  D+C   + +P  T   W + +  + E L +
Sbjct: 174 ESIRDLFQFQSTVKQCVANRGLGLTADII-DHCTLVLKYPEGTNSTWYNQQFKKFEPLEY 350

Query: 100 DFNLCEAVATWE 111
            +++CEA+  WE
Sbjct: 351 TYDVCEAILLWE 386


>TC80848 similar to GP|9758926|dbj|BAB09463.1 golgi SNARE protein
           {Arabidopsis thaliana}, partial (24%)
          Length = 934

 Score = 29.6 bits (65), Expect = 0.18
 Identities = 15/35 (42%), Positives = 23/35 (64%)
 Frame = +1

Query: 28  DPSVYPTYHLTDEDTQALLSLHNTFQKCVSANGLG 62
           DPS      + D+DTQA+LS+ N+ ++  +AN LG
Sbjct: 457 DPS--HVLRIFDDDTQAMLSVRNSARELENANALG 555


>BF648394 
          Length = 650

 Score = 26.6 bits (57), Expect = 1.6
 Identities = 15/46 (32%), Positives = 25/46 (53%), Gaps = 5/46 (10%)
 Frame = +2

Query: 43  QALLSLHNTFQKCVSANGLGLKAAMSS-----DYCQTTINFPSDTI 83
           Q  L +HN F +CVS+  +  KA + +     +Y  T +N  S+T+
Sbjct: 377 QMSLYMHNVFLQCVSSKAMLSKAYLDT*PPIPEYKVTYLNLCSNTL 514


>TC84395 similar to GP|11385579|gb|AAG34872.1 In2-1 protein {Glycine max},
           partial (54%)
          Length = 692

 Score = 25.8 bits (55), Expect = 2.7
 Identities = 13/28 (46%), Positives = 16/28 (56%)
 Frame = +2

Query: 29  PSVYPTYHLTDEDTQALLSLHNTFQKCV 56
           PS+YP+ H   E  + LLS   TF K V
Sbjct: 587 PSLYPSGHDDKEFAEKLLSYTXTFYKTV 670


>TC92741 similar to GP|10281006|dbj|BAB13743. pseudo-response regulator 5
           {Arabidopsis thaliana}, partial (19%)
          Length = 645

 Score = 25.4 bits (54), Expect = 3.5
 Identities = 14/42 (33%), Positives = 21/42 (49%)
 Frame = -2

Query: 36  HLTDEDTQALLSLHNTFQKCVSANGLGLKAAMSSDYCQTTIN 77
           H  D D  A + LHN  +KC++  G  +      D+C+  IN
Sbjct: 482 HHYDRDAFANIMLHN*CEKCIAGYGWQI------DFCKY*IN 375


>BF004258 similar to GP|4586596|dbj| fructose-bisphosphate aldolase {Cicer
           arietinum}, partial (45%)
          Length = 229

 Score = 25.4 bits (54), Expect = 3.5
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -2

Query: 45  LLSLHNTFQKCVSANGLGLKAAM 67
           L+S  NTF +C    G+G K  M
Sbjct: 117 LISSENTFSRCADVGGIGDKLIM 49


>TC85308 homologue to SP|O65735|ALF_CICAR Fructose-bisphosphate aldolase
           cytoplasmic isozyme (EC 4.1.2.13). [Chickpea  Garbanzo],
           partial (98%)
          Length = 1507

 Score = 25.0 bits (53), Expect = 4.5
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -1

Query: 45  LLSLHNTFQKCVSANGLGLKAAM 67
           L+S  NTF +C    G+G K  M
Sbjct: 232 LISSKNTFSRCADVGGIGDKLIM 164


>AW585816 homologue to SP|P46257|ALF2 Fructose-bisphosphate aldolase
           cytoplasmic isozyme 2 (EC 4.1.2.13). [Garden pea] {Pisum
           sativum}, partial (54%)
          Length = 614

 Score = 25.0 bits (53), Expect = 4.5
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -2

Query: 45  LLSLHNTFQKCVSANGLGLKAAM 67
           L+S  NTF +C    G+G K  M
Sbjct: 112 LISSKNTFSRCADVGGIGDKLIM 44


>TC77224 homologue to PIR|E84650|E84650 hypothetical protein At2g25610
           [imported] - Arabidopsis thaliana, partial (97%)
          Length = 1275

 Score = 25.0 bits (53), Expect = 4.5
 Identities = 12/38 (31%), Positives = 19/38 (49%)
 Frame = -2

Query: 42  TQALLSLHNTFQKCVSANGLGLKAAMSSDYCQTTINFP 79
           TQA++SL     K +S+    +  +  +  C T I FP
Sbjct: 791 TQAIMSLFTFLPKGISSREDSITRSTQNIVCYTAIEFP 678


>BG585879 similar to GP|21693573|gb extensin-like protein {Glycine max},
           partial (64%)
          Length = 830

 Score = 25.0 bits (53), Expect = 4.5
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -1

Query: 45  LLSLHNTFQKCVSANGLGLKAAM 67
           L+S  NTF +C    G+G K  M
Sbjct: 818 LISSKNTFSRCADVGGIGDKLIM 750


>TC84376 
          Length = 672

 Score = 24.6 bits (52), Expect = 5.9
 Identities = 20/67 (29%), Positives = 29/67 (42%)
 Frame = -1

Query: 38  TDEDTQALLSLHNTFQKCVSANGLGLKAAMSSDYCQTTINFPSDTIPKWKDPKTGELEAL 97
           T  +T ++L  H+ F   +  N   L    S+D         S++  K K P     E L
Sbjct: 249 TKFNTNSILLTHDIF---ILLNSHYLYIISSADVNADAREVMSES--KLKSPPNERGETL 85

Query: 98  SFDFNLC 104
           +FDF LC
Sbjct: 84  NFDFGLC 64


>TC79874 similar to GP|17065608|gb|AAL33784.1 unknown protein {Arabidopsis
           thaliana}, partial (88%)
          Length = 1154

 Score = 24.6 bits (52), Expect = 5.9
 Identities = 18/63 (28%), Positives = 24/63 (37%)
 Frame = +3

Query: 35  YHLTDEDTQALLSLHNTFQKCVSANGLGLKAAMSSDYCQTTINFPSDTIPKWKDPKTGEL 94
           ++ T    Q LL +  T      A       A  SD   + + +PSD      DP TG L
Sbjct: 237 FNRTPSKAQPLLDIGATLATSPHA------VASQSDVVFSIVGYPSDVRSVLLDPNTGAL 398

Query: 95  EAL 97
             L
Sbjct: 399 AGL 407


>TC86799 similar to GP|22655368|gb|AAM98276.1 At2g17760/At2g17760
           {Arabidopsis thaliana}, partial (48%)
          Length = 1850

 Score = 24.6 bits (52), Expect = 5.9
 Identities = 17/55 (30%), Positives = 25/55 (44%), Gaps = 3/55 (5%)
 Frame = +1

Query: 11  ALASGFAAISIYIIGLSD---PSVYPTYHLTDEDTQALLSLHNTFQKCVSANGLG 62
           A   G A   ++ +G+SD   PS+     LT           N+F  C +A+GLG
Sbjct: 778 AFLDGAAPNGLFGLGMSDVSVPSILAKQGLTS----------NSFSMCFAADGLG 912


>TC77397 homologue to PIR|S37159|S37159 NADPH--ferrihemoprotein reductase
           (EC 1.6.2.4) - spring vetch, complete
          Length = 2519

 Score = 24.6 bits (52), Expect = 5.9
 Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
 Frame = +2

Query: 17  AAISIYIIGLSDPSVYPTY--HLTDEDTQALLSLHN 50
           AAIS Y +   DP+V P+Y  H    +  A+  +H+
Sbjct: 848 AAISEYRVVFHDPTVTPSYENHFNAANGGAVFDIHH 955


>TC77384 similar to PIR|D96749|D96749 unknown protein T10D10.2 [imported] -
            Arabidopsis thaliana, partial (56%)
          Length = 1199

 Score = 24.6 bits (52), Expect = 5.9
 Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 5/62 (8%)
 Frame = -2

Query: 32   YPTYHLTDEDTQALLSLHN-----TFQKCVSANGLGLKAAMSSDYCQTTINFPSDTIPKW 86
            + TY +++ DT + + L N       Q+     G+ L        C+  I+FP+DTI   
Sbjct: 1033 FKTYSMSNTDTCSYIQLFNFSNNYQCQRVSDVFGMCL--------CKCFIDFPTDTIKNQ 878

Query: 87   KD 88
            K+
Sbjct: 877  KE 872


>CA921131 homologue to GP|21554263|gb putative uracil phosphoribosyl
           transferase {Arabidopsis thaliana}, partial (30%)
          Length = 654

 Score = 24.3 bits (51), Expect = 7.7
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = +1

Query: 71  YCQTTINFPSDTIPKWKDPKT 91
           YC+ T    S ++PK++ P +
Sbjct: 196 YCEATTTCSSSSVPKYRSPNS 258


>TC85344 similar to GP|22758323|gb|AAN05527.1 putative glutamine synthetase
           {Oryza sativa (japonica cultivar-group)}, partial (42%)
          Length = 1111

 Score = 24.3 bits (51), Expect = 7.7
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +2

Query: 51  TFQKCVSANGLGLKAAMSSDYCQTTIN 77
           TF++  S+NGLG+K +     CQ  ++
Sbjct: 614 TFEEQWSSNGLGIKFSKGKH*CQNILS 694


>AW586071 weakly similar to GP|11994727|db pyruvate kinase {Arabidopsis
           thaliana}, partial (19%)
          Length = 598

 Score = 24.3 bits (51), Expect = 7.7
 Identities = 13/25 (52%), Positives = 14/25 (56%)
 Frame = -2

Query: 75  TINFPSDTIPKWKDPKTGELEALSF 99
           TIN PS+TI K K P    L  L F
Sbjct: 255 TINSPSETISKPKFPSNATLLLLFF 181


>TC77908 similar to GP|15810641|gb|AAL07245.1 unknown protein {Arabidopsis
           thaliana}, partial (37%)
          Length = 960

 Score = 24.3 bits (51), Expect = 7.7
 Identities = 16/50 (32%), Positives = 22/50 (44%)
 Frame = +2

Query: 50  NTFQKCVSANGLGLKAAMSSDYCQTTINFPSDTIPKWKDPKTGELEALSF 99
           N  ++CV A        +SS  C    NFPS + P W   +   L+  SF
Sbjct: 563 NIVKRCVDA--------VSSKVCNEA-NFPSRSPPNWWTEELAVLDVESF 685


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.319    0.134    0.403 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,884,153
Number of Sequences: 36976
Number of extensions: 50870
Number of successful extensions: 190
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 188
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 189
length of query: 111
length of database: 9,014,727
effective HSP length: 87
effective length of query: 24
effective length of database: 5,797,815
effective search space: 139147560
effective search space used: 139147560
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 50 (23.9 bits)