TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0192.7
         (263 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

BG647389                                                               66  1e-19
BE999414                                                               59  1e-09
BG644741                                                               30  0.73
TC80288 weakly similar to PIR|T06029|T06029 hypothetical protein...    29  1.6
BE941219 weakly similar to GP|10177251|db receptor protein kinas...    29  1.6
TC88017 similar to GP|15081777|gb|AAK82543.1 AT5g15220/F8M21_110...    29  2.1
BQ137174                                                               28  4.7
TC78718 similar to SP|O80961|ML12_ARATH MLO-like protein 12 (AtM...    27  8.0

>BG647389 
          Length = 718

 Score = 66.2 bits (160), Expect(2) = 1e-19
 Identities = 32/85 (37%), Positives = 54/85 (62%)
 Frame = +1

Query: 69  KSTAMAWFTTLPRGSISNFRDFSSKFLVQFSANKNQPVTINDLYSIRQQEGESLKEYVAR 128
           K     W+  LPR SI+ +++ + K + QFSA+K+  V+  +L+++RQ   ESL EY+  
Sbjct: 451 KEATQQWYMNLPRFSITGYQNMTHKLVHQFSASKHCKVSTTNLFNVRQDPNESLPEYLV* 630

Query: 129 YSAASVKVEDEEPRACALAFKNGLL 153
           ++ A++KV + +    A AF+NGLL
Sbjct: 631 FNNATIKVVNPKQELFAGAFQNGLL 705



 Score = 47.4 bits (111), Expect(2) = 1e-19
 Identities = 20/52 (38%), Positives = 34/52 (64%)
 Frame = +2

Query: 10  RPFSEDVESVAILDNMKALVLDSYSGDSDPKDHLLYFNTKMVIIAASDAVKC 61
           +P S D+ +  +L+N+K+L L S+   SDP +H   FNT+M +I A  +++C
Sbjct: 278 QPLSMDIWNAPVLENLKSLSLLSFDDKSDPVEHATTFNTQMAVIGALKSLRC 433


>BE999414 
          Length = 613

 Score = 59.3 bits (142), Expect = 1e-09
 Identities = 29/84 (34%), Positives = 45/84 (53%)
 Frame = +3

Query: 30  LDSYSGDSDPKDHLLYFNTKMVIIAASDAVKCRMFPSTFKSTAMAWFTTLPRGSISNFRD 89
           +DSY G  DP +H+      +   +   AVKC++F +T +  AM WF  L R SI ++ D
Sbjct: 9   MDSYDGT*DPDEHMENIEVVLTYRSVRGAVKCKLFVTTLRRGAMTWFKNLRRNSIGSWGD 188

Query: 90  FSSKFLVQFSANKNQPVTINDLYS 113
              +F   F+ ++ QP    DL+S
Sbjct: 189 LCHEFTTHFTVSRTQPKM--DLFS 254


>BG644741 
          Length = 735

 Score = 30.4 bits (67), Expect = 0.73
 Identities = 20/73 (27%), Positives = 33/73 (44%), Gaps = 3/73 (4%)
 Frame = -2

Query: 62  RMFPSTFKSTAMAWFTTLPRGSISNFRDFSSKFLVQF---SANKNQPVTINDLYSIRQQE 118
           R+FP +    A  WFT LP  SI  +      FL ++   S   N    +N+  ++    
Sbjct: 584 RVFPLSLMGEADIWFTELPYNSIFTWNQLRDVFLARYYPVSKKLNHNDRVNNFVAL---P 414

Query: 119 GESLKEYVARYSA 131
           GES+     R+++
Sbjct: 413 GESVSSSWDRFTS 375


>TC80288 weakly similar to PIR|T06029|T06029 hypothetical protein T28I19.100
           - Arabidopsis thaliana, partial (14%)
          Length = 1460

 Score = 29.3 bits (64), Expect = 1.6
 Identities = 14/39 (35%), Positives = 20/39 (50%)
 Frame = +3

Query: 182 DEEDDAFKRKRAKLEKGDTSPEQR*KEEFQIGGKAEGKE 220
           D ED+    ++ K E+GD   E   KE+ + GG  E  E
Sbjct: 678 DREDEVVDEEKDKEEEGDDETENEDKEDEEKGGLVENHE 794


>BE941219 weakly similar to GP|10177251|db receptor protein kinase-like
           protein {Arabidopsis thaliana}, partial (7%)
          Length = 586

 Score = 29.3 bits (64), Expect = 1.6
 Identities = 18/75 (24%), Positives = 31/75 (41%), Gaps = 5/75 (6%)
 Frame = -1

Query: 52  IIAASDAVKCRMFPSTFKSTAMAWFTTLPR-----GSISNFRDFSSKFLVQFSANKNQPV 106
           +  A++   C+MFP+TF  +   WF    R       +++  +   K L +     N  +
Sbjct: 340 LACATNCSNCKMFPNTFGISPEKWFAETTRDFRLVSLLNSLLNLPEKLLAESDNLSNDNI 161

Query: 107 TINDLYSIRQQEGES 121
             ND     + E ES
Sbjct: 160 EYNDSGKGPENELES 116


>TC88017 similar to GP|15081777|gb|AAK82543.1 AT5g15220/F8M21_110
           {Arabidopsis thaliana}, partial (68%)
          Length = 791

 Score = 28.9 bits (63), Expect = 2.1
 Identities = 18/67 (26%), Positives = 30/67 (43%), Gaps = 12/67 (17%)
 Frame = -3

Query: 41  DHLLYFNTKMVIIAASDAVKCRMFPSTFKS---------TAMAWF---TTLPRGSISNFR 88
           + + +    M  +A S  V  ++ PS F+S           ++W    TTLP   +S + 
Sbjct: 495 EDMTFLRLNMHPLATSQLVAFKLHPSLFQSKKSMIFPQSNIVSWMKTSTTLPNNDVSRYY 316

Query: 89  DFSSKFL 95
             S+KFL
Sbjct: 315 PLSTKFL 295


>BQ137174 
          Length = 977

 Score = 27.7 bits (60), Expect = 4.7
 Identities = 11/38 (28%), Positives = 21/38 (54%)
 Frame = -3

Query: 64  FPSTFKSTAMAWFTTLPRGSISNFRDFSSKFLVQFSAN 101
           +  T    +++WF TL  G + +  D  +KFL+  ++N
Sbjct: 240 YKGTESIESLSWFKTLGEGVVVSIHDAQNKFLLHDASN 127


>TC78718 similar to SP|O80961|ML12_ARATH MLO-like protein 12 (AtMlo12).
           [Mouse-ear cress] {Arabidopsis thaliana}, partial (42%)
          Length = 1625

 Score = 26.9 bits (58), Expect = 8.0
 Identities = 24/93 (25%), Positives = 42/93 (44%), Gaps = 7/93 (7%)
 Frame = +2

Query: 38  DPKDHLLYFNTKMVIIAASDAVKCRMFPSTFKSTAMAWFT-------TLPRGSISNFRDF 90
           +P DHL +FN+  +++     V   +F + F+    +W T          R +  N    
Sbjct: 662 EPGDHLFWFNSPNLLLFIIHLV---LFQNAFQLAFFSWSTYEFSINSCFHRTTADNVIRV 832

Query: 91  SSKFLVQFSANKNQPVTINDLYSIRQQEGESLK 123
           S   L+QF  +    VT+  LY++  Q G ++K
Sbjct: 833 SVGILIQFLCSY---VTL-PLYALVTQMGSTMK 919


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.320    0.134    0.373 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,363,520
Number of Sequences: 36976
Number of extensions: 56054
Number of successful extensions: 308
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 306
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 308
length of query: 263
length of database: 9,014,727
effective HSP length: 94
effective length of query: 169
effective length of database: 5,538,983
effective search space: 936088127
effective search space used: 936088127
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 57 (26.6 bits)