TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0215b.3
         (66 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC76867 similar to GP|2909420|emb|CAA12026.1 LEA protein {Cicer ...    41  8e-05
TC76866 similar to GP|2909420|emb|CAA12026.1 LEA protein {Cicer ...    41  8e-05
BI271791 homologue to SP|Q8UVR5|BA1A_ ATP-utilizing chromatin as...    39  5e-04
AL387887 similar to GP|2909420|emb| LEA protein {Cicer arietinum...    32  0.062
TC81523 weakly similar to PIR|I51618|I51618 nucleolar phosphopro...    25  4.5
BG450115                                                               24  9.9

>TC76867 similar to GP|2909420|emb|CAA12026.1 LEA protein {Cicer arietinum},
           partial (85%)
          Length = 828

 Score = 41.2 bits (95), Expect = 8e-05
 Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
 Frame = +1

Query: 4   SQNLSHQAGQATGQAQEKASNMMGNARNAAQSAQQSC----QEAGQQMKAKAQGAADAVK 59
           +Q    +    TGQA++K   M    +  AQS + +     Q+ G+++K  AQGA +AVK
Sbjct: 319 AQATKDKTQDTTGQARDKGYEMGQATKETAQSGKDNSAGFLQQTGEKVKGMAQGATEAVK 498

Query: 60  SAIGAN 65
           + +G N
Sbjct: 499 NTLGMN 516


>TC76866 similar to GP|2909420|emb|CAA12026.1 LEA protein {Cicer arietinum},
           partial (85%)
          Length = 781

 Score = 41.2 bits (95), Expect = 8e-05
 Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
 Frame = +2

Query: 4   SQNLSHQAGQATGQAQEKASNMMGNARNAAQSAQQSC----QEAGQQMKAKAQGAADAVK 59
           +Q    +    TGQA++K   M    +  AQS + +     Q+ G+++K  AQGA +AVK
Sbjct: 299 AQATKDKTQDTTGQARDKGYEMGQATKETAQSGKDNSAGFLQQTGEKVKGMAQGATEAVK 478

Query: 60  SAIGAN 65
           + +G N
Sbjct: 479 NTLGMN 496


>BI271791 homologue to SP|Q8UVR5|BA1A_ ATP-utilizing chromatin assembly and
           remodely factor 1 (xACF1) (Fragment). [African clawed
           frog], partial (2%)
          Length = 689

 Score = 38.5 bits (88), Expect = 5e-04
 Identities = 21/63 (33%), Positives = 34/63 (53%)
 Frame = +3

Query: 4   SQNLSHQAGQATGQAQEKASNMMGNARNAAQSAQQSCQEAGQQMKAKAQGAADAVKSAIG 63
           +QN++ +A Q   +A +   N    A NAA S +Q+C +   +++AKA  AA+ VK    
Sbjct: 351 TQNIAEKAKQTMQEAWDSTKN---KANNAADSVKQTCADGKAEVEAKADRAAENVKQTCA 521

Query: 64  ANK 66
             K
Sbjct: 522 DGK 530



 Score = 37.0 bits (84), Expect = 0.001
 Identities = 21/64 (32%), Positives = 32/64 (49%), Gaps = 5/64 (7%)
 Frame = +3

Query: 8   SHQAGQATG-----QAQEKASNMMGNARNAAQSAQQSCQEAGQQMKAKAQGAADAVKSAI 62
           +H+   +TG     Q ++ A+      +N A+ A+Q+ QEA    K KA  AAD+VK   
Sbjct: 273 AHEKAYSTGHHVANQTKDAANKASAATQNIAEKAKQTMQEAWDSTKNKANNAADSVKQTC 452

Query: 63  GANK 66
              K
Sbjct: 453 ADGK 464


>AL387887 similar to GP|2909420|emb| LEA protein {Cicer arietinum}, partial
           (30%)
          Length = 494

 Score = 31.6 bits (70), Expect = 0.062
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = +2

Query: 40  CQEAGQQMKAKAQGAADAVKSAIGAN 65
           C   G+++K  AQGA +AVK+ +G N
Sbjct: 122 CNXTGEKVKGMAQGATEAVKNTLGMN 199


>TC81523 weakly similar to PIR|I51618|I51618 nucleolar phosphoprotein -
           African clawed frog, partial (2%)
          Length = 416

 Score = 25.4 bits (54), Expect = 4.5
 Identities = 16/48 (33%), Positives = 26/48 (53%)
 Frame = +3

Query: 12  GQATGQAQEKASNMMGNARNAAQSAQQSCQEAGQQMKAKAQGAADAVK 59
           GQA  +A  KAS+    +++A++ A Q  Q+     K K +G+  A K
Sbjct: 84  GQAKKEATPKASDKGQASKSASKKAHQKPQDLN---KKKGKGSKPAAK 218


>BG450115 
          Length = 664

 Score = 24.3 bits (51), Expect = 9.9
 Identities = 15/52 (28%), Positives = 26/52 (49%)
 Frame = +2

Query: 7   LSHQAGQATGQAQEKASNMMGNARNAAQSAQQSCQEAGQQMKAKAQGAADAV 58
           L  Q  +   + +EK    +GN    A +A++  ++     KAKA G A++V
Sbjct: 176 LGEQVSKNVAETKEKLH--IGNKHGEATAAKEHHKQNEDVHKAKAAGYAESV 325


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.300    0.108    0.271 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 826,248
Number of Sequences: 36976
Number of extensions: 3623
Number of successful extensions: 20
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of query: 66
length of database: 9,014,727
effective HSP length: 42
effective length of query: 24
effective length of database: 7,461,735
effective search space: 179081640
effective search space used: 179081640
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 17 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.8 bits)
S2: 51 (24.3 bits)