TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0191.15
         (398 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC87960 homologue to PIR|S39523|S39523 coproporphyrinogen oxidas...   637  0.0
TC88445 similar to GP|16648903|gb|AAL24303.1 alpha glucosidase-l...    31  0.74
AW697072 weakly similar to GP|17979155|gb| unknown protein {Arab...    24  2.0
TC83229                                                                30  2.1
BF634167                                                               29  2.8
AJ497613 similar to GP|7295919|gb| Pgk gene product {Drosophila ...    29  3.6
TC89110 weakly similar to GP|17064780|gb|AAL32544.1 Unknown prot...    28  6.2
TC76562 similar to PIR|T11622|T11622 extensin class 1 precursor ...    28  8.1
TC76512 similar to GP|4959932|gb|AAD34548.1| cystathionine-gamma...    28  8.1
TC81596 similar to GP|21039012|dbj|BAB92985. protein kinase {Ara...    28  8.1

>TC87960 homologue to PIR|S39523|S39523 coproporphyrinogen oxidase (EC
           1.3.3.3) precursor - soybean, partial (84%)
          Length = 1581

 Score =  637 bits (1643), Expect = 0.0
 Identities = 313/389 (80%), Positives = 336/389 (85%), Gaps = 4/389 (1%)
 Frame = +3

Query: 4   CATIVSPPSYAI-PFFTSTSSTSSPTAKLLSKRRWNPLIQTKTMTSLG--SKGAVRAGVS 60
           C   +S PSY+I PFFT TSS S+  + +      +   QT+  TS     +   +A VS
Sbjct: 132 CTISISAPSYSITPFFTFTSSKSTQISHISHTPPKSLTTQTRKTTSSHHFQRLITKATVS 311

Query: 61  IEKETPEAERPETFLRGGDTAEALSSSSSVRARFEKMIREAQDSVCDAIEAADGGAKFKE 120
           IEKETPE+ERP+TFLRG D   A  ++SSVRARFEKMIREAQD VC+AIE ADGG KFKE
Sbjct: 312 IEKETPESERPDTFLRGVDNDGA--TASSVRARFEKMIREAQDKVCNAIEQADGGGKFKE 485

Query: 121 DVWSRPGGGGGISRVLQDGAVWEKAGVNVSVVYGVMPPDAYRAAKG-AAASPDEKPGPVP 179
           DVWSRPGGGGGISRVLQDGAVWEKAGVNVSVVYG MPPDAYRAAKG AAAS D+KPGP+P
Sbjct: 486 DVWSRPGGGGGISRVLQDGAVWEKAGVNVSVVYGQMPPDAYRAAKGAAAASSDQKPGPIP 665

Query: 180 FFAAGISSVLHPKNPFAPTMHFNYRYFETDAPKDAPGAPKQWWFGGGTDLTPAYIFEEDV 239
           FFAAGISSVLHPKNPFAPT+HFNYRYFETDAPKDAPGAP+QWWFGGGTDLTPAYIFEEDV
Sbjct: 666 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDAPGAPRQWWFGGGTDLTPAYIFEEDV 845

Query: 240 KHFHSIQKQACDKFDPTFYPRFKKWCDDYFYIKHRGERRGLGGIFFDDLNDYDQEMLLSF 299
           KHFHS+QKQACDKFDPTFYPRFKKWCDDYFYIKHR ERRGLGGIFFDDLNDYDQEMLLSF
Sbjct: 846 KHFHSVQKQACDKFDPTFYPRFKKWCDDYFYIKHRDERRGLGGIFFDDLNDYDQEMLLSF 1025

Query: 300 ATECANSVVPSYIPIIEKRKDTPFTDHQKAWQQLRRGRYVEFNLVYDRGTTFGLKTGGRI 359
           ATECANSV+P+YIPIIEKRKD PFTDHQKAWQQLRRGRYVEFNLVYDRGTTFGLKTGGRI
Sbjct: 1026ATECANSVIPAYIPIIEKRKDLPFTDHQKAWQQLRRGRYVEFNLVYDRGTTFGLKTGGRI 1205

Query: 360 ESILVSLPLTSRWEYDHKPEEGSEEWKLL 388
           ESIL SLPLT+RWEYDHKP       + L
Sbjct: 1206ESILGSLPLTARWEYDHKPRSRKRRMETL 1292



 Score = 39.3 bits (90), Expect = 0.003
 Identities = 16/17 (94%), Positives = 16/17 (94%)
 Frame = +1

Query: 378  PEEGSEEWKLLDACINP 394
            PE GSEEWKLLDACINP
Sbjct: 1261 PEVGSEEWKLLDACINP 1311


>TC88445 similar to GP|16648903|gb|AAL24303.1 alpha glucosidase-like protein
           {Arabidopsis thaliana}, partial (31%)
          Length = 1077

 Score = 31.2 bits (69), Expect = 0.74
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = -2

Query: 155 VMPPDAYRAAKGAAASPDEKPGPVPF 180
           + PP  Y+A K   ASP  KP  +PF
Sbjct: 572 IEPPFKYKAGKSGCASPKSKPNHIPF 495


>AW697072 weakly similar to GP|17979155|gb| unknown protein {Arabidopsis
           thaliana}, partial (21%)
          Length = 739

 Score = 24.3 bits (51), Expect(2) = 2.0
 Identities = 14/37 (37%), Positives = 19/37 (50%), Gaps = 1/37 (2%)
 Frame = -1

Query: 162 RAAKGA-AASPDEKPGPVPFFAAGISSVLHPKNPFAP 197
           RAA+ A    P + P P+P   A   S   PK+ F+P
Sbjct: 559 RAARVAHPLQPRQPPAPLPSQLASPPSSTRPKDTFSP 449



 Score = 23.9 bits (50), Expect(2) = 2.0
 Identities = 15/51 (29%), Positives = 20/51 (38%)
 Frame = -2

Query: 191 PKNPFAPTMHFNYRYFETDAPKDAPGAPKQWWFGGGTDLTPAYIFEEDVKH 241
           P+ PF PT HF +      +P   P        GGG  +    I  +  KH
Sbjct: 468 PRTPFPPTQHFTHL-----SPPQGP-VILSHTLGGGIHVVHCQIHLQCAKH 334


>TC83229 
          Length = 692

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 20/73 (27%), Positives = 26/73 (35%)
 Frame = +1

Query: 160 AYRAAKGAAASPDEKPGPVPFFAAGISSVLHPKNPFAPTMHFNYRYFETDAPKDAPGAPK 219
           +Y AA G +  P   P P P    G     H  N    + +FN       AP+     P 
Sbjct: 91  SYPAASGPSYQPPRTPPPPPTSNVGYPPNFHQSNNGLASSYFNMPSSSGTAPRQR--GPP 264

Query: 220 QWWFGGGTDLTPA 232
            +  G G    PA
Sbjct: 265 GFAMGAGAGALPA 303


>BF634167 
          Length = 221

 Score = 29.3 bits (64), Expect = 2.8
 Identities = 20/76 (26%), Positives = 28/76 (36%)
 Frame = -2

Query: 157 PPDAYRAAKGAAASPDEKPGPVPFFAAGISSVLHPKNPFAPTMHFNYRYFETDAPKDAPG 216
           PPD    + G  A P  +  P P FA   + ++ P             +F    P+   G
Sbjct: 220 PPDVLATSPGQTAWPGCRACPSPAFACPPACLVAPAAS---------SFFLL*TPQGQAG 68

Query: 217 APKQWWFGGGTDLTPA 232
           + K WW G      PA
Sbjct: 67  SGKPWWSGSQMVQPPA 20


>AJ497613 similar to GP|7295919|gb| Pgk gene product {Drosophila
           melanogaster}, partial (41%)
          Length = 607

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -1

Query: 291 YDQEMLLSFATECANSVVPSYIPIIEKRKDTPF 323
           +    L  FA   +N+ VP +IP I  R+ TPF
Sbjct: 118 FSTNFLTIFAPSSSNNEVPIFIPFISFRRCTPF 20


>TC89110 weakly similar to GP|17064780|gb|AAL32544.1 Unknown protein
           {Arabidopsis thaliana}, partial (21%)
          Length = 706

 Score = 28.1 bits (61), Expect = 6.2
 Identities = 12/22 (54%), Positives = 15/22 (67%)
 Frame = +2

Query: 16  PFFTSTSSTSSPTAKLLSKRRW 37
           P F++TSS + P  K LS RRW
Sbjct: 263 PRFSTTSSLNQPEFKSLSSRRW 328


>TC76562 similar to PIR|T11622|T11622 extensin class 1 precursor - cowpea,
           partial (48%)
          Length = 1391

 Score = 27.7 bits (60), Expect = 8.1
 Identities = 25/116 (21%), Positives = 37/116 (31%), Gaps = 3/116 (2%)
 Frame = +2

Query: 158 PDAYRAAKGAAASPDEKPGPVPFFAAG---ISSVLHPKNPFAPTMHFNYRYFETDAPKDA 214
           P AY + K        KP P P++       S V    +P  P  +++  Y     P   
Sbjct: 656 PFAYASKKHFKECEKPKPSPTPYYYKSPPPPSPVYKYNSPPPPVHYYSPPYTYKSPPPPV 835

Query: 215 PGAPKQWWFGGGTDLTPAYIFEEDVKHFHSIQKQACDKFDPTFYPRFKKWCDDYFY 270
             AP  +++       P Y +       H        K  P   P  K     Y+Y
Sbjct: 836 KAAPTPYYYKSPPPPAPVYKYNSPPPPVHYYSPPYTYKSPP---PPVKAAPTPYYY 994


>TC76512 similar to GP|4959932|gb|AAD34548.1| cystathionine-gamma-synthase
           precursor {Glycine max}, partial (90%)
          Length = 2103

 Score = 27.7 bits (60), Expect = 8.1
 Identities = 17/57 (29%), Positives = 24/57 (41%), Gaps = 3/57 (5%)
 Frame = -2

Query: 101 AQDSVCDAIEAADG---GAKFKEDVWSRPGGGGGISRVLQDGAVWEKAGVNVSVVYG 154
           + D +C+   AA     GA+   ++W +   GGG       G  WE     V VV G
Sbjct: 308 SSDDLCNTDVAAVTTRFGAELTLEIWRKTEDGGGDGSCRGKGGCWEMTTAVVVVVVG 138


>TC81596 similar to GP|21039012|dbj|BAB92985. protein kinase {Arabidopsis
           thaliana}, partial (33%)
          Length = 692

 Score = 27.7 bits (60), Expect = 8.1
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = -2

Query: 322 PFTDHQKAWQQLRRGRYVEFNL 343
           P TDH + W Q RR RY +  L
Sbjct: 211 PCTDHNERWDQFRRIRYRDHRL 146


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.317    0.135    0.424 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,703,334
Number of Sequences: 36976
Number of extensions: 204450
Number of successful extensions: 1076
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1063
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1073
length of query: 398
length of database: 9,014,727
effective HSP length: 98
effective length of query: 300
effective length of database: 5,391,079
effective search space: 1617323700
effective search space used: 1617323700
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)