TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0190.5
         (331 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC80891 similar to GP|21622328|emb|CAD36969. probable isoamyl al...    29  2.2
TC85777 similar to PIR|F86442|F86442 unknown protein [imported] ...    28  4.9
TC88244 homologue to GP|7385201|gb|AAF61730.1| beta-ketoacyl-ACP...    28  6.4

>TC80891 similar to GP|21622328|emb|CAD36969. probable isoamyl alcohol
           oxidase {Neurospora crassa}, partial (12%)
          Length = 766

 Score = 29.3 bits (64), Expect = 2.2
 Identities = 22/76 (28%), Positives = 32/76 (41%), Gaps = 8/76 (10%)
 Frame = -2

Query: 263 PNRQKKIRRNRKNENERVRVCRMRSCSWERSKSSNKEGPEEVTTKGENRGKARTTV---- 318
           P+R+   R  R+N++      R RS  W R +   +      +     R  AR+T+    
Sbjct: 642 PSRRTARRFRRRNDHSAAG--RGRSSGWRRRRP*PRTTTGCASRSWPTRP*ARSTLPRQR 469

Query: 319 ----CPRLLSRWGRWR 330
               C    SRWGRWR
Sbjct: 468 RQRSCRGRRSRWGRWR 421


>TC85777 similar to PIR|F86442|F86442 unknown protein [imported] -
           Arabidopsis thaliana, partial (89%)
          Length = 2381

 Score = 28.1 bits (61), Expect = 4.9
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = -3

Query: 245 ISLVFPLCLALWVLAVTLPNRQKKIRRNRKNENER 279
           +SL   +C+  W L V       K+RR R+  NER
Sbjct: 120 LSLFCSVCVYQWCLNVEKTGEWWKVRRRRRRRNER 16


>TC88244 homologue to GP|7385201|gb|AAF61730.1| beta-ketoacyl-ACP synthetase I
            {Glycine max}, partial (89%)
          Length = 1768

 Score = 27.7 bits (60), Expect = 6.4
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = -1

Query: 92   SIDDVVRWSVPFLTVERTAVQEHSPGNQDLEAEK 125
            S++DV R     + ++ +  +E  PGNQ L+AEK
Sbjct: 1540 SLNDVERTKFQLI*IQCST*REDKPGNQGLKAEK 1439


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.320    0.136    0.420 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,073,695
Number of Sequences: 36976
Number of extensions: 149602
Number of successful extensions: 869
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 852
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 869
length of query: 331
length of database: 9,014,727
effective HSP length: 97
effective length of query: 234
effective length of database: 5,428,055
effective search space: 1270164870
effective search space used: 1270164870
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)