TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0237.14
         (1754 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

AW689741 similar to GP|9759369|dbj gene_id:MYJ24.10~ref|NP_05517...   317  2e-86
TC84623 similar to GP|9759369|dbj|BAB09828.1 gene_id:MYJ24.10~re...    82  2e-15
TC81530 similar to GP|10177440|dbj|BAB10736. gb|AAC55944.1~gene_...    33  0.97
TC86202 similar to GP|3738234|dbj|BAA33796.1 sulfite reductase {...    32  2.8
TC78495 homologue to PIR|S53504|S53504 extensin-like protein S3 ...    31  4.8

>AW689741 similar to GP|9759369|dbj gene_id:MYJ24.10~ref|NP_055178.1~similar to
            unknown protein {Arabidopsis thaliana}, partial (1%)
          Length = 651

 Score =  317 bits (813), Expect = 2e-86
 Identities = 154/203 (75%), Positives = 174/203 (84%), Gaps = 3/203 (1%)
 Frame = +2

Query: 1257 SQGGPSSEWIKIFWKSFRGSQEELSLFSDWPLIPAFLGRPVLCRVRERHLVFIPPPLVQR 1316
            SQGGPSSEW++IFWK+F+GSQEELSLFSDWPLIPAFLGRPVLCRVRERHLVFIPPPL   
Sbjct: 11   SQGGPSSEWVRIFWKNFKGSQEELSLFSDWPLIPAFLGRPVLCRVRERHLVFIPPPLEHP 190

Query: 1317 TLQSGILDRESTENHVGGVSVSRDDTS---VAEAYTSAFDRLKISYPWLLSLLNQCNVPI 1373
            T  S IL+ ESTE++  GV +S D++S   +AE+Y+SAF+RLKISYPWLL +LNQCN+PI
Sbjct: 191  TSTSQILETESTESYADGVRISSDNSSEAELAESYSSAFERLKISYPWLLPMLNQCNIPI 370

Query: 1374 FDEAFIDCATSSNCFSMPGGSLGQVIASKLVAAKQAGYFTEPNNLSASSCDALFSLFCDE 1433
            FDEAFIDCA SSNCFS P  SLGQVIASKLVA KQAGYFTEP + S S+CDALFSLF  E
Sbjct: 371  FDEAFIDCAASSNCFSTPERSLGQVIASKLVAVKQAGYFTEPTDFSTSNCDALFSLFSGE 550

Query: 1434 LFSNGFHYAQEEIEILRSLPIYK 1456
             +SN   YAQEEIE+LRSLPIYK
Sbjct: 551  FYSNSVRYAQEEIEVLRSLPIYK 619


>TC84623 similar to GP|9759369|dbj|BAB09828.1
           gene_id:MYJ24.10~ref|NP_055178.1~similar to unknown
           protein {Arabidopsis thaliana}, partial (3%)
          Length = 634

 Score = 81.6 bits (200), Expect = 2e-15
 Identities = 52/155 (33%), Positives = 79/155 (50%), Gaps = 3/155 (1%)
 Frame = +3

Query: 449 KVSELLALYGNSEFLLFDLLELADCCKAKKLHLIYDKREHPRQSLLQHNLGEFQGPALVA 508
           ++ E+L  Y     +L +L++ AD   A  + L  D+R H R+SLL  +L ++QGPAL+A
Sbjct: 168 RIREVLLNYPEGTTVLKELIQNADDAGATTVSLCLDRRSHGRESLLSDSLSQWQGPALLA 347

Query: 509 IFEGACLSREEFSNFQLLPPWKLRG---NTLNYGLGLVGCYSICDLLSVVSGGYFYMFDP 565
            +  A  S E+F +   +      G    T  +G+G    Y + DL S VSG Y  +FDP
Sbjct: 348 -YNDAVFSEEDFVSISKIGGSSKHGQASKTGRFGVGFNSVYHLTDLPSFVSGKYLVLFDP 524

Query: 566 RGLVLSAPSSNAPSGKMFSLIGTDLAQRFGDQFSP 600
           +G+ L   S+  P GK      +     + DQF P
Sbjct: 525 QGVYLPRVSAXNP-GKRIDFTSSSALSFYXDQFFP 626


>TC81530 similar to GP|10177440|dbj|BAB10736.
           gb|AAC55944.1~gene_id:K9H21.2~similar to unknown protein
           {Arabidopsis thaliana}, partial (24%)
          Length = 1135

 Score = 33.1 bits (74), Expect = 0.97
 Identities = 17/42 (40%), Positives = 24/42 (56%)
 Frame = -1

Query: 911 PSSSTAVLKADWECLKERVIHPFYSRIVDLPVWQLYSGNLVK 952
           PS+S+ VL A     +  V HPF    ++L VW   +G+LVK
Sbjct: 475 PSASSQVLLAQS*AFQGHVFHPFQGLSLELSVWCQQTGSLVK 350


>TC86202 similar to GP|3738234|dbj|BAA33796.1 sulfite reductase {Nicotiana
           tabacum}, partial (91%)
          Length = 2454

 Score = 31.6 bits (70), Expect = 2.8
 Identities = 17/58 (29%), Positives = 25/58 (42%)
 Frame = +2

Query: 209 DCPNIGVLSRQLIELSKSYQQLKTHSLLDPDFDVKLQKEIPCLYSKLQEYINTDDFND 266
           D PN+   + QLI+   SYQQ          +   ++ + PC     Q Y+  DD  D
Sbjct: 386 DAPNLSEAATQLIKFHGSYQQYNRDERGSRTYSFMIRTKNPCGKVSNQLYLTMDDLAD 559


>TC78495 homologue to PIR|S53504|S53504 extensin-like protein S3 - alfalfa,
           partial (97%)
          Length = 1049

 Score = 30.8 bits (68), Expect = 4.8
 Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
 Frame = -2

Query: 623 SDCLKVGHDVASNRIK-HITDVFMEHGSRTLLFLKSVLQVSISTWEEGHSHPCQNFSISI 681
           ++CLK  ++V SN++  HI  + +  G    L  +   +VSI   ++  +HP  N +I  
Sbjct: 961 NECLKNANNVCSNKLPYHIEKIIIYRGKNNNLSSEEKTEVSI*NSKDRKAHPNTNPTILC 782

Query: 682 DPSSS 686
           D + S
Sbjct: 781 DHNFS 767


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.320    0.138    0.419 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,258,511
Number of Sequences: 36976
Number of extensions: 910919
Number of successful extensions: 4151
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4078
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4148
length of query: 1754
length of database: 9,014,727
effective HSP length: 110
effective length of query: 1644
effective length of database: 4,947,367
effective search space: 8133471348
effective search space used: 8133471348
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)