TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0243.9
         (310 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

CB895055 similar to GP|8778232|gb| F10B6.19 {Arabidopsis thalian...    33  0.11
BQ141734 homologue to PIR|T49109|T491 glycine-rich protein - Ara...    32  0.41
TC84938 weakly similar to GP|9758920|dbj|BAB09457.1 gb|AAD25781....    30  1.2
BF519281 weakly similar to GP|23498957|emb hypothetical protein ...    30  1.5
TC82828 similar to GP|15293289|gb|AAK93755.1 unknown protein {Ar...    29  2.0
BQ141736 similar to PIR|T06291|T062 extensin homolog T9E8.80 - A...    29  2.0
TC81670 weakly similar to PIR|E86293|E86293 hypothetical protein...    29  2.0
BF650433 similar to GP|13992685|gb| Hypothetical protein {Oryza ...    29  2.0
TC82549 similar to GP|15292785|gb|AAK92761.1 putative ribosomal-...    29  2.6
TC82879 similar to GP|975305|gb|AAA75173.1|| SCA 13.1 {synthetic...    29  2.6
BG447553 similar to GP|15292785|gb| putative ribosomal-protein S...    29  2.6
TC82475 similar to GP|20146289|dbj|BAB89071. peptide deformylase...    29  2.6
TC78701 similar to GP|21554835|gb|AAM63703.1 unknown {Arabidopsi...    28  3.4
AL367045                                                               28  3.4
TC91201 similar to PIR|T06371|T06371 probable UDP-glucuronosyltr...    28  3.4
BF636859 similar to PIR|T30872|T308 dNDP-glucose synthase - Stre...    28  3.4
TC86740 weakly similar to PIR|D84747|D84747 probable cinnamoyl-C...    28  4.5
TC77261 homologue to GP|8777330|dbj|BAA96920.1 26S proteasome AA...    28  4.5
BE997470 similar to PIR|D84747|D84 probable cinnamoyl-CoA reduct...    28  4.5
TC89427 weakly similar to GP|4557063|gb|AAD22502.1| expressed pr...    28  5.9

>CB895055 similar to GP|8778232|gb| F10B6.19 {Arabidopsis thaliana}, partial
           (3%)
          Length = 680

 Score = 33.5 bits (75), Expect = 0.11
 Identities = 18/45 (40%), Positives = 32/45 (71%)
 Frame = +2

Query: 179 SFFSLPLSPPLTSTISSSTGTISSSSTTKKKTSRGVGRSEELQIW 223
           SFF L +S  L+S+ SSS+ + SSSS +K K +  +G+S+ ++++
Sbjct: 59  SFFFLKIS--LSSSSSSSSSSSSSSSESKNKLALNMGKSKTIELY 187


>BQ141734 homologue to PIR|T49109|T491 glycine-rich protein - Arabidopsis
           thaliana, partial (4%)
          Length = 1181

 Score = 31.6 bits (70), Expect = 0.41
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = +1

Query: 130 DVMVLEGERRRGGGRIPPARRPGCFI 155
           DV+  EG    GGG + PARR G F+
Sbjct: 421 DVLTTEGREGVGGGNVEPARRVGSFV 498


>TC84938 weakly similar to GP|9758920|dbj|BAB09457.1
           gb|AAD25781.1~gene_id:MXI22.10~strong similarity to
           unknown protein {Arabidopsis thaliana}, partial (28%)
          Length = 728

 Score = 30.0 bits (66), Expect = 1.2
 Identities = 19/46 (41%), Positives = 28/46 (60%)
 Frame = -1

Query: 159 GVLEGAFQTLHSGYFRLFPFSFFSLPLSPPLTSTISSSTGTISSSS 204
           G+LE +F+   S    + PF+    PLS P  S I++S+ TISS+S
Sbjct: 305 GLLEVSFRIQLSNSANV-PFTASPSPLSTPFASVITNSSVTISSNS 171


>BF519281 weakly similar to GP|23498957|emb hypothetical protein  conserved
           {Plasmodium falciparum 3D7}, partial (6%)
          Length = 666

 Score = 29.6 bits (65), Expect = 1.5
 Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
 Frame = -2

Query: 164 AFQTLHSGYFRLFPFS---FFSLPLSPPLTSTISSSTGTISSSSTTKKKTS 211
           A + + +G    FPFS   F S  + P L + ISSS+ + SSSS++ +  S
Sbjct: 182 ASEVVENGDLPGFPFS*SVFGSCSMDPKLDAAISSSSSSSSSSSSSTRDFS 30


>TC82828 similar to GP|15293289|gb|AAK93755.1 unknown protein {Arabidopsis
           thaliana}, partial (62%)
          Length = 719

 Score = 29.3 bits (64), Expect = 2.0
 Identities = 17/66 (25%), Positives = 30/66 (44%), Gaps = 1/66 (1%)
 Frame = -3

Query: 246 NGEEQWWRNLGVSGSVSGSLLHLLHRLCFSLS-ESGAWLRKEGCDGDGFESRLELFVVFV 304
           N  + W +   V   +  +   LLH++C++L   S  +L   GC+    + RL + + F 
Sbjct: 378 NQNQIW*KTYKVEFHIQHNCKPLLHKICYTLQYPSIQFLSGGGCETARVKERLSILLHFS 199

Query: 305 AWTNFL 310
            W   L
Sbjct: 198 QWMMLL 181


>BQ141736 similar to PIR|T06291|T062 extensin homolog T9E8.80 - Arabidopsis
           thaliana, partial (4%)
          Length = 1099

 Score = 29.3 bits (64), Expect = 2.0
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = -3

Query: 170 SGYFRLFPFSFFSLPLSPPLTSTIS 194
           S +  LF FSFF LP  PPL+   S
Sbjct: 686 SSFVGLFSFSFFVLPFPPPLSPRFS 612


>TC81670 weakly similar to PIR|E86293|E86293 hypothetical protein AAF18488.1
           [imported] - Arabidopsis thaliana, partial (41%)
          Length = 1797

 Score = 29.3 bits (64), Expect = 2.0
 Identities = 19/65 (29%), Positives = 26/65 (39%), Gaps = 1/65 (1%)
 Frame = -2

Query: 1   MGVGGGVWDSVTGRGWRAAQRKVVSGVWWVGF-GTVKEYYQKLDGTKIWVVLMLLERLKF 59
           M V G    S  G GW  A  K   G+W   F  +V +Y+ +       +  +  E L  
Sbjct: 452 MPVHGQT*FSTCGTGWLTASAKAGGGIWSASFTRSVSKYFARARWFAFCLAFLFAEPLLT 273

Query: 60  IVALC 64
            VA C
Sbjct: 272 PVACC 258


>BF650433 similar to GP|13992685|gb| Hypothetical protein {Oryza sativa}
           [Oryza sativa (japonica cultivar-group)], partial (8%)
          Length = 558

 Score = 29.3 bits (64), Expect = 2.0
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = +3

Query: 180 FFSLPLSPPLTSTISSSTGTISSSSTTKKKTSRGV 214
           FF LPLSPP T++ S ++ + S    +  ++S G+
Sbjct: 360 FFLLPLSPPTTASSSITSNSSSEKIPSSTRSSFGI 464


>TC82549 similar to GP|15292785|gb|AAK92761.1 putative ribosomal-protein S6
           kinase ATPK19 {Arabidopsis thaliana}, partial (40%)
          Length = 705

 Score = 28.9 bits (63), Expect = 2.6
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = +1

Query: 185 LSPPLTSTISSSTGTISSSSTTKKKTSR 212
           L PP T+T+SSS+     ++T KKKT +
Sbjct: 64  LHPPTTTTLSSSSTNSLPTATKKKKTKK 147


>TC82879 similar to GP|975305|gb|AAA75173.1|| SCA 13.1 {synthetic
           construct}, partial (86%)
          Length = 820

 Score = 28.9 bits (63), Expect = 2.6
 Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = +1

Query: 247 GEEQWWRNLGVS-GSVSGSLLHLLHRLCFSLSESGAWLR 284
           GEE W    G+S G + G  +HL HRL ++L  +G W R
Sbjct: 115 GEEAW----GLSEGLLQGFWIHL-HRLLYALGATGPWTR 216


>BG447553 similar to GP|15292785|gb| putative ribosomal-protein S6 kinase
           ATPK19 {Arabidopsis thaliana}, partial (16%)
          Length = 665

 Score = 28.9 bits (63), Expect = 2.6
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = +1

Query: 185 LSPPLTSTISSSTGTISSSSTTKKKTSR 212
           L PP T+T+SSS+     ++T KKKT +
Sbjct: 193 LHPPTTTTLSSSSTNSLPTATKKKKTKK 276


>TC82475 similar to GP|20146289|dbj|BAB89071. peptide deformylase-like
           protein {Oryza sativa (japonica cultivar-group)},
           partial (52%)
          Length = 654

 Score = 28.9 bits (63), Expect = 2.6
 Identities = 23/74 (31%), Positives = 37/74 (49%)
 Frame = +3

Query: 177 PFSFFSLPLSPPLTSTISSSTGTISSSSTTKKKTSRGVGRSEELQIWCESKGRVPDLVRQ 236
           PFS       PPLT T+SSS+   S ++T + +     GR+++ +   + K  +PD V+ 
Sbjct: 117 PFSLSPFSKPPPLTLTLSSSS---SQNATIRTRAGFFFGRTKDDK--KKKKMDLPDTVK- 278

Query: 237 WLYGSDPALNGEEQ 250
                DP L+   Q
Sbjct: 279 ---AGDPVLHEPAQ 311


>TC78701 similar to GP|21554835|gb|AAM63703.1 unknown {Arabidopsis
           thaliana}, partial (44%)
          Length = 1480

 Score = 28.5 bits (62), Expect = 3.4
 Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 6/62 (9%)
 Frame = -2

Query: 169 HSGYFRLFPFSFFSLPLSPPLTSTISSSTGTISSSSTTKKKTS------RGVGRSEELQI 222
           + G F LFP       LSPP T     S+ + S+SS  ++  S       G      L+I
Sbjct: 186 YHGTFLLFPTFSTLSSLSPPSTIPYFFSSHSFSTSSENRETVSAAAVVCSGALAKSVLKI 7

Query: 223 WC 224
           WC
Sbjct: 6   WC 1


>AL367045 
          Length = 427

 Score = 28.5 bits (62), Expect = 3.4
 Identities = 14/51 (27%), Positives = 22/51 (42%)
 Frame = +1

Query: 232 DLVRQWLYGSDPALNGEEQWWRNLGVSGSVSGSLLHLLHRLCFSLSESGAW 282
           D  ++W Y    +    E WW  + + G  SGS L+L+   C  +     W
Sbjct: 175 DWYKRWSYIVMTSKEPTELWWTAVSLVGRQSGSGLYLISFPCVYIKNCEFW 327


>TC91201 similar to PIR|T06371|T06371 probable UDP-glucuronosyltransferase
           (EC 2.4.1.-) - garden pea, partial (63%)
          Length = 822

 Score = 28.5 bits (62), Expect = 3.4
 Identities = 16/45 (35%), Positives = 23/45 (50%)
 Frame = -3

Query: 163 GAFQTLHSGYFRLFPFSFFSLPLSPPLTSTISSSTGTISSSSTTK 207
           G    L + +F    FSF SLP SP + S    S  ++ +SS +K
Sbjct: 616 GPEAALCANFFHCKAFSFISLPFSPSINSFTRISILSLLASSISK 482


>BF636859 similar to PIR|T30872|T308 dNDP-glucose synthase - Streptomyces
           viridochromogenes, partial (4%)
          Length = 375

 Score = 28.5 bits (62), Expect = 3.4
 Identities = 18/45 (40%), Positives = 25/45 (55%)
 Frame = -1

Query: 185 LSPPLTSTISSSTGTISSSSTTKKKTSRGVGRSEELQIWCESKGR 229
           +S P T+TI S     S  STT ++T R    S+ L   CE++GR
Sbjct: 243 VSLPSTTTIRSLRLLSSKRSTT*ERTGRLATGSKALGSSCETRGR 109


>TC86740 weakly similar to PIR|D84747|D84747 probable cinnamoyl-CoA
           reductase [imported] - Arabidopsis thaliana, partial
           (85%)
          Length = 1198

 Score = 28.1 bits (61), Expect = 4.5
 Identities = 16/29 (55%), Positives = 18/29 (61%)
 Frame = -3

Query: 181 FSLPLSPPLTSTISSSTGTISSSSTTKKK 209
           F L L+PPL S ISSS+ TI  S   K K
Sbjct: 89  FLLLLTPPLASIISSSSLTIK*SQCNKHK 3


>TC77261 homologue to GP|8777330|dbj|BAA96920.1 26S proteasome AAA-ATPase
           subunit RPT3 {Arabidopsis thaliana}, partial (94%)
          Length = 1575

 Score = 28.1 bits (61), Expect = 4.5
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = +3

Query: 183 LPLSPPLTSTISSSTGTISSSSTTKKKT 210
           +P  PP TST SS+    +S+S+T KK+
Sbjct: 177 IPPPPPTTSTPSSNPSNANSNSSTYKKS 260


>BE997470 similar to PIR|D84747|D84 probable cinnamoyl-CoA reductase
           [imported] - Arabidopsis thaliana, partial (44%)
          Length = 807

 Score = 28.1 bits (61), Expect = 4.5
 Identities = 16/29 (55%), Positives = 18/29 (61%)
 Frame = -3

Query: 181 FSLPLSPPLTSTISSSTGTISSSSTTKKK 209
           F L L+PPL S ISSS+ TI  S   K K
Sbjct: 91  FLLLLTPPLASIISSSSLTIK*SQCNKHK 5


>TC89427 weakly similar to GP|4557063|gb|AAD22502.1| expressed protein
           {Arabidopsis thaliana}, partial (50%)
          Length = 753

 Score = 27.7 bits (60), Expect = 5.9
 Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
 Frame = -2

Query: 186 SPPLTSTISSSTGTISSSSTTKKKTSRGVGRSEELQIWCE----SKGRVPDL 233
           SP  +S++SSS+   SSSS++   +S  +      Q+W      S+G +P +
Sbjct: 386 SPEKSSSLSSSSSFTSSSSSSSSSSSVSLPSLFSSQVWFPLDN*SRGNLPSI 231


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.323    0.139    0.450 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,377,698
Number of Sequences: 36976
Number of extensions: 214315
Number of successful extensions: 1763
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 1630
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1730
length of query: 310
length of database: 9,014,727
effective HSP length: 96
effective length of query: 214
effective length of database: 5,465,031
effective search space: 1169516634
effective search space used: 1169516634
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 58 (26.9 bits)