BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0231b.3
(490 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC79266 homologue to GP|3243256|gb|AAC24007.1| phosphoribosylpyr... 305 e-111
TC82847 homologue to PIR|T05294|T05294 amidophosphoribosyltransf... 176 1e-44
TC82855 weakly similar to PIR|T45829|T45829 hypothetical protein... 36 0.038
TC77851 similar to GP|15982840|gb|AAL09767.1 AT5g03040/F15A17_70... 33 0.19
BQ143866 33 0.19
TC83508 weakly similar to PIR|D96766|D96766 protein glucosyltran... 33 0.19
BQ144306 weakly similar to GP|23093252|gb| CG13731-PA {Drosophil... 33 0.32
TC86269 similar to PIR|T05726|T05726 GH1 protein - soybean (frag... 32 0.42
CA859251 similar to GP|21305823|gb DNA polymerase I {Hz-1 insect... 32 0.42
TC77337 weakly similar to GP|4019275|gb|AAC95573.1| orf 48 {Atel... 32 0.42
TC78138 similar to GP|2792155|emb|CAA11226.1 chalcone reductase ... 32 0.42
TC89702 similar to PIR|T01157|T01157 hypothetical protein F7N22.... 32 0.72
BQ152925 weakly similar to GP|6448504|emb| Trihydrophobin {Clavi... 32 0.72
TC79404 weakly similar to GP|5919185|gb|AAD56235.1| arabinogalac... 31 0.94
TC81307 weakly similar to GP|4335772|gb|AAD17449.1| unknown prot... 31 0.94
TC88762 similar to GP|22136928|gb|AAM91808.1 unknown protein {Ar... 31 1.2
BQ144077 weakly similar to GP|6523547|emb| hydroxyproline-rich g... 31 1.2
TC83962 similar to PIR|B86289|B86289 hypothetical protein AAF719... 30 1.6
TC87806 similar to GP|21592931|gb|AAM64881.1 phosphoserine amino... 30 1.6
TC76720 similar to GP|11121502|emb|CAC14888. putative extensin {... 30 1.6
>TC79266 homologue to GP|3243256|gb|AAC24007.1| phosphoribosylpyrophosphate
amidotransferase {Vigna unguiculata}, partial (46%)
Length = 1187
Score = 305 bits (781), Expect(2) = e-111
Identities = 154/166 (92%), Positives = 163/166 (97%)
Frame = +2
Query: 325 FSLPSSVVFGKSVYESRRLFGEILATESPVECDVVIAVPDSGVVAALGYAAKAGVPFQQG 384
F+LP+SVVFG+SVYESRR FGE+LATESPV+CDVVIAVPDSGVVAALGYAAKAGVPFQQG
Sbjct: 188 FALPNSVVFGRSVYESRRRFGEVLATESPVDCDVVIAVPDSGVVAALGYAAKAGVPFQQG 367
Query: 385 LIRSHYVGRTFIEPSQKIRDLGVKLKLSPVKAVLEGKRVVVVDDSIVRGTTSSKIVRLIK 444
LIRSHYVGRTFIEPSQKIRD GVKLKLSPV+AVLEGKRVVVVDDSIVRGTTSSKIVRL+K
Sbjct: 368 LIRSHYVGRTFIEPSQKIRDFGVKLKLSPVRAVLEGKRVVVVDDSIVRGTTSSKIVRLLK 547
Query: 445 EAGAKEVHMRIACPPIIGSCYYGVDTPSSEELISNRMSVDEIREFI 490
EAGAKEVHMRIA PPIIGSCYYGVDTPSSEELISNRMSV+EIR+FI
Sbjct: 548 EAGAKEVHMRIASPPIIGSCYYGVDTPSSEELISNRMSVEEIRDFI 685
Score = 115 bits (288), Expect(2) = e-111
Identities = 52/60 (86%), Positives = 58/60 (96%)
Frame = +1
Query: 266 RSNGAVVFASETCALDLIEAEYEREVYPGEVLVVDKNGLQSLCLVSHPEPKQCIFEHIYF 325
RSNGAVVFASETCALDLIEA YEREV+PGEV+VVD NG+QSLCL++HP+PKQCIFEHIYF
Sbjct: 10 RSNGAVVFASETCALDLIEATYEREVFPGEVIVVDNNGIQSLCLMAHPQPKQCIFEHIYF 189
>TC82847 homologue to PIR|T05294|T05294 amidophosphoribosyltransferase (EC
2.4.2.14) 2 precursor - Arabidopsis thaliana, partial
(17%)
Length = 604
Score = 176 bits (447), Expect = 1e-44
Identities = 109/177 (61%), Positives = 121/177 (67%), Gaps = 8/177 (4%)
Frame = +2
Query: 1 MAASNFSTLSSSSSSFSKSKPFTNTPCFPGNKTLHNPTSFPNPTTLSHAHKPPY-PSPCK 59
MAA+ TLSSS + S P N F + +LH PT +LS KP + S K
Sbjct: 59 MAATQ--TLSSSLAKPSLLPP-NNNRFF--STSLHKPTL----PSLSDTRKPLFLTSSSK 211
Query: 60 N-------HNTTFPEPLCNDDEDQKPREECGVVGIYGDPEASRLCYLALHALQHRGQEGA 112
N N P+ D KPREECGVVGIYGD EASRLCYLALHALQHRGQEGA
Sbjct: 212 NPISDIILSNKNHPQDEVVFINDDKPREECGVVGIYGDSEASRLCYLALHALQHRGQEGA 391
Query: 113 GIVTVHNNKIFQSVTGVGLVADVFTEAKLDQLPGTLAIGHVRYSTAGQSMLKNVQPF 169
GIVTV+NN + QS+TGVGLV+DVF E KLDQLPG+LAIGHVRYSTAGQSMLKNVQPF
Sbjct: 392 GIVTVNNN-VLQSITGVGLVSDVFNETKLDQLPGSLAIGHVRYSTAGQSMLKNVQPF 559
>TC82855 weakly similar to PIR|T45829|T45829 hypothetical protein F2K15.100
- Arabidopsis thaliana, partial (63%)
Length = 1447
Score = 35.8 bits (81), Expect = 0.038
Identities = 25/74 (33%), Positives = 32/74 (42%), Gaps = 10/74 (13%)
Frame = -2
Query: 13 SSSFSKSKPFTNTPCFPGNKTLHNPTSF----------PNPTTLSHAHKPPYPSPCKNHN 62
SSSF KP NTP P N S P+PT+LS HKP P H
Sbjct: 486 SSSFPLQKPLDNTP*LPSPSP*ENTPSSNTPKQPHLPQPHPTSLSTLHKPLRHHP---HQ 316
Query: 63 TTFPEPLCNDDEDQ 76
+ +P N+D+ +
Sbjct: 315 NS*HDPTSNNDKPE 274
>TC77851 similar to GP|15982840|gb|AAL09767.1 AT5g03040/F15A17_70 {Arabidopsis
thaliana}, partial (42%)
Length = 1921
Score = 33.5 bits (75), Expect = 0.19
Identities = 23/79 (29%), Positives = 34/79 (42%), Gaps = 2/79 (2%)
Frame = +1
Query: 1 MAASNFSTLSSSSSSFSKSKPFTNTPCFPGNKTLHNPTSFPNPTT--LSHAHKPPYPSPC 58
M N S+ SS + ++ + F N H+PT+ NP + KPP P+
Sbjct: 1027 MEKENNSSAKSSIRGITSAEISKSFARFQLNSENHSPTASQNPGSPNFQSNSKPPKPAIV 1206
Query: 59 KNHNTTFPEPLCNDDEDQK 77
K N P+ C D+D K
Sbjct: 1207 KKLNKASPKVSCIMDDDTK 1263
>BQ143866
Length = 999
Score = 33.5 bits (75), Expect = 0.19
Identities = 19/53 (35%), Positives = 26/53 (48%), Gaps = 5/53 (9%)
Frame = +1
Query: 21 PFTNTPCFPGNKTLHNPTSFPN-----PTTLSHAHKPPYPSPCKNHNTTFPEP 68
P+ + CFP ++T PTSFP P + H SPC + + TFP P
Sbjct: 556 PYPTSICFPPHQT---PTSFPPFRITIPPCVPHVPPVSAFSPCSHFHCTFPYP 705
>TC83508 weakly similar to PIR|D96766|D96766 protein glucosyltransferase
F2P9.25 [imported] - Arabidopsis thaliana, partial (13%)
Length = 607
Score = 33.5 bits (75), Expect = 0.19
Identities = 28/82 (34%), Positives = 35/82 (42%), Gaps = 18/82 (21%)
Frame = -2
Query: 9 LSSSSSSFSKSKPFT-NTPCFPGNKTL----------HNPTS-------FPNPTTLSHAH 50
LS S SSF K+ + TP FP L H PT+ P+ T+ S H
Sbjct: 327 LSPSPSSFPKNLSVSPQTPQFPEPSYLLLQLEPQHPTHPPTASHSYTDLHPSATSASPHH 148
Query: 51 KPPYPSPCKNHNTTFPEPLCND 72
KP P+P HN + PL D
Sbjct: 147 KPTLPTPSSIHNESKTIPLHGD 82
>BQ144306 weakly similar to GP|23093252|gb| CG13731-PA {Drosophila
melanogaster}, partial (4%)
Length = 1261
Score = 32.7 bits (73), Expect = 0.32
Identities = 23/67 (34%), Positives = 31/67 (45%), Gaps = 8/67 (11%)
Frame = -1
Query: 10 SSSSSSFSKSKPFTNTPCF---PGNKTLHNPTSF-----PNPTTLSHAHKPPYPSPCKNH 61
+S+S + + S PF++ P P TLH P+ P P T H PP P+P N
Sbjct: 556 ASNSPTATPSSPFSSLPSHHPPPPPHTLHLPSPRQHPPRPPPPTRQRPH-PPQPTPTPNL 380
Query: 62 NTTFPEP 68
T P P
Sbjct: 379 RATTPLP 359
>TC86269 similar to PIR|T05726|T05726 GH1 protein - soybean (fragment),
partial (84%)
Length = 1572
Score = 32.3 bits (72), Expect = 0.42
Identities = 24/74 (32%), Positives = 32/74 (42%), Gaps = 2/74 (2%)
Frame = -1
Query: 10 SSSSSSFSKSKPF--TNTPCFPGNKTLHNPTSFPNPTTLSHAHKPPYPSPCKNHNTTFPE 67
S+SSS FS N C P N S P+ TT+ A +PP P P + +
Sbjct: 324 SNSSSLFSHHTNLGELNHNCPPMNNQTIPSNSVPSSTTVCAALRPP*PQPSETFR*PTSK 145
Query: 68 PLCNDDEDQKPREE 81
P N + Q+ EE
Sbjct: 144 PQFNYQQQQEDFEE 103
>CA859251 similar to GP|21305823|gb DNA polymerase I {Hz-1 insect virus}
[Heliothis zea virus 1], partial (2%)
Length = 803
Score = 32.3 bits (72), Expect = 0.42
Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Frame = +2
Query: 24 NTPCFPG--NKTLHNPTSFPNPTTLSHAHKPPYPSPCKNHNTTF-PEPLCNDDEDQKPRE 80
NT + G N+ +N T+ P P SH+H P+P P +H+ F P N Q P +
Sbjct: 521 NTAAYYGSLNQGYYNSTNPPPPHPHSHSHPHPHPPPPHHHHHPFYNAPYQN--YQQVPHQ 694
Query: 81 ECGVVGIYGDPEASRLC 97
I G+ + S C
Sbjct: 695 HIPYRSIEGEDDNSFSC 745
>TC77337 weakly similar to GP|4019275|gb|AAC95573.1| orf 48 {Ateline
herpesvirus 3}, partial (8%)
Length = 986
Score = 32.3 bits (72), Expect = 0.42
Identities = 22/66 (33%), Positives = 32/66 (48%)
Frame = -2
Query: 3 ASNFSTLSSSSSSFSKSKPFTNTPCFPGNKTLHNPTSFPNPTTLSHAHKPPYPSPCKNHN 62
+S+ S+ SSSSSS S S P +++ P + P S L PYP P + N
Sbjct: 670 SSSSSSSSSSSSSSSWSSPSSSSSSSPFSSAPPAPPSGAFFELLLLLELLPYPPPSSDDN 491
Query: 63 TTFPEP 68
++ P P
Sbjct: 490 SSSPSP 473
>TC78138 similar to GP|2792155|emb|CAA11226.1 chalcone reductase {Sesbania
rostrata}, partial (83%)
Length = 1289
Score = 32.3 bits (72), Expect = 0.42
Identities = 16/51 (31%), Positives = 22/51 (42%), Gaps = 3/51 (5%)
Frame = -1
Query: 28 FPGNKTLHNPTSFPNPTTLSHAHKPPYPSPCKNH---NTTFPEPLCNDDED 75
F + T H+P + N + L H H P CK H P +C D+ D
Sbjct: 1055 FSSSYTFHDPIIYSNKSLLKHHHPTALPRFCKVHYQIQIFLPFEICFDESD 903
>TC89702 similar to PIR|T01157|T01157 hypothetical protein F7N22.3 -
Arabidopsis thaliana, partial (67%)
Length = 988
Score = 31.6 bits (70), Expect = 0.72
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 5/41 (12%)
Frame = +2
Query: 34 LHNPTSF-----PNPTTLSHAHKPPYPSPCKNHNTTFPEPL 69
LHNPT+ P P + +H H P P +H+T P PL
Sbjct: 2 LHNPTTTTTPLSPPPNSQTHHHPPLTPPHIHHHHTHLPLPL 124
>BQ152925 weakly similar to GP|6448504|emb| Trihydrophobin {Claviceps
fusiformis}, partial (13%)
Length = 614
Score = 31.6 bits (70), Expect = 0.72
Identities = 17/64 (26%), Positives = 27/64 (41%)
Frame = +2
Query: 5 NFSTLSSSSSSFSKSKPFTNTPCFPGNKTLHNPTSFPNPTTLSHAHKPPYPSPCKNHNTT 64
N +L ++ S P FP +NP P+ T+ + +PP P+P +N
Sbjct: 164 NVQSLDEKKATNLDSFNLPPNPFFPPPLLPNNPLQPPSTPTIPNPFQPPTPTPLVPNNPF 343
Query: 65 FPEP 68
P P
Sbjct: 344 LPPP 355
>TC79404 weakly similar to GP|5919185|gb|AAD56235.1| arabinogalactan protein
Pop14A9 {Populus x canescens}, partial (23%)
Length = 1104
Score = 31.2 bits (69), Expect = 0.94
Identities = 22/75 (29%), Positives = 32/75 (42%), Gaps = 4/75 (5%)
Frame = +1
Query: 10 SSSSSSFSKSKPFTNTPCFPGNKTLHNPTSF----PNPTTLSHAHKPPYPSPCKNHNTTF 65
+ S SSFS F+ P +P +K L++P + P P H H+ C NH T
Sbjct: 85 NKSLSSFSFHSFFSFHPHYPFHKHLNHPQNLLKKHPLPQKQQHHHQNH*SPHCLNHQTQQ 264
Query: 66 PEPLCNDDEDQKPRE 80
L + K R+
Sbjct: 265 TPSLTTSQQSLKRRK 309
>TC81307 weakly similar to GP|4335772|gb|AAD17449.1| unknown protein
{Arabidopsis thaliana}, partial (31%)
Length = 1171
Score = 31.2 bits (69), Expect = 0.94
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +2
Query: 3 ASNFSTLSSSSSSFSKSKPFTNTPCFPGNKTLHNPTSFPNPTTLSHAHKPP 53
+S+ + S S SS S S + P + LH+P F + T++SH H PP
Sbjct: 539 SSSSPSPSPSPSSASPSPSLKSFALSPPSSFLHSP--FSSSTSVSHGHSPP 685
>TC88762 similar to GP|22136928|gb|AAM91808.1 unknown protein {Arabidopsis
thaliana}, partial (3%)
Length = 805
Score = 30.8 bits (68), Expect = 1.2
Identities = 22/63 (34%), Positives = 30/63 (46%)
Frame = +3
Query: 2 AASNFSTLSSSSSSFSKSKPFTNTPCFPGNKTLHNPTSFPNPTTLSHAHKPPYPSPCKNH 61
A+S ST +S +S S P + T P + P S P PTT S PP P+P +
Sbjct: 111 ASSPVSTTTSPPASTPASSPVSTTTSPPAS----TPASSPVPTTTS----PPAPTPASSP 266
Query: 62 NTT 64
+T
Sbjct: 267 VST 275
>BQ144077 weakly similar to GP|6523547|emb| hydroxyproline-rich glycoprotein
DZ-HRGP {Volvox carteri f. nagariensis}, partial (16%)
Length = 463
Score = 30.8 bits (68), Expect = 1.2
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1
Query: 28 FPGNKTLHNPTSFPNPTTLSHAHKPPYPSP 57
FP + + H P +FP P T H PP+P P
Sbjct: 157 FPASPS-HPPRAFPPPPTSPKPHPPPHPHP 243
>TC83962 similar to PIR|B86289|B86289 hypothetical protein AAF71991.1
[imported] - Arabidopsis thaliana, partial (11%)
Length = 679
Score = 30.4 bits (67), Expect = 1.6
Identities = 26/82 (31%), Positives = 35/82 (41%), Gaps = 14/82 (17%)
Frame = +2
Query: 2 AASNFSTLSSSSSSFSKSKPFTNTPCFPGNKTLHNPTSFPN------PT----TLSHAHK 51
++S ++ SSSSS + TP P +L +PT N PT TL+
Sbjct: 95 SSSTSTSTSSSSSPPPTPSTSSTTPSPPPPTSLSSPTPTSNHLSSA*PTTPTNTLTAVPS 274
Query: 52 PPYPSPCKN----HNTTFPEPL 69
P SPC N T+ P PL
Sbjct: 275 TPLNSPCSNLHLPQQTSLPSPL 340
>TC87806 similar to GP|21592931|gb|AAM64881.1 phosphoserine
aminotransferase {Arabidopsis thaliana}, partial (58%)
Length = 1010
Score = 30.4 bits (67), Expect = 1.6
Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +1
Query: 35 HNPTSFPNPTTLSHAHKPPY-PSPCKNHNTTFPEPLCNDDEDQKP 78
H P S P PTTLS + P+ P P + + P PL N + P
Sbjct: 37 HKPISSPKPTTLSSTNPSPHSPQP----SPSAPTPLSNPFQSNAP 159
>TC76720 similar to GP|11121502|emb|CAC14888. putative extensin {Nicotiana
sylvestris}, partial (51%)
Length = 1290
Score = 30.4 bits (67), Expect = 1.6
Identities = 26/79 (32%), Positives = 33/79 (40%)
Frame = +1
Query: 2 AASNFSTLSSSSSSFSKSKPFTNTPCFPGNKTLHNPTSFPNPTTLSHAHKPPYPSPCKNH 61
A S T +++SS S S TP P N P P PT H+ PP PSP N
Sbjct: 553 ADSPAPTPATNSSLNSPSPTPIPTPS-PANSP---PAPTPTPTPSPHSDSPPAPSP-DNS 717
Query: 62 NTTFPEPLCNDDEDQKPRE 80
++ P P + P E
Sbjct: 718 PSSSPSPSPSSSPAPSPDE 774
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.318 0.136 0.397
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,311,709
Number of Sequences: 36976
Number of extensions: 257503
Number of successful extensions: 2165
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 2028
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2132
length of query: 490
length of database: 9,014,727
effective HSP length: 100
effective length of query: 390
effective length of database: 5,317,127
effective search space: 2073679530
effective search space used: 2073679530
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)
Lotus: description of TM0231b.3