TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0154.6
         (227 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC78171 GP|6562649|emb|CAB62805.1 possible F-box protein FBL6 {L...   376  e-105
AW980950                                                               28  2.9
TC87898 weakly similar to GP|1174199|gb|AAA86652.1| S25-PR6 {Nic...    27  4.9
TC87980 homologue to GP|4582789|emb|CAB40374.1 Starch synthase i...    27  8.4
AJ499698                                                               27  8.4

>TC78171 GP|6562649|emb|CAB62805.1 possible F-box protein FBL6 {Leishmania
           major}, partial (2%)
          Length = 1110

 Score =  376 bits (966), Expect = e-105
 Identities = 182/222 (81%), Positives = 201/222 (89%)
 Frame = +1

Query: 6   LVVILSFLHSASTGSAATNTQIKVTNNPADKLVAAINENRTAYKVSELYDNAGLACIALQ 65
           L  ILSFL     G++ + TQIK+T+NPADKLVAAINENRTA+K S L+DN GLAC+ALQ
Sbjct: 208 LFFILSFL--LGLGASTSATQIKITDNPADKLVAAINENRTAHKDSSLFDNPGLACLALQ 381

Query: 66  YIKAYQGDCGAVGGPDAKKPPESQFAEVFAPNCGVKASSLAPITGRFLGCQTKYVHAPEA 125
           YIKAYQGDCGAVGG DAKKPPESQFAE FAPNCGVKAS+LA ITGRFLGCQTKYVHAPEA
Sbjct: 382 YIKAYQGDCGAVGGSDAKKPPESQFAEAFAPNCGVKASTLARITGRFLGCQTKYVHAPEA 561

Query: 126 FSEVLIQNQRSLEILHSKNHTQVGAAVTGTDGGSPYFWCVLFSGGKPNSTFAFEGGVAKL 185
           FSE+LI+N++SL+IL+SKNHTQVGAAVTGTDGGSPYFWCVLFS GKPNSTFAFEGGVAK 
Sbjct: 562 FSEILIRNEKSLDILYSKNHTQVGAAVTGTDGGSPYFWCVLFSNGKPNSTFAFEGGVAKD 741

Query: 186 TKPGCFSGANDECSGAHDWSPLSVMWLFAASVLIALGFAFPL 227
           TKPGC+SGAND CSGAH WSP+S+MWLF ASV IA+GFAFPL
Sbjct: 742 TKPGCYSGANDVCSGAHVWSPVSLMWLFVASVSIAMGFAFPL 867


>AW980950 
          Length = 548

 Score = 28.1 bits (61), Expect = 2.9
 Identities = 14/44 (31%), Positives = 18/44 (40%), Gaps = 6/44 (13%)
 Frame = +1

Query: 176 FAFEGGVAKLTKPG------CFSGANDECSGAHDWSPLSVMWLF 213
           F+FEGG  K  +        C  G N  C G     PL  +W +
Sbjct: 214 FSFEGGFGKCVRDADCVDEVCSPGCNKRCVGFECQCPL*CLWFY 345


>TC87898 weakly similar to GP|1174199|gb|AAA86652.1| S25-PR6 {Nicotiana
           tabacum}, partial (25%)
          Length = 1300

 Score = 27.3 bits (59), Expect = 4.9
 Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 7/55 (12%)
 Frame = +3

Query: 157 GGSPYFWCVLFSGGKPNSTFAF---EGGVAKLTKPGCFSGANDECSGA----HDW 204
           GG  +F+C+     + N  F F    GG+  L    CF GAN  C GA    H W
Sbjct: 879 GGWGWFFCIF----RCNLYFVFLKYVGGIHNLIS*-CFGGANCNCLGAYVHQHQW 1028


>TC87980 homologue to GP|4582789|emb|CAB40374.1 Starch synthase isoform SS
           III {Vigna unguiculata}, partial (30%)
          Length = 1410

 Score = 26.6 bits (57), Expect = 8.4
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +3

Query: 192 SGANDECSGAHDWSPLSVMWLF 213
           +G N +    HDWS   V WLF
Sbjct: 48  NGFNPDIIHCHDWSSAPVAWLF 113


>AJ499698 
          Length = 258

 Score = 26.6 bits (57), Expect = 8.4
 Identities = 17/54 (31%), Positives = 25/54 (45%), Gaps = 2/54 (3%)
 Frame = +3

Query: 111 RFLGCQTKYVHAPEAFSEVLIQNQRSLEILHS--KNHTQVGAAVTGTDGGSPYF 162
           R+     +Y H P +F  + IQN  + +I HS  KNHT     +  T     +F
Sbjct: 27  RYSTVNQEYTH-P*SFPSLFIQNP*TFQIFHSKKKNHTHYLVVM*ATTSTQQHF 185


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.318    0.134    0.407 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,218,796
Number of Sequences: 36976
Number of extensions: 99057
Number of successful extensions: 402
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 402
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 402
length of query: 227
length of database: 9,014,727
effective HSP length: 93
effective length of query: 134
effective length of database: 5,575,959
effective search space: 747178506
effective search space used: 747178506
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)