BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0218.19
(794 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC76597 similar to GP|9759419|dbj|BAB09906.1 xylosidase {Arabido... 790 0.0
TC87947 similar to GP|10178060|dbj|BAB11424. beta-xylosidase {Ar... 499 e-141
TC90739 similar to GP|10178060|dbj|BAB11424. beta-xylosidase {Ar... 358 4e-99
BE204139 similar to PIR|T52390|T52 beta-1 4-xylosidase [imported... 349 6e-97
TC86821 weakly similar to GP|18086336|gb|AAL57631.1 At1g78060/F2... 283 2e-76
TC91323 similar to GP|18086336|gb|AAL57631.1 At1g78060/F28K19_32... 225 9e-69
AW587289 similar to GP|14194121|gb At1g02640/T14P4_11 {Arabidops... 257 1e-68
AW694633 similar to GP|9759419|dbj xylosidase {Arabidopsis thali... 193 6e-51
BF635270 similar to GP|18086336|gb At1g78060/F28K19_32 {Arabidop... 159 2e-42
AW587061 similar to PIR|T49983|T49 beta-xylosidase-like protein ... 166 3e-41
TC76588 similar to GP|9759419|dbj|BAB09906.1 xylosidase {Arabido... 159 3e-39
TC84922 similar to GP|14194121|gb|AAK56255.1 At1g02640/T14P4_11 ... 104 1e-22
AW697240 similar to GP|14194121|gb| At1g02640/T14P4_11 {Arabidop... 103 3e-22
AW691903 similar to GP|14194121|gb| At1g02640/T14P4_11 {Arabidop... 94 2e-19
TC92777 weakly similar to PIR|T49928|T49928 beta-glucosidase-lik... 68 1e-11
TC86822 weakly similar to GP|18086336|gb|AAL57631.1 At1g78060/F2... 63 4e-10
TC93180 similar to PIR|T51283|T51283 glucan 1 3-beta-glucosidase... 62 7e-10
AI974314 weakly similar to GP|18086336|gb| At1g78060/F28K19_32 {... 60 4e-09
TC82465 similar to PIR|T45637|T45637 beta-D-glucan exohydrolase-... 51 2e-06
TC82424 similar to PIR|T51283|T51283 glucan 1 3-beta-glucosidase... 45 8e-05
>TC76597 similar to GP|9759419|dbj|BAB09906.1 xylosidase {Arabidopsis
thaliana}, partial (77%)
Length = 2713
Score = 790 bits (2040), Expect = 0.0
Identities = 399/774 (51%), Positives = 522/774 (66%), Gaps = 1/774 (0%)
Frame = +3
Query: 4 NLLFLSLFLSLLVLLPILTSSQKHACNKASPKTSNFPFCDTTLSYEARAKDLVSRLTLQE 63
NL+ L +S+LV L AC+ + T ++ FC+T + AR +DL+ RL L E
Sbjct: 57 NLITFMLLISILVTLS--EGRVPFACDPKNGLTRSYKFCNTRVPIHARVQDLIGRLALPE 230
Query: 64 KAQQLVNPSSGIARLGVPSYEWWSEALHGVSNLGPGTRFNRTVPGATSFPAVILSAASFN 123
K + +VN + + RLG+ YEWWSEALHGVSN+GPGT+F ATSFP VI +AASFN
Sbjct: 231 KIRLVVNNAIAVPRLGIQGYEWWSEALHGVSNVGPGTKFGGAFSAATSFPQVITTAASFN 410
Query: 124 ATLWYNMGQVVSTEARAMYNVDLAGLTFWSPNVNVFRDPRWGRGQETPGEDPLVVSRYAV 183
+LW +G++VS EARAMYN AGLTFWSPNVN+FRDPRWGRGQETPGEDP V +YA
Sbjct: 411 QSLWLEIGRIVSDEARAMYNGGAAGLTFWSPNVNIFRDPRWGRGQETPGEDPTVAGKYAA 590
Query: 184 KYVRGLQDVEDEESIKADRLKVSSCCKHYTAYDVDNWKGVDRFHFDAKVTKQDLEDTYQP 243
YV+GLQ + +RLKV++CCKHYTAYD+DNW GVDRFHF+AKV+KQDL DTY
Sbjct: 591 SYVQGLQG-----NGAGNRLKVAACCKHYTAYDLDNWNGVDRFHFNAKVSKQDLADTYDV 755
Query: 244 PFKSCVVEGHVSSVMCSYNRVNGIPTCADPDLLKGVIRGQWGLDGYIVSDCDSVQVYYES 303
PFK+CV +G V+SVMCSYN+VNG PTCADP+LL+ IRG+WGL+GYIVSDCDSV V Y++
Sbjct: 756 PFKACVRDGKVASVMCSYNQVNGKPTCADPELLRNTIRGEWGLNGYIVSDCDSVGVLYDN 935
Query: 304 IHYTATPEDAVALALKAGLNMNCGDYLRKYTANAVKLKKVDVSTVDQALVYNYIVLMRLG 363
HYT TPE A A A+KAGL+++CG +L +T A+K + + ++ AL V MRLG
Sbjct: 936 QHYTRTPEQAAAAAIKAGLDLDCGPFLALHTDGAIKQGLISENDLNLALANLITVQMRLG 1115
Query: 364 FFDNPKSLPFANLGPSDVCTKENQLLALEAAKQGIVLLENSG-VLPLSKTNIKNLAVIGP 422
FD + P+ NLG DVC + +ALEAA+QGIVLL+N G LPLS T + + VIGP
Sbjct: 1116MFDG-DAQPYGNLGTRDVCLPSHNDVALEAARQGIVLLQNKGNALPLSPTRYRTVGVIGP 1292
Query: 423 NANATTVMISNYAGIPCRYTSPLQGLQKYISSVTYAPGCGNVKCGDQSLFAAATKAAAPA 482
N++ T MI NYAGI C YT+PLQG+ +Y+ ++ A GC +V CG LF + + A A
Sbjct: 1293NSDVTVTMIGNYAGIACGYTTPLQGIARYVKTIHQA-GCKDVGCGGNQLFGLSEQVARQA 1469
Query: 483 DAVVLVVGLDQSIEAEGLDRVNLTLPGFQEKLVKDVADATKGKVILVIMAAGPIDISFTK 542
DA VLV+GLDQSIEAE DR L LPG Q++LV VA A +G VILV+M+ GPID++F K
Sbjct: 1470DATVLVMGLDQSIEAEFRDRTGLLLPGHQQELVSRVARAARGPVILVLMSGGPIDVTFAK 1649
Query: 543 SIRNIGGILWVGYPGQAGGDAIAQVIFGEYNPGGRSPFTWYPQSYADQVPMTDMNMRANS 602
+ I ILWVGYPGQ+GG AIA VIFG NP GR P TWYPQ Y +VPMT+M+MRAN
Sbjct: 1650NDPKISAILWVGYPGQSGGTAIADVIFGRTNPSGRLPNTWYPQDYVRKVPMTNMDMRANP 1829
Query: 603 SRNFPGRTYRFYNGNSLYEFGHGLSYSTFSTYIASAPSTIMIEPNTSMSQPHNNIFESLS 662
+ +PGRTYRFY G ++ FGHGLSYS F+ +A AP + ++ T ++Q N S
Sbjct: 1830ATGYPGRTYRFYKGPVVFPFGHGLSYSRFTHSLALAPKQVSVQFTTPLTQAFTN-----S 1994
Query: 663 DGQAIDISTISCLDLTFFLVIGVKNTGPFNGSHVVLVFWEPPTSELVTGAPIKQLIGFER 722
+A+ +S +C +L + VKN G +G+H +LV+ + P +KQL+ F +
Sbjct: 1995SNKAMKVSHANCDELEVGFHVDVKNEGSMDGAHTLLVYSKAPNG-------VKQLVNFHK 2153
Query: 723 AHVMVGMTEFVTLEIDICQLLSNVDSDGKRKLIIGKHTLLVGSSSETQVRHQID 776
+V G V + + +C LS VD G R++ +G+H L +G + + +D
Sbjct: 2154TYVPAGSKTRVKVGVHVCNHLSAVDEFGVRRIPMGEHELQIGDLKHSILVQTLD 2315
>TC87947 similar to GP|10178060|dbj|BAB11424. beta-xylosidase {Arabidopsis
thaliana}, partial (55%)
Length = 1662
Score = 499 bits (1286), Expect = e-141
Identities = 260/510 (50%), Positives = 353/510 (68%), Gaps = 2/510 (0%)
Frame = +2
Query: 272 DPDLLKGVIRGQWGLDGYIVSDCDSVQVYYESIHYTATPEDAVALALKAGLNMNCGDYLR 331
+ DLLKGVIRG+W L+GYIVSDCDSV+V ++ HYT TPE+A A + +GL+++CG YL
Sbjct: 5 EADLLKGVIRGKWKLNGYIVSDCDSVEVLFKDQHYTKTPEEAAAKTILSGLDLDCGSYLG 184
Query: 332 KYTANAVKLKKVDVSTVDQALVYNYIVLMRLGFFD-NPKSLPFANLGPSDVCTKENQLLA 390
+YT AVK + VD ++++ A+ N+ LMRLGFFD +P P+ NLGP DVCT ENQ LA
Sbjct: 185 QYTGRAVKQRLVDEASINNAVSNNFATLMRLGFFDGDPSKQPYGNLGPKDVCTPENQELA 364
Query: 391 LEAAKQGIVLLENS-GVLPLSKTNIKNLAVIGPNANATTVMISNYAGIPCRYTSPLQGLQ 449
EAA+QGIVLL+NS G LPLS IK+LAVIGPNANAT VMI NY GIPC+YTSPLQGL
Sbjct: 365 REAARQGIVLLKNSPGSLPLSSKAIKSLAVIGPNANATRVMIGNYEGIPCKYTSPLQGLT 544
Query: 450 KYISSVTYAPGCGNVKCGDQSLFAAATKAAAPADAVVLVVGLDQSIEAEGLDRVNLTLPG 509
++ + +YAPGC +V+C + + AA K AA ADA ++VVG + +IEAE LDRVN+ LPG
Sbjct: 545 AFVPT-SYAPGCPDVQCANAQIDDAA-KIAASADATIIVVGANLAIEAESLDRVNILLPG 718
Query: 510 FQEKLVKDVADATKGKVILVIMAAGPIDISFTKSIRNIGGILWVGYPGQAGGDAIAQVIF 569
Q++LV +VA+ +KG VILVIM+ G +D+SF K+ I ILWVGYPG+AGG AIA VIF
Sbjct: 719 QQQQLVNEVANVSKGPVILVIMSGGGMDVSFAKTNDKITSILWVGYPGEAGGAAIADVIF 898
Query: 570 GEYNPGGRSPFTWYPQSYADQVPMTDMNMRANSSRNFPGRTYRFYNGNSLYEFGHGLSYS 629
G YNP GR P TWYPQSY +++PMT+MNMR++ + +PGRTYRFY G +++ FG G+S+
Sbjct: 899 GSYNPSGRLPMTWYPQSYVEKIPMTNMNMRSDPATGYPGRTYRFYKGETVFSFGDGMSFG 1078
Query: 630 TFSTYIASAPSTIMIEPNTSMSQPHNNIFESLSDGQAIDISTISCLDLTFFLVIGVKNTG 689
T I AP + + +++ H SL + +++D++ C +L F + + VKN G
Sbjct: 1079TVEHKIVKAPQLVSV----PLAEDHE--CRSL-ECKSLDVADEHCQNLAFDIHLSVKNMG 1237
Query: 690 PFNGSHVVLVFWEPPTSELVTGAPIKQLIGFERAHVMVGMTEFVTLEIDICQLLSNVDSD 749
+ SH VL+F+ PP V AP K L+GFE+ + V ++D+C LS VD
Sbjct: 1238KMSSSHSVLLFFTPPN---VHNAPQKHLLGFEKVQLAGKSEGMVRFKVDVCNDLSVVDEL 1408
Query: 750 GKRKLIIGKHTLLVGSSSETQVRHQIDISL 779
G RK+ +G H L VG+ ++H + + +
Sbjct: 1409GNRKVPLGDHMLHVGN-----LKHSLSVRI 1483
>TC90739 similar to GP|10178060|dbj|BAB11424. beta-xylosidase {Arabidopsis
thaliana}, partial (39%)
Length = 1017
Score = 358 bits (919), Expect = 4e-99
Identities = 181/332 (54%), Positives = 238/332 (71%), Gaps = 2/332 (0%)
Frame = +2
Query: 315 ALALKAGLNMNCGDYLRKYTANAVKLKKVDVSTVDQALVYNYIVLMRLGFFD-NPKSLPF 373
A ++ AGL++NCG +L +YT AVK + ++++ A+ N+ LMRLGFFD +P +
Sbjct: 5 AKSILAGLDLNCGSFLGRYTEGAVKQGLIGEASINNAVYNNFATLMRLGFFDRDPSKQAY 184
Query: 374 ANLGPSDVCTKENQLLALEAAKQGIVLLEN-SGVLPLSKTNIKNLAVIGPNANATTVMIS 432
NLGP DVCT NQ LA EAA+QGIVLL+N +G LPL+ IK+LAVIGPNANAT MI
Sbjct: 185 GNLGPKDVCTSANQELAREAARQGIVLLKNCAGSLPLNAKAIKSLAVIGPNANATRAMIG 364
Query: 433 NYAGIPCRYTSPLQGLQKYISSVTYAPGCGNVKCGDQSLFAAATKAAAPADAVVLVVGLD 492
NY GIPC+YTSPLQGL + + ++A GC +V+C + +L A K AA ADA V+VVG +
Sbjct: 365 NYEGIPCKYTSPLQGLTALVPT-SFAAGCPDVQCTNAAL-DDAKKIAASADATVIVVGAN 538
Query: 493 QSIEAEGLDRVNLTLPGFQEKLVKDVADATKGKVILVIMAAGPIDISFTKSIRNIGGILW 552
+IEA+ DRVN+ LPG Q++LV +VA+ KG VIL IM+ G +D+SF K+ + I ILW
Sbjct: 539 LAIEAQSHDRVNILLPGQQQQLVTEVANVAKGPVILAIMSGGGMDVSFAKTNKKITSILW 718
Query: 553 VGYPGQAGGDAIAQVIFGEYNPGGRSPFTWYPQSYADQVPMTDMNMRANSSRNFPGRTYR 612
VGYPG+ GG AIA VIFG +NP GR P TWYPQSY D+VPMT+MNMR + + +PGRTYR
Sbjct: 719 VGYPGETGGAAIADVIFGYHNPSGRLPMTWYPQSYVDKVPMTNMNMRPDPATGYPGRTYR 898
Query: 613 FYNGNSLYEFGHGLSYSTFSTYIASAPSTIMI 644
FY G +++ FG G+SYSTF + AP + +
Sbjct: 899 FYKGETVFSFGDGISYSTFEHKLVKAPQLVSV 994
>BE204139 similar to PIR|T52390|T52 beta-1 4-xylosidase [imported] -
Arabidopsis thaliana, partial (20%)
Length = 601
Score = 349 bits (896), Expect(2) = 6e-97
Identities = 172/190 (90%), Positives = 180/190 (94%)
Frame = +1
Query: 423 NANATTVMISNYAGIPCRYTSPLQGLQKYISSVTYAPGCGNVKCGDQSLFAAATKAAAPA 482
NANATTVMISNYAGIPCRY+SPLQGLQKYISSVTYA GC +VKC +Q+LFAAA KAAA A
Sbjct: 1 NANATTVMISNYAGIPCRYSSPLQGLQKYISSVTYARGCSDVKCSNQNLFAAAVKAAASA 180
Query: 483 DAVVLVVGLDQSIEAEGLDRVNLTLPGFQEKLVKDVADATKGKVILVIMAAGPIDISFTK 542
DAVVLVVGLDQSIEAEGLDRVNLTLPGFQEKLVKDVA ATKG +ILVIMAAGPIDISFTK
Sbjct: 181 DAVVLVVGLDQSIEAEGLDRVNLTLPGFQEKLVKDVAAATKGTLILVIMAAGPIDISFTK 360
Query: 543 SIRNIGGILWVGYPGQAGGDAIAQVIFGEYNPGGRSPFTWYPQSYADQVPMTDMNMRANS 602
S+ NIGGILWVGYPGQ GG+AIAQVIFG+YNPGGRSPFTWYPQSY DQVPMTDMNMRANS
Sbjct: 361 SVSNIGGILWVGYPGQDGGNAIAQVIFGDYNPGGRSPFTWYPQSYVDQVPMTDMNMRANS 540
Query: 603 SRNFPGRTYR 612
SRNFPGRTYR
Sbjct: 541 SRNFPGRTYR 570
Score = 24.3 bits (51), Expect(2) = 6e-97
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +2
Query: 613 FYNGNSLYEF 622
FYNG SLYEF
Sbjct: 572 FYNGKSLYEF 601
>TC86821 weakly similar to GP|18086336|gb|AAL57631.1 At1g78060/F28K19_32
{Arabidopsis thaliana}, partial (27%)
Length = 1145
Score = 283 bits (723), Expect = 2e-76
Identities = 154/367 (41%), Positives = 225/367 (60%), Gaps = 3/367 (0%)
Frame = +1
Query: 416 NLAVIGPNANATT-VMISNYAGIPCRYTSPLQGLQKYISSVTYAPGCGN-VKCGDQSLFA 473
++ IGPNAN+++ V++ NY G PC + LQG + Y ++ Y PGC + KC +
Sbjct: 7 SIVFIGPNANSSSQVVLGNYFGRPCNLVTILQGFENYSDNLLYHPGCSDGTKCVSAEI-D 183
Query: 474 AATKAAAPADAVVLVVGLDQSIEAEGLDRVNLTLPGFQEKLVKDVADATKGKVILVIMAA 533
A + A D VVLV+GLDQS E+EG DR +L LPG Q++L+ VA A+K VILV+
Sbjct: 184 RAVEVAKVVDYVVLVMGLDQSQESEGHDRDDLELPGKQQELINSVAKASKRPVILVLFCG 363
Query: 534 GPIDISFTKSIRNIGGILWVGYPGQAGGDAIAQVIFGEYNPGGRSPFTWYPQSYADQVPM 593
GP+DISF K IGGI+W GYPG+ GG A+AQV+FG+YNPGGR P TWYP+ + ++PM
Sbjct: 364 GPVDISFAKVDDKIGGIMWAGYPGELGGRALAQVVFGDYNPGGRLPMTWYPKDFI-KIPM 540
Query: 594 TDMNMRANSSRNFPGRTYRFYNGNSLYEFGHGLSYSTFS-TYIASAPSTIMIEPNTSMSQ 652
TDM MRA+ S +PGRTYRFY G +YEFG+GLSYS +S +I+ + + I +T+ S
Sbjct: 541 TDMRMRADPSSGYPGRTYRFYTGPKVYEFGYGLSYSNYSYNFISVKNNNLHINQSTTYSI 720
Query: 653 PHNNIFESLSDGQAIDISTISCLDLTFFLVIGVKNTGPFNGSHVVLVFWEPPTSELVTGA 712
+ +++ ++ +C ++ + +G+ NTG G H VL+F +P G
Sbjct: 721 LEKS--QTIHYKLVSELGKKACKTMSISVTLGITNTGSMAGKHPVLLFVKPKKGR--NGN 888
Query: 713 PIKQLIGFERAHVMVGMTEFVTLEIDICQLLSNVDSDGKRKLIIGKHTLLVGSSSETQVR 772
P+KQL+GFE V G V E+ +C+ LS + G + + G + LVG ++
Sbjct: 889 PVKQLVGFESVTVEGGGKGEVGFEVSVCEHLSRANESGVKVIEEGGYLFLVG-----ELE 1053
Query: 773 HQIDISL 779
+ I+I+L
Sbjct: 1054YSINITL 1074
>TC91323 similar to GP|18086336|gb|AAL57631.1 At1g78060/F28K19_32
{Arabidopsis thaliana}, partial (25%)
Length = 720
Score = 225 bits (573), Expect(2) = 9e-69
Identities = 109/186 (58%), Positives = 136/186 (72%), Gaps = 1/186 (0%)
Frame = +3
Query: 6 LFLSLFLSLLVLLPILTSSQKHACNKASPKTSNFPFCDTTLSYEARAKDLVSRLTLQEKA 65
LFL+L S+L LP AC+ ++P T ++PFC+ L R KDLVSRLTL EK
Sbjct: 69 LFLTLTYSVLAQLP------PFACDYSNPSTRSYPFCNPKLPITQRTKDLVSRLTLDEKL 230
Query: 66 QQLVNPSSGIARLGVPSYEWWSEALHGVSNLGPGTRFNRTVPGATSFPAVILSAASFNAT 125
QLVN + I RLG+P+YEWWSEALHG+ N+G G FN ++ ATSFP VIL+AASF++
Sbjct: 231 AQLVNSAPPIPRLGIPAYEWWSEALHGIGNVGRGIFFNGSITSATSFPQVILTAASFDSH 410
Query: 126 LWYNMGQVVSTEARAMYNVDLA-GLTFWSPNVNVFRDPRWGRGQETPGEDPLVVSRYAVK 184
LWY +GQ + EARA+YN A G+TFW+PN+N+FRDPRWGRGQET GEDP++ S YAV
Sbjct: 411 LWYRIGQAIGVEARAIYNGGQAMGMTFWAPNINIFRDPRWGRGQETAGEDPMMTSNYAVS 590
Query: 185 YVRGLQ 190
YVRGLQ
Sbjct: 591 YVRGLQ 608
Score = 54.7 bits (130), Expect(2) = 9e-69
Identities = 20/27 (74%), Positives = 24/27 (88%)
Frame = +1
Query: 201 DRLKVSSCCKHYTAYDVDNWKGVDRFH 227
D K S+CCKH+TAYD+DNWKGV+RFH
Sbjct: 640 DTFKASACCKHFTAYDLDNWKGVNRFH 720
>AW587289 similar to GP|14194121|gb At1g02640/T14P4_11 {Arabidopsis
thaliana}, partial (26%)
Length = 625
Score = 257 bits (657), Expect = 1e-68
Identities = 123/211 (58%), Positives = 156/211 (73%), Gaps = 1/211 (0%)
Frame = +2
Query: 173 EDPLVVSRYAVKYVRGLQDVEDEESIKADRLKVSSCCKHYTAYDVDNWKGVDRFHFDAKV 232
EDP++ RYA YV+GLQ + ++LKV++CCKH+TAYDVDNW GVDRFHF+A V
Sbjct: 8 EDPVLAGRYAASYVKGLQGTD------GNKLKVAACCKHFTAYDVDNWNGVDRFHFNALV 169
Query: 233 TKQDLEDTYQPPFKSCVVEGHVSSVMCSYNRVNGIPTCADPDLLKGVIRGQWGLDGYIVS 292
+KQD+EDT+ PF+ CV EG V+SVMCSYN+VNG+PTCADP+LLK +RG WGLDGYIVS
Sbjct: 170 SKQDIEDTFDVPFRMCVKEGKVASVMCSYNQVNGVPTCADPNLLKKTVRGVWGLDGYIVS 349
Query: 293 DCDSVQVYYESIHYTATPEDAVALALKAGLNMNCGDYLRKYTANAVKLKKVDVSTVDQAL 352
DCDSV V Y S HYT+TPE+A A A+KAGL+++CG +L +T +AVK + + V+ AL
Sbjct: 350 DCDSVGVLYNSQHYTSTPEEAAADAIKAGLDLDCGPFLGVHTQDAVKKGLLTEADVNNAL 529
Query: 353 VYNYIVLMRLGFFD-NPKSLPFANLGPSDVC 382
V V MRLG FD P + + L P DVC
Sbjct: 530 VNTLKVQMRLGMFDGEPSAQAYGRLSPKDVC 622
>AW694633 similar to GP|9759419|dbj xylosidase {Arabidopsis thaliana},
partial (21%)
Length = 592
Score = 193 bits (490), Expect(3) = 6e-51
Identities = 92/159 (57%), Positives = 113/159 (70%), Gaps = 3/159 (1%)
Frame = +3
Query: 12 LSLLVLLPILTSSQKH---ACNKASPKTSNFPFCDTTLSYEARAKDLVSRLTLQEKAQQL 68
L +V L +L SS+ AC+ + T+NFPFC +L R DL+ RLTLQEK L
Sbjct: 6 LITIVFLLLLMSSEARDPFACDPKNTSTNNFPFCKASLPIPTRVNDLIGRLTLQEKVSML 185
Query: 69 VNPSSGIARLGVPSYEWWSEALHGVSNLGPGTRFNRTVPGATSFPAVILSAASFNATLWY 128
VN ++ + R+G+ YEWWSEALHGVSN+GPGT+F P ATSFP VI + ASFNA+LW
Sbjct: 186 VNNAAAVPRVGIKGYEWWSEALHGVSNVGPGTKFAGQFPAATSFPQVITTVASFNASLWE 365
Query: 129 NMGQVVSTEARAMYNVDLAGLTFWSPNVNVFRDPRWGRG 167
+G+V S EARAMYN AGLT+WSPNVN+FRDPRWGRG
Sbjct: 366 AIGRVASDEARAMYNGGTAGLTYWSPNVNIFRDPRWGRG 482
Score = 25.8 bits (55), Expect(3) = 6e-51
Identities = 9/11 (81%), Positives = 11/11 (99%)
Frame = +1
Query: 167 GQETPGEDPLV 177
GQETPGEDP++
Sbjct: 481 GQETPGEDPIL 513
Score = 21.9 bits (45), Expect(3) = 6e-51
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +2
Query: 180 RYAVKYVRGLQDVE 193
+YA YVRGLQ +
Sbjct: 521 KYAASYVRGLQGTD 562
>BF635270 similar to GP|18086336|gb At1g78060/F28K19_32 {Arabidopsis
thaliana}, partial (19%)
Length = 618
Score = 159 bits (402), Expect(2) = 2e-42
Identities = 83/178 (46%), Positives = 117/178 (65%), Gaps = 3/178 (1%)
Frame = +1
Query: 283 QWGLDGYIVSDCDSVQVYYESIHYTATPEDAVALALKAGLNMNCGDYLRKYTANAVKLKK 342
+W +GYI SDCD+V+ YE Y TPED VA L+AG+++ CG+Y+ K+ +AV KK
Sbjct: 73 KWNFNGYIASDCDAVRFIYEKQGYAKTPEDVVADVLRAGMDLECGNYMTKHAKSAVLQKK 252
Query: 343 VDVSTVDQALVYNYIVLMRLGFFD-NPKSLPFANLGPSDVCTKENQLLALEAAKQGIVLL 401
+ +S +D+AL + + +RLG FD NP L + +GP+ VC+KEN LALEAA+ GIVLL
Sbjct: 253 IPISQIDRALHNLFTIRIRLGLFDGNPTKLQYGRIGPNQVCSKENLDLALEAARSGIVLL 432
Query: 402 EN-SGVLPLSKTNIKNLAVIGPNAN-ATTVMISNYAGIPCRYTSPLQGLQKYISSVTY 457
+N + +LPL + N L VIGPNAN ++ V++ NY G C+ S L+G Y S Y
Sbjct: 433 KNTASILPLPRVN--TLGVIGPNANKSSIVLLGNYIGPXCKNVSILKGFYTYASQTHY 600
Score = 32.7 bits (73), Expect(2) = 2e-42
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +3
Query: 260 SYNRVNGIPTCADPDLLKGVIR 281
+YNRVNG+P CAD +LL R
Sbjct: 3 AYNRVNGVPNCADYNLLTNTAR 68
>AW587061 similar to PIR|T49983|T49 beta-xylosidase-like protein -
Arabidopsis thaliana, partial (22%)
Length = 611
Score = 166 bits (420), Expect = 3e-41
Identities = 95/193 (49%), Positives = 126/193 (65%), Gaps = 2/193 (1%)
Frame = +1
Query: 348 VDQALVYNYIVLMRLGFFD-NPKSLPFANLGPSDVCTKENQLLALEAAKQGIVLLENSG- 405
+D+AL + V MRLG F+ +P+ F LGP DVCT E++ LALEAA+QGIVLL+N
Sbjct: 34 LDRALFNLFSVQMRLGLFNGDPEKGKFGKLGPQDVCTPEHKKLALEAARQGIVLLKNDNK 213
Query: 406 VLPLSKTNIKNLAVIGPNANATTVMISNYAGIPCRYTSPLQGLQKYISSVTYAPGCGNVK 465
LPL K + +LA+IGP A T+ + Y+GIPC S GL++Y+ +++YA GC +VK
Sbjct: 214 FLPLDKKDRVSLAIIGPMAT-TSELGGGYSGIPCSPRSLYDGLKEYVKTISYAFGCSDVK 390
Query: 466 CGDQSLFAAATKAAAPADAVVLVVGLDQSIEAEGLDRVNLTLPGFQEKLVKDVADATKGK 525
C FA A A AD VV+V GLD ++E E LDRV+L LPG Q LV VA A+K
Sbjct: 391 CDSDDGFAVAIDIAKQADFVVIVAGLDTTLETEDLDRVSLLLPGKQMDLVSRVAAASKRP 570
Query: 526 VILVIMAAGPIDI 538
VILV+ GP+D+
Sbjct: 571 VILVLTGGGPLDV 609
>TC76588 similar to GP|9759419|dbj|BAB09906.1 xylosidase {Arabidopsis
thaliana}, partial (14%)
Length = 830
Score = 159 bits (403), Expect = 3e-39
Identities = 78/136 (57%), Positives = 97/136 (70%)
Frame = +1
Query: 504 NLTLPGFQEKLVKDVADATKGKVILVIMAAGPIDISFTKSIRNIGGILWVGYPGQAGGDA 563
NL++ +EK VA A +G VILV+M+ GPID++F K+ I ILWVGYPGQ+GG A
Sbjct: 424 NLSM*TCEEK--SRVARAARGPVILVLMSGGPIDVTFAKNDPKISAILWVGYPGQSGGTA 597
Query: 564 IAQVIFGEYNPGGRSPFTWYPQSYADQVPMTDMNMRANSSRNFPGRTYRFYNGNSLYEFG 623
IA VIFG NP GR P TWYPQ Y +VPMT+M+MRAN + +PGRTYRFY G ++ FG
Sbjct: 598 IADVIFGRTNPSGRLPNTWYPQDYVRKVPMTNMDMRANPATGYPGRTYRFYKGPVVFPFG 777
Query: 624 HGLSYSTFSTYIASAP 639
HGLSYS + +A AP
Sbjct: 778 HGLSYSRITHSLALAP 825
>TC84922 similar to GP|14194121|gb|AAK56255.1 At1g02640/T14P4_11
{Arabidopsis thaliana}, partial (19%)
Length = 818
Score = 104 bits (260), Expect = 1e-22
Identities = 61/178 (34%), Positives = 95/178 (53%)
Frame = +2
Query: 609 RTYRFYNGNSLYEFGHGLSYSTFSTYIASAPSTIMIEPNTSMSQPHNNIFESLSDGQAID 668
RTYRFY G +Y FGHGL+Y+ F ++SAP+ + + + + NI +AI
Sbjct: 2 RTYRFYKGPVVYPFGHGLTYTHFFHELSSAPTVVSVPVHGHRHGNNTNI-----SNKAIR 166
Query: 669 ISTISCLDLTFFLVIGVKNTGPFNGSHVVLVFWEPPTSELVTGAPIKQLIGFERAHVMVG 728
++ C L+ L + VKN G +G+H +LVF PP P K L+ FE+ HV
Sbjct: 167 VTHARCGKLSIALHVDVKNVGSRDGTHTLLVFSAPPNGGN-HWVPQKSLVAFEKVHVPAK 343
Query: 729 MTEFVTLEIDICQLLSNVDSDGKRKLIIGKHTLLVGSSSETQVRHQIDISLSGNGMEK 786
+ V + I +C+LLS VD G R++ +G+H+L +G V+H + + G+ K
Sbjct: 344 TKQRVRVNIHVCKLLSVVDKSGIRRIPMGEHSLHIG-----DVKHSVSLQAEALGIIK 502
>AW697240 similar to GP|14194121|gb| At1g02640/T14P4_11 {Arabidopsis
thaliana}, partial (8%)
Length = 337
Score = 103 bits (257), Expect = 3e-22
Identities = 54/111 (48%), Positives = 68/111 (60%), Gaps = 4/111 (3%)
Frame = +2
Query: 3 SNLLFLSLFLSLLVLLPILTSS----QKHACNKASPKTSNFPFCDTTLSYEARAKDLVSR 58
S+ LS ++L +LL L SS AC+ T N PFC+ L+ R KDL+ R
Sbjct: 11 SSTFSLSPLITLFILL--LQSSCDARDSFACDAKDAATKNLPFCNVKLAIPERVKDLIGR 184
Query: 59 LTLQEKAQQLVNPSSGIARLGVPSYEWWSEALHGVSNLGPGTRFNRTVPGA 109
LT+QEK LVN + + R+G+ SYEWWSEALHGVSN+GPGTRF P A
Sbjct: 185 LTMQEKVNLLVNNAPAVPRVGMKSYEWWSEALHGVSNVGPGTRFGGVFPAA 337
>AW691903 similar to GP|14194121|gb| At1g02640/T14P4_11 {Arabidopsis
thaliana}, partial (11%)
Length = 275
Score = 94.0 bits (232), Expect = 2e-19
Identities = 47/91 (51%), Positives = 64/91 (69%), Gaps = 1/91 (1%)
Frame = +2
Query: 292 SDCDSVQVYYESIHYTATPEDAVALALKAGLNMNCGDYLRKYTANAVKLKKVDVSTVDQA 351
SDCDSV V+Y + HYT+TPE+A A A+KAGL+++CG +L ++T NAVK + + V+ A
Sbjct: 2 SDCDSVGVFYTNQHYTSTPEEAAADAIKAGLDLDCGPFLAQHTQNAVKKGLLTETDVNGA 181
Query: 352 LVYNYIVLMRLGFFD-NPKSLPFANLGPSDV 381
L V MRLG FD P + P+ NLGP+DV
Sbjct: 182 LANTLTVQMRLGMFDGEPSAQPYGNLGPTDV 274
>TC92777 weakly similar to PIR|T49928|T49928 beta-glucosidase-like protein -
Arabidopsis thaliana, partial (17%)
Length = 526
Score = 68.2 bits (165), Expect = 1e-11
Identities = 38/118 (32%), Positives = 62/118 (52%)
Frame = +3
Query: 665 QAIDISTISCLDLTFFLVIGVKNTGPFNGSHVVLVFWEPPTSELVTGAPIKQLIGFERAH 724
+++D+ C +L F + + +KN G + S V +F PP V AP K L+ FE+ H
Sbjct: 33 KSLDVVGEHCQNLVFDIHLRIKNKGKMSSSQTVFLFSTPPA---VHNAPQKHLLAFEKVH 203
Query: 725 VMVGMTEFVTLEIDICQLLSNVDSDGKRKLIIGKHTLLVGSSSETQVRHQIDISLSGN 782
V+ ++D+C+ LS VD G RK+ +GKH L VG ++H + + + N
Sbjct: 204 FTGKSEALVSFKVDVCKDLSVVDELGNRKVALGKHMLHVG-----DLKHPLSVMI*SN 362
>TC86822 weakly similar to GP|18086336|gb|AAL57631.1 At1g78060/F28K19_32
{Arabidopsis thaliana}, partial (8%)
Length = 704
Score = 63.2 bits (152), Expect = 4e-10
Identities = 37/122 (30%), Positives = 61/122 (49%), Gaps = 3/122 (2%)
Frame = +2
Query: 646 PNTSMSQP---HNNIFESLSDGQAIDISTISCLDLTFFLVIGVKNTGPFNGSHVVLVFWE 702
P TS +QP ++ + + ++ +C ++ + +G+ NTG G H VL+F +
Sbjct: 92 PFTSTNQPLIRYSKTLKQIYYKLVSELGEETCKTMSISVTLGITNTGSMAGKHPVLLFVK 271
Query: 703 PPTSELVTGAPIKQLIGFERAHVMVGMTEFVTLEIDICQLLSNVDSDGKRKLIIGKHTLL 762
P G P+KQL+GFE V G V E+ +C+ LS + G + + G H L+
Sbjct: 272 PKKGR--NGNPVKQLVGFESVTVEGGGKGEVGFEVSVCEHLSRANESGVKVIEEGGHLLV 445
Query: 763 VG 764
VG
Sbjct: 446 VG 451
Score = 35.0 bits (79), Expect = 0.11
Identities = 18/46 (39%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +1
Query: 612 RFYNGNSLYEFGHGLSYSTFS-TYIASAPSTIMIEPNTSMSQPHNN 656
R Y G +YEFG+G SYS +S +I+ +T+ I +T+ S N+
Sbjct: 1 RXYTGPKVYEFGYGXSYSNYSYNFISVKNNTLHINQSTTHSILENS 138
>TC93180 similar to PIR|T51283|T51283 glucan 1 3-beta-glucosidase (EC
3.2.1.58) [imported] - common tobacco, partial (41%)
Length = 798
Score = 62.4 bits (150), Expect = 7e-10
Identities = 67/263 (25%), Positives = 112/263 (42%), Gaps = 39/263 (14%)
Frame = +1
Query: 43 DTTLSYEARAKDLVSRLTLQEKAQQLVNPSSGIARLGVPSYEW----------------- 85
D+ R KDL+ R+TL+EK Q+V +A V + +
Sbjct: 19 DSKHPLNTRIKDLLDRMTLEEKIGQMVQIERNVASAEVMNNYFIGSVLSGGGSVPKPKAT 198
Query: 86 ---WSEALHGVSNLGPGTRF-------------NRTVPGATSFPAVILSAASFNATLWYN 129
W + ++ TR N V AT FP + A+ + L
Sbjct: 199 AKDWVDMINEFQKGALSTRLGIPMIYGIDAVHGNNNVYKATIFPHNVGLGATRDPQLVKK 378
Query: 130 MGQVVSTEARAMYNVDLAGLTF-WSPNVNVFRDPRWGRGQETPGEDPLVVSRYAVKYVRG 188
+G+ + E+RA G+ + ++P + V RDPRWGR E+ ED VV + + + G
Sbjct: 379 IGEATALESRA------TGIPYVFAPCIAVCRDPRWGRCYESYSEDHKVV-QAMTEIIPG 537
Query: 189 LQ-----DVEDEESIKADRLKVSSCCKHYTAYDVDNWKGVDRFHFDAKVTKQDLEDTYQP 243
LQ + + A KV++C KH+ D KG++ + A + +L + P
Sbjct: 538 LQSDLPANWSNGVPYVAGNKKVAACAKHFVG-DGGTTKGINEDNTVA--NRHELFSIHMP 708
Query: 244 PFKSCVVEGHVSSVMCSYNRVNG 266
+ + +++G V +VM SY+ NG
Sbjct: 709 AYYNSIIKG-VLTVMVSYSSWNG 774
>AI974314 weakly similar to GP|18086336|gb| At1g78060/F28K19_32 {Arabidopsis
thaliana}, partial (8%)
Length = 393
Score = 59.7 bits (143), Expect = 4e-09
Identities = 34/107 (31%), Positives = 56/107 (51%)
Frame = -3
Query: 673 SCLDLTFFLVIGVKNTGPFNGSHVVLVFWEPPTSELVTGAPIKQLIGFERAHVMVGMTEF 732
+C ++ + +G+ NTG G H VL+F +P G P+KQL+GFE V G
Sbjct: 373 ACKTMSISVTLGITNTGSMAGKHPVLLFVKPKKGR--NGNPVKQLVGFESVTVEGGGKGE 200
Query: 733 VTLEIDICQLLSNVDSDGKRKLIIGKHTLLVGSSSETQVRHQIDISL 779
V E+ +C+ LS + G + + G + LVG ++ + I+I+L
Sbjct: 199 VGFEVSVCEHLSRANESGVKVIEEGGYLFLVG-----ELEYSINITL 74
>TC82465 similar to PIR|T45637|T45637 beta-D-glucan exohydrolase-like
protein - Arabidopsis thaliana, partial (42%)
Length = 854
Score = 50.8 bits (120), Expect = 2e-06
Identities = 51/176 (28%), Positives = 75/176 (41%), Gaps = 34/176 (19%)
Frame = +2
Query: 49 EARAKDLVSRLTLQEKAQQLVNPSSGIAR------LGVPSY--------------EWWSE 88
EAR KDL+SR+TL EK Q++ +A L + S W++
Sbjct: 98 EARIKDLLSRMTLNEKIGQMIQIERTVATPSVIKDLSIGSILSSGGSTPFDNALSSDWAD 277
Query: 89 ALHGVSNLGPGTRF-------------NRTVPGATSFPAVILSAASFNATLWYNMGQVVS 135
+ G +R N +V GAT FP + A+ +A L +G +
Sbjct: 278 MVDGYQKSALESRLGIPLIYGIDAVHGNNSVYGATIFPHNVGLGATRDADLVRRIGAATA 457
Query: 136 TEARAMYNVDLAGLTF-WSPNVNVFRDPRWGRGQETPGEDPLVVSRYAVKYVRGLQ 190
E +A +G+ + ++P V V +DPRWGR E ED +V R V GLQ
Sbjct: 458 LEVKA------SGIHYNFAPCVAVCKDPRWGRCYECYSEDTEIV-RKMTSIVSGLQ 604
>TC82424 similar to PIR|T51283|T51283 glucan 1 3-beta-glucosidase (EC
3.2.1.58) [imported] - common tobacco, partial (45%)
Length = 962
Score = 45.4 bits (106), Expect = 8e-05
Identities = 33/108 (30%), Positives = 54/108 (49%)
Frame = +3
Query: 486 VLVVGLDQSIEAEGLDRVNLTLPGFQEKLVKDVADATKGKVILVIMAAGPIDISFTKSIR 545
+++VG E G D +NLT+ G + +V K ++V+++ PI I +
Sbjct: 498 IVIVGETPYAETNG-DSLNLTISGQGYGTINNVCGVVK--CVVVLISGRPIVIQ--PYLE 662
Query: 546 NIGGILWVGYPGQAGGDAIAQVIFGEYNPGGRSPFTWYPQSYADQVPM 593
I G++ PG G +A V+FG+Y G+ P TW+ DQ+PM
Sbjct: 663 KIEGLVAGWLPGSEGS-GVADVLFGDYGFTGKLPRTWF--KTVDQLPM 797
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,273,068
Number of Sequences: 36976
Number of extensions: 314631
Number of successful extensions: 1704
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 1651
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1672
length of query: 794
length of database: 9,014,727
effective HSP length: 104
effective length of query: 690
effective length of database: 5,169,223
effective search space: 3566763870
effective search space used: 3566763870
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)
Lotus: description of TM0218.19