TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0221.5
         (190 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC83524 weakly similar to GP|8164030|gb|AAF73960.1| SGS3 {Arabid...    28  2.8
BG587157 similar to PIR|B84852|B848 probable receptor-like prote...    27  4.8
CA989447 similar to PIR|T05342|T05 L-ascorbate peroxidase homolo...    26  8.2

>TC83524 weakly similar to GP|8164030|gb|AAF73960.1| SGS3 {Arabidopsis
           thaliana}, partial (22%)
          Length = 1231

 Score = 27.7 bits (60), Expect = 2.8
 Identities = 14/38 (36%), Positives = 21/38 (54%)
 Frame = -3

Query: 123 QRTYITKVLKGFYMDKSCPLCTLLILRSLNVNKDPFRP 160
           Q T IT+ +K F +  SCPL   ++L     N + +RP
Sbjct: 272 QCTVITEAIKEFLIPHSCPLVVFILLVFRIHNDNHWRP 159


>BG587157 similar to PIR|B84852|B848 probable receptor-like protein kinase
           [imported] - Arabidopsis thaliana, partial (4%)
          Length = 647

 Score = 26.9 bits (58), Expect = 4.8
 Identities = 16/36 (44%), Positives = 22/36 (60%)
 Frame = +3

Query: 133 GFYMDKSCPLCTLLILRSLNVNKDPFRP*EKNEELL 168
           G Y   +CPL  LLI  S +VN++ F+  EKN  L+
Sbjct: 384 GRYSPHACPLY-LLIQVSTHVNQERFKQKEKNPTLV 488


>CA989447 similar to PIR|T05342|T05 L-ascorbate peroxidase homolog F10M6.50 -
           Arabidopsis thaliana, partial (78%)
          Length = 668

 Score = 26.2 bits (56), Expect = 8.2
 Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
 Frame = +1

Query: 112 IEYLKDEVFMYQRTYITKVLKGFYMDKSCPLCTLLILRSLNVNKDPFRP*EKNEEL-LDP 170
           +E L  +     +T    +LKG ++ K   L  LL+ R  ++ KD F+   KN  L L+P
Sbjct: 424 VEVLLSQFRSADKTRRGLILKGNFLRK---LLMLLV*RDASIKKD-FQ--HKN**LCLEP 585

Query: 171 EVLYLSAIKALLYLASH 187
            +L +  ++ALL L  H
Sbjct: 586 TLLEVKVLEALLLLTIH 636


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.359    0.163    0.534 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,416,849
Number of Sequences: 36976
Number of extensions: 65367
Number of successful extensions: 757
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 753
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 757
length of query: 190
length of database: 9,014,727
effective HSP length: 91
effective length of query: 99
effective length of database: 5,649,911
effective search space: 559341189
effective search space used: 559341189
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 14 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 37 (21.8 bits)
S2: 55 (25.8 bits)