BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0214.3
(605 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF644046 50 2e-06
BE205177 weakly similar to GP|9280691|gb| F2E2.13 {Arabidopsis t... 38 0.010
TC87237 similar to GP|160409|gb|AAA29651.1|| mature-parasite-inf... 37 0.017
TC86560 similar to GP|8843737|dbj|BAA97285.1 myosin heavy chain-... 37 0.022
TC86844 similar to GP|16797791|gb|AAL27150.1 bZIP transcription ... 37 0.022
TC78777 similar to PIR|T10985|T10985 regulator protein ROM2 - ki... 35 0.064
TC92524 similar to GP|19698943|gb|AAL91207.1 unknown protein {Ar... 35 0.11
TC92853 similar to GP|20268748|gb|AAM14077.1 unknown protein {Ar... 34 0.14
TC89797 GP|13775543|gb|AAK39351.1 Hypothetical protein Y73B3A.17... 33 0.24
TC88472 similar to GP|19423958|gb|AAL87269.1 unknown protein {Ar... 33 0.24
TC86621 similar to PIR|F84664|F84664 hypothetical protein At2g26... 33 0.24
TC86622 weakly similar to GP|20197623|gb|AAM15156.1 putative myo... 33 0.24
TC83004 similar to PIR|T10985|T10985 regulator protein ROM2 - ki... 33 0.24
BI310451 weakly similar to GP|7339698|dbj| Similar to Caenorhabd... 33 0.32
AW688848 homologue to PIR|T46027|T4 hypothetical protein T10K17.... 33 0.41
TC79702 MtN14 33 0.41
TC87542 weakly similar to GP|22136436|gb|AAM91296.1 putative pro... 32 0.70
TC82286 weakly similar to PIR|B96544|B96544 hypothetical protein... 32 0.70
BI310236 similar to SP|Q9UZC8|RA50_ DNA double-strand break repa... 32 0.92
AL388248 weakly similar to GP|6062758|gb|A NADH dehydrogenase su... 32 0.92
>BF644046
Length = 597
Score = 50.4 bits (119), Expect = 2e-06
Identities = 23/55 (41%), Positives = 34/55 (61%)
Frame = +3
Query: 82 HTYFFENIFSDLKYKLPLSDFTCTVLTLLNVSPTQLHCNSWAYLRAFELLCQLLG 136
H Y F +F D+ +K P ++F C L LNV+ +QLH N A++ FE+ C+ LG
Sbjct: 9 HMYSF--VFEDIGFKFPFTNFECDFLKALNVASSQLHPNCCAFMCGFEISCESLG 167
>BE205177 weakly similar to GP|9280691|gb| F2E2.13 {Arabidopsis thaliana},
partial (2%)
Length = 634
Score = 38.1 bits (87), Expect = 0.010
Identities = 38/161 (23%), Positives = 67/161 (41%), Gaps = 13/161 (8%)
Frame = +1
Query: 402 LKEACQAIMTKGLEIAAISKMVDLETAGFDGINSAKQLEEKEREILKMKATMKL------ 455
L EA I E +S+ ++L + + +L+ +IL +K ++
Sbjct: 13 LLEASLNIQATEDEKFQLSRQLELSNQSNESL--VLRLQNAMSDILSLKEYKEICIAKSN 186
Query: 456 -LDSSNKVSEKKAADLALENERLKKHAEALSATQKVKEGELVKSQAEITELNSANSELKN 514
L N++ E DL EN L + + V AE +ELN+ +
Sbjct: 187 DLTHRNQILEANLKDLGHENNLLTHKINEVEVLLTDYRSKYVACSAENSELNNLLKKESL 366
Query: 515 ENSKLHSEISELKNSIL------DQLEAGFSKAKEQILFLN 549
EN LH EIS L+ I+ D L++ + + +++FL+
Sbjct: 367 ENDHLHDEISTLQKEIISFRTKFDVLDSMNNDLQNKVMFLS 489
>TC87237 similar to GP|160409|gb|AAA29651.1|| mature-parasite-infected
erythrocyte surface antigen {Plasmodium falciparum},
partial (2%)
Length = 2007
Score = 37.4 bits (85), Expect = 0.017
Identities = 39/170 (22%), Positives = 73/170 (42%), Gaps = 21/170 (12%)
Frame = +1
Query: 457 DSSNKVSEKKAADLALENERLKKHAEALSATQKVKEGELVKSQAEIT--ELNSANSELKN 514
+ S + E LENE K ++ +++K+GE ++ + E E S +N
Sbjct: 79 EESKETGESSEEKSHLENEENKDEEKSKQENEEIKDGEKIQQENEENKDEEKSQQENEEN 258
Query: 515 ENSKLHSEISELKNSILDQLEAG---FSKAKEQILFLNPQVS-----------INLAGSN 560
++ + + +ELK + + E G K+K++ N + S N GS+
Sbjct: 259 KDEEKSQQENELKKNEGGEKETGEITEEKSKQE----NEETSETNSKDKENEESNQNGSD 426
Query: 561 PYARI-----VDGKLINPDTGDEEEEEEYEGDKNEEDGNANNNEGEGENH 605
++ D K +T E E+ E DK +ED +++N +GE +
Sbjct: 427 AKEQVGENHEQDSKQGTEETNGTEGGEKEEHDKIKEDTSSDNQVQDGEKN 576
Score = 35.4 bits (80), Expect = 0.064
Identities = 35/171 (20%), Positives = 74/171 (42%), Gaps = 5/171 (2%)
Frame = +1
Query: 434 NSAKQLEEKEREILKM----KATMKLLDSSNKVSEKKAADL-ALENERLKKHAEALSATQ 488
N ++ ++E E+ K K T ++ + +K ++ ++ + + E + + A +
Sbjct: 256 NKDEEKSQQENELKKNEGGEKETGEITEEKSKQENEETSETNSKDKENEESNQNGSDAKE 435
Query: 489 KVKEGELVKSQAEITELNSANSELKNENSKLHSEISELKNSILDQLEAGFSKAKEQILFL 548
+V E S+ E N K E+ K+ + S N + D + ++A+E+
Sbjct: 436 QVGENHEQDSKQGTEETNGTEGGEKEEHDKIKEDTSS-DNQVQDGEKN--NEAREE---- 594
Query: 549 NPQVSINLAGSNPYARIVDGKLINPDTGDEEEEEEYEGDKNEEDGNANNNE 599
N +G N + +VD K EE+ ++ E ++ E + N+NE
Sbjct: 595 ------NYSGDNASSAVVDNKSQESSNKTEEQFDKKEKNEFELESQKNSNE 729
>TC86560 similar to GP|8843737|dbj|BAA97285.1 myosin heavy chain-like
{Arabidopsis thaliana}, partial (28%)
Length = 2450
Score = 37.0 bits (84), Expect = 0.022
Identities = 66/313 (21%), Positives = 120/313 (38%), Gaps = 13/313 (4%)
Frame = +2
Query: 253 ENKLGEYVAKMTRLSDD-DILRFRREQQA---AREKRNPAKTLIDADASHSGTESNRPQK 308
EN + E +++ LS + ++ EQ ++ A L + DA ++ Q
Sbjct: 881 ENAMKENTERVSELSKEISAVKESIEQTKLAYVESQQQQALVLTEKDALRQSYKATLEQS 1060
Query: 309 KKK-----RNETPEPTKGKDASQPSMEKFMMKNNPQHLAHQSGSSSAPPPTWKSVLKEFE 363
KKK + PE TK +A + + M + H ++ SS K+V E +
Sbjct: 1061 KKKLLALKKEFNPEITKSLEAQ---LAETMNEIAALHTELENKRSSDLDSV-KTVTSELD 1228
Query: 364 ELTSEEVTSLWDSKIDFNALVETNLVFKADQEKIKR----IGLKEACQAIMTKGLEIAAI 419
E + + D + +LVET K + E +K+ + KE+ L +
Sbjct: 1229 G-AKESLQKVVDEENTLRSLVET---LKVELENVKKEHSELKEKESELESTVGNLHVKLR 1396
Query: 420 SKMVDLETAGFDGINSAKQLEEKEREILKMKATMKLLDSSNKVSEKKAADLALENERLKK 479
+LE D EE M T+ L S + + ++ D+ + + LKK
Sbjct: 1397 KSKSELEACSADESKVRGASEE-------MILTLSRLTSETEEARREVEDMKNKTDELKK 1555
Query: 480 HAEALSATQKVKEGELVKSQAEITELNSANSELKNENSKLHSEISELKNSILDQLEAGFS 539
AEA + E +L ++ E +A + + + L S + S + A +
Sbjct: 1556 EAEATKLALEEAEKKLKEATEEAEAAKAAEASAIEQITVLTERTSARRASTSSESGAAMT 1735
Query: 540 KAKEQILFLNPQV 552
+ E+ L +V
Sbjct: 1736 ISTEEFESLKRKV 1774
>TC86844 similar to GP|16797791|gb|AAL27150.1 bZIP transcription factor
{Nicotiana tabacum}, partial (47%)
Length = 1609
Score = 37.0 bits (84), Expect = 0.022
Identities = 59/284 (20%), Positives = 114/284 (39%), Gaps = 37/284 (13%)
Frame = +1
Query: 315 TPEPTKGKDA------SQPSMEKFMMKNNPQHLAHQSGSSSAPPPTWKSVLKEFEELTSE 368
T + KG D S+ + +KF+ + Q A ++ +++A P + S
Sbjct: 139 TSKACKGGDTKMNRSDSEWAFQKFLRE---QEAAEEAEAATAKPSS------------SS 273
Query: 369 EVTSLWDSKIDFNALVETNLVFKADQEKIKRIGLKEACQAIM-TKGLEIAA--------- 418
TS S +D N + N + D + + + L AC A+ ++G + +
Sbjct: 274 TSTSTSSSTVDVNLKIN-NSIDSEDYQALLKTKLDLACAAVAKSRGSLVKSQDPDNGSQP 450
Query: 419 -----ISKMVDLETAGFDGINSAKQLEEKEREIL--------KMKATMKLLDSSNKVSEK 465
+ + L+ G G N +L+ K+ ++ K T+K S + E+
Sbjct: 451 SYPYELGPLATLKECGPSG-NDPSKLQNKDIKVAVGVPCMPKKPAVTIKSTTSGSSDDEE 627
Query: 466 KAADLAL--ENERLKKHAEALSATQKVKEGELVKSQAEITELNSANSELKNENSKLHSEI 523
++ + +N K + + ++ + QA +TEL + SEL+ ENS L +
Sbjct: 628 GDGEINMNGDNPTDAKRVRRMLSNRESARRSRRRKQAHLTELETQVSELRGENSSLLKRL 807
Query: 524 SEL----KNSILDQ--LEAGFSKAKEQILFLNPQVSINLAGSNP 561
+++ NS +D L+A + ++ V GSNP
Sbjct: 808 TDVTQKFNNSAVDNRILKADVETLRAKVKMAEETVK-RFTGSNP 936
>TC78777 similar to PIR|T10985|T10985 regulator protein ROM2 - kidney bean,
partial (84%)
Length = 1822
Score = 35.4 bits (80), Expect = 0.064
Identities = 45/199 (22%), Positives = 79/199 (39%), Gaps = 11/199 (5%)
Frame = +1
Query: 415 EIAAISKMVDLETAGFDGINSAKQLEEKEREILKMKATMKLLDSSNKVSEKKAADLA--- 471
EIAA KM+ + AG G L+++ + + +N S + + +
Sbjct: 790 EIAASDKMMAVAPAGVTGQLVGPVASSAMTTALELRNSSSVHSKTNPTSTPQPSAVLPPE 969
Query: 472 --LENERLKKHAEALSATQKVKEGELVKSQAEITELNSANSELKNENSKLHSEISEL-KN 528
++NER K + ++ ++ QAE EL L E++ L SEI+ L +N
Sbjct: 970 AWIQNERELKRERRKQSNRESARRSRLRKQAEAEELARKVESLNAESASLRSEINRLAEN 1149
Query: 529 SILDQLEAGFSKAKEQILFLNPQVSINLAG-----SNPYARIVDGKLINPDTGDEEEEEE 583
S ++E K K +I L I L + P + +N ++G + E
Sbjct: 1150SERLRMENAALKEKFKIAKLGQPKEIILTNIDSQRTTPVSTENLLSRVNNNSGSNDRTVE 1329
Query: 584 YEGDKNEEDGNANNNEGEG 602
+E+G +N G
Sbjct: 1330------DENGYCDNKPNSG 1368
>TC92524 similar to GP|19698943|gb|AAL91207.1 unknown protein {Arabidopsis
thaliana}, partial (38%)
Length = 721
Score = 34.7 bits (78), Expect = 0.11
Identities = 25/82 (30%), Positives = 43/82 (51%), Gaps = 1/82 (1%)
Frame = +3
Query: 437 KQLEEKEREILKMKATMKLLDSSNKVSEKKAADLALENERLKKHAEALSATQKVKEGELV 496
+++E+ + + ++K + L S ++ S+ +L E ERLKK E + QK K L
Sbjct: 270 QEIEKMAKSMKELKKENQFLKSKSEKSDVTLIELVDERERLKKQLEK-TKNQKEKLESLC 446
Query: 497 KS-QAEITELNSANSELKNENS 517
+S QAE ++ S N + NS
Sbjct: 447 RSLQAERKQILSENKSNNSSNS 512
>TC92853 similar to GP|20268748|gb|AAM14077.1 unknown protein {Arabidopsis
thaliana}, partial (21%)
Length = 761
Score = 34.3 bits (77), Expect = 0.14
Identities = 29/112 (25%), Positives = 51/112 (44%), Gaps = 10/112 (8%)
Frame = +3
Query: 491 KEGELVKSQAEITEL-----NSANSELKNENSKLHSEISELKNSILDQLEAGFSKAKEQI 545
++G+L+K EI N + E+K N K + EL+ + + + ++ + I
Sbjct: 111 RDGQLIKELEEILSREGLSSNPSEKEIKEVNRK-KARAKELEGIDMSNIVSS-TRRRATI 284
Query: 546 LFL-----NPQVSINLAGSNPYARIVDGKLINPDTGDEEEEEEYEGDKNEED 592
F+ P++ + +G + D N D G E EEEE + D+ EED
Sbjct: 285 SFVAPSPPKPKIPVETSGKDTKGSDND----NDDEGKENEEEEEDEDEEEED 428
>TC89797 GP|13775543|gb|AAK39351.1 Hypothetical protein Y73B3A.17
{Caenorhabditis elegans}, partial (1%)
Length = 958
Score = 33.5 bits (75), Expect = 0.24
Identities = 28/91 (30%), Positives = 44/91 (47%), Gaps = 7/91 (7%)
Frame = -2
Query: 441 EKEREILKMKATMKLLDSSNKVSEKKAADLALENERLKKHAEALSATQKVKEGELVKSQA 500
EKERE++ +++S V EKK + ++EN L + + + T + + EL Q
Sbjct: 243 EKEREMM--------VENSKLVGEKKEMEKSIEN--LTEGRDTVYRTLDMVKRELENRQR 94
Query: 501 EITELNSANSEL-------KNENSKLHSEIS 524
E+ E A E+ +NE KL EIS
Sbjct: 93 EVDEARRARDEVEKVKVGYENEVVKLQGEIS 1
>TC88472 similar to GP|19423958|gb|AAL87269.1 unknown protein {Arabidopsis
thaliana}, partial (46%)
Length = 1019
Score = 33.5 bits (75), Expect = 0.24
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 5/99 (5%)
Frame = +2
Query: 437 KQLEEKEREILKMKATMKL-LDSSNKVSEKKA----ADLALENERLKKHAEALSATQKVK 491
K++ + ERE +K + +L LD +N + + A + +E RL K + L Q +K
Sbjct: 296 KRIHKAEREKMKREHLNELFLDLANALDLSEPNNGKASILIEASRLLK--DLLCQIQSLK 469
Query: 492 EGELVKSQAEITELNSANSELKNENSKLHSEISELKNSI 530
+ E V +E + +ELK ENS L ++I +L+ I
Sbjct: 470 K-ENVSLLSESHYVTMEKNELKEENSSLETQIEKLQGEI 583
>TC86621 similar to PIR|F84664|F84664 hypothetical protein At2g26770
[imported] - Arabidopsis thaliana, partial (97%)
Length = 1890
Score = 33.5 bits (75), Expect = 0.24
Identities = 29/127 (22%), Positives = 54/127 (41%), Gaps = 5/127 (3%)
Frame = +1
Query: 424 DLETAGFDGINSAKQLEEKER-----EILKMKATMKLLDSSNKVSEKKAADLALENERLK 478
DL + G+ +A +L E+ R + K KL DS + + A + E
Sbjct: 355 DLASKFEKGLAAAAKLSEEARLREAASLEKHVLLKKLRDSLESLKGRVAGRNKDDVEDAI 534
Query: 479 KHAEALSATQKVKEGELVKSQAEITELNSANSELKNENSKLHSEISELKNSILDQLEAGF 538
EAL+ +EGEL++ +AE+ +L + + + KL E + +D +
Sbjct: 535 AMVEALAVQLTQREGELLQEKAEVKKLANFLKQASEDAKKLVDEERAFARAEIDNARSAV 714
Query: 539 SKAKEQI 545
+ +E +
Sbjct: 715 QRVEESL 735
>TC86622 weakly similar to GP|20197623|gb|AAM15156.1 putative myosin heavy
chain {Arabidopsis thaliana}, partial (17%)
Length = 2546
Score = 33.5 bits (75), Expect = 0.24
Identities = 32/161 (19%), Positives = 69/161 (41%), Gaps = 19/161 (11%)
Frame = +2
Query: 402 LKEACQAIMTKGLEIAAISKMV-----DLETAGFDGINSAKQLEEKEREILKMKATMKLL 456
L+EA + +K E+ ++ + + ++ AG I+ + EE ++ +++ + L
Sbjct: 476 LQEAIEKFNSKDSEVQSLLEKIKILEENIAGAGEQSISLKSEFEESLSKLASLQSENEDL 655
Query: 457 DSSNKVSEKKAADLALENE--------------RLKKHAEALSATQKVKEGELVKSQAEI 502
+EKK + ENE L++ ++ + ++V ELV + +
Sbjct: 656 KRQIVEAEKKTSQSFSENELLVGTNIQLKTKIDELQESLNSVVSEKEVTAQELVSHKNLL 835
Query: 503 TELNSANSELKNENSKLHSEISELKNSILDQLEAGFSKAKE 543
ELN S+ +S I E+++ + + L+ K E
Sbjct: 836 AELNDVQSKSSEIHSANEVRILEVESKLQEALQKHTEKESE 958
>TC83004 similar to PIR|T10985|T10985 regulator protein ROM2 - kidney bean,
partial (78%)
Length = 1250
Score = 33.5 bits (75), Expect = 0.24
Identities = 33/120 (27%), Positives = 50/120 (41%), Gaps = 5/120 (4%)
Frame = +1
Query: 472 LENERLKKHAEALSATQKVKEGELVKSQAEITELNSANSELKNENSKLHSEISEL-KNSI 530
++NER K + ++ ++ QAE EL L EN L SE++EL +NS
Sbjct: 757 MQNERELKRERRKQSNRESARRSRLRKQAEAEELARRVDALTAENLALKSEMNELAENSA 936
Query: 531 LDQLEAGFSKAKEQILFLNPQVSINLAGSNPYARIVDGK----LINPDTGDEEEEEEYEG 586
++E K K + L I L G + A V + +N D+ EE G
Sbjct: 937 KLKIENATLKEKLENTQLGQTEEIILNGMDKRATPVSTENLLSRVNDSNSDDRAAEEENG 1116
>BI310451 weakly similar to GP|7339698|dbj| Similar to Caenorhabditis elegans
chromosome V cosmid T10G3; Homo sapiens endosomal
protein P162, partial (10%)
Length = 755
Score = 33.1 bits (74), Expect = 0.32
Identities = 33/136 (24%), Positives = 60/136 (43%), Gaps = 20/136 (14%)
Frame = +2
Query: 489 KVKEGELVKSQAE--ITELNSANSELKNENSKLHSEISELKNSILDQLEAGFSKAKE--- 543
KV + E + AE L+ +N++L E S L S + L+ S+ EA + AK+
Sbjct: 11 KVSKAESLADSAEDKCIILSESNADLNEEVSFLRSRLECLEGSLHKAEEANMTTAKDIGK 190
Query: 544 ----------QILFLNPQVSINLAGSNPYARIVDGKLINPDTGDEEE-----EEEYEGDK 588
Q+ ++ L+ +I+ KL G +E E+EG+K
Sbjct: 191 QIKVFKSLVTQLALERERLIKKLSSLASENKILVVKLRQTYKGSSKEVGATFSSEHEGNK 370
Query: 589 NEEDGNANNNEGEGEN 604
++ +AN+NE + ++
Sbjct: 371 TSKNSSANDNEVKSDS 418
>AW688848 homologue to PIR|T46027|T4 hypothetical protein T10K17.260 -
Arabidopsis thaliana, partial (10%)
Length = 661
Score = 32.7 bits (73), Expect = 0.41
Identities = 29/111 (26%), Positives = 45/111 (40%), Gaps = 8/111 (7%)
Frame = +1
Query: 437 KQLEEKE----REILKMKATMKLLDSSNKVS----EKKAADLALENERLKKHAEALSATQ 488
K LEE+ +EI+ ++ KLL+ K E+K A E E+ + E L
Sbjct: 187 KLLEERVHVACKEIITLEKQTKLLEEEEKEKREEEERKERKRAKEREKKLRRKERLKGKD 366
Query: 489 KVKEGELVKSQAEITELNSANSELKNENSKLHSEISELKNSILDQLEAGFS 539
K KEG+ +S + + EL + KNS++ E S
Sbjct: 367 KNKEGKFSESNDVPSSPEAVKEELSAPADTEQNNALSCKNSVVATDEPNLS 519
>TC79702 MtN14
Length = 973
Score = 32.7 bits (73), Expect = 0.41
Identities = 46/181 (25%), Positives = 71/181 (38%), Gaps = 2/181 (1%)
Frame = +2
Query: 413 GLEIAAISKMVDLETAGFDGIN--SAKQLEEKEREILKMKATMKLLDSSNKVSEKKAADL 470
G+ I A ++V +TA D S K E+ EI++ T+ ++ + S ++A L
Sbjct: 44 GIPIMATVEVVSAQTALSDDTAQLSLKSDEKTTEEIVESPITLAASETKEESSAEEAKPL 223
Query: 471 ALENERLKKHAEALSATQKVKEGELVKSQAEITELNSANSELKNENSKLHSEISELKNSI 530
K+ E + K E E K E TE E K + L+ E E K +
Sbjct: 224 V--KAETKEVVEEVVVPVKDTEEETKKE--EQTETKEPVEETKENGNSLNVE--ETKENG 385
Query: 531 LDQLEAGFSKAKEQILFLNPQVSINLAGSNPYARIVDGKLINPDTGDEEEEEEYEGDKNE 590
+EA K E+ +N N+ P+T D + EE +KNE
Sbjct: 386 DSVVEAVQEKPAEESETVNVVKDENVVAE-------------PETKDNVKTEETSEEKNE 526
Query: 591 E 591
E
Sbjct: 527 E 529
>TC87542 weakly similar to GP|22136436|gb|AAM91296.1 putative protein
{Arabidopsis thaliana}, partial (39%)
Length = 2234
Score = 32.0 bits (71), Expect = 0.70
Identities = 70/277 (25%), Positives = 120/277 (43%), Gaps = 11/277 (3%)
Frame = +2
Query: 320 KGKDASQPSMEKFMMKNNPQH--LAHQ----SGSSSAPPPTWKSVLKEFEE--LTSEEVT 371
+ +DAS E F H L+H + +SSA KS K F+ L S +
Sbjct: 521 ESRDASNDEEETFRKIRETIHEKLSHARQLLNSASSARKDAIKSRRKAFQNANLASLKYM 700
Query: 372 SLWDSKIDFNALVETNLVFKADQEKIKRIGLKEACQAIMTKGLEIA-AISKMVDLETAGF 430
L +++++ E F+ + + + E + I T+ L A A +DL+
Sbjct: 701 EL-ENQLEQACEAED---FETAEMVSQHLSASEKDKQICTESLRQADAFIDALDLKLQ-- 862
Query: 431 DGINSAKQLEEKEREILKMKATMKLLDSSNKVSEKKAADL-ALENERLKKHAEALSATQK 489
++S EE+ +L AT + ++ + + KKA L + E E+ +EAL +
Sbjct: 863 HALDSHIAAEEESATLLHHYATNAVNNADSAM--KKATSLHSKEIEQWFSSSEALEVKKM 1036
Query: 490 VKEGELVKSQAEITELNSANSELKNENSKLHSEI-SELKNSILDQLEAGFSKAKEQILFL 548
E E TELN+ N E E+ K EI + K+ ++D+L E++L L
Sbjct: 1037ELEIESHFISEAHTELNN-NIEHSIEDDKKEKEILCKRKSVLMDEL--------EKLLAL 1189
Query: 549 NPQVSINLAGSNPYARIVDGKLINPDTGDEEEEEEYE 585
Q +A ++ + V+ K+ N +G EE + E
Sbjct: 1190VKQKEKEIADNDSDLKAVEHKINNVVSGFEEIQSTIE 1300
>TC82286 weakly similar to PIR|B96544|B96544 hypothetical protein F4M15.4
[imported] - Arabidopsis thaliana, partial (5%)
Length = 1782
Score = 32.0 bits (71), Expect = 0.70
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +2
Query: 574 DTGDEEEEEEYEGDKNEEDGNANNNEGEGENH 605
D GDEE+EEE E ++ +ED + N+GE ++
Sbjct: 404 DWGDEEKEEEEEENEEKEDEAEHMNDGESGSY 499
>BI310236 similar to SP|Q9UZC8|RA50_ DNA double-strand break repair rad50
ATPase. {Pyrococcus abyssi}, partial (2%)
Length = 819
Score = 31.6 bits (70), Expect = 0.92
Identities = 29/117 (24%), Positives = 55/117 (46%)
Frame = +2
Query: 433 INSAKQLEEKEREILKMKATMKLLDSSNKVSEKKAADLALENERLKKHAEALSATQKVKE 492
I K+ KE+++ + +K L+S K+ E + E E +KH E ++ KE
Sbjct: 23 IGQVKEFYSKEKQL---DSQLKELESKKKLFECQVK----EFESKEKHHEVQVKERESKE 181
Query: 493 GELVKSQAEITELNSANSELKNENSKLHSEISELKNSILDQLEAGFSKAKEQILFLN 549
E + ++ EL S K++ + S+ +L+ +LE+ +K K ++ LN
Sbjct: 182 REF---EGQVKELESRKKHFKSQVEEFKSKEKQLEGR-WSELESKENKFKAKVKELN 340
>AL388248 weakly similar to GP|6062758|gb|A NADH dehydrogenase subunit II
{Cynolebias alexandri}, partial (7%)
Length = 417
Score = 31.6 bits (70), Expect = 0.92
Identities = 21/90 (23%), Positives = 39/90 (43%)
Frame = -2
Query: 438 QLEEKEREILKMKATMKLLDSSNKVSEKKAADLALENERLKKHAEALSATQKVKEGELVK 497
+L KERE +K + + K ++ L NERLK+ + E E
Sbjct: 395 ELLRKERENMKAQIASLQAEMEEKGDSEEVGTLQKHNERLKEKLANWKEKYEASETEREA 216
Query: 498 SQAEITELNSANSELKNENSKLHSEISELK 527
++ E + N++ L + +L ++ EL+
Sbjct: 215 AEGEASAANASVRRLTMKVLELSKQLKELQ 126
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.313 0.130 0.365
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,344,648
Number of Sequences: 36976
Number of extensions: 256806
Number of successful extensions: 1618
Number of sequences better than 10.0: 69
Number of HSP's better than 10.0 without gapping: 1440
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1555
length of query: 605
length of database: 9,014,727
effective HSP length: 102
effective length of query: 503
effective length of database: 5,243,175
effective search space: 2637317025
effective search space used: 2637317025
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 61 (28.1 bits)
Lotus: description of TM0214.3