BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0175.2
(314 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC79766 homologue to GP|5923912|gb|AAD56411.1| bHLH transcriptio... 278 1e-75
TC77805 similar to GP|20127064|gb|AAM10951.1 putative bHLH trans... 152 1e-37
TC90648 similar to GP|20127044|gb|AAM10942.1 putative bHLH trans... 144 6e-35
TC90528 homologue to GP|21592490|gb|AAM64440.1 unknown {Arabidop... 140 5e-34
TC78020 similar to GP|20127060|gb|AAM10949.1 putative bHLH trans... 139 1e-33
TC93549 similar to GP|20127044|gb|AAM10942.1 putative bHLH trans... 139 1e-33
TC80777 homologue to GP|4115386|gb|AAD03387.1| unknown protein {... 86 2e-17
AW585039 similar to GP|13605859|gb AT4g02590/T10P11_13 {Arabidop... 81 6e-16
TC80735 similar to GP|20127064|gb|AAM10951.1 putative bHLH trans... 79 3e-15
AW775035 similar to GP|13486760|dbj hypothetical protein {Oryza ... 75 3e-14
BF641877 similar to GP|13605859|gb AT4g02590/T10P11_13 {Arabidop... 75 3e-14
AW559848 homologue to GP|21592490|gb| unknown {Arabidopsis thali... 74 7e-14
TC80840 similar to GP|15724178|gb|AAL06481.1 At1g35460/F12A4_2 {... 73 2e-13
TC83430 similar to GP|19401700|gb|AAL87667.1 transcription facto... 70 1e-12
TC80122 similar to GP|19401700|gb|AAL87667.1 transcription facto... 68 5e-12
CA922513 similar to GP|2673918|gb|A unknown protein {Arabidopsis... 65 3e-11
TC77495 similar to GP|2673918|gb|AAB88652.1| unknown protein {Ar... 62 4e-10
TC91130 homologue to GP|11245494|gb|AAG33640.1 SPATULA {Arabidop... 61 5e-10
CA919209 similar to SP|O80536|PIF3_ Phytochrome-interacting fact... 57 7e-09
AW774910 similar to GP|20127075|gb| putative bHLH transcription ... 57 1e-08
>TC79766 homologue to GP|5923912|gb|AAD56411.1| bHLH transcription factor
GBOF-1 {Tulipa gesneriana}, partial (28%)
Length = 944
Score = 278 bits (712), Expect = 1e-75
Identities = 177/311 (56%), Positives = 212/311 (67%), Gaps = 21/311 (6%)
Frame = +1
Query: 1 MAAFSHHHYHPFLVDSTSRFIKMSSLEDELLQPHINTTTLHQETSFSVTETSSVDQSSKI 60
MAAFS+ YHPFLVDS+ M ++ P LHQ+ V + QSSK+
Sbjct: 58 MAAFSYQ-YHPFLVDSSF----MLNMNTASPPPPSQFHPLHQDIINCVDQ-----QSSKV 207
Query: 61 TISDSE---LSVEKNQSPETSMVVASME--------------KKRRSRNGS-PLSKD--P 100
T + +E S+ KN SP++SMV+ +E KKRR+RN + P S D
Sbjct: 208 TTTITENEPSSLTKNLSPQSSMVLDKLENGDEQVTQKNSPTEKKRRTRNNTNPQSHDNAA 387
Query: 101 KGGSKKQKKGNGGVKEEDMAKEEKKDKKKGPEEPSTGYIHVRARRGQATDSHSLAERVRR 160
+G +KKQKK KE++ AK EKKD++K +EP TGYIHVRARRGQATDSHSLAERVRR
Sbjct: 388 EGKNKKQKKN----KEDEKAKAEKKDQRKCLDEPPTGYIHVRARRGQATDSHSLAERVRR 555
Query: 161 EKISERMNMLQQLVPGCDKVTGKALVLEEIINYVQSLQHQVEFLSMKLASVNPMLFDMAM 220
EKISERM LQQLVPGCDKVTGKAL+L+EIINYVQSLQ+QVEFLSMKL SVNPM +DMA
Sbjct: 556 EKISERMKKLQQLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSMKLTSVNPMFYDMAT 735
Query: 221 DLDNLLVRPEQKVNSLASPPLVLPCVPLCN-PNPGTTFADTSTLNPSTSFPTANHDYLLD 279
DLD LLVR ++K+N+LASP L V CN P GTTFADT+T+ P+ F AN DYLLD
Sbjct: 736 DLDTLLVR-QEKLNNLASPS-TLSSVSHCNSPKQGTTFADTTTMTPTNIFQAAN-DYLLD 906
Query: 280 YPCSDFLQGQQ 290
S FLQGQ+
Sbjct: 907 TSASIFLQGQR 939
>TC77805 similar to GP|20127064|gb|AAM10951.1 putative bHLH transcription
factor {Arabidopsis thaliana}, partial (30%)
Length = 2068
Score = 152 bits (385), Expect = 1e-37
Identities = 97/191 (50%), Positives = 120/191 (62%), Gaps = 6/191 (3%)
Frame = +3
Query: 52 SSVDQSSKITISDSELSVEKNQSPETSMVVASME----KKRRSRNGSPLSKDPKGGSKKQ 107
+S D +S+ + S N + T V S E KK ++ G + ++
Sbjct: 882 ASPDMNSRKRKASSSKGKAPNSTNPTKGVEGSGEDFNAKKIKANEGERNENGVRNMEEEI 1061
Query: 108 KKGNGGVKEEDMAKEEKKDKKKGPEEPSTGYIHVRARRGQATDSHSLAERVRREKISERM 167
K+G EE K+ K D K P EP YIHVRARRGQATDSHSLAERVRREKISERM
Sbjct: 1062 KEGTPNAGEE---KQNKSDSK--PPEPQKDYIHVRARRGQATDSHSLAERVRREKISERM 1226
Query: 168 NMLQQLVPGCDKVTGKALVLEEIINYVQSLQHQVEFLSMKLASVNPMLFDMAMDLDNLLV 227
+LQ LVPGC+KVTGKAL+L+EIINYVQSLQ QVEFLSMKL+SVN M + +++L+V
Sbjct: 1227 KLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLSSVNT---KMDLSIESLVV 1397
Query: 228 RPE--QKVNSL 236
+ Q NSL
Sbjct: 1398 SKDIFQSNNSL 1430
>TC90648 similar to GP|20127044|gb|AAM10942.1 putative bHLH transcription
factor {Arabidopsis thaliana}, partial (21%)
Length = 1164
Score = 144 bits (362), Expect = 6e-35
Identities = 90/203 (44%), Positives = 120/203 (58%), Gaps = 2/203 (0%)
Frame = +3
Query: 93 GSPLSKDPKGGSKKQKKGNGGVKEEDMAKEEKKDKKKGPEEPSTGYIHVRARRGQATDSH 152
G + P+ S K+ + K E K+ K + G + +IHVRARRGQAT+SH
Sbjct: 6 GDGVKDSPRKISDGSKENDKKPKVEQSGKQAKDNSPSG-DASKDNFIHVRARRGQATNSH 182
Query: 153 SLAERVRREKISERMNMLQQLVPGCDKVTGKALVLEEIINYVQSLQHQVEFLSMKLASVN 212
SLAERVRREKISERM +LQ+LVPGC+K+TGKA++L+EIINYVQSLQ QVEFLSMKLA+VN
Sbjct: 183 SLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVN 362
Query: 213 PMLFDMAMDLDNLLVRPEQKVNSLASPPLVLPCVPLCNPNPGTTFADTSTLNP--STSFP 270
P ++ D++ LL + + +P + +P P +F P ST FP
Sbjct: 363 P---ELNFDVERLLSKDILQSRLGLGIGGFVPGMSSSHPFPNASFQGNMAGMPSSSTQFP 533
Query: 271 TANHDYLLDYPCSDFLQGQQRPN 293
+ LD+ +F PN
Sbjct: 534 PLPQN-ALDHDFQNFYGMGYDPN 599
>TC90528 homologue to GP|21592490|gb|AAM64440.1 unknown {Arabidopsis
thaliana}, partial (37%)
Length = 950
Score = 140 bits (354), Expect = 5e-34
Identities = 75/120 (62%), Positives = 87/120 (72%), Gaps = 2/120 (1%)
Frame = +1
Query: 98 KDPKGGSKKQKKGNGGVKEEDMAKEEKKDKKKGP--EEPSTGYIHVRARRGQATDSHSLA 155
K K K + G+G V+ E + + + K P + P YIHVRARRGQATDSHSLA
Sbjct: 502 KRTKASGNKNEGGDGKVEGEASSGKHAEQSSKPPPSDPPKQDYIHVRARRGQATDSHSLA 681
Query: 156 ERVRREKISERMNMLQQLVPGCDKVTGKALVLEEIINYVQSLQHQVEFLSMKLASVNPML 215
ER RREKISERM +LQ LVPGC+KV GKALVL+EIINY+QSLQ QVEFLSMKL +VN L
Sbjct: 682 ERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRL 861
>TC78020 similar to GP|20127060|gb|AAM10949.1 putative bHLH transcription
factor {Arabidopsis thaliana}, partial (30%)
Length = 1473
Score = 139 bits (351), Expect = 1e-33
Identities = 89/216 (41%), Positives = 124/216 (57%), Gaps = 16/216 (7%)
Frame = +3
Query: 49 TETSSVDQSSKITISDSELSVEKNQSPETSMV--VASMEKKRRSRNGSPLSKDPKGGSKK 106
T + +++++K ++ E N SP S + V S++ + + + +P S
Sbjct: 357 TNAALIERAAKFSVFAGE-----NSSPGDSRLFPVESVKNEPQETDSNPCSTQECVSDPA 521
Query: 107 QKKGNGGVKEEDMAKE-----EKKDKKKGPEEPSTG----YIHVRARRGQATDSHSLAER 157
+ K VK ++ K+ KK K E G Y+HVR RRGQATDSHSLAER
Sbjct: 522 ENKNQRNVKRKEREKKGKASSSKKSKSIADETSGAGEKLPYVHVRVRRGQATDSHSLAER 701
Query: 158 VRREKISERMNMLQQLVPGCDKVTGKALVLEEIINYVQSLQHQVEFLSMKLASVNPMLFD 217
RREKI+ RM +LQ+LVPGC+K++G ALVL+EIIN+VQ+LQ QVE LSMKLA+VNP +
Sbjct: 702 ARREKINARMKLLQELVPGCEKISGTALVLDEIINHVQTLQRQVEILSMKLAAVNPRI-- 875
Query: 218 MAMDLDNLLVRP-----EQKVNSLASPPLVLPCVPL 248
+LD LL + + S PLV P +PL
Sbjct: 876 -DFNLDRLLAADGSSLMDSNLPSTMVTPLVWPEMPL 980
>TC93549 similar to GP|20127044|gb|AAM10942.1 putative bHLH transcription
factor {Arabidopsis thaliana}, partial (22%)
Length = 715
Score = 139 bits (350), Expect = 1e-33
Identities = 76/137 (55%), Positives = 94/137 (68%)
Frame = +1
Query: 79 MVVASMEKKRRSRNGSPLSKDPKGGSKKQKKGNGGVKEEDMAKEEKKDKKKGPEEPSTGY 138
+++ ME K G+ +P+ K ++ +K + K + + P Y
Sbjct: 88 IMINPMELKNLQNEGA--KDNPENQQKCDQQPTSTIKASG---KNAKQGSQNSDPPKEEY 252
Query: 139 IHVRARRGQATDSHSLAERVRREKISERMNMLQQLVPGCDKVTGKALVLEEIINYVQSLQ 198
IHVRARRGQAT+SHSLAERVRREKISERM LQ+LVPGC KVTGKA++L+EIINYVQSLQ
Sbjct: 253 IHVRARRGQATNSHSLAERVRREKISERMKFLQELVPGCSKVTGKAVMLDEIINYVQSLQ 432
Query: 199 HQVEFLSMKLASVNPML 215
QVEFLSMKLA+VNP L
Sbjct: 433 RQVEFLSMKLATVNPRL 483
>TC80777 homologue to GP|4115386|gb|AAD03387.1| unknown protein {Arabidopsis
thaliana}, partial (39%)
Length = 1307
Score = 85.9 bits (211), Expect = 2e-17
Identities = 48/85 (56%), Positives = 64/85 (74%), Gaps = 4/85 (4%)
Frame = +1
Query: 141 VRARRGQATDSHSLAERVRREKISERMNMLQQLVPGCDKVTGKALVLEEIINYVQSLQHQ 200
VRARRGQATD HS+AER+RRE+I+ERM LQ+LVP +K T KA +L+EII+YV+ LQ Q
Sbjct: 436 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQVQ 612
Query: 201 VEFLSMK----LASVNPMLFDMAMD 221
V+ LSM +V P++ DM+ +
Sbjct: 613 VKVLSMSRLGGAGAVAPLVADMSSE 687
>AW585039 similar to GP|13605859|gb AT4g02590/T10P11_13 {Arabidopsis
thaliana}, partial (46%)
Length = 628
Score = 80.9 bits (198), Expect = 6e-16
Identities = 42/66 (63%), Positives = 55/66 (82%)
Frame = +1
Query: 141 VRARRGQATDSHSLAERVRREKISERMNMLQQLVPGCDKVTGKALVLEEIINYVQSLQHQ 200
VRARRGQATD HS+AER+RRE+I+ERM LQ+LVP +K T KA +L+EI++YV+ L+ Q
Sbjct: 151 VRARRGQATDPHSIAERLRRERIAERMKALQELVPSINK-TDKAAMLDEIVDYVKFLRLQ 327
Query: 201 VEFLSM 206
V+ LSM
Sbjct: 328 VKVLSM 345
>TC80735 similar to GP|20127064|gb|AAM10951.1 putative bHLH transcription
factor {Arabidopsis thaliana}, partial (18%)
Length = 917
Score = 78.6 bits (192), Expect = 3e-15
Identities = 44/72 (61%), Positives = 55/72 (76%), Gaps = 1/72 (1%)
Frame = +3
Query: 169 MLQQLVPGCDKVTGKALVLEEIINYVQSLQHQVEFLSMKLASVNPMLFDMAMDLDNLLVR 228
+LQ LVPGC+KVTGKAL+L+EIINYVQSLQ QVEFLSMKLA+VN + +++L+ +
Sbjct: 3 LLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLATVNTR---VDFSIESLISK 173
Query: 229 PE-QKVNSLASP 239
Q NSLA P
Sbjct: 174 DMFQSNNSLAHP 209
>AW775035 similar to GP|13486760|dbj hypothetical protein {Oryza sativa
(japonica cultivar-group)}, partial (10%)
Length = 716
Score = 75.5 bits (184), Expect = 3e-14
Identities = 48/161 (29%), Positives = 87/161 (53%)
Frame = +1
Query: 55 DQSSKITISDSELSVEKNQSPETSMVVASMEKKRRSRNGSPLSKDPKGGSKKQKKGNGGV 114
DQ S + D+ + + + + M VA S NG+ D K+K +
Sbjct: 229 DQPSIQVLGDN--GAKGHAAADKGMEVAVASSSVCSGNGADRGSDDPNRDLKRKSRD--T 396
Query: 115 KEEDMAKEEKKDKKKGPEEPSTGYIHVRARRGQATDSHSLAERVRREKISERMNMLQQLV 174
++ + E+ +D+ G ++ + G ++R +A + H+L+ER RR++I+E+M LQ+L+
Sbjct: 397 EDSECHSEDVEDESVGVKKGAAGRGVAGSKRSRAAEVHNLSERRRRDRINEKMRALQELI 576
Query: 175 PGCDKVTGKALVLEEIINYVQSLQHQVEFLSMKLASVNPML 215
P C+KV KA +L+E I Y+++LQ QV+ +SM P +
Sbjct: 577 PNCNKV-DKASMLDEAIEYLKTLQLQVQMMSMGAGLYMPQM 696
>BF641877 similar to GP|13605859|gb AT4g02590/T10P11_13 {Arabidopsis
thaliana}, partial (55%)
Length = 642
Score = 75.1 bits (183), Expect = 3e-14
Identities = 39/65 (60%), Positives = 53/65 (81%)
Frame = +2
Query: 141 VRARRGQATDSHSLAERVRREKISERMNMLQQLVPGCDKVTGKALVLEEIINYVQSLQHQ 200
VRARRGQATD HS+AER+RRE+I+ER+ LQ+LVP +K T +A +L EI++YV+ L+ Q
Sbjct: 449 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLXEIVDYVKFLRLQ 625
Query: 201 VEFLS 205
V+ LS
Sbjct: 626 VKXLS 640
>AW559848 homologue to GP|21592490|gb| unknown {Arabidopsis thaliana},
partial (13%)
Length = 506
Score = 73.9 bits (180), Expect = 7e-14
Identities = 38/75 (50%), Positives = 48/75 (63%)
Frame = +1
Query: 93 GSPLSKDPKGGSKKQKKGNGGVKEEDMAKEEKKDKKKGPEEPSTGYIHVRARRGQATDSH 152
G+ + + GG K+ K +G K E+ + + ++ P YIHVRARRGQATDSH
Sbjct: 277 GNSNAVNDDGGDGKRSKTSGNSKGEENSSGKHAEETSDEPHPKKDYIHVRARRGQATDSH 456
Query: 153 SLAERVRREKISERM 167
SLAER RREKISERM
Sbjct: 457 SLAERARREKISERM 501
>TC80840 similar to GP|15724178|gb|AAL06481.1 At1g35460/F12A4_2 {Arabidopsis
thaliana}, partial (32%)
Length = 1049
Score = 72.8 bits (177), Expect = 2e-13
Identities = 46/112 (41%), Positives = 65/112 (57%)
Frame = +2
Query: 94 SPLSKDPKGGSKKQKKGNGGVKEEDMAKEEKKDKKKGPEEPSTGYIHVRARRGQATDSHS 153
SPL+ P + GV++ +A + K DK P +RA+RG AT S
Sbjct: 329 SPLT--PTSANVANNPFTQGVEDSGIAIDLKMDKILEDSVPCK----IRAKRGFATHPRS 490
Query: 154 LAERVRREKISERMNMLQQLVPGCDKVTGKALVLEEIINYVQSLQHQVEFLS 205
+AERVRR +IS+R+ LQ+LVP DK T A +L+E + YV+ LQ+Q+E LS
Sbjct: 491 IAERVRRTRISDRIRKLQELVPNMDKQTNTAEMLDEAVAYVKFLQNQIEELS 646
>TC83430 similar to GP|19401700|gb|AAL87667.1 transcription factor RAU1
{Oryza sativa}, partial (72%)
Length = 775
Score = 69.7 bits (169), Expect = 1e-12
Identities = 36/65 (55%), Positives = 46/65 (70%)
Frame = +1
Query: 141 VRARRGQATDSHSLAERVRREKISERMNMLQQLVPGCDKVTGKALVLEEIINYVQSLQHQ 200
+RA+RG AT S+AERVRR KISERM LQ LVP DK T + +L+ + Y++ LQ+Q
Sbjct: 262 IRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTSDMLDLAVEYIKDLQNQ 441
Query: 201 VEFLS 205
VE LS
Sbjct: 442 VETLS 456
>TC80122 similar to GP|19401700|gb|AAL87667.1 transcription factor RAU1
{Oryza sativa}, partial (72%)
Length = 1127
Score = 67.8 bits (164), Expect = 5e-12
Identities = 42/116 (36%), Positives = 57/116 (48%), Gaps = 8/116 (6%)
Frame = +2
Query: 97 SKDPKGGSKKQKKGNGGVKEEDMAKEEKKDKKKGPEEPSTGYIH--------VRARRGQA 148
SK G Q + GG +A + ++H +RA+RG A
Sbjct: 218 SKQQFSGLNVQNETGGGHSNSPLAHQLSMPNTSSEMAAMEKFLHFLDSVPMKIRAKRGCA 397
Query: 149 TDSHSLAERVRREKISERMNMLQQLVPGCDKVTGKALVLEEIINYVQSLQHQVEFL 204
T S+AERVRR KISERM LQ LVP DK T A +L+ ++Y++ LQ Q + L
Sbjct: 398 THPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVDYIKDLQKQAQKL 565
>CA922513 similar to GP|2673918|gb|A unknown protein {Arabidopsis thaliana},
partial (23%)
Length = 427
Score = 65.1 bits (157), Expect = 3e-11
Identities = 33/69 (47%), Positives = 47/69 (67%)
Frame = -2
Query: 141 VRARRGQATDSHSLAERVRREKISERMNMLQQLVPGCDKVTGKALVLEEIINYVQSLQHQ 200
+RA+RG AT SLAERVRR +ISERM LQ++VP DK T + +L+ + Y++ Q Q
Sbjct: 378 IRAKRGFATHPRSLAERVRRTRISERMRKLQEIVPNIDKQTCTSEMLDLAVEYIKDFQKQ 199
Query: 201 VEFLSMKLA 209
++ +S K A
Sbjct: 198 LKTMSAKRA 172
>TC77495 similar to GP|2673918|gb|AAB88652.1| unknown protein {Arabidopsis
thaliana}, partial (28%)
Length = 834
Score = 61.6 bits (148), Expect = 4e-10
Identities = 31/65 (47%), Positives = 44/65 (67%)
Frame = +3
Query: 141 VRARRGQATDSHSLAERVRREKISERMNMLQQLVPGCDKVTGKALVLEEIINYVQSLQHQ 200
+RA+RG AT S+AERVRR +IS+R+ LQ L P DK T A +L+ + Y++ LQ Q
Sbjct: 309 IRAKRGFATHPRSIAERVRRTRISDRIKKLQGLFPKSDKQTSTADMLDLAVEYIKDLQEQ 488
Query: 201 VEFLS 205
V+ L+
Sbjct: 489 VQILT 503
>TC91130 homologue to GP|11245494|gb|AAG33640.1 SPATULA {Arabidopsis
thaliana}, partial (20%)
Length = 766
Score = 61.2 bits (147), Expect = 5e-10
Identities = 32/75 (42%), Positives = 53/75 (70%), Gaps = 1/75 (1%)
Frame = +2
Query: 143 ARRGQATDSHSLAERVRREKISERMNMLQQLVPGCDKVTGKALVLEEIINYVQSLQHQVE 202
++R +A + H+L+E+ RR +I+E+M LQ L+P +K T KA +L+E I Y++ LQ QV+
Sbjct: 17 SKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 193
Query: 203 FLSMKLA-SVNPMLF 216
LS++ S++PM F
Sbjct: 194 MLSLRNGLSLHPMYF 238
>CA919209 similar to SP|O80536|PIF3_ Phytochrome-interacting factor 3
(Phytochrome-associated protein 3), partial (11%)
Length = 727
Score = 57.4 bits (137), Expect = 7e-09
Identities = 35/127 (27%), Positives = 67/127 (52%)
Frame = -2
Query: 55 DQSSKITISDSELSVEKNQSPETSMVVASMEKKRRSRNGSPLSKDPKGGSKKQKKGNGGV 114
DQ S + D+ + + + + M VA S NG+ D K+K +
Sbjct: 621 DQPSIQVLGDN--GAKGHAAADKGMEVAVASSSVCSGNGADRGSDDPNRDLKRKSRD--T 454
Query: 115 KEEDMAKEEKKDKKKGPEEPSTGYIHVRARRGQATDSHSLAERVRREKISERMNMLQQLV 174
++ + E+ +D+ G ++ + G ++R +A + H+L+ER RR++I+E+M LQ+L+
Sbjct: 453 EDSECHSEDVEDESVGVKKGAAGRGVAGSKRSRAAEVHNLSERRRRDRINEKMRALQELI 274
Query: 175 PGCDKVT 181
P C+KV+
Sbjct: 273 PNCNKVS 253
>AW774910 similar to GP|20127075|gb| putative bHLH transcription factor
{Arabidopsis thaliana}, partial (18%)
Length = 712
Score = 56.6 bits (135), Expect = 1e-08
Identities = 26/38 (68%), Positives = 32/38 (83%)
Frame = +2
Query: 141 VRARRGQATDSHSLAERVRREKISERMNMLQQLVPGCD 178
VRARRGQATD HS+AER+RRE+I+ERM Q+LVP +
Sbjct: 599 VRARRGQATDPHSIAERLRRERIAERMKAXQELVPNAN 712
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.313 0.129 0.361
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,044,203
Number of Sequences: 36976
Number of extensions: 120645
Number of successful extensions: 991
Number of sequences better than 10.0: 116
Number of HSP's better than 10.0 without gapping: 944
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 975
length of query: 314
length of database: 9,014,727
effective HSP length: 96
effective length of query: 218
effective length of database: 5,465,031
effective search space: 1191376758
effective search space used: 1191376758
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 58 (26.9 bits)
Lotus: description of TM0175.2