BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0207.8
(258 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BG452501 43 1e-04
AL376506 homologue to GP|15021744|gb root nodule extensin {Pisum... 43 1e-04
TC76689 MtN12 37 0.010
TC86169 homologue to GP|6624721|emb|CAB63845.1 putative cysteine... 35 0.022
TC87476 homologue to PIR|T11622|T11622 extensin class 1 precurso... 34 0.064
TC78214 similar to SP|P39869|NIA_LOTJA Nitrate reductase (EC 1.6... 33 0.11
TC85413 similar to PIR|S23737|S23737 proline-rich protein precur... 33 0.11
TC85412 homologue to GP|15450763|gb|AAK96653.1 elongation factor... 33 0.11
TC76445 similar to PIR|T07623|T07623 extensin homolog HRGP2 - so... 32 0.19
TC88879 weakly similar to PIR|T04011|T04011 hypothetical protein... 32 0.19
TC77148 ENOD20 32 0.24
BF642399 similar to PIR|T10863|T10 extensin precursor - kidney b... 32 0.32
TC76326 homologue to PIR|C29356|C29356 hydroxyproline-rich glyco... 32 0.32
TC87122 weakly similar to GP|19911203|dbj|BAB86928. glucosyltran... 31 0.41
TC80054 SP|Q28009|FUS_BOVIN RNA-binding protein FUS (Pigpen prot... 31 0.41
TC76311 homologue to GP|3204132|emb|CAA07235.1 extensin {Cicer a... 31 0.41
TC76563 homologue to PIR|C29356|C29356 hydroxyproline-rich glyco... 31 0.54
TC90952 similar to GP|15724316|gb|AAL06551.1 AT4g34150/F28A23_90... 31 0.54
TC85816 similar to GP|15021744|gb|AAK77899.1 root nodule extensi... 30 0.70
BE998536 similar to GP|2598593|emb| MtN12 {Medicago truncatula},... 30 0.70
>BG452501
Length = 470
Score = 43.1 bits (100), Expect = 1e-04
Identities = 35/99 (35%), Positives = 46/99 (46%)
Frame = +1
Query: 1 MEGAGSYNDWGYYSPPQPHSTLSPYAAAFSVNRPPFNDVSAPFVDSDEPAYGVPPNPVHY 60
M+G GSYNDW YY+ S LS A FSVN + S P +SD + G N Y
Sbjct: 25 MKGFGSYNDWPYYA---ASSNLSASATPFSVN----HQYSNPIKESDSVS-GDSSNQFGY 180
Query: 61 PVHPRSYGYDFFPESDSVSKPYGYSGLASEDSFWYDQWP 99
+S Y F SD + YG++ + F Y + P
Sbjct: 181 SDGTKSQQY--FNSSDPWNSYYGFTASDAPCRFDYGKKP 291
>AL376506 homologue to GP|15021744|gb root nodule extensin {Pisum sativum},
partial (68%)
Length = 470
Score = 42.7 bits (99), Expect = 1e-04
Identities = 20/60 (33%), Positives = 28/60 (46%)
Frame = +2
Query: 6 SYNDWGYYSPPQPHSTLSPYAAAFSVNRPPFNDVSAPFVDSDEPAYGVPPNPVHYPVHPR 65
S N + Y SPP PH + P + +P ++ P +P Y PP PVH HP+
Sbjct: 83 SANKYAYSSPPPPHYSSPPPPPVHTYPKPVYHSPPPPVHTYPKPVYHSPPPPVHKYPHPK 262
>TC76689 MtN12
Length = 759
Score = 36.6 bits (83), Expect = 0.010
Identities = 21/56 (37%), Positives = 24/56 (42%)
Frame = +1
Query: 12 YYSPPQPHSTLSPYAAAFSVNRPPFNDVSAPFVDSDEPAYGVPPNPVHYPVHPRSY 67
Y+SPP P T P+ + PP P V P Y PP PVH P P Y
Sbjct: 214 YHSPPPPVHTYVPHPKPVYHSPPPPVHTYPPHVP--HPVYHSPPPPVHSPPPPHYY 375
Score = 31.2 bits (69), Expect = 0.41
Identities = 18/55 (32%), Positives = 25/55 (44%), Gaps = 1/55 (1%)
Frame = +1
Query: 12 YYSPPQPHSTLSPYAAAFSVNRPPFNDVSAPFVDSDEPAYGVPPNPVH-YPVHPR 65
Y+SPP P T + +P ++ P +P Y PP PVH Y HP+
Sbjct: 118 YHSPPPPVHT-------YPHPKPVYHSPPPPVHTYPKPVYHSPPPPVHTYVPHPK 261
Score = 28.1 bits (61), Expect = 3.5
Identities = 21/75 (28%), Positives = 30/75 (40%), Gaps = 1/75 (1%)
Frame = +1
Query: 12 YYSPPQPHSTLSPYAAAFSVNRPPFNDVSAPFVDS-DEPAYGVPPNPVHYPVHPRSYGYD 70
Y SPP P P +P ++ P + +P Y PP PVH HP+ +
Sbjct: 22 YPSPPPPPVHTYP--------KPVYHSPPPPVHHTYPKPVYHSPPPPVHTYPHPKPVYHS 177
Query: 71 FFPESDSVSKPYGYS 85
P + KP +S
Sbjct: 178PPPPVHTYPKPVYHS 222
>TC86169 homologue to GP|6624721|emb|CAB63845.1 putative cysteine protease
{Pisum sativum}, partial (96%)
Length = 1311
Score = 35.4 bits (80), Expect = 0.022
Identities = 48/173 (27%), Positives = 63/173 (35%), Gaps = 2/173 (1%)
Frame = +3
Query: 10 WGYYSPPQPHSTLSPYAAAFSVNRPPFNDVSAPFVDSDEPAYGVPPNPVHYPVHPRSYGY 69
+GY +PP S +P + + PP +YG PP + HP S Y
Sbjct: 87 YGYGAPPPSQSYGAPPPSQSHGSHPP-------------SSYGAPPPSQSHGSHPPSQSY 227
Query: 70 DFFPESDSVSKPYGYSGLASEDSFWYDQWPPTS-SKPSLAEPQPCFPDLNSMGLASEDSF 128
P S S YG A S Y PPTS +PS P EDS
Sbjct: 228 GAPPPSQS----YG----APPPSQSYGAPPPTSYGQPSAPYAAP------YQKPPKEDS- 362
Query: 129 GYEQWLSASSKPSLGEAQPYFPSYIPSTIPSPTS-SVAAPIHWSSSSGFAPLD 180
+ ++ P A P F S +PST P T S+ A + G +D
Sbjct: 363 -HSSGGGGATYPPPAYASP-FASLVPSTFPPGTDPSIVACFQVADQDGSGLID 515
>TC87476 homologue to PIR|T11622|T11622 extensin class 1 precursor - cowpea,
partial (48%)
Length = 939
Score = 33.9 bits (76), Expect = 0.064
Identities = 29/104 (27%), Positives = 34/104 (31%), Gaps = 6/104 (5%)
Frame = +3
Query: 13 YSPPQPHSTLSPYAAAFSVNRPPFNDVSAPFV-DSDEPAYGVPPNPVHYPVHPRSYGYDF 71
Y P P S P + PP P+V S P PP P +Y P
Sbjct: 402 YKSPPPPSPSPPPPYVYKSPPPPSPSPPPPYVYKSPPPPSASPPPPYYYKSPP------- 560
Query: 72 FPESDSVSKPYGYS-----GLASEDSFWYDQWPPTSSKPSLAEP 110
P S S PYGY + + Y PP S P P
Sbjct: 561 -PPSPSPPPPYGYKSPPPPSPSPPPPYIYKSPPPPSPSPPPYHP 689
Score = 32.3 bits (72), Expect = 0.19
Identities = 44/173 (25%), Positives = 57/173 (32%), Gaps = 4/173 (2%)
Frame = +2
Query: 13 YSPPQPHSTLSPYAAAFSVNRPPFNDVSAPFV-DSDEPAYGVPPNPVHYPVHPRSYGYDF 71
Y P P S P + PP P+V S P PP P Y P
Sbjct: 17 YKSPPPPSPSPPPPYVYKSPPPPSPSPPPPYVYKSPPPPSPSPPPPYVYKSPP------- 175
Query: 72 FPESDSVSKPYGYSGLASEDSFWYDQWPPTSSKPS---LAEPQPCFPDLNSMGLASEDSF 128
P + S PY Y PP+ S P P P P + +
Sbjct: 176 -PPTPSPPPPYIYKSPP----------PPSPSPPPPYVYKSPPPPSP-------SPPPPY 301
Query: 129 GYEQWLSASSKPSLGEAQPYFPSYIPSTIPSPTSSVAAPIHWSSSSGFAPLDV 181
Y+ + PS PY P+TIP T+S+ + SSS F P +
Sbjct: 302 VYK----SPPPPSPSPPPPYIYKSPPTTIPFTTTSICL*VP-SSSFSFTPSSI 445
Score = 30.8 bits (68), Expect = 0.54
Identities = 17/56 (30%), Positives = 21/56 (37%)
Frame = +3
Query: 12 YYSPPQPHSTLSPYAAAFSVNRPPFNDVSAPFVDSDEPAYGVPPNPVHYPVHPRSY 67
YY P P S P + PP P++ P PP+P P HP Y
Sbjct: 543 YYKSPPPPSPSPPPPYGYKSPPPPSPSPPPPYIYKSPP----PPSPSPPPYHPYLY 698
>TC78214 similar to SP|P39869|NIA_LOTJA Nitrate reductase (EC 1.6.6.1) (NR).
{Lotus japonicus}, partial (65%)
Length = 2021
Score = 33.1 bits (74), Expect = 0.11
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
Frame = -3
Query: 53 VPPNPVHYPVHPRS--YGYDFFPESDSVSKPYGY--SGLASEDSFWYDQWPPTSSKPSLA 108
+P +H+P H +S Y Y P ++ + SGL + +F +D W P+ S L
Sbjct: 1620 IPTLLLHFPQHTKS*TYHYKSLPTHPTLPSTIYHPPSGLHKQHTFQFDHWHPSKSSSPLD 1441
Query: 109 EP 110
+P
Sbjct: 1440 KP 1435
>TC85413 similar to PIR|S23737|S23737 proline-rich protein precursor -
kidney bean, partial (56%)
Length = 1139
Score = 33.1 bits (74), Expect = 0.11
Identities = 19/50 (38%), Positives = 23/50 (46%)
Frame = +1
Query: 15 PPQPHSTLSPYAAAFSVNRPPFNDVSAPFVDSDEPAYGVPPNPVHYPVHP 64
PP P +P A A PP V P V + P + PP P H P+HP
Sbjct: 343 PPAPTPVHTPVAPAHPPLHPP---VHTPVVPTHPPLH--PPAPAHPPLHP 477
>TC85412 homologue to GP|15450763|gb|AAK96653.1 elongation factor EF-2
{Arabidopsis thaliana}, complete
Length = 3229
Score = 33.1 bits (74), Expect = 0.11
Identities = 19/50 (38%), Positives = 23/50 (46%)
Frame = +1
Query: 15 PPQPHSTLSPYAAAFSVNRPPFNDVSAPFVDSDEPAYGVPPNPVHYPVHP 64
PP P +P A A PP V P V + P + PP P H P+HP
Sbjct: 2941 PPAPTPVHTPVAPAHPPLHPP---VHTPVVPTHPPLH--PPAPAHPPLHP 3075
>TC76445 similar to PIR|T07623|T07623 extensin homolog HRGP2 - soybean
(fragment), partial (76%)
Length = 821
Score = 32.3 bits (72), Expect = 0.19
Identities = 28/102 (27%), Positives = 32/102 (30%), Gaps = 8/102 (7%)
Frame = +2
Query: 12 YYSPPQPHSTLSPYAAAFSVNRPPFNDVSAP-FVDSDEPAYGVPPNPVHY-------PVH 63
YY P P S P + PP P + S P PP P +Y P
Sbjct: 23 YYKSPPPPSPSPPSPYYYKSPPPPSPSPPPPYYYKSPPPPSPSPPPPYYYKSPPPPSPSP 202
Query: 64 PRSYGYDFFPESDSVSKPYGYSGLASEDSFWYDQWPPTSSKP 105
P Y Y P +S P Y Y PP S P
Sbjct: 203 PPPYHYQSPPPPSPISHPPNY----------YKSPPPPSPSP 298
Score = 29.6 bits (65), Expect = 1.2
Identities = 28/99 (28%), Positives = 37/99 (37%), Gaps = 7/99 (7%)
Frame = +2
Query: 14 SPPQPHSTLSPYAAAFSVNRPPFNDVSAPFVDSDEPAYGVPPNPVHYPVHPRSYGYDF-F 72
SPP P+ SP + S P + P S P Y P P P Y Y
Sbjct: 5 SPPPPYYYKSPPPPSPSPPSPYYYKSPPPPSPSPPPPYYYKSPPPPSPSPPPPYYYKSPP 184
Query: 73 PESDSVSKPYGY------SGLASEDSFWYDQWPPTSSKP 105
P S S PY Y S ++ +++ PP+ S P
Sbjct: 185 PPSPSPPPPYHYQSPPPPSPISHPPNYYKSPPPPSPSPP 301
Score = 27.3 bits (59), Expect = 6.0
Identities = 19/55 (34%), Positives = 23/55 (41%), Gaps = 2/55 (3%)
Frame = +2
Query: 12 YYSPPQPHSTLSPYAAAFSVNRPPFNDVSAP--FVDSDEPAYGVPPNPVHYPVHP 64
YY P P S SP + PP + +S P + S P PP P HY P
Sbjct: 167 YYKSPPPPSP-SPPPPYHYQSPPPPSPISHPPNYYKSPPPPSPSPPPPYHYVSPP 328
>TC88879 weakly similar to PIR|T04011|T04011 hypothetical protein T5L19.200
- Arabidopsis thaliana, partial (6%)
Length = 1573
Score = 32.3 bits (72), Expect = 0.19
Identities = 41/138 (29%), Positives = 54/138 (38%)
Frame = +3
Query: 10 WGYYSPPQPHSTLSPYAAAFSVNRPPFNDVSAPFVDSDEPAYGVPPNPVHYPVHPRSYGY 69
+G +S PQP P A+A + PP P P YGVPP+ HP+SYG+
Sbjct: 678 YGGHSNPQP---TYPQASAQANYAPP-QQYGKP------PLYGVPPSQGQ---HPQSYGH 818
Query: 70 DFFPESDSVSKPYGYSGLASEDSFWYDQWPPTSSKPSLAEPQPCFPDLNSMGLASEDSFG 129
+ + PY A +P SS PS Q +P S A D +
Sbjct: 819 PRATQPGEI--PYQGPTPAQSYGTVQQPYPYASSGPS----QAAYPTYGSAPAA--DGYS 974
Query: 130 YEQWLSASSKPSLGEAQP 147
+ Q S P AQP
Sbjct: 975 HPQ-----SAPGQVYAQP 1013
>TC77148 ENOD20
Length = 1108
Score = 32.0 bits (71), Expect = 0.24
Identities = 35/108 (32%), Positives = 44/108 (40%), Gaps = 2/108 (1%)
Frame = +3
Query: 99 PPTSSKPSLAEPQPC-FPDLNSMGLASEDSFGYEQWLS-ASSKPSLGEAQPYFPSYIPST 156
PP S PS P P P + + + S AS PS ++ PS PS
Sbjct: 480 PPRRSLPSPPSPSPSPSPSPSPSPSPRSTPIPHPRKRSPASPSPSPSLSKSPSPSESPSL 659
Query: 157 IPSPTSSVAAPIHWSSSSGFAPLDVVPSFGDYAAENSSEFGFSGLGAG 204
PSP+ SVA S + +P D PS A + S G G GAG
Sbjct: 660 APSPSDSVA-----SLAPSSSPSDESPS----PAPSPSSSGSKGGGAG 776
>BF642399 similar to PIR|T10863|T10 extensin precursor - kidney bean, partial
(33%)
Length = 653
Score = 31.6 bits (70), Expect = 0.32
Identities = 30/112 (26%), Positives = 39/112 (34%), Gaps = 2/112 (1%)
Frame = +3
Query: 6 SYNDWGYYSPPQPHSTLSPYAAAFSVNRPP--FNDVSAPFVDSDEPAYGVPPNPVHYPVH 63
S N + Y SPP P ++ V+ PP ++ S P Y PP PV+
Sbjct: 81 SANSYIYSSPPPPPKPYYYHSPPPPVHSPPPPYHYSSPPPPPKKPYKYASPPPPVYKYKS 260
Query: 64 PRSYGYDFFPESDSVSKPYGYSGLASEDSFWYDQWPPTSSKPSLAEPQPCFP 115
P Y + KPY Y + Y PP K P P P
Sbjct: 261 PPPPVYKYKSPPPPPKKPYKYPS-PPPPVYKYKSPPPPVYKYKSPPPPPKKP 413
>TC76326 homologue to PIR|C29356|C29356 hydroxyproline-rich glycoprotein
(clone Hyp2.13) - kidney bean (fragment), partial (32%)
Length = 777
Score = 31.6 bits (70), Expect = 0.32
Identities = 26/82 (31%), Positives = 29/82 (34%), Gaps = 9/82 (10%)
Frame = +1
Query: 12 YYSPPQPHSTLSPYAAAFSVNRPPFNDVSAP-FVDSDEPAYGVPPNPVHY-------PV- 62
YY P P S P + PP P + S P PP P HY P+
Sbjct: 46 YYKSPPPPSPSPPPPYYYKSPPPPSPSPPPPYYYKSPPPPSPSPPPPYHYQSPPPPSPIS 225
Query: 63 HPRSYGYDFFPESDSVSKPYGY 84
HP Y P S S PY Y
Sbjct: 226 HPPYYYKSPPPPSPSPPPPYHY 291
Score = 30.4 bits (67), Expect = 0.70
Identities = 25/92 (27%), Positives = 31/92 (33%)
Frame = +1
Query: 14 SPPQPHSTLSPYAAAFSVNRPPFNDVSAPFVDSDEPAYGVPPNPVHYPVHPRSYGYDFFP 73
SPP P+ SP + S P + P S P Y P P P Y Y P
Sbjct: 28 SPPPPYYYKSPPPPSPSPPPPYYYKSPPPPSPSPPPPYYYKSPPPPSPSPPPPYHYQSPP 207
Query: 74 ESDSVSKPYGYSGLASEDSFWYDQWPPTSSKP 105
+S P ++Y PP S P
Sbjct: 208 PPSPISHP----------PYYYKSPPPPSPSP 273
Score = 27.3 bits (59), Expect = 6.0
Identities = 19/55 (34%), Positives = 23/55 (41%), Gaps = 2/55 (3%)
Frame = +1
Query: 12 YYSPPQPHSTLSPYAAAFSVNRPPFNDVSAP--FVDSDEPAYGVPPNPVHYPVHP 64
YY P P S SP + PP + +S P + S P PP P HY P
Sbjct: 142 YYKSPPPPSP-SPPPPYHYQSPPPPSPISHPPYYYKSPPPPSPSPPPPYHYVSPP 303
>TC87122 weakly similar to GP|19911203|dbj|BAB86928. glucosyltransferase-10
{Vigna angularis}, partial (41%)
Length = 1588
Score = 31.2 bits (69), Expect = 0.41
Identities = 26/87 (29%), Positives = 37/87 (41%), Gaps = 3/87 (3%)
Frame = +2
Query: 56 NPVHYPVHPRSYGYDFFPESDSVSKPYGYSGLASEDSF---WYDQWPPTSSKPSLAEPQP 112
NP Y + P + + FPE ++ K G S L D W DQW P+S
Sbjct: 839 NPNIYNIGPLQFLANNFPEKENGFKSNG-SSLWKNDLTCIKWLDQWEPSS---------V 988
Query: 113 CFPDLNSMGLASEDSFGYEQWLSASSK 139
+ + S+ + SE F W A+SK
Sbjct: 989 IYINYGSIAVMSEKHFNEFAWGLANSK 1069
>TC80054 SP|Q28009|FUS_BOVIN RNA-binding protein FUS (Pigpen protein).
[Bovine] {Bos taurus}, partial (4%)
Length = 988
Score = 31.2 bits (69), Expect = 0.41
Identities = 31/127 (24%), Positives = 47/127 (36%), Gaps = 4/127 (3%)
Frame = +1
Query: 30 SVNRPPFNDVSAPFVDSDEPAYGVPP-NPVHYPVHPRS---YGYDFFPESDSVSKPYGYS 85
S +P N P + +P+YGVPP + Y P++ YG + YG S
Sbjct: 352 SSQQPSPNAAKYPPQGAAQPSYGVPPTSQTAYGSQPQTQSGYGPPQTQKPSGTPPAYGQS 531
Query: 86 GLASEDSFWYDQWPPTSSKPSLAEPQPCFPDLNSMGLASEDSFGYEQWLSASSKPSLGEA 145
+ + P S P QP +P + + GY Q + + S G
Sbjct: 532 QSPNAAGGYGQPGYPPSQPPPSGYSQPGYPP-SQPPPSGYSQPGYGQAPQSYNSGSYGAG 708
Query: 146 QPYFPSY 152
P P+Y
Sbjct: 709 YPQAPAY 729
>TC76311 homologue to GP|3204132|emb|CAA07235.1 extensin {Cicer arietinum},
partial (77%)
Length = 973
Score = 31.2 bits (69), Expect = 0.41
Identities = 39/163 (23%), Positives = 53/163 (31%), Gaps = 5/163 (3%)
Frame = +2
Query: 12 YYSPPQPHSTLSPYAAAFSVNRPPFNDVSAP-FVDSDEPAYGVPPNPVHYPVHPRSYGYD 70
YY P P S P + PP P + S P PP P +Y P
Sbjct: 32 YYHSPPPPSPSPPPPYYYKSPPPPSPSPPPPYYYKSPPPPSPSPPPPYYYQSPP------ 193
Query: 71 FFPESDSVSKPYGYSGLASEDSFWYDQWPPTSSKPS----LAEPQPCFPDLNSMGLASED 126
P S + PY Y PPT+S P ++ P P +S
Sbjct: 194 --PPSPTPHTPYHYKSPP----------PPTASPPPPYHYVSPPPP---------TSSPP 310
Query: 127 SFGYEQWLSASSKPSLGEAQPYFPSYIPSTIPSPTSSVAAPIH 169
+ Y S P+ P+YI + P P S P++
Sbjct: 311 PYHYTSPPPPSPAPA--------PTYIYKSPPPPMKSPPPPVY 415
>TC76563 homologue to PIR|C29356|C29356 hydroxyproline-rich glycoprotein
(clone Hyp2.13) - kidney bean (fragment), partial (34%)
Length = 507
Score = 30.8 bits (68), Expect = 0.54
Identities = 27/100 (27%), Positives = 33/100 (33%), Gaps = 6/100 (6%)
Frame = +2
Query: 12 YYSPPQPHSTLSPYAAAFSVNRPPFNDVSAP-FVDSDEPAYGVPPNPVHYPVHPRSYGYD 70
YY P P S P + PP P + S P PP P +Y P
Sbjct: 146 YYKSPPPPSPSPPPPYYYKSPPPPSPIPKTPYYYKSPPPPSPSPPPPYYYKSPP------ 307
Query: 71 FFPESDSVSKPYGYS-----GLASEDSFWYDQWPPTSSKP 105
P S S PY Y + ++Y PP S P
Sbjct: 308 --PPSPSPPPPYYYKSPPPPSPSPPPPYYYKSPPPPSPSP 421
Score = 28.1 bits (61), Expect = 3.5
Identities = 22/74 (29%), Positives = 25/74 (33%), Gaps = 1/74 (1%)
Frame = +2
Query: 12 YYSPPQPHSTLSPYAAAFSVNRPPFNDVSAP-FVDSDEPAYGVPPNPVHYPVHPRSYGYD 70
YY P P S P + PP P + S P PP P +Y P
Sbjct: 242 YYKSPPPPSPSPPPPYYYKSPPPPSPSPPPPYYYKSPPPPSPSPPPPYYYKSPP------ 403
Query: 71 FFPESDSVSKPYGY 84
P S S PY Y
Sbjct: 404 --PPSPSPPPPYYY 439
>TC90952 similar to GP|15724316|gb|AAL06551.1 AT4g34150/F28A23_90
{Arabidopsis thaliana}, partial (49%)
Length = 1046
Score = 30.8 bits (68), Expect = 0.54
Identities = 25/91 (27%), Positives = 37/91 (40%), Gaps = 4/91 (4%)
Frame = +2
Query: 100 PTSSKPSLAEPQPCFPDLNSMGLASEDSFGYEQWLSASSKPSLGEAQPYFPSYIPSTIPS 159
PT+ + +P P N ++ Y Q +S S P + PY PS +PS P
Sbjct: 482 PTTPAVAYPQPPPYPASHNPSSYPPSSTYPYPQSVS-SPYPPPSSSSPY-PSSVPSPYPP 655
Query: 160 PTSSVAAPI----HWSSSSGFAPLDVVPSFG 186
+SS +P + SS + P P G
Sbjct: 656 TSSSSPSPYPPPHSYPPSSAYPPPSYPPPAG 748
Score = 28.5 bits (62), Expect = 2.7
Identities = 21/58 (36%), Positives = 24/58 (41%)
Frame = +2
Query: 15 PPQPHSTLSPYAAAFSVNRPPFNDVSAPFVDSDEPAYGVPPNPVHYPVHPRSYGYDFF 72
PP S+ SPY S PP + P S P G PPN YP P + Y F
Sbjct: 650 PPTSSSSPSPYPPPHSY--PPSSAYPPP---SYPPPAGYPPNTGFYPPPPY*HRYATF 808
>TC85816 similar to GP|15021744|gb|AAK77899.1 root nodule extensin {Pisum
sativum}, partial (32%)
Length = 603
Score = 30.4 bits (67), Expect = 0.70
Identities = 19/54 (35%), Positives = 22/54 (40%)
Frame = +3
Query: 6 SYNDWGYYSPPQPHSTLSPYAAAFSVNRPPFNDVSAPFVDSDEPAYGVPPNPVH 59
S N + Y SPP PH + P PP P +P Y PP PVH
Sbjct: 81 SANKYAYSSPPPPHYSSPP---------PP------PVHTYPKPVYHSPPPPVH 197
>BE998536 similar to GP|2598593|emb| MtN12 {Medicago truncatula}, partial
(64%)
Length = 448
Score = 30.4 bits (67), Expect = 0.70
Identities = 18/49 (36%), Positives = 21/49 (42%)
Frame = +3
Query: 11 GYYSPPQPHSTLSPYAAAFSVNRPPFNDVSAPFVDSDEPAYGVPPNPVH 59
GY+SPP P T P+ + PP S P D Y PP P H
Sbjct: 168 GYHSPPPPGHTYPPHGPHPGYHSPPAPVDSPPTPDY---YYKSPPPPYH 305
Score = 28.9 bits (63), Expect = 2.0
Identities = 30/99 (30%), Positives = 36/99 (36%), Gaps = 11/99 (11%)
Frame = +3
Query: 13 YSPPQPHSTLSPYAAAFSVNRPPFNDVSAPFVDSDEPAYGVPPNPVH-YPVHPRSYGYDF 71
Y P HS P S AP +P Y PP PVH Y HP+ GY
Sbjct: 3 YLEPDYHSAAPPVDTLPSP*TQSTTLHHAPVHTYPKPVYHWPPPPVHTYVPHPKP-GYHS 179
Query: 72 FPESDSVSKPYG-----YSGLASEDS-----FWYDQWPP 100
P P+G +S A DS ++Y PP
Sbjct: 180 PPPPGHTYPPHGPHPGYHSPPAPVDSPPTPDYYYKSPPP 296
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.312 0.132 0.413
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,871,470
Number of Sequences: 36976
Number of extensions: 176165
Number of successful extensions: 1133
Number of sequences better than 10.0: 88
Number of HSP's better than 10.0 without gapping: 1035
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1092
length of query: 258
length of database: 9,014,727
effective HSP length: 94
effective length of query: 164
effective length of database: 5,538,983
effective search space: 908393212
effective search space used: 908393212
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 57 (26.6 bits)
Lotus: description of TM0207.8