BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0180a.4
(342 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BE998610 similar to GP|19701092|emb unnamed protein product {Ara... 124 7e-29
TC76890 102 2e-22
TC81816 similar to GP|8096269|dbj|BAA95789.1 KED {Nicotiana taba... 40 0.001
BQ137953 weakly similar to GP|22136724|gb unknown protein {Arabi... 37 0.011
TC82097 similar to PIR|H86442|H86442 unknown protein [imported] ... 35 0.042
TC76514 homologue to PIR|T09648|T09648 nucleolin homolog nuM1 - ... 35 0.042
TC91382 GP|21327675|gb|AAC37438.2 CPH1 {Chlamydomonas reinhardti... 33 0.16
BQ136417 weakly similar to EGAD|146423|156 vitellogenin {Anolis ... 33 0.21
BI309428 weakly similar to GP|21734794|gb| reduced vernalization... 33 0.21
TC87688 similar to GP|10177535|dbj|BAB10930. gene_id:K1F13.21~un... 32 0.27
TC88424 similar to GP|22136724|gb|AAM91681.1 unknown protein {Ar... 32 0.27
AW683905 weakly similar to GP|9757854|dbj| contains similarity t... 32 0.27
BE202962 similar to GP|20259449|gb| unknown protein {Arabidopsis... 32 0.35
TC76402 weakly similar to GP|18086561|gb|AAL57705.1 At2g01100/F2... 32 0.35
BF632358 weakly similar to GP|19352296|gb MULTIPLE BANDED ANTIGE... 32 0.35
BG644339 weakly similar to PIR|T48401|T484 histone deacetylase-l... 32 0.46
TC82080 similar to GP|9757854|dbj|BAB08488.1 contains similarity... 32 0.46
TC86042 similar to GP|20466712|gb|AAM20673.1 putative SF16 prote... 31 0.60
TC80893 similar to GP|4557063|gb|AAD22502.1| expressed protein {... 31 0.60
TC90113 similar to PIR|C86301|C86301 arginine/serine-rich protei... 30 1.8
>BE998610 similar to GP|19701092|emb unnamed protein product {Arabidopsis
thaliana}, partial (20%)
Length = 480
Score = 124 bits (310), Expect = 7e-29
Identities = 61/78 (78%), Positives = 69/78 (88%)
Frame = +1
Query: 265 RCVALDAVVETELVAALKVSVFPEMIFTKSGKILFRDKAIRNADELSKIMAYFYFGAAKP 324
+CVALDAVVETELVAALKVSVFPE+IFTK+GKILFRDKAIR+ADE SKIMA+FY+ AKP
Sbjct: 34 KCVALDAVVETELVAALKVSVFPEVIFTKAGKILFRDKAIRSADEWSKIMAFFYYRGAKP 213
Query: 325 PCLNSFTDFQEDIPSLVI 342
CL + DFQE+IPS I
Sbjct: 214 SCLTNIPDFQENIPSFTI 267
>TC76890
Length = 521
Score = 102 bits (255), Expect = 2e-22
Identities = 68/131 (51%), Positives = 79/131 (59%), Gaps = 1/131 (0%)
Frame = +2
Query: 6 SMTLP-SSSLSSPIGVKERNFNMPTSYCCLHKDKPRKQFLNLSLSSNLSLLVGDSKAPRR 64
++TLP S SL S I K NFN+P + L+ KP + N L + R
Sbjct: 158 ALTLPLSPSLISAI--KHINFNLPPNSFSLYNQKPTNKLFNSRT------LFSNPIFSTR 313
Query: 65 VQALKSDGAHRKSGKREASSDSDSDSDDENDAPPPINDPYLMTLEERQEWRRKIRQVMDM 124
VQALKSDGA +E+ SDSD DSD E+D P NDPY+MTLEERQEWRRKIRQVMD
Sbjct: 314 VQALKSDGAGWNKRGKESYSDSD-DSDYEDDTPKE-NDPYVMTLEERQEWRRKIRQVMDK 487
Query: 125 KPNVQEESDPE 135
KP VQE D E
Sbjct: 488 KPQVQEVVDTE 520
>TC81816 similar to GP|8096269|dbj|BAA95789.1 KED {Nicotiana tabacum},
partial (13%)
Length = 663
Score = 40.4 bits (93), Expect = 0.001
Identities = 48/191 (25%), Positives = 85/191 (44%), Gaps = 16/191 (8%)
Frame = +3
Query: 77 SGKREASS-----DSDSDSDDENDAPPPINDPYLMTLEERQEWRRKIRQVMDMKPNVQEE 131
S K E S+ D S D + D D + ++E+ E + K + K +V E
Sbjct: 57 SSKMEESNIPIKIDDKSAGDVKEDKVEIEKDLEIKSVEKDDEKKEKKDKEKKDKTDVDEG 236
Query: 132 SDPEEKKKKMEKLMKDYPLVVDEEDPNWPEDAD---------GWGFSLGQFFNKITIKDN 182
D ++K+KK +K K+ + +EED + +D + G K + KD
Sbjct: 237 KDKKDKEKK-KKEKKEENVKGEEEDGDEKKDKEKKKKEKKEKGKEDKDKDGEEKKSKKDK 413
Query: 183 KKAKDDDDDDDEGNKVVWQDDDYIRPIKDIKSSEWEETVFKD--ISPLIILVHNRYRRPK 240
+K KD ++DDDEG +D + KD K + EE ++ +S I + + K
Sbjct: 414 EKKKDKNEDDDEG-----EDGSKKKKNKDKKEKKKEEDEKEEGKVSVRDIDIEETAKEGK 578
Query: 241 ENERIRDELEK 251
E ++ +++ E+
Sbjct: 579 EKKKKKEDKEE 611
Score = 28.1 bits (61), Expect = 5.1
Identities = 22/84 (26%), Positives = 37/84 (43%), Gaps = 11/84 (13%)
Frame = +3
Query: 71 DGAHRKSGK-REASSDSDSDSDDENDAPPPINDPYLMTL----EERQEWRRKIRQV---- 121
DG +KS K +E D + D D+ D + +E++E + +R +
Sbjct: 381 DGEEKKSKKDKEKKKDKNEDDDEGEDGSKKKKNKDKKEKKKEEDEKEEGKVSVRDIDIEE 560
Query: 122 --MDMKPNVQEESDPEEKKKKMEK 143
+ K +++ D EEKKKK K
Sbjct: 561 TAKEGKEKKKKKEDKEEKKKKSGK 632
>BQ137953 weakly similar to GP|22136724|gb unknown protein {Arabidopsis
thaliana}, partial (21%)
Length = 657
Score = 37.0 bits (84), Expect = 0.011
Identities = 39/163 (23%), Positives = 74/163 (44%), Gaps = 6/163 (3%)
Frame = +2
Query: 88 SDSDDENDAPPPINDPYLMTLEERQEWRRKIRQVMDMKPNVQEESDPEEKKKKMEKLMKD 147
+ DDE++APPP LE+++ + K+++ MKP+ + E + EE++ E+
Sbjct: 149 TSDDDEDNAPPPTTS----YLEDKR--KMKLQEEEKMKPSDEAEKEEEEEQSSEEE---- 298
Query: 148 YPLVVDEEDPNWPEDADGWGFSLGQFFNKITIKDNKKAKDDDDDDDEGNKVVWQDDDYIR 207
+EE+ + EDA G + +F K + N D D D + +D +
Sbjct: 299 ---EEEEEEESPVEDAKPIGEPV-RFSGKGRGRKNHFQSFDFDGDQ------YSLEDPVL 448
Query: 208 PIKDIKSSEWEETVFKDISPLI------ILVHNRYRRPKENER 244
+ ++K + + KDI+ I ++ + RP E E+
Sbjct: 449 LVPEVKDQKPYVAIIKDITQSINGNGSLMITGQWFYRPDEAEK 577
>TC82097 similar to PIR|H86442|H86442 unknown protein [imported] -
Arabidopsis thaliana, partial (20%)
Length = 1204
Score = 35.0 bits (79), Expect = 0.042
Identities = 30/129 (23%), Positives = 61/129 (47%), Gaps = 4/129 (3%)
Frame = +1
Query: 124 MKPNVQEESDPEEKKKKMEKLMKDYP--LVVDEEDPNWPEDADGWGFSLGQFFNKITIKD 181
+K V D ++ KKK ++ + P L+V +EDP W + D LG+
Sbjct: 250 LKKYVSNPDDDKKNKKKKKRKTQPQPTGLLVVDEDPTWQKPVD-----LGE--------- 387
Query: 182 NKKAKDDDDDDDEGNKVVWQDDDY--IRPIKDIKSSEWEETVFKDISPLIILVHNRYRRP 239
++DD DE +V +D + ++ ++ +K+ + +D S + L +N P
Sbjct: 388 ----ENDDKSSDEEKPIVDEDIEVKRMKRLEQLKARRAYHDISEDGSGWVPLSNNDTSPP 555
Query: 240 KENERIRDE 248
++ +R+R++
Sbjct: 556 RK-QRVRND 579
>TC76514 homologue to PIR|T09648|T09648 nucleolin homolog nuM1 - alfalfa,
partial (61%)
Length = 1288
Score = 35.0 bits (79), Expect = 0.042
Identities = 40/178 (22%), Positives = 63/178 (34%), Gaps = 14/178 (7%)
Frame = +3
Query: 61 APRRVQALKSDGAHRKSGKREASSDSDSDSDDENDAPPPINDPYLMTLEERQEWRRKIRQ 120
A + V + +K+ E +D SD D+E++ P P + ++
Sbjct: 573 AAKAVPSKNGSAPAKKAASDEEDTDESSDEDEEDEKPAAKAVP-------SKNGSVPAKK 731
Query: 121 VMDMKPNVQEESDPEEKKKKMEKLMKDYPLVV--------DEEDPNWPEDADGWGFSLGQ 172
+ ES EE KK K K+ +E D ED D S
Sbjct: 732 ADTESSDEDSESSDEEDKKPAAKASKNVSAPTKKAASSSDEESDEESDEDEDAKPVSKPA 911
Query: 173 FFNKITIKDNKKAKDDDDDDDEGNK------VVWQDDDYIRPIKDIKSSEWEETVFKD 224
K K K + D DD+DD+ + V + +D + KD S+ E +D
Sbjct: 912 AVAK---KSKKDSSDSDDEDDDSSSDEDKKPVAAKKEDKMNVDKDGSDSDQSEEESED 1076
>TC91382 GP|21327675|gb|AAC37438.2 CPH1 {Chlamydomonas reinhardtii}, partial
(1%)
Length = 702
Score = 33.1 bits (74), Expect = 0.16
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = +1
Query: 148 YPLVVDEEDPN-WPEDADGWGFSLGQFFNKITIKDNKKAKDDDDDDDEGNKVVWQDDDYI 206
YP V+D+ P+ W E ++G+ S + I + + + DDDDDDD+ + + DDY+
Sbjct: 481 YPPVIDKSGPSSWVESSNGYA-SASKNLISIDEQGSDHSYDDDDDDDDLSDLFM--DDYM 651
>BQ136417 weakly similar to EGAD|146423|156 vitellogenin {Anolis pulchellus},
partial (20%)
Length = 621
Score = 32.7 bits (73), Expect = 0.21
Identities = 20/70 (28%), Positives = 39/70 (55%)
Frame = +2
Query: 88 SDSDDENDAPPPINDPYLMTLEERQEWRRKIRQVMDMKPNVQEESDPEEKKKKMEKLMKD 147
+ DDE++APPP LE+++ + K+++ MKP+ + E + EE++ E+ ++
Sbjct: 149 TSDDDEDNAPPPTTS----YLEDKR--KMKLQEEEKMKPSDEAEKEEEEEQSSEEEEEEE 310
Query: 148 YPLVVDEEDP 157
+EE P
Sbjct: 311 -----EEESP 325
>BI309428 weakly similar to GP|21734794|gb| reduced vernalization response 1
{Arabidopsis thaliana}, partial (6%)
Length = 710
Score = 32.7 bits (73), Expect = 0.21
Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 5/87 (5%)
Frame = +1
Query: 81 EASSDSDSDSDDENDAPPPINDPYLMTLEERQEW--RRKIRQ---VMDMKPNVQEESDPE 135
E D+ DSDDEND +D ++E EW R+K RQ + +P+ + + D E
Sbjct: 103 EIDYDTSCDSDDENDNVDHSDDD--ESVEILDEWLNRKKARQRSPFVSSRPHKKVQGDDE 276
Query: 136 EKKKKMEKLMKDYPLVVDEEDPNWPED 162
+ K+ + NWP+D
Sbjct: 277 KTTKRTSSM-------------NWPKD 318
>TC87688 similar to GP|10177535|dbj|BAB10930. gene_id:K1F13.21~unknown
protein {Arabidopsis thaliana}, partial (46%)
Length = 2077
Score = 32.3 bits (72), Expect = 0.27
Identities = 39/164 (23%), Positives = 71/164 (42%), Gaps = 12/164 (7%)
Frame = +2
Query: 101 NDPYLMTLEERQEWRRKIRQVMDMKPNVQEESDPEEKKKKMEKLMKDYPLVVDEEDPNWP 160
+ P L TL RR++ Q + + + P + KK+EK K + +EE ++
Sbjct: 245 SQPLLSTL------RRRLNQFVKNPEEIAQFKVPLDVGKKLEK--KKRVELEEEESDDFD 400
Query: 161 EDADGWGFSLGQFFNKITIKDNKKAKDD----DDDDDEGNKVVWQDDDYIRPIKDIKSSE 216
E+ D + K K + +DD DD+D+EG++ +DD + +K
Sbjct: 401 EELDDDDDDF-EGVEKKKAKGGSEGEDDFEEEDDEDEEGSE---DEDDEEDEKEKVKGGG 568
Query: 217 WEETVFK--DISPLIILVHNRYRRPKENERI------RDELEKA 252
E+ K +++ + + Y + +E + DELEKA
Sbjct: 569 IEDKFLKIDELTEYLEKEEDNYEKGEERDEADEDSEEDDELEKA 700
>TC88424 similar to GP|22136724|gb|AAM91681.1 unknown protein {Arabidopsis
thaliana}, partial (50%)
Length = 1635
Score = 32.3 bits (72), Expect = 0.27
Identities = 36/162 (22%), Positives = 71/162 (43%), Gaps = 5/162 (3%)
Frame = +2
Query: 88 SDSDDENDAPPPINDPYLMTLEERQEWRR-KIRQVMDMKPNVQEESDPEEKKKKMEKLMK 146
+ D+E++APPP P L +R++ + + N +SD +E++KK
Sbjct: 65 TSDDEEDEAPPP---PQHSKLRKRKKMKLIDEEDDEESNDNSNNDSDAKEEEKK------ 217
Query: 147 DYPLVVDEEDPNWPEDADGWGFSLGQFFNKITIKDNKKAKDDDDDDDEGNKVVWQDDDYI 206
+ P PEDA G L +++ K + + + + +GN+ + +D +
Sbjct: 218 --------DSPQTPEDAKPIGEPL-----RVSGKGRGRKRHYESFEFDGNQ--YSLEDPV 352
Query: 207 RPIKDIKSSEWEETVFKDI----SPLIILVHNRYRRPKENER 244
+ + K + + KDI S I++ + RP+E E+
Sbjct: 353 MLVPEDKEQKPYVAIIKDIIQYFSGSIMVAGQWFYRPEEAEK 478
>AW683905 weakly similar to GP|9757854|dbj| contains similarity to apoptosis
antagonizing transcription factor~gene_id:MFB13.10,
partial (12%)
Length = 492
Score = 32.3 bits (72), Expect = 0.27
Identities = 25/126 (19%), Positives = 58/126 (45%)
Frame = +3
Query: 132 SDPEEKKKKMEKLMKDYPLVVDEEDPNWPEDADGWGFSLGQFFNKITIKDNKKAKDDDDD 191
S +K K M+K D D++D ++ E D +++ + + +D+ ++
Sbjct: 84 SSSAKKSKNMQKSDSDLDEYDDDDDMSYDEVNDD---------SELEEEKEEDGEDEGEE 236
Query: 192 DDEGNKVVWQDDDYIRPIKDIKSSEWEETVFKDISPLIILVHNRYRRPKENERIRDELEK 251
DD + W+DD+ + K+ K +E ++++ L L H+ K+ + ++ + K
Sbjct: 237 DDGQEENGWRDDEMEQLEKEYKDLHHQE---QELNTLKNLKHH-----KDEDLLKGQAVK 392
Query: 252 AVHIIW 257
+ +W
Sbjct: 393 SQKALW 410
Score = 27.3 bits (59), Expect = 8.7
Identities = 22/82 (26%), Positives = 38/82 (45%), Gaps = 3/82 (3%)
Frame = +3
Query: 70 SDGAHRKSGKREASSDSDSDSDDENDAPPPINDPYLMTLEERQEWRRKIRQVMDMKPNVQ 129
S A + +++ SD D DD++ + +ND LEE +E D + +
Sbjct: 84 SSSAKKSKNMQKSDSDLDEYDDDDDMSYDEVNDD--SELEEEKE--------EDGEDEGE 233
Query: 130 EESDPEE---KKKKMEKLMKDY 148
E+ EE + +ME+L K+Y
Sbjct: 234 EDDGQEENGWRDDEMEQLEKEY 299
>BE202962 similar to GP|20259449|gb| unknown protein {Arabidopsis thaliana},
partial (4%)
Length = 561
Score = 32.0 bits (71), Expect = 0.35
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Frame = -2
Query: 69 KSDGAHRKSGKREASSDSDSDSDDENDAPPPINDPYLMTLEERQEWRRKIRQVMDMK-PN 127
+ D ++ KRE+ SDSDS+S +D D L T ++ + + + ++ ++K P+
Sbjct: 419 RRDKRSKRRSKRESGSDSDSESSSSSD------DESLDTQQQELKRKDRYQKKAELKSPS 258
Query: 128 VQEESDPEEKKKKME 142
V E+ P +K E
Sbjct: 257 VVEKDAPTIHHRKEE 213
>TC76402 weakly similar to GP|18086561|gb|AAL57705.1 At2g01100/F23H14.7
{Arabidopsis thaliana}, partial (43%)
Length = 1449
Score = 32.0 bits (71), Expect = 0.35
Identities = 33/149 (22%), Positives = 61/149 (40%), Gaps = 14/149 (9%)
Frame = +3
Query: 61 APRRVQALKSDGAHRKSGKREASSDSDSDSDDENDAPPP------------INDPYLMTL 108
A + + LK+ ++SG + +DSD DSDDE + +
Sbjct: 783 AEAKEKKLKTAKHKKRSG---SDTDSDRDSDDERKRASKRSHRKHRKHSHIDSGDHEKRK 953
Query: 109 EERQEWRRKIR--QVMDMKPNVQEESDPEEKKKKMEKLMKDYPLVVDEEDPNWPEDADGW 166
E+ +W+ K R + D + E S EEK++K ++ K + D++ + +D +
Sbjct: 954 EKSSKWKTKKRSSESSDFSSDESESSSEEEKRRKKKQRKK----IRDQDSRSNSSGSDSY 1121
Query: 167 GFSLGQFFNKITIKDNKKAKDDDDDDDEG 195
+ + + + K D D DEG
Sbjct: 1122ADEVNKRKRRHRRRRPSKFSDSDFYSDEG 1208
>BF632358 weakly similar to GP|19352296|gb MULTIPLE BANDED ANTIGEN
(FRAGMENT). 6/101 {Dictyostelium discoideum}, partial
(3%)
Length = 578
Score = 32.0 bits (71), Expect = 0.35
Identities = 16/58 (27%), Positives = 31/58 (52%)
Frame = +2
Query: 140 KMEKLMKDYPLVVDEEDPNWPEDADGWGFSLGQFFNKITIKDNKKAKDDDDDDDEGNK 197
++ + + P++ DEE+ N ED + S ++ D ++ D DDDDD+G++
Sbjct: 365 ELSSMCEKMPVMEDEENNNMMEDEEEEKDSDDVDYDDNDDHDAEEGNDSDDDDDDGSE 538
>BG644339 weakly similar to PIR|T48401|T484 histone deacetylase-like protein
- Arabidopsis thaliana, partial (26%)
Length = 763
Score = 31.6 bits (70), Expect = 0.46
Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 3/106 (2%)
Frame = +1
Query: 47 SLSSNLSLLVGDSKAPRRVQALKSDGAHRK--SGKREASSDSD-SDSDDENDAPPPINDP 103
+L+ L V D K + A D + K + K+EA SD D SDS+ ++D P ++ P
Sbjct: 376 ALNGKLEADVKDVKPDAKKSAPVKDEKNAKIAASKKEAESDEDDSDSEGDSDVPLGMDGP 555
Query: 104 YLMTLEERQEWRRKIRQVMDMKPNVQEESDPEEKKKKMEKLMKDYP 149
M E + +E+ EE KK+E+ + P
Sbjct: 556 EGMDFSGDSE----------DDDDSEEDDSEEETPKKVEQKKRPAP 663
>TC82080 similar to GP|9757854|dbj|BAB08488.1 contains similarity to
apoptosis antagonizing transcription
factor~gene_id:MFB13.10, partial (37%)
Length = 908
Score = 31.6 bits (70), Expect = 0.46
Identities = 25/82 (30%), Positives = 39/82 (47%)
Frame = +2
Query: 67 ALKSDGAHRKSGKREASSDSDSDSDDENDAPPPINDPYLMTLEERQEWRRKIRQVMDMKP 126
+LK K K+ SDSD D D++ + +ND + EE ++ + D +
Sbjct: 8 SLKMGSRSAKKSKKMQKSDSDLDEYDDDMSFNEVNDDSEVEEEEEEDDEGSDEEEEDER- 184
Query: 127 NVQEESDPEEKKKKMEKLMKDY 148
QEES K +ME+L K+Y
Sbjct: 185 --QEES--RWKDDEMEQLEKEY 238
>TC86042 similar to GP|20466712|gb|AAM20673.1 putative SF16 protein
{Arabidopsis thaliana}, partial (39%)
Length = 2305
Score = 31.2 bits (69), Expect = 0.60
Identities = 15/32 (46%), Positives = 22/32 (67%)
Frame = -2
Query: 23 RNFNMPTSYCCLHKDKPRKQFLNLSLSSNLSL 54
++F YC +KD+P+K+ L+LSLSS L L
Sbjct: 324 QSFQSCKKYCQSYKDRPKKKKLSLSLSSLLLL 229
>TC80893 similar to GP|4557063|gb|AAD22502.1| expressed protein {Arabidopsis
thaliana}, partial (39%)
Length = 883
Score = 31.2 bits (69), Expect = 0.60
Identities = 13/29 (44%), Positives = 19/29 (64%)
Frame = +3
Query: 176 KITIKDNKKAKDDDDDDDEGNKVVWQDDD 204
K K+NK +DD+DDD+ + V +DDD
Sbjct: 291 KPAYKENKSDTEDDEDDDDDDDVQDEDDD 377
>TC90113 similar to PIR|C86301|C86301 arginine/serine-rich protein [imported]
- Arabidopsis thaliana, partial (70%)
Length = 1259
Score = 29.6 bits (65), Expect = 1.8
Identities = 17/49 (34%), Positives = 25/49 (50%)
Frame = +1
Query: 58 DSKAPRRVQALKSDGAHRKSGKREASSDSDSDSDDENDAPPPINDPYLM 106
DS +PR+V + R+ K ASS+S S S +PPP P ++
Sbjct: 1087 DSPSPRKVSRRSKSRSPRRPLKGRASSNSSSSS-----SPPPARKPXII 1218
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.315 0.134 0.396
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,059,575
Number of Sequences: 36976
Number of extensions: 155886
Number of successful extensions: 1515
Number of sequences better than 10.0: 96
Number of HSP's better than 10.0 without gapping: 1113
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1329
length of query: 342
length of database: 9,014,727
effective HSP length: 97
effective length of query: 245
effective length of database: 5,428,055
effective search space: 1329873475
effective search space used: 1329873475
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 59 (27.3 bits)
Lotus: description of TM0180a.4