TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0237.12
         (2349 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC84623 similar to GP|9759369|dbj|BAB09828.1 gene_id:MYJ24.10~re...   326  6e-89
CA916984 similar to GP|9759369|db gene_id:MYJ24.10~ref|NP_055178...    44  6e-04
AW689741 similar to GP|9759369|dbj gene_id:MYJ24.10~ref|NP_05517...    41  0.005
TC85840 similar to SP|P35016|ENPL_CATRO Endoplasmin homolog prec...    35  0.34
BF640677 weakly similar to GP|8843797|dbj contains similarity to...    32  2.2
TC87556 similar to GP|14517530|gb|AAK62655.1 At1g48370/F11A17_27...    32  2.2
TC90503 weakly similar to GP|22655264|gb|AAM98222.1 unknown prot...    30  8.5

>TC84623 similar to GP|9759369|dbj|BAB09828.1
           gene_id:MYJ24.10~ref|NP_055178.1~similar to unknown
           protein {Arabidopsis thaliana}, partial (3%)
          Length = 634

 Score =  326 bits (836), Expect = 6e-89
 Identities = 160/175 (91%), Positives = 167/175 (95%)
 Frame = +3

Query: 3   SPSPESIFLEDFGQTVDLTRRIREVLLNYPEGTTVLKELIQNADDAGATTVSLCLDRRSH 62
           SP+PESIFLEDFGQTVDLTRRIREVLLNYPEGTTVLKELIQNADDAGATTVSLCLDRRSH
Sbjct: 108 SPAPESIFLEDFGQTVDLTRRIREVLLNYPEGTTVLKELIQNADDAGATTVSLCLDRRSH 287

Query: 63  AGDSLLSSSLSQWQGPALLAYNDAVFTEDDFISISKIGGSSKHGQASKTGRFGVGFNSVY 122
             +SLLS SLSQWQGPALLAYNDAVF+E+DF+SISKIGGSSKHGQASKTGRFGVGFNSVY
Sbjct: 288 GRESLLSDSLSQWQGPALLAYNDAVFSEEDFVSISKIGGSSKHGQASKTGRFGVGFNSVY 467

Query: 123 HLTDLPSFVSGKYVVLFDPQGVYLPRVSAANPGKRIDFTGSSALSLYKDQFSPYC 177
           HLTDLPSFVSGKY+VLFDPQGVYLPRVSA NPGKRIDFT SSALS Y DQF P+C
Sbjct: 468 HLTDLPSFVSGKYLVLFDPQGVYLPRVSAXNPGKRIDFTSSSALSFYXDQFFPFC 632



 Score =  158 bits (400), Expect = 2e-38
 Identities = 78/162 (48%), Positives = 105/162 (64%)
 Frame = +3

Query: 1380 EAFGQHEALTTRLKHILEMYADGPGTLFELVQNAEDAGASEVIFLLDKSQYGTSSVLSPE 1439
            E FGQ   LT R++ +L  Y +G   L EL+QNA+DAGA+ V   LD+  +G  S+LS  
Sbjct: 135  EDFGQTVDLTRRIREVLLNYPEGTTVLKELIQNADDAGATTVSLCLDRRSHGRESLLSDS 314

Query: 1440 MADWQGPALYCFNDSVFTPQDLYAISRIGQESKLEKAFAIGRFGLGFNCVYHFTDIPMFV 1499
            ++ WQGPAL  +ND+VF+ +D  +IS+IG  SK  +A   GRFG+GFN VYH TD+P FV
Sbjct: 315  LSQWQGPALLAYNDAVFSEEDFVSISKIGGSSKHGQASKTGRFGVGFNSVYHLTDLPSFV 494

Query: 1500 SGENIVMFDPHASNLPGISPSHPGLRIKFAGRKILEQFPDQF 1541
            SG+ +V+FDP    LP +S  +PG RI F     L  + DQF
Sbjct: 495  SGKYLVLFDPQGVYLPRVSAXNPGKRIDFTSSSALSFYXDQF 620


>CA916984 similar to GP|9759369|db gene_id:MYJ24.10~ref|NP_055178.1~similar to
            unknown protein {Arabidopsis thaliana}, partial (3%)
          Length = 696

 Score = 44.3 bits (103), Expect = 6e-04
 Identities = 42/187 (22%), Positives = 80/187 (42%), Gaps = 7/187 (3%)
 Frame = +1

Query: 1199 GDGFATSDEVVLDGPLHLAPYIRVIPVDLAVFKNLFLELGIREFLQPSDYVNILFRMANK 1258
            G    T+D +     ++L+P+   +P     F  +  +LG+++ L  S   ++L  +   
Sbjct: 37   GTRLVTADALFARLMINLSPFAFELPAVYLPFAKILKDLGLQDVLTLSAAKDLLLNLQKA 216

Query: 1259 KGSSPLDTQEIRAVMLIVHHLAEVYLHGQ-------KVQLYLPDVSGRLFLAGDLVYNDA 1311
             G   L+  E+RAVM I++ + +    G        K ++ +PD   RL  +   VY D+
Sbjct: 217  CGYQHLNPNELRAVMEILNFICDQIGEGNTFGRYDWKSEVIVPDDGCRLVHSTSCVYVDS 396

Query: 1312 PWLLGSEDPDGSFGNAPSVTWNAKRTVQKFVHGNISNDVAEKLGVRSLRRMLLAESADSM 1371
                     DGS             +  +FVH ++   V   LG++ L  +++ E  ++ 
Sbjct: 397  ---------DGS-----RYVKCIDTSRIRFVHADLPERVCIVLGIKKLSDVVIEELDENH 534

Query: 1372 NFGLSGA 1378
            N    G+
Sbjct: 535  NLETLGS 555


>AW689741 similar to GP|9759369|dbj gene_id:MYJ24.10~ref|NP_055178.1~similar to
            unknown protein {Arabidopsis thaliana}, partial (1%)
          Length = 651

 Score = 41.2 bits (95), Expect = 0.005
 Identities = 14/35 (40%), Positives = 23/35 (65%)
 Frame = +2

Query: 2083 GIHGQPSLEWLQLLWNYLKANCDDLLMFSKWPILP 2117
            G  G PS EW+++ W   K + ++L +FS WP++P
Sbjct: 8    GSQGGPSSEWVRIFWKNFKGSQEELSLFSDWPLIP 112



 Score = 37.7 bits (86), Expect = 0.053
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = +2

Query: 675 PTSSWFVLFWQYLGKQSEILPLFKDWPILPSTSG 708
           P+S W  +FW+      E L LF DWP++P+  G
Sbjct: 23  PSSEWVRIFWKNFKGSQEELSLFSDWPLIPAFLG 124


>TC85840 similar to SP|P35016|ENPL_CATRO Endoplasmin homolog precursor
           (GRP94 homolog). [Rosy periwinkle  Madagascar
           periwinkle], partial (92%)
          Length = 2791

 Score = 35.0 bits (79), Expect = 0.34
 Identities = 35/127 (27%), Positives = 58/127 (45%), Gaps = 17/127 (13%)
 Frame = +1

Query: 23  RIREVLLN--YPEGTTVLKELIQNADDAGATTVSLCLDRRSHAGD---SLLSSSLSQWQG 77
           R+ ++++N  Y      L+ELI NA DA      L L  +   G+   + L   +   + 
Sbjct: 307 RLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKDILGEGDNAKLEIQIKLDKE 486

Query: 78  PALLAYNDAVF--TEDDFI----SISKIGGSS------KHGQASKTGRFGVGFNSVYHLT 125
             +L+  D     T++D +    +I+K G S+        G  +  G+FGVGF SVY + 
Sbjct: 487 KKILSIRDRGIGMTKEDLVKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLVA 666

Query: 126 DLPSFVS 132
           D    +S
Sbjct: 667 DYVEVIS 687


>BF640677 weakly similar to GP|8843797|dbj contains similarity to unknown
            protein~gb|AAF22257.1~gene_id:MZN1.21 {Arabidopsis
            thaliana}, partial (40%)
          Length = 674

 Score = 32.3 bits (72), Expect = 2.2
 Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
 Frame = +3

Query: 2054 FLSCQLLEKLLVKLLPVEWQHASLVSWTPGIHGQPSLEWLQLL--WNYLKANCDDLLMFS 2111
            F+   L  KL++ +L     +ASL+SW   I     L W ++   W++ + NC  +   S
Sbjct: 120  FIGGSLRYKLILDILQSLLPNASLLSWLFRIGWMGKLLWTEIFQKWSHCRRNCKRI*CLS 299

Query: 2112 KW 2113
             W
Sbjct: 300  MW 305


>TC87556 similar to GP|14517530|gb|AAK62655.1 At1g48370/F11A17_27 {Arabidopsis
            thaliana}, partial (48%)
          Length = 1309

 Score = 32.3 bits (72), Expect = 2.2
 Identities = 23/89 (25%), Positives = 43/89 (47%)
 Frame = +1

Query: 1709 KGTSEASTSNSHNFVPWACVAAYLNSVKHGEDLVDSAEVEDDCLVSSDLFQFASLPMHPR 1768
            K   +  T  S    P+A V  Y N    G     S  + D+CL+   +F  A++ ++  
Sbjct: 658  KAFPDLGTHKSQYPAPYAIV--YRNMAILGVQGFSS--LPDNCLLLCYIFFGAAIVVNLI 825

Query: 1769 ENFEGRAFCFLPLPISTGLPAHVNAYFEL 1797
            ++  G+   F+PLP++  +P ++  YF +
Sbjct: 826  KDLVGKVGRFIPLPMAMAIPFYLGPYFAI 912


>TC90503 weakly similar to GP|22655264|gb|AAM98222.1 unknown protein
           {Arabidopsis thaliana}, partial (8%)
          Length = 846

 Score = 30.4 bits (67), Expect = 8.5
 Identities = 20/54 (37%), Positives = 28/54 (51%)
 Frame = +2

Query: 808 MDEFNIRFCRRLPIYQVYHREPTQDSQFSDLENPRKYLPPLDVPEFILVGIEFI 861
           +D  N R C   P YQVYH       +F+ L+  +K L   +V E I V +EF+
Sbjct: 539 LDSVN-RSCSFHPSYQVYH----HSIEFAGLKVTKKLLEKKNV*EIINVALEFV 685


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.321    0.139    0.420 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 76,427,698
Number of Sequences: 36976
Number of extensions: 1166940
Number of successful extensions: 5317
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 5125
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5315
length of query: 2349
length of database: 9,014,727
effective HSP length: 112
effective length of query: 2237
effective length of database: 4,873,415
effective search space: 10901829355
effective search space used: 10901829355
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 66 (30.0 bits)