TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0214.10
         (74 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC86168 homologue to GP|13936812|gb|AAK49947.1 TGF-beta receptor...    72  4e-14
TC80879                                                                40  2e-04
BQ752230                                                               26  3.3
AW685377                                                               26  3.3
TC76781 similar to GP|12539609|gb|AAG59584.1 pathogen-inducible ...    25  5.6
TC81705 weakly similar to GP|6721520|dbj|BAA89562.1 EST AU029428...    25  7.3

>TC86168 homologue to GP|13936812|gb|AAK49947.1 TGF-beta
           receptor-interacting protein 1 {Phaseolus vulgaris},
           complete
          Length = 1322

 Score = 72.0 bits (175), Expect = 4e-14
 Identities = 39/71 (54%), Positives = 48/71 (66%)
 Frame = +2

Query: 2   VLRGGQVASAVSTTDHHAGNFEAKFYDMILQEEFRDVKGHSGLINVMAFIMEERPALSDP 61
           VL GGQ ASAV+TTDH AG FEAKF+D ILQEE   VKGH G IN +AF  + + + S  
Sbjct: 911 VLGGGQDASAVTTTDHRAGKFEAKFFDKILQEEIGGVKGHFGPINALAFNPDGK-SFSSG 1087

Query: 62  VSDGHVLVQFY 72
             DG+V +  +
Sbjct: 1088GEDGYVRLHHF 1120


>TC80879 
          Length = 942

 Score = 40.0 bits (92), Expect = 2e-04
 Identities = 20/26 (76%), Positives = 22/26 (83%)
 Frame = +3

Query: 49  AFIMEERPALSDPVSDGHVLVQFYGN 74
           A IMEE  ALSD V+DG+VLVQFYGN
Sbjct: 657 AEIMEESCALSDRVNDGNVLVQFYGN 734


>BQ752230 
          Length = 674

 Score = 25.8 bits (55), Expect = 3.3
 Identities = 13/28 (46%), Positives = 16/28 (56%)
 Frame = +2

Query: 39  KGHSGLINVMAFIMEERPALSDPVSDGH 66
           KGHSGLI       + R  L+ PV+ GH
Sbjct: 83  KGHSGLIVSSDTDTQRRACLNGPVALGH 166


>AW685377 
          Length = 430

 Score = 25.8 bits (55), Expect = 3.3
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = -2

Query: 35  FRDVKGHSGLINVMAFIMEERPALSDPVSDGHV 67
           F+D+ GH   IN+++         S   SD H+
Sbjct: 159 FKDINGHCFGINILSLFFRSMAIRSQTXSDHHI 61


>TC76781 similar to GP|12539609|gb|AAG59584.1 pathogen-inducible
            alpha-dioxygenase {Nicotiana attenuata}, partial (94%)
          Length = 2232

 Score = 25.0 bits (53), Expect = 5.6
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +2

Query: 15   TDHHAGNFEAKFYDMILQEEFRDVKGHSGLINVMAFIMEER 55
            TD   G   A +Y + L ++F+D  GHSG   +  F+  +R
Sbjct: 1043 TDTLLGGMRANWYGL-LGKKFKDTFGHSGNSILSGFVGMKR 1162


>TC81705 weakly similar to GP|6721520|dbj|BAA89562.1 EST AU029428(E30359)
           corresponds to a region of the predicted gene.~Similar
           to antifreeze-like, partial (33%)
          Length = 1443

 Score = 24.6 bits (52), Expect = 7.3
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +1

Query: 17  HHAGNFEAKFYDMILQEEFRDVKGHSGLINV 47
           HH  +  + F  M+ Q E   + GH G+++V
Sbjct: 205 HHYNHAFSGFSAMLTQSEASALSGHDGVVSV 297


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.320    0.137    0.394 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,690,564
Number of Sequences: 36976
Number of extensions: 12249
Number of successful extensions: 41
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of query: 74
length of database: 9,014,727
effective HSP length: 50
effective length of query: 24
effective length of database: 7,165,927
effective search space: 171982248
effective search space used: 171982248
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 51 (24.3 bits)