TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0180b.2
         (57 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC76713 similar to PIR|S33622|S33622 ADR6 protein - soybean, par...    25  4.7
BG644403 similar to GP|20259581|gb| unknown protein {Arabidopsis...    25  6.1
BQ137674 weakly similar to SP|Q05047|CP72 Cytochrome P450 72A1 (...    25  6.1
TC85530 similar to GP|13489167|gb|AAK27801.1 60S ribosomal prote...    25  8.0

>TC76713 similar to PIR|S33622|S33622 ADR6 protein - soybean, partial (67%)
          Length = 1790

 Score = 25.4 bits (54), Expect = 4.7
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = -1

Query: 21  WAAALQGHMMWLQRQDSFKHKFRNLDDD 48
           + AA+ GH + LQ+ D  +HK++ L D+
Sbjct: 773 FVAAIHGHGLLLQKLDIREHKWK*LCDE 690


>BG644403 similar to GP|20259581|gb| unknown protein {Arabidopsis thaliana},
           partial (16%)
          Length = 559

 Score = 25.0 bits (53), Expect = 6.1
 Identities = 14/37 (37%), Positives = 20/37 (53%), Gaps = 1/37 (2%)
 Frame = +3

Query: 18  LIAWAAALQGHMMWLQRQDSFKH-KFRNLDDDDRSDE 53
           L  WA  L G M   +R+   +H +F + DDDD + E
Sbjct: 144 LSLWAPILLGMMTNPRRRSRLRHLEFEDDDDDDHTRE 254


>BQ137674 weakly similar to SP|Q05047|CP72 Cytochrome P450 72A1 (EC
           1.14.14.1) (CYPLXXII) (Secologanin synthase) (SLS).,
           partial (24%)
          Length = 502

 Score = 25.0 bits (53), Expect = 6.1
 Identities = 11/25 (44%), Positives = 16/25 (64%), Gaps = 3/25 (12%)
 Frame = -2

Query: 21  WAAALQGHM---MWLQRQDSFKHKF 42
           W+ ALQ  +   + L RQDSF+H +
Sbjct: 129 WSLALQSRIACILLLHRQDSFRHPY 55


>TC85530 similar to GP|13489167|gb|AAK27801.1 60S ribosomal protein L21
           {Oryza sativa}, complete
          Length = 723

 Score = 24.6 bits (52), Expect = 8.0
 Identities = 12/27 (44%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
 Frame = +3

Query: 21  WAAALQGHMMWLQ--RQDSFKHKFRNL 45
           W   LQ HMMWL   R+D+    F N+
Sbjct: 510 WKLLLQFHMMWLMILREDTSHFIFPNV 590


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.322    0.133    0.433 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,078,822
Number of Sequences: 36976
Number of extensions: 21025
Number of successful extensions: 120
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 120
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 120
length of query: 57
length of database: 9,014,727
effective HSP length: 33
effective length of query: 24
effective length of database: 7,794,519
effective search space: 187068456
effective search space used: 187068456
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 51 (24.3 bits)