TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0213.7
         (451 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC79804 weakly similar to GP|6175165|gb|AAF04891.1| Mutator-like...   103  8e-29
BF646328 similar to PIR|F84533|F845 Mutator-like transposase [im...    59  5e-20
CB891859 similar to GP|6175165|gb| Mutator-like transposase {Ara...    74  2e-13
AL375902 similar to GP|9759134|dbj mutator-like transposase-like...    67  1e-11
AL375901 similar to GP|9759134|dbj mutator-like transposase-like...    42  6e-04
TC89654 weakly similar to PIR|T05644|T05644 hypothetical protein...    31  1.1
BE319298 similar to GP|17385689|dbj putative Myb-related transcr...    31  1.1
TC92024 similar to PIR|T05645|T05645 hypothetical protein F20D10...    30  2.5
TC89977 similar to GP|5764395|gb|AAD51282.1| far-red impaired re...    29  3.3
TC85951 similar to GP|18000068|gb|AAL54885.1 cytochrome P450-dep...    29  4.3
TC81460 similar to PIR|B84478|B84478 probable replication protei...    29  4.3
TC87778 similar to GP|5103827|gb|AAD39657.1| ESTs gb|F20110 and ...    28  5.6
CA922976 weakly similar to GP|9502168|gb|A contains simlarity to...    28  7.3
TC83004 similar to PIR|T10985|T10985 regulator protein ROM2 - ki...    28  9.5

>TC79804 weakly similar to GP|6175165|gb|AAF04891.1| Mutator-like transposase
            {Arabidopsis thaliana}, partial (57%)
          Length = 2129

 Score =  103 bits (256), Expect(2) = 8e-29
 Identities = 68/231 (29%), Positives = 113/231 (48%), Gaps = 1/231 (0%)
 Frame = +1

Query: 163  HIFCLRHLYANFKKKFGGGVVIRNLMMAAAKATYHQLWTEKMMELQALHPEAYTWLMQIP 222
            H FC+RHL  N  K+F    +I +L+ +AA AT    + EKM E++ + P A  WL    
Sbjct: 1021 HAFCMRHLSENIGKEFKNSRLI-HLLWSAAYATTINAFREKMAEIEEVSPNASMWLQHFH 1197

Query: 223  TRAWCKHAFTFYPKCDVLMNNLSESFNATILLVRDKPVLTMVDWIRSYIMGRFATMNEKL 282
               W    F    +   L +N+ E FN  IL  ++ P++ +++ I+S +   F     K 
Sbjct: 1198 PSQWALVYFEG-TRYGHLSSNIEE-FNKWILEAQELPIIQVIERIQSKLKTEFDDRRLKS 1371

Query: 283  EKYKGEVMPKPLKRLEHEIEMVRYWVATRCGEDKYEVKHMVSQDQF-VVNLAEHTCSCNF 341
              +   + P   +R+   I     +   +  E ++EV   +S D+  +VN+  H+CSC  
Sbjct: 1372 SSWCSVLTPSSERRMVEAINRASTYQVLKSDEVEFEV---ISADRSDIVNIGSHSCSCRD 1542

Query: 342  WELVGIPCRHAVAAISHSSQRPEDFVHPYYRREAYMATYGHVITPINGQKL 392
            W+L GIPC HAVAA+  S +    +    +   +Y  T    +TP++ + L
Sbjct: 1543 WQLYGIPCSHAVAALISSRKDVYAYTAKCFTVASYRDTVCRGVTPLSLENL 1695



 Score = 42.0 bits (97), Expect(2) = 8e-29
 Identities = 25/73 (34%), Positives = 38/73 (51%), Gaps = 6/73 (8%)
 Frame = +3

Query: 385  TPINGQKLWPTT-----NDPYIL-PPLYKRAPGRPKKLRRRDPHEDTTDNQTRLRSRCGQ 438
            TP+ G+  W T      ND  ++ PP ++R PGRP+K +R    +   D  T   SRC Q
Sbjct: 1674 TPVPGKLEWRTDESALDNDIAVVRPPKFRRPPGRPEK-KRICVEDHNRDKHTVHCSRCNQ 1850

Query: 439  FGHNSRSCRNPVV 451
             GH   +C+  ++
Sbjct: 1851 TGHYKTTCKAEMI 1889


>BF646328 similar to PIR|F84533|F845 Mutator-like transposase [imported] -
           Arabidopsis thaliana, partial (3%)
          Length = 636

 Score = 59.3 bits (142), Expect(2) = 5e-20
 Identities = 27/69 (39%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
 Frame = -1

Query: 305 RYWVATRCGEDKYEVKHMVSQ-DQFVVNLAEHTCSCNFWELVGIPCRHAVAAISHSSQRP 363
           R W AT  G+ +    ++ ++ ++++VNLA+ TC+C  W L GIPC H +  I H+    
Sbjct: 483 RGWKATWHGDMEMNNFNVSNETNKYIVNLAQRTCACRKWNLTGIPCAHVIPCIWHNGLAD 304

Query: 364 EDFVHPYYR 372
           E+FV  YYR
Sbjct: 303 ENFVSSYYR 277



 Score = 56.2 bits (134), Expect(2) = 5e-20
 Identities = 23/48 (47%), Positives = 33/48 (67%)
 Frame = -3

Query: 372 RREAYMATYGHVITPINGQKLWPTTNDPYILPPLYKRAPGRPKKLRRR 419
           R+   +ATY H++ P +G KLWP TN  +I P   +R+ GRPKKLR++
Sbjct: 193 RKSQCLATYSHIVLPSSGPKLWPVTNTEHINPLAKRRSAGRPKKLRKK 50


>CB891859 similar to GP|6175165|gb| Mutator-like transposase {Arabidopsis
           thaliana}, partial (27%)
          Length = 625

 Score = 73.6 bits (179), Expect = 2e-13
 Identities = 51/200 (25%), Positives = 96/200 (47%), Gaps = 11/200 (5%)
 Frame = +1

Query: 151 LTVFDD----LMGGVE-------HIFCLRHLYANFKKKFGGGVVIRNLMMAAAKATYHQL 199
           LT+  D    ++ GVE       H FC+RHL  +F+K+F   +++ NL+  AA       
Sbjct: 34  LTILSDRQQGIVDGVEANFPTAFHGFCMRHLSDSFRKEFNNTMLV-NLLWEAANCLTIIE 210

Query: 200 WTEKMMELQALHPEAYTWLMQIPTRAWCKHAFTFYPKCDVLMNNLSESFNATILLVRDKP 259
           +  K+ME++ +  +A  W+ ++P R W    F  + +   L  N+ E+ N+ IL     P
Sbjct: 211 FEGKVMEIEEISQDAAYWIRRVPPRLWATAYFEGH-RFGHLTANIVEALNSWILEASGLP 387

Query: 260 VLTMVDWIRSYIMGRFATMNEKLEKYKGEVMPKPLKRLEHEIEMVRYWVATRCGEDKYEV 319
           ++ M++ IR  +M  F    E   ++   ++P   + +   +E  R +   R  E ++EV
Sbjct: 388 IIQMMECIRRQLMTWFNERRETSMQWTSILVPSAERSVAEALERARTYQVLRANEAEFEV 567

Query: 320 KHMVSQDQFVVNLAEHTCSC 339
             +  +   +V++    C C
Sbjct: 568 --ISHEGTNIVDIRNRCCLC 621


>AL375902 similar to GP|9759134|dbj mutator-like transposase-like protein
           {Arabidopsis thaliana}, partial (20%)
          Length = 542

 Score = 67.0 bits (162), Expect = 1e-11
 Identities = 38/125 (30%), Positives = 51/125 (40%), Gaps = 11/125 (8%)
 Frame = +2

Query: 337 CSCNFWELVGIPCRHAVAAISHSSQRPEDFVHPYYRREAYMATYGHVITPINGQKLWPTT 396
           CSC  W+L G PC HA AA+         F  P +  ++Y   Y  +I PI  +  W   
Sbjct: 14  CSCRRWQLYGYPCAHAAAALISCGHNAHMFAEPCFTVQSYRMAYSQMIYPIPDKSQWREH 193

Query: 397 N-----------DPYILPPLYKRAPGRPKKLRRRDPHEDTTDNQTRLRSRCGQFGHNSRS 445
                       D  I PP  +R PGRPKK   R  +        +   RC   GH+ + 
Sbjct: 194 GEGAEGGGGARVDIVIHPPKIRRPPGRPKKKVLRVENFKRPKRVVQC-GRCHMLGHSQKK 370

Query: 446 CRNPV 450
           C  P+
Sbjct: 371 CTMPI 385


>AL375901 similar to GP|9759134|dbj mutator-like transposase-like protein
           {Arabidopsis thaliana}, partial (27%)
          Length = 493

 Score = 41.6 bits (96), Expect = 6e-04
 Identities = 33/157 (21%), Positives = 64/157 (40%)
 Frame = +3

Query: 163 HIFCLRHLYANFKKKFGGGVVIRNLMMAAAKATYHQLWTEKMMELQALHPEAYTWLMQIP 222
           H FCLR++  NF+  F    ++ N+   A  A     +  K+ E+  +  +  +W    P
Sbjct: 24  HGFCLRYVSENFRDTFKNTKLV-NIFWNAVYALTAAEFESKITEMIEVSQDVISWFQHFP 200

Query: 223 TRAWCKHAFTFYPKCDVLMNNLSESFNATILLVRDKPVLTMVDWIRSYIMGRFATMNEKL 282
              W   A+    +       ++E      L   + PV+ M+++IR  +   F    E  
Sbjct: 201 PFLWAV-AYFDGVRYGHFTLGVTELLYNWALECHELPVVQMMEYIRQQMTSWFNDRREVG 377

Query: 283 EKYKGEVMPKPLKRLEHEIEMVRYWVATRCGEDKYEV 319
            ++   ++P   KR+   I     +   R  E ++E+
Sbjct: 378 MEWTSILVPSAEKRISEAIADAHCYQVLRANEVEFEI 488


>TC89654 weakly similar to PIR|T05644|T05644 hypothetical protein F20D10.290 -
            Arabidopsis thaliana, partial (65%)
          Length = 1358

 Score = 30.8 bits (68), Expect = 1.1
 Identities = 21/65 (32%), Positives = 33/65 (50%)
 Frame = +1

Query: 290  MPKPLKRLEHEIEMVRYWVATRCGEDKYEVKHMVSQDQFVVNLAEHTCSCNFWELVGIPC 349
            M  P  ++E    +  Y VA + GE+  +  H V+   F  +  + +CSC  +E  GI C
Sbjct: 1030 MANPATKIEDSGTITTYRVA-KFGEN--QTSHTVA---FNSSEMKASCSCQMFEYSGIVC 1191

Query: 350  RHAVA 354
            RH +A
Sbjct: 1192 RHILA 1206


>BE319298 similar to GP|17385689|dbj putative Myb-related transcription
           factor {Oryza sativa (japonica cultivar-group)}, partial
           (20%)
          Length = 425

 Score = 30.8 bits (68), Expect = 1.1
 Identities = 11/15 (73%), Positives = 12/15 (79%)
 Frame = +2

Query: 434 SRCGQFGHNSRSCRN 448
           S CG FGHNSR+C N
Sbjct: 44  SYCGNFGHNSRTCNN 88


>TC92024 similar to PIR|T05645|T05645 hypothetical protein F20D10.300 -
           Arabidopsis thaliana, partial (11%)
          Length = 938

 Score = 29.6 bits (65), Expect = 2.5
 Identities = 16/42 (38%), Positives = 21/42 (49%)
 Frame = +3

Query: 313 GEDKYEVKHMVSQDQFVVNLAEHTCSCNFWELVGIPCRHAVA 354
           GED     H     +F V   + TCSC  +E  G+ CRH +A
Sbjct: 36  GED-----HKAYNVRFNVLEMKATCSCQMFEFSGLLCRHILA 146


>TC89977 similar to GP|5764395|gb|AAD51282.1| far-red impaired response
           protein {Arabidopsis thaliana}, partial (35%)
          Length = 1523

 Score = 29.3 bits (64), Expect = 3.3
 Identities = 16/66 (24%), Positives = 32/66 (48%), Gaps = 6/66 (9%)
 Frame = +2

Query: 316 KYEVKHMVSQDQFVVNL----AEHTCSCNFWELVGIPCRHAVAAISH--SSQRPEDFVHP 369
           +Y V+     ++F+V      +E +C C  +E  G  CRHA++ +     S  P  ++  
Sbjct: 308 RYIVQDYEKDEEFLVTWKELSSEVSCFCRLFEYKGFLCRHALSVLQRCGCSSVPSHYIMK 487

Query: 370 YYRREA 375
            + ++A
Sbjct: 488 RWTKDA 505


>TC85951 similar to GP|18000068|gb|AAL54885.1 cytochrome P450-dependent
           fatty acid hydroxylase {Vicia sativa}, partial (45%)
          Length = 742

 Score = 28.9 bits (63), Expect = 4.3
 Identities = 12/28 (42%), Positives = 16/28 (56%)
 Frame = +2

Query: 394 PTTNDPYILPPLYKRAPGRPKKLRRRDP 421
           PT++ P +LPP    AP  P K  R+ P
Sbjct: 113 PTSSKPSLLPPSSSTAPSVPAKFSRQTP 196


>TC81460 similar to PIR|B84478|B84478 probable replication protein A1
           [imported] - Arabidopsis thaliana, partial (8%)
          Length = 762

 Score = 28.9 bits (63), Expect = 4.3
 Identities = 12/20 (60%), Positives = 12/20 (60%)
 Frame = +2

Query: 388 NGQKLWPTTNDPYILPPLYK 407
           NGQ   PT   PY  PPLYK
Sbjct: 602 NGQNFRPTVQPPYQPPPLYK 661


>TC87778 similar to GP|5103827|gb|AAD39657.1| ESTs gb|F20110 and gb|F20109
           come from this gene. {Arabidopsis thaliana}, partial
           (24%)
          Length = 1350

 Score = 28.5 bits (62), Expect = 5.6
 Identities = 16/43 (37%), Positives = 22/43 (50%)
 Frame = -2

Query: 35  LHVFGGLQEGVC*RVQAIYRVGWLPFEDTVWGNLTVCCGQGPQ 77
           LH F   Q+G   +VQA+  +   PF D  W    + CG+ PQ
Sbjct: 743 LHSFSLCQDG---QVQALSHLYPTPFADKWWPG*NLLCGREPQ 624


>CA922976 weakly similar to GP|9502168|gb|A contains simlarity to Arabidopsis
           thaliana far-red impaired response protein
           (GB:AAD51282.1), partial (11%)
          Length = 827

 Score = 28.1 bits (61), Expect = 7.3
 Identities = 15/40 (37%), Positives = 20/40 (49%), Gaps = 2/40 (5%)
 Frame = -3

Query: 337 CSCNFWELVGIPCRHA--VAAISHSSQRPEDFVHPYYRRE 374
           CSC  +E  GI CRHA  +    +  Q PE +    + RE
Sbjct: 702 CSCKEFESSGILCRHALRILVTKNYFQLPEKYYLSRWHRE 583


>TC83004 similar to PIR|T10985|T10985 regulator protein ROM2 - kidney bean,
           partial (78%)
          Length = 1250

 Score = 27.7 bits (60), Expect = 9.5
 Identities = 10/17 (58%), Positives = 13/17 (75%)
 Frame = +3

Query: 344 LVGIPCRHAVAAISHSS 360
           L+G+PCRH +   SHSS
Sbjct: 42  LIGLPCRHIMGKESHSS 92


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.341    0.149    0.525 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,902,973
Number of Sequences: 36976
Number of extensions: 236472
Number of successful extensions: 1718
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1698
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1713
length of query: 451
length of database: 9,014,727
effective HSP length: 99
effective length of query: 352
effective length of database: 5,354,103
effective search space: 1884644256
effective search space used: 1884644256
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 15 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.9 bits)
S2: 60 (27.7 bits)