BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0260.10
(751 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC81795 similar to PIR|T45891|T45891 ABC transporter-like protei... 508 e-144
TC84278 similar to PIR|T02567|T02567 probable ATP-binding casset... 443 e-124
BE997422 similar to GP|9758023|dbj ABC transporter-like protein ... 372 e-103
TC93168 similar to PIR|T02567|T02567 probable ATP-binding casset... 231 6e-61
TC86205 similar to PIR|A86289|A86289 probable ABC transporter [i... 198 6e-51
TC80149 similar to GP|22137204|gb|AAM91447.1 At2g01320/F10A8.20 ... 173 2e-43
TC83735 similar to PIR|A84509|A84509 probable ABC transporter [i... 162 6e-40
TC81334 weakly similar to GP|19423992|gb|AAL87274.1 putative ABC... 99 2e-39
TC91754 similar to GP|20260310|gb|AAM13053.1 unknown protein {Ar... 136 3e-32
TC81415 weakly similar to PIR|A84509|A84509 probable ABC transpo... 135 4e-32
AW560126 similar to GP|15292753|gb putative ABC transporter prot... 115 5e-26
TC82289 similar to GP|12382007|dbj|BAB21276. putative ABC transp... 112 4e-25
BE205528 similar to GP|12382006|d putative ABC transporter prote... 102 7e-22
BQ139036 similar to GP|14423315|g ATP-binding cassette transport... 96 4e-20
TC92726 similar to PIR|T04229|T04229 ABC-type transport protein ... 96 7e-20
AW685718 homologue to GP|20522008|d pleiotropic drug resistance ... 93 3e-19
AJ499813 similar to GP|9279716|db ABC transporter {Arabidopsis t... 88 1e-17
TC93805 weakly similar to GP|11994269|dbj|BAB01452. ABC transpor... 87 2e-17
TC86206 similar to GP|20522008|dbj|BAB92011. pleiotropic drug re... 83 4e-16
TC90299 similar to PIR|E96742|E96742 probable ABC transporter F1... 82 8e-16
>TC81795 similar to PIR|T45891|T45891 ABC transporter-like protein -
Arabidopsis thaliana, partial (42%)
Length = 1184
Score = 508 bits (1307), Expect = e-144
Identities = 245/319 (76%), Positives = 281/319 (87%), Gaps = 1/319 (0%)
Frame = +3
Query: 433 SSMVPTFANPFWIEMVTLSKRSFTDSRRKPELFGIRLGAVMVTGFILATMFWNLDNSPKG 492
+S V TFANPFWIEM + KRS +SRR PELFGIRLGAV+VTG ILAT+F+ LD+SPKG
Sbjct: 39 ASSVATFANPFWIEMAVMGKRSLLNSRRMPELFGIRLGAVLVTGGILATIFYRLDDSPKG 218
Query: 493 VQERLGFFAFAMSTTFYTTADALPVFLQERYIFMRETAYNAYRRSSYLISHALVSLPPLA 552
VQERLGFFAFAMSTTFYT A+A+PVFLQERYIFMRETAYNAYRRSSY+++H+++SLP L
Sbjct: 219 VQERLGFFAFAMSTTFYTCAEAIPVFLQERYIFMRETAYNAYRRSSYVLAHSIISLPALI 398
Query: 553 FLSLAFAVITFWAVGLDGGASGFLFYFLIIFASFWAGNSFVTFLSGVVPHVMLGYTIVVA 612
FLS AF+V TFW+VGL GG SGFLFYF I ASFWAG+SFVTFLSGVV HVMLG+T+VVA
Sbjct: 399 FLSFAFSVTTFWSVGLAGGTSGFLFYFFTILASFWAGSSFVTFLSGVVSHVMLGFTVVVA 578
Query: 613 ILAYFLLLSGFFIDRDRIPSYWIWFHYLSLVKYPYEAVLQNEFD-DPVKCFVRGVQIFDN 671
ILAYFLL SGFFI RDRIP YWIWFHYLSLVKYP+E VLQNEFD P +CFV+G+Q+FDN
Sbjct: 579 ILAYFLLFSGFFISRDRIPPYWIWFHYLSLVKYPFEGVLQNEFDIKPPRCFVKGIQMFDN 758
Query: 672 SPLRSVPYELKLKLLGSMSGTLGTNITATTCLTTGADILQQNGVTELSKWNCLWITVAWG 731
+PL VP LK++LL S+S TLGTNIT++TC+ TGADIL+Q GVT+LSKWNCL+IT+A G
Sbjct: 759 TPLGDVPGSLKVELLKSLSSTLGTNITSSTCVVTGADILKQQGVTQLSKWNCLFITIALG 938
Query: 732 FFFRFLFYLALLVGSKNKR 750
FFFRFLFYLALL GSKNKR
Sbjct: 939 FFFRFLFYLALLFGSKNKR 995
>TC84278 similar to PIR|T02567|T02567 probable ATP-binding cassette protein
T16B24.1 - Arabidopsis thaliana, partial (28%)
Length = 835
Score = 443 bits (1139), Expect = e-124
Identities = 233/275 (84%), Positives = 252/275 (90%), Gaps = 9/275 (3%)
Frame = +3
Query: 199 MLTVEETLTFAAEFRLPRTLSKSKKKARVQALIDQLGLRNAAKTVIGDEGHRGVSGGERR 258
MLTVEETLTFAAEFRLPR+LSKSKK ARVQALIDQLGLRNAAKTVIGDEGHRGVSGGERR
Sbjct: 12 MLTVEETLTFAAEFRLPRSLSKSKKNARVQALIDQLGLRNAAKTVIGDEGHRGVSGGERR 191
Query: 259 RVSIGIDIIHDPILLFLDEPTSGLDSTSAFMVVKVLQRIAQSGSIVIMSIHQPSYRILGL 318
RVSIGIDIIHDPI+LFLDEPTSGLDSTSAFMVVKVLQRIAQSGSIVIMSIHQPSYRILGL
Sbjct: 192 RVSIGIDIIHDPIVLFLDEPTSGLDSTSAFMVVKVLQRIAQSGSIVIMSIHQPSYRILGL 371
Query: 319 LDRMIFLSRGQTVYSGSPTQLPSFFAEFGHPLPDSDNRTEFALDLIRDLEGSPGGTKSLV 378
LDRMIFLSRGQTVYSGSP+QLPS+FAEFGHP+P+ DNRTEFALDLIR+LEGSPGGTKSLV
Sbjct: 372 LDRMIFLSRGQTVYSGSPSQLPSYFAEFGHPIPEGDNRTEFALDLIRELEGSPGGTKSLV 551
Query: 379 EFNKSWQSMTKVHSHSVSSQPERPNGMSLKEAISASISRGKLVSGAT-----NTATTTP- 432
EFNKSWQSMTK+H+++ SQ P+ +SLKEAISASISR KLVSGAT N T+P
Sbjct: 552 EFNKSWQSMTKLHNNNDISQNATPS-LSLKEAISASISRRKLVSGATAATNSNAIATSPS 728
Query: 433 ---SSMVPTFANPFWIEMVTLSKRSFTDSRRKPEL 464
SS+VPT+ANPFWIE++TLSKRS T+SRR PEL
Sbjct: 729 SSSSSIVPTYANPFWIELLTLSKRSITNSRRMPEL 833
>BE997422 similar to GP|9758023|dbj ABC transporter-like protein {Arabidopsis
thaliana}, partial (27%)
Length = 790
Score = 372 bits (955), Expect = e-103
Identities = 179/214 (83%), Positives = 193/214 (89%)
Frame = +1
Query: 538 SYLISHALVSLPPLAFLSLAFAVITFWAVGLDGGASGFLFYFLIIFASFWAGNSFVTFLS 597
SY+ISHA+V+LP L FLSLAFA ITFWAVGLDGG SGFLFYF+II ASFWAGNSFV+FLS
Sbjct: 1 SYVISHAIVALPALLFLSLAFACITFWAVGLDGGFSGFLFYFVIILASFWAGNSFVSFLS 180
Query: 598 GVVPHVMLGYTIVVAILAYFLLLSGFFIDRDRIPSYWIWFHYLSLVKYPYEAVLQNEFDD 657
GVVPHVMLGYTIVVAILAYFLL SGFFI+RDRIP YWIWFHY+SLVKYPYEAVLQNEF D
Sbjct: 181 GVVPHVMLGYTIVVAILAYFLLFSGFFINRDRIPGYWIWFHYMSLVKYPYEAVLQNEFSD 360
Query: 658 PVKCFVRGVQIFDNSPLRSVPYELKLKLLGSMSGTLGTNITATTCLTTGADILQQNGVTE 717
KCFVRGVQIFDNSPL SV LKLKLL SMS TLG ITA+TCLTTG D+L+QN VT+
Sbjct: 361 AAKCFVRGVQIFDNSPLASVSDALKLKLLDSMSDTLGMKITASTCLTTGTDLLKQNAVTD 540
Query: 718 LSKWNCLWITVAWGFFFRFLFYLALLVGSKNKRS 751
LSKWNCLW+TVAWGFFFR LFYL+LL+GSKNKRS
Sbjct: 541 LSKWNCLWVTVAWGFFFRILFYLSLLLGSKNKRS 642
>TC93168 similar to PIR|T02567|T02567 probable ATP-binding cassette protein
T16B24.1 - Arabidopsis thaliana, partial (13%)
Length = 647
Score = 231 bits (590), Expect = 6e-61
Identities = 120/168 (71%), Positives = 139/168 (82%)
Frame = +2
Query: 1 MSSRIVAENVTDDATSYLDLMELSDLTRRPASGDLPTLGQLLKHVGDARKEAAGDGSETP 60
MS+RIVAE+V D SY D ME+ D TRR +GD+PTLGQLLKHVGD RKEA GDGSETP
Sbjct: 128 MSARIVAEDVPD---SYFDFMEMDDFTRRRDAGDMPTLGQLLKHVGDVRKEAIGDGSETP 298
Query: 61 LHHALDVVGMEPRSLPFVLSFSNLTYSVKVKRKLSFSSIFPRRRNRLGAVEDAPAVEESV 120
+HH LD+ GME RSLPFVLSF+NLTYSVK++ K+SF+ +F RR R V + PA+ E+
Sbjct: 299 VHHTLDINGMEVRSLPFVLSFNNLTYSVKIRNKMSFTDLFSRR--RASPVAETPALGETA 472
Query: 121 FSRTKTLLNDISGEARDGEIMAVLGASGSGKSTLIDALANRIAKGRLK 168
FSR+K LLN+ISGEARDGEIMA LGASGSGKSTLIDALANRIAKG+LK
Sbjct: 473 FSRSKILLNEISGEARDGEIMAFLGASGSGKSTLIDALANRIAKGKLK 616
>TC86205 similar to PIR|A86289|A86289 probable ABC transporter [imported] -
Arabidopsis thaliana, partial (52%)
Length = 2721
Score = 198 bits (504), Expect = 6e-51
Identities = 147/558 (26%), Positives = 254/558 (45%), Gaps = 12/558 (2%)
Frame = +1
Query: 112 DAPAV--EESVFSRTKTLLNDISGEARDGEIMAVLGASGSGKSTLIDALANRIAKGRLKG 169
D PA E+ V LL +SG R G + A++G SG+GK+TL+D LA R G + G
Sbjct: 709 DMPAEMKEQGVTEDRLVLLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIDG 888
Query: 170 TLALNGEALESRLLKVISAYVMQDDLLFPMLTVEETLTFAAEFRLPRTLSKSKKKARVQA 229
+ ++G + IS Y Q+D+ P +TV E+L ++A RLP + + +K +
Sbjct: 889 DIKVSGYPKKQETFARISGYCEQNDIHSPHVTVYESLLYSAWLRLPSGVDSNTRKMFIDE 1068
Query: 230 LIDQLGLRNAAKTVIGDEGHRGVSGGERRRVSIGIDIIHDPILLFLDEPTSGLDSTSAFM 289
++D + L + +++G G G+S +R+R++I ++++ +P ++F+DEPTSGLD+ +A +
Sbjct: 1069 VMDLVELNSLRNSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAI 1248
Query: 290 VVKVLQRIAQSGSIVIMSIHQPSYRILGLLDRMIFLSR-GQTVYSGSPTQLPSFFAEFGH 348
V++ ++ +G V+ +IHQPS I D + + R GQ +Y G
Sbjct: 1249 VMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG-------------- 1386
Query: 349 PLPDSDNRTEFALDLIRDLEGSPGGTKSLVEFN-KSWQSMTKVHSHSVSSQPERPNGMSL 407
PL + LI+ E G +K +N +W M +V ++ E G+
Sbjct: 1387 PL------GRHSTHLIKYFESIDGVSKIKDGYNPATW--MLEV----TTTAQELNLGVDF 1530
Query: 408 KEAISAS--ISRGK-LVSGATNTATTTPSSMVPT-FANPFWIEMVTLSKRSFTDSRRKPE 463
+ S R K L+ + A + PT F+ F ++ + R P
Sbjct: 1531 TDLYKNSDLYRRNKQLIQELSVPAPGSKDLHFPTQFSQSFLVQCQACLWKQRWSYWRNPP 1710
Query: 464 LFGIRLGAVMVTGFILATMFWNLDNSPKGVQERLGFFAFAMSTTFY----TTADALPVFL 519
+R G + TMFW+L Q+ L + + ++ PV
Sbjct: 1711 YTAVRFFFTTFIGLMFGTMFWDLGGKHSSRQDLLNAVGSMYTAVLFLGVQNSSSVQPVVA 1890
Query: 520 QERYIFMRETAYNAYRRSSYLISHALVSLPPLAFLSLAFAVITFWAVGLDGGASGFLFYF 579
ER +F RE A Y Y S LV LP + ++ + I + +G D A FL+Y
Sbjct: 1891 VERTVFYREKAAGMYSALPYAFSQILVELPYVFAQAVTYGAIVYAMIGFDWTAEKFLWYL 2070
Query: 580 LIIFASFWAGNSFVTFLSGVVPHVMLGYTIVVAILAYFLLLSGFFIDRDRIPSYWIWFHY 639
++ + + V P+ + + A A + L SGF + R IP +W W+++
Sbjct: 2071 FFMYFTLLYFTFYGMMAVAVTPNHHVASIVAAAFYAIWNLFSGFVVPRPSIPIWWRWYYW 2250
Query: 640 LSLVKYPYEAVLQNEFDD 657
V + ++ ++F D
Sbjct: 2251 ACPVAWTIYGLVASQFGD 2304
Score = 49.7 bits (117), Expect = 4e-06
Identities = 25/107 (23%), Positives = 53/107 (49%), Gaps = 1/107 (0%)
Frame = +1
Query: 550 PLAFLSLAFAV-ITFWAVGLDGGASGFLFYFLIIFASFWAGNSFVTFLSGVVPHVMLGYT 608
P++ + ++ V +T++ +G D F+++F + ++ + ++++ T
Sbjct: 22 PVSLMEVSLWVFLTYYVIGFDPNVGRMFKQFVVLFFMSQMASGLFRAIASLGRNMIVANT 201
Query: 609 IVVAILAYFLLLSGFFIDRDRIPSYWIWFHYLSLVKYPYEAVLQNEF 655
L FL L GF + R I +WIW +++S + Y A++ NEF
Sbjct: 202 FGSFALLTFLSLGGFILSRKDIKGWWIWGYWISPLMYGQNALMANEF 342
>TC80149 similar to GP|22137204|gb|AAM91447.1 At2g01320/F10A8.20
{Arabidopsis thaliana}, partial (44%)
Length = 1366
Score = 173 bits (438), Expect = 2e-43
Identities = 96/242 (39%), Positives = 146/242 (59%), Gaps = 4/242 (1%)
Frame = +3
Query: 127 LLNDISGEARDGEIMAVLGASGSGKSTLIDALANRIAKG---RLKGTLALNGEALESRLL 183
LL ++SGEA+ G ++A++G SGSGK+TL++ LA +++ L G L NG+
Sbjct: 402 LLKNLSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLSASPRLHLSGLLEFNGKPSSRNAY 581
Query: 184 KVISAYVMQDDLLFPMLTVEETLTFAAEFRLPRTLSKSKKKARVQALIDQLGLRNAAKTV 243
K AYV Q+DL F LTV ETL+ A E +L S ++ V L+ + GL + A T
Sbjct: 582 KF--AYVRQEDLFFSQLTVRETLSLAIELQLHNISSAEERDEYVNNLLFKTGLVSCADTN 755
Query: 244 IGDEGHRGVSGGERRRVSIGIDIIHDPILLFLDEPTSGLDSTSAFMVVKVLQRIAQSGSI 303
+GD RG+SGGE++R+S+ +++ P ++F DEPT+GLD+ A V++ L+++A G
Sbjct: 756 VGDAKVRGISGGEKKRLSLACELLASPSVIFADEPTTGLDAFQAEKVMETLRQLALDGHT 935
Query: 304 VIMSIHQPSYRILGLLDRMIFLSRGQTVYSGSPTQLP-SFFAEFGHPLPDSDNRTEFALD 362
VI SIHQP + D ++ L+ G VY+G P ++F++FG+ PD N EF D
Sbjct: 936 VICSIHQPRGSVYSKFDDIVLLTDGSLVYAGPAGDEPLTYFSKFGYHCPDHVNPAEFLAD 1115
Query: 363 LI 364
LI
Sbjct: 1116LI 1121
>TC83735 similar to PIR|A84509|A84509 probable ABC transporter [imported] -
Arabidopsis thaliana, partial (34%)
Length = 872
Score = 162 bits (409), Expect = 6e-40
Identities = 90/249 (36%), Positives = 135/249 (54%), Gaps = 1/249 (0%)
Frame = +1
Query: 495 ERLGFFAFAMSTTFYTTADALPVFLQERYIFMRETAYNAYRRSSYLISHALVSLPPLAFL 554
ER+G FAF ++ + +ALP+FLQER I M+ET+ +YR SSY I++ LV LP L L
Sbjct: 7 ERVGLFAFILTFLLSSAIEALPIFLQEREILMKETSSGSYRVSSYAIANGLVYLPFLLIL 186
Query: 555 SLAFAVITFWAVGLDGGASGFLFYFLIIFASFWAGNSFVTFLSGVVPHVMLGYTIVVAIL 614
++ FAV +W +GL+ + FL + L+I+ + NS V S +VP+ ++G +I+ ++
Sbjct: 187 AILFAVPLYWIIGLNQNFTAFLHFLLLIWLVLYTANSVVVCFSALVPNFIVGNSIIAGVI 366
Query: 615 AYFLLLSGFFIDRDRIPSYWIWFHYLSLVKYPYEAVLQNEFDDPVKCFVRGVQIFDNSPL 674
L SG+FI IP+YWI+ HYLSL KYP+E L NEF + KC
Sbjct: 367 GSSFLFSGYFISNHEIPNYWIFMHYLSLFKYPFEGFLINEFSNSKKC------------- 507
Query: 675 RSVPYELKLKLLGSMSGTLGTNITATTCLTTGADILQQNGVT-ELSKWNCLWITVAWGFF 733
L M G C+ G D+L++ G E S+W + + V + F
Sbjct: 508 -----------LEYMFGA---------CVMKGEDVLKEEGYGGESSRWKNVGVMVCFIFV 627
Query: 734 FRFLFYLAL 742
+RF+ Y+ L
Sbjct: 628 YRFISYVIL 654
>TC81334 weakly similar to GP|19423992|gb|AAL87274.1 putative ABC
transporter protein {Arabidopsis thaliana}, partial
(29%)
Length = 977
Score = 98.6 bits (244), Expect(2) = 2e-39
Identities = 55/140 (39%), Positives = 88/140 (62%), Gaps = 2/140 (1%)
Frame = +2
Query: 122 SRTKTLLNDISGEARDGEIMAVLGASGSGKSTLIDALANRIAKG-RLKGTLALNGEALES 180
+ +K++L ++G A+ +++A++G SG GKSTL+DALA R+ R G + +NG +
Sbjct: 119 NESKSILQGLTGYAKPAQLLAIMGPSGCGKSTLLDALAGRLGSNTRQSGDILINGN--KQ 292
Query: 181 RLLKVISAYVMQDDLLFPMLTVEETLTFAAEFRLPRTLSKSKKKARVQALIDQLGLRNAA 240
L SAYV QDD L LTV+E + ++A+ +LP T+S +KK R I ++GL++A
Sbjct: 293 ALAYGTSAYVTQDDTLLTTLTVKEAVYYSAQLQLPDTMSNEEKKERADFTIREMGLQDAI 472
Query: 241 KTVIGDEG-HRGVSGGERRR 259
T G +G+SGG++RR
Sbjct: 473 NTRNRKGGVLKGISGGQKRR 532
Score = 83.2 bits (204), Expect(2) = 2e-39
Identities = 49/117 (41%), Positives = 66/117 (55%), Gaps = 3/117 (2%)
Frame = +3
Query: 251 GVSGGERRRVSIGIDIIHDPILLFLDEPTSGLDSTSAFMVVKVLQRIAQSGSI---VIMS 307
GV GE VSI I+I+ P LLFLDEPTSGLDS +++ V+K + + + I ++ S
Sbjct: 516 GVKKGE---VSISIEILTRPRLLFLDEPTSGLDSAASYYVMKRIASLDKKDGIQRTIVAS 686
Query: 308 IHQPSYRILGLLDRMIFLSRGQTVYSGSPTQLPSFFAEFGHPLPDSDNRTEFALDLI 364
IHQPS + L + LS G+TVY G + FFA G P P N ++ L I
Sbjct: 687 IHQPSTEVFQLFHNLCLLSSGKTVYFGPASAASEFFASNGFPCPPLQNPSDHLLKTI 857
>TC91754 similar to GP|20260310|gb|AAM13053.1 unknown protein {Arabidopsis
thaliana}, partial (25%)
Length = 663
Score = 136 bits (343), Expect = 3e-32
Identities = 78/159 (49%), Positives = 105/159 (65%), Gaps = 1/159 (0%)
Frame = +2
Query: 124 TKTLLNDISGEARDGEIMAVLGASGSGKSTLIDALANRIAKGR-LKGTLALNGEALESRL 182
TK LLN ++G A G IMA++G SGSGKSTL+D LA R+AK + G + LNG+
Sbjct: 191 TKRLLNGLNGFAEPGRIMAIMGPSGSGKSTLLDTLAGRLAKNVVMTGNVFLNGKKKTPGY 370
Query: 183 LKVISAYVMQDDLLFPMLTVEETLTFAAEFRLPRTLSKSKKKARVQALIDQLGLRNAAKT 242
V AYV Q+D+L LTV+ET+T++A RLP T+SK + V A I ++GL + A
Sbjct: 371 GFV--AYVTQEDVLLGTLTVKETITYSAHLRLPSTMSKEEINGLVDATIIEMGLHDCADR 544
Query: 243 VIGDEGHRGVSGGERRRVSIGIDIIHDPILLFLDEPTSG 281
+IG+ G+SGGER+R SI ++I+ P LFLDEPTSG
Sbjct: 545 LIGNWHLXGISGGERKRTSIALEILTRPRXLFLDEPTSG 661
>TC81415 weakly similar to PIR|A84509|A84509 probable ABC transporter
[imported] - Arabidopsis thaliana, partial (13%)
Length = 702
Score = 135 bits (341), Expect = 4e-32
Identities = 86/226 (38%), Positives = 133/226 (58%), Gaps = 2/226 (0%)
Frame = +2
Query: 57 SETPLHHALDVVGMEPRSLPFVLSFSNLTYSVKVKRKLSFSSIFPRRRNRLGAVEDAPAV 116
S + HH+ P + LS +NLTY++ + + FS ++ P
Sbjct: 98 SSSSFHHS-------PPPTSYKLSINNLTYTLHPYKTIPFS---------FKSLTQKP-- 223
Query: 117 EESVFSRTKTLLNDISGEARDGEIMAVLGASGSGKSTLIDALANRIA-KGRLKGTLALNG 175
+L +S AR EI+AV+G SG+GKSTL+ +A RI K T+++N
Sbjct: 224 ------HPVNILKSVSFVARTSEIVAVVGPSGTGKSTLLRIIAGRIKDKDFNPKTISIND 385
Query: 176 EALES-RLLKVISAYVMQDDLLFPMLTVEETLTFAAEFRLPRTLSKSKKKARVQALIDQL 234
+ + L+ I +V Q+D L P+LTV+ETL F A+FRL + ++ +++ RV+ L+ +L
Sbjct: 386 HPMSTPSQLRKICGFVSQEDNLLPLLTVKETLLFGAKFRL-KEMTPKERELRVENLMQEL 562
Query: 235 GLRNAAKTVIGDEGHRGVSGGERRRVSIGIDIIHDPILLFLDEPTS 280
GL + A + +GD+ +RGVSGGER+RVSIG+D+IH+P +L LDEPTS
Sbjct: 563 GLFHVAHSFVGDDENRGVSGGERKRVSIGVDMIHNPPILVLDEPTS 700
>AW560126 similar to GP|15292753|gb putative ABC transporter protein
{Arabidopsis thaliana}, partial (17%)
Length = 727
Score = 115 bits (289), Expect = 5e-26
Identities = 69/193 (35%), Positives = 111/193 (56%), Gaps = 4/193 (2%)
Frame = +3
Query: 57 SETPLHHA----LDVVGMEPRSLPFVLSFSNLTYSVKVKRKLSFSSIFPRRRNRLGAVED 112
+ TP H+ D+ + S P L F ++ Y +K++ K + + L E
Sbjct: 165 THTPPKHSSRESCDLPTLLSSSYPITLKFMDVGYRIKIENKSAKGGCIKKLFTPL---ES 335
Query: 113 APAVEESVFSRTKTLLNDISGEARDGEIMAVLGASGSGKSTLIDALANRIAKGRLKGTLA 172
+P+ + S ++ + +LN+++G A GEI+A+LG SGSGKSTL+++LA R+ L GT+
Sbjct: 336 SPSDQRS--TQERIILNNVTGIAYPGEILAILGPSGSGKSTLLNSLAGRLHTHNLTGTIL 509
Query: 173 LNGEALESRLLKVISAYVMQDDLLFPMLTVEETLTFAAEFRLPRTLSKSKKKARVQALID 232
N L+ +L+ + +V QDD+L+P LTV ETL F + RLPR L++ K A ++ I
Sbjct: 510 ANSSKLDRTILR-RTGFVTQDDILYPHLTVRETLVFCSMLRLPRQLTRETKVAAAESAIA 686
Query: 233 QLGLRNAAKTVIG 245
+LGL T+IG
Sbjct: 687 ELGLTKCENTIIG 725
>TC82289 similar to GP|12382007|dbj|BAB21276. putative ABC transporter
protein {Oryza sativa (japonica cultivar-group)},
partial (25%)
Length = 1108
Score = 112 bits (281), Expect = 4e-25
Identities = 101/409 (24%), Positives = 177/409 (42%), Gaps = 10/409 (2%)
Frame = +3
Query: 169 GTLALNGEALESRLLKVISAYVMQDDLLFPMLTVEETLTFAAEFRLPRTLSKSKKKARVQ 228
G + ++G + IS Y Q+D +P + E F E V
Sbjct: 9 GNITISGFPKKQETFARISGYCEQNDRHWPDINAETRKMFVEE---------------VM 143
Query: 229 ALIDQLGLRNAAKTVIGDEGHRGVSGGERRRVSIGIDIIHDPILLFLDEPTSGLDSTSAF 288
L++ L+NA ++G G G+S +R+R++I ++++ +P ++F+DEPTSGLD+ +A
Sbjct: 144 ELVELKPLQNA---LVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAA 314
Query: 289 MVVKVLQRIAQSGSIVIMSIHQPSYRILGLLDRMIFLSR-GQTVYSGSPTQLPSFFAEFG 347
+V++ ++ +G V+ +IHQPS I D ++ L + GQ +Y G G
Sbjct: 315 IVMRTVRNTVNTGRTVVCTIHQPSIDIFESFDELLLLKQGGQEIYVG----------PLG 464
Query: 348 HPLPDSDNRTEFALDLIRDLEGSPGGTKSLVEFN-KSWQSMTKVHSHSVSSQPERPNGMS 406
H +S N LI EG G +K +N +W M +V +S ER G+
Sbjct: 465 H---NSSN-------LINYFEGIHGVSKIKDGYNPATW--MLEV----TTSSKERELGID 596
Query: 407 LKEAISASISRGKLVSGATNTATTTPSS----MVPTFANPFWIEMVTLSKRSFTDSRRKP 462
E S + + +T P S ++ FW + + + R P
Sbjct: 597 FAEVYQNSELYRRNKALIKELSTPAPCSKDLYFASQYSRSFWTQCMACLWKQHWSYWRNP 776
Query: 463 ELFGIRLGAVMVTGFILATMFWNLDNSPKGVQE---RLGFFAFAMSTTFYTTADAL-PVF 518
E IR + +MFW+L + + Q+ +G A+ A+++ PV
Sbjct: 777 EYNAIRFLYSTAVAVLFGSMFWDLGSKIEKEQDLFNAMGSMYSAVIVIGIKNANSVQPVV 956
Query: 519 LQERYIFMRETAYNAYRRSSYLISHALVSLPPLAFLSLAFAVITFWAVG 567
ER +F RE A Y Y + ++ LP + ++ + +I + +G
Sbjct: 957 AVERTVFYRERAAGMYSAFPYAFAQVVIELPYVXVQAVVYGIIVYAMIG 1103
>BE205528 similar to GP|12382006|d putative ABC transporter protein {Oryza
sativa (japonica cultivar-group)}, partial (14%)
Length = 617
Score = 102 bits (253), Expect = 7e-22
Identities = 51/167 (30%), Positives = 99/167 (58%), Gaps = 1/167 (0%)
Frame = +1
Query: 169 GTLALNGEALESRLLKVISAYVMQDDLLFPMLTVEETLTFAAEFRLPRTLSKSKKKARVQ 228
G + ++G + IS Y Q+D+ P +TV E+L ++A RL ++ +K V+
Sbjct: 10 GNITISGFPKKQETFARISGYCEQNDIHSPYVTVYESLLYSAWLRLSPDINAETRKMFVE 189
Query: 229 ALIDQLGLRNAAKTVIGDEGHRGVSGGERRRVSIGIDIIHDPILLFLDEPTSGLDSTSAF 288
+++ + L+ ++G G G+S +R+R++I ++++ +P ++F+DEPTSGLD+ +A
Sbjct: 190 EVMELVELKPLQNALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAA 369
Query: 289 MVVKVLQRIAQSGSIVIMSIHQPSYRILGLLDRMIFLSR-GQTVYSG 334
+V++ ++ +G V+ +IHQPS I D ++ L + GQ +Y G
Sbjct: 370 IVMRTVRNTVNTGRTVVCTIHQPSIDIFESFDELLLLKQGGQEIYVG 510
>BQ139036 similar to GP|14423315|g ATP-binding cassette transporter Atr5
{Mycosphaerella graminicola}, partial (14%)
Length = 673
Score = 96.3 bits (238), Expect = 4e-20
Identities = 56/146 (38%), Positives = 90/146 (61%), Gaps = 6/146 (4%)
Frame = +1
Query: 225 ARVQALIDQLGLRNAAKTVIGDEGHRGVSGGERRRVSIGIDIIHDP-ILLFLDEPTSGLD 283
A V +I+ L L + T+IG G G+S +R+RV+IG++++ P IL+FLDEPTSGLD
Sbjct: 4 AYVDTIIELLELYDLEHTLIGRVG-AGLSVEQRKRVTIGVELVSKPSILIFLDEPTSGLD 180
Query: 284 STSAFMVVKVLQRIAQSGSIVIMSIHQPSYRILGLLDRMIFLSR-GQTVYSG----SPTQ 338
+AF V+ L+++A G V+++IHQPS ++ D ++ L++ G+TVY G +
Sbjct: 181 GQAAFNTVRFLRKLADVGQAVLVTIHQPSAQLFAQFDTLLLLAKGGKTVYFGEIGDNGDT 360
Query: 339 LPSFFAEFGHPLPDSDNRTEFALDLI 364
+ +F G P P N EF +D++
Sbjct: 361 VKEYFDRNGVPCPRDVNPAEFMIDVV 438
>TC92726 similar to PIR|T04229|T04229 ABC-type transport protein F14M19.30 -
Arabidopsis thaliana, partial (20%)
Length = 585
Score = 95.5 bits (236), Expect = 7e-20
Identities = 59/142 (41%), Positives = 89/142 (62%), Gaps = 1/142 (0%)
Frame = +1
Query: 127 LLNDISGEARDGEIMAVLGASGSGKSTLIDALANRIAKGRLKGTLALNGEALES-RLLKV 185
+L D+S A EI+A++G SG+GKSTL+D L+ R + L GTL+LN + + +
Sbjct: 187 ILKDVSLTAYPSEILAIVGPSGAGKSTLLDILSAR--RLPLSGTLSLNSSPITNPSTFRK 360
Query: 186 ISAYVMQDDLLFPMLTVEETLTFAAEFRLPRTLSKSKKKARVQALIDQLGLRNAAKTVIG 245
+SAYV Q D PMLTV ET F+A P+T+ + A V +L+++L L + A T +
Sbjct: 361 LSAYVPQHDACLPMLTVSETFAFSASLLKPKTIDIA---AIVSSLLNELRLTHLANTRL- 528
Query: 246 DEGHRGVSGGERRRVSIGIDII 267
+ G+SGGER+RVSIG+ ++
Sbjct: 529 ---NHGLSGGERKRVSIGLSLL 585
>AW685718 homologue to GP|20522008|d pleiotropic drug resistance like protein
{Nicotiana tabacum}, partial (12%)
Length = 613
Score = 93.2 bits (230), Expect = 3e-19
Identities = 43/138 (31%), Positives = 86/138 (62%), Gaps = 1/138 (0%)
Frame = +2
Query: 198 PMLTVEETLTFAAEFRLPRTLSKSKKKARVQALIDQLGLRNAAKTVIGDEGHRGVSGGER 257
P +TV E+L ++A RLP + + +K ++ +++ + L +++G G G+S +R
Sbjct: 8 PHVTVYESLVYSAWLRLPADVDSNTRKMFIEEVMELVELNPLRNSLVGLPGVNGLSTEQR 187
Query: 258 RRVSIGIDIIHDPILLFLDEPTSGLDSTSAFMVVKVLQRIAQSGSIVIMSIHQPSYRILG 317
+R++I ++++ +P ++F+DEPTSGLD+ +A +V++ ++ +G V+ +IHQPS I
Sbjct: 188 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFE 367
Query: 318 LLDRMIFLSR-GQTVYSG 334
D + + R G+ +Y G
Sbjct: 368 AFDELFLMKRGGEEIYVG 421
>AJ499813 similar to GP|9279716|db ABC transporter {Arabidopsis thaliana},
partial (13%)
Length = 573
Score = 87.8 bits (216), Expect = 1e-17
Identities = 41/122 (33%), Positives = 77/122 (62%), Gaps = 1/122 (0%)
Frame = -3
Query: 214 LPRTLSKSKKKARVQALIDQLGLRNAAKTVIGDEGHRGVSGGERRRVSIGIDIIHDPILL 273
LP+ + +K V+ ++D + L++ ++G G G+S +R+R++I ++++ +P ++
Sbjct: 571 LPKEVGNEEKMQFVEQVMDLVELQSLKDAIVGLPGVTGLSTEQRKRLTIAVELVANPSII 392
Query: 274 FLDEPTSGLDSTSAFMVVKVLQRIAQSGSIVIMSIHQPSYRILGLLDRMIFLSR-GQTVY 332
F+DEPTSGLD+ +A +V++ ++ +G V+ +IHQPS I D +I + R GQ VY
Sbjct: 391 FMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELILMKRGGQLVY 212
Query: 333 SG 334
G
Sbjct: 211 GG 206
>TC93805 weakly similar to GP|11994269|dbj|BAB01452. ABC transporter-like
protein {Arabidopsis thaliana}, partial (15%)
Length = 649
Score = 87.0 bits (214), Expect = 2e-17
Identities = 47/113 (41%), Positives = 71/113 (62%), Gaps = 1/113 (0%)
Frame = +2
Query: 124 TKTLLNDISGEARDGEIMAVLGASGSGKSTLIDALANRIAKG-RLKGTLALNGEALESRL 182
+K++L ++G A+ G+++A++G SG GKSTL+D LA R++ R G + +NG E L
Sbjct: 257 SKSILQGLTGYAKPGQLLAIMGPSGCGKSTLLDTLAGRLSSNTRQTGEILINGHKQE--L 430
Query: 183 LKVISAYVMQDDLLFPMLTVEETLTFAAEFRLPRTLSKSKKKARVQALIDQLG 235
SAYV QDD L LTV E + ++A+ +LP T+SK +KK R I + G
Sbjct: 431 SYGTSAYVTQDDTLLTTLTVREAVFYSAQLQLPNTMSKEEKKERADITIKENG 589
>TC86206 similar to GP|20522008|dbj|BAB92011. pleiotropic drug resistance
like protein {Nicotiana tabacum}, partial (11%)
Length = 757
Score = 82.8 bits (203), Expect = 4e-16
Identities = 64/246 (26%), Positives = 110/246 (44%)
Frame = +3
Query: 8 ENVTDDATSYLDLMELSDLTRRPASGDLPTLGQLLKHVGDARKEAAGDGSETPLHHALDV 67
+N DD+++Y+ E+ +LP R E++G G +
Sbjct: 105 DNSEDDSSNYMTAQEV----------ELP------------RIESSGRGDSVTVSSHGKK 218
Query: 68 VGMEPRSLPFVLSFSNLTYSVKVKRKLSFSSIFPRRRNRLGAVEDAPAVEESVFSRTKTL 127
GM P ++F ++ YSV + P G ED L
Sbjct: 219 KGMVLPFEPHSITFDDIVYSVDM----------PAEMKEQGVTEDR-----------LVL 335
Query: 128 LNDISGEARDGEIMAVLGASGSGKSTLIDALANRIAKGRLKGTLALNGEALESRLLKVIS 187
L +SG R G + A++G SG+GK+TL+D LA R G + G + ++G + IS
Sbjct: 336 LKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIDGDIKVSGYPKKQETFARIS 515
Query: 188 AYVMQDDLLFPMLTVEETLTFAAEFRLPRTLSKSKKKARVQALIDQLGLRNAAKTVIGDE 247
Y Q+D+ P +TV E+L ++A RLP + + +K ++ ++D + L + +++G
Sbjct: 516 GYCEQNDIHSPHVTVYESLLYSAWLRLPSGVDSNTRKMFIEEVMDLVELNSLRDSLVGLP 695
Query: 248 GHRGVS 253
G G+S
Sbjct: 696 GVSGLS 713
>TC90299 similar to PIR|E96742|E96742 probable ABC transporter F17M19.11
[imported] - Arabidopsis thaliana, partial (46%)
Length = 1054
Score = 82.0 bits (201), Expect = 8e-16
Identities = 78/337 (23%), Positives = 139/337 (41%), Gaps = 2/337 (0%)
Frame = +2
Query: 326 SRGQTVYSGSPTQLPSFFAEFGHPLPDSDNRTEFALDLIRDLEGSPGGTKSLVEFNKSWQ 385
S G +Y G + +F G N +F LDL + G + E ++
Sbjct: 2 SEGNCMYYGKGAEAMRYFESVGFAPSFPVNPADFMLDLANGVCHVDG----VGEKDRPNI 169
Query: 386 SMTKVHSHSVSSQPERPNGMSLKEAISASISRGKLVSGATNTATTTPSSMVPTFANPFWI 445
++S++ P+ + + +AS S +++ + V F ++
Sbjct: 170 KQNLINSYNTVLGPKVKS--LCMDTTNASTKDNHHPSRTSSSKERRYNDRVNIF--DWFY 337
Query: 446 EMVTLSKRSFTDSRRKPELFG-IRLGAVMVTGFILATMFWNLDNSPKGVQERLGFFAF-A 503
+ L +RS + RK E F +R+ V+ + M+W+ D K VQ+RLG F +
Sbjct: 338 QFSILLQRSLKE--RKYESFNTLRVFQVVAAALLAGLMWWHSDY--KNVQDRLGLLFFIS 505
Query: 504 MSTTFYTTADALPVFLQERYIFMRETAYNAYRRSSYLISHALVSLPPLAFLSLAFAVITF 563
+ + + +++ F QER IF++E A Y SSY ++ + LP L F VIT+
Sbjct: 506 IFWGVFPSFNSVFAFPQERAIFVKERASGMYTLSSYFMARIVGDLPMELLLPTIFLVITY 685
Query: 564 WAVGLDGGASGFLFYFLIIFASFWAGNSFVTFLSGVVPHVMLGYTIVVAILAYFLLLSGF 623
W GL FL L++ L + T+ + F+L G+
Sbjct: 686 WMGGLKPDLLSFLLTLLVVLGFVLVSQGLGLALGAAIMDAKQASTVAAVTMLAFVLTGGY 865
Query: 624 FIDRDRIPSYWIWFHYLSLVKYPYEAVLQNEFDDPVK 660
++ ++PS W Y+S Y Y + + ++ D K
Sbjct: 866 YV--HKVPSCVAWIKYISTTFYSYRLLTRIQYGDGKK 970
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.322 0.137 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,422,770
Number of Sequences: 36976
Number of extensions: 275854
Number of successful extensions: 2021
Number of sequences better than 10.0: 131
Number of HSP's better than 10.0 without gapping: 1952
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1983
length of query: 751
length of database: 9,014,727
effective HSP length: 103
effective length of query: 648
effective length of database: 5,206,199
effective search space: 3373616952
effective search space used: 3373616952
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)
Lotus: description of TM0260.10