TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0195a.7
         (69 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC81167 similar to SP|Q9SFC6|GDIR_ARATH Rho GDP-dissociation inh...   127  6e-31
TC93892 similar to SP|Q9SFC6|GDIR_ARATH Rho GDP-dissociation inh...   117  7e-28
TC79004 similar to GP|7228160|emb|CAB77025.1 putative Rho GDP di...    78  7e-16
AL385054 weakly similar to GP|14278159|pdb Chain A  Crystal Stru...    75  6e-15
TC91304 similar to GP|21592923|gb|AAM64873.1 induced upon woundi...    25  5.7
TC81351 similar to PIR|T00579|T00579 probable laccase [imported]...    25  5.7
AL372966                                                               24  9.8

>TC81167 similar to SP|Q9SFC6|GDIR_ARATH Rho GDP-dissociation inhibitor 1
           (Rho GDI-1). [Mouse-ear cress] {Arabidopsis thaliana},
           partial (77%)
          Length = 1343

 Score =  127 bits (320), Expect = 6e-31
 Identities = 58/66 (87%), Positives = 63/66 (94%)
 Frame = +3

Query: 4   VTVDSSKEMIGTFSPQTDPYTHEMPDETTPSGIFARRAYSARSKFVDDDNKCYLEIDYTF 63
           + VDSSKEMIGTFSPQT+ YTHEMP+ETTPSG+FAR AYSARSKFVDDDNKCYLEI+YTF
Sbjct: 765 IKVDSSKEMIGTFSPQTETYTHEMPEETTPSGMFARGAYSARSKFVDDDNKCYLEINYTF 944

Query: 64  DIRKDW 69
           DIRKDW
Sbjct: 945 DIRKDW 962


>TC93892 similar to SP|Q9SFC6|GDIR_ARATH Rho GDP-dissociation inhibitor 1
          (Rho GDI-1). [Mouse-ear cress] {Arabidopsis thaliana},
          partial (28%)
          Length = 441

 Score =  117 bits (294), Expect = 7e-28
 Identities = 52/66 (78%), Positives = 59/66 (88%)
 Frame = +2

Query: 4  VTVDSSKEMIGTFSPQTDPYTHEMPDETTPSGIFARRAYSARSKFVDDDNKCYLEIDYTF 63
          + VDS+KEMIGTFSPQ +PYTHEMP+ETTPSG+FAR  YSAR+KFVDDD K YL+I YTF
Sbjct: 11 IKVDSTKEMIGTFSPQAEPYTHEMPEETTPSGLFARGTYSARTKFVDDDKKSYLDISYTF 190

Query: 64 DIRKDW 69
          DIRKDW
Sbjct: 191DIRKDW 208


>TC79004 similar to GP|7228160|emb|CAB77025.1 putative Rho GDP dissociation
           inhibitor {Nicotiana tabacum}, partial (76%)
          Length = 1015

 Score = 77.8 bits (190), Expect = 7e-16
 Identities = 32/62 (51%), Positives = 46/62 (73%)
 Frame = +1

Query: 6   VDSSKEMIGTFSPQTDPYTHEMPDETTPSGIFARRAYSARSKFVDDDNKCYLEIDYTFDI 65
           VD SK M+GTF+PQ  PY + + ++TTP+G  AR  YSA+ KF DDD +C++E+ Y F+I
Sbjct: 580 VDQSKGMLGTFAPQKGPYVYALKEDTTPAGALARGVYSAKLKFEDDDKRCHMELKYLFEI 759

Query: 66  RK 67
           +K
Sbjct: 760 KK 765


>AL385054 weakly similar to GP|14278159|pdb Chain A  Crystal Structure Of
           Truncated Human Rhogdi Quadruple Mutant, partial (45%)
          Length = 337

 Score = 74.7 bits (182), Expect = 6e-15
 Identities = 31/66 (46%), Positives = 46/66 (68%)
 Frame = +3

Query: 4   VTVDSSKEMIGTFSPQTDPYTHEMPDETTPSGIFARRAYSARSKFVDDDNKCYLEIDYTF 63
           + VD ++EMIG++ P  +PY  +   E  PSG+ AR  Y A+SKF+DDDN  ++E  ++F
Sbjct: 48  IRVDKTEEMIGSYGPNIEPYEKKFMVEEAPSGMLARGHYDAKSKFIDDDNVTHIEWSWSF 227

Query: 64  DIRKDW 69
           DI+KDW
Sbjct: 228 DIKKDW 245


>TC91304 similar to GP|21592923|gb|AAM64873.1 induced upon wounding stress
           {Arabidopsis thaliana}, partial (32%)
          Length = 689

 Score = 25.0 bits (53), Expect = 5.7
 Identities = 9/24 (37%), Positives = 14/24 (57%)
 Frame = +3

Query: 11  EMIGTFSPQTDPYTHEMPDETTPS 34
           E+IG   P   P+T ++P   TP+
Sbjct: 531 EIIGKIKPHESPFTEDVPRLDTPN 602


>TC81351 similar to PIR|T00579|T00579 probable laccase [imported] -
           Arabidopsis thaliana, partial (27%)
          Length = 765

 Score = 25.0 bits (53), Expect = 5.7
 Identities = 12/28 (42%), Positives = 15/28 (52%)
 Frame = +3

Query: 2   HFVTVDSSKEMIGTFSPQTDPYTHEMPD 29
           HF  V S     G F+P+TDP T  + D
Sbjct: 243 HFFVVGSG---FGNFNPRTDPATFNLVD 317


>AL372966 
          Length = 313

 Score = 24.3 bits (51), Expect = 9.8
 Identities = 10/19 (52%), Positives = 13/19 (67%)
 Frame = -2

Query: 15  TFSPQTDPYTHEMPDETTP 33
           T SPQT P + E+P  T+P
Sbjct: 312 TASPQTTPRSLELPARTSP 256


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.318    0.135    0.420 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,813,205
Number of Sequences: 36976
Number of extensions: 16442
Number of successful extensions: 96
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 96
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 96
length of query: 69
length of database: 9,014,727
effective HSP length: 45
effective length of query: 24
effective length of database: 7,350,807
effective search space: 176419368
effective search space used: 176419368
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 51 (24.3 bits)