TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0154.14
         (906 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

BG586266 similar to GP|7267666|em RNA-directed DNA polymerase-li...   220  2e-57
BG447966 weakly similar to PIR|G96509|G96 protein F27F5.21 [impo...   148  6e-36
BF650289 weakly similar to GP|9049283|dbj| orf129a {Beta vulgari...   134  2e-31
BG647708 weakly similar to GP|13786450|gb| putative reverse tran...   125  1e-28
TC83437 weakly similar to PIR|D86384|D86384 unknown protein [imp...   106  3e-23
TC83226 weakly similar to PIR|G86419|G86419 probable reverse tra...    99  1e-20
BG586267 weakly similar to PIR|A84888|A8 hypothetical protein At...    62  4e-18
BG587108 similar to PIR|G96509|G9 protein F27F5.21 [imported] - ...    75  3e-17
BE248682 similar to GP|18568269|gb putative gag-pol polyprotein ...    87  4e-17
BG586862                                                               85  1e-16
TC93101                                                                79  6e-15
TC91765 weakly similar to GP|19881779|gb|AAM01180.1 Putative ret...    69  6e-12
BQ148771                                                               69  1e-11
BG646730                                                               66  5e-11
BG587113 weakly similar to PIR|A84888|A8 hypothetical protein At...    66  7e-11
BG584442                                                               57  3e-08
AJ497561 weakly similar to GP|10140689|gb putative non-LTR retro...    50  3e-06
BF640104                                                               50  3e-06
BF631765                                                               47  3e-05
TC82442                                                                47  3e-05

>BG586266 similar to GP|7267666|em RNA-directed DNA polymerase-like protein
           {Arabidopsis thaliana}, partial (18%)
          Length = 789

 Score =  220 bits (561), Expect = 2e-57
 Identities = 111/256 (43%), Positives = 159/256 (61%)
 Frame = -3

Query: 71  NQFRLISLCNVIFKIITKTLANRLKIILPDLICESQTAFVPGRLITDNALVAFECFHYMK 130
           +++R I+ CN  +KII K L+ R++ +L  +I  SQ+AFVPGR I+DN L+  +  HY++
Sbjct: 775 SEYRTIAPCNTQYKIIAKILSKRMQPLLRSIISPSQSAFVPGRAISDNVLITHKILHYLR 596

Query: 131 KKISGCNGVMALKLDMSKAYDRVEWPFLASVLQQMGFPASWVSLIMTCVSTVDFSIMLNG 190
           +  +  +  MA+K DM+KAYDR+ W FL  VL ++GF   W+S IM CVSTV +S ++NG
Sbjct: 595 QSGAKKHVSMAVKTDMTKAYDRIAWNFLREVLTRLGFHGIWISWIMECVSTVSYSFLING 416

Query: 191 APQEPFQPHRGLRQGDPLSPYLFILCGEVFSALINKAVLASSLHGIKIARTAPVISHLLF 250
            PQ    P RGLRQGDPLSPYLFILC EV S L  +A+   +L G+K+AR  P I+HLLF
Sbjct: 415 GPQGRVLPSRGLRQGDPLSPYLFILCTEVLSGLCQQALRKGTLPGVKVARNCPPINHLLF 236

Query: 251 ADDSVIFARATVQEALSIKAILASYEQASGQVINLDKSKLSCSRNVPDDCFHELRQLLTV 310
           ADD++ F ++       + +I+  Y  ASG+ IN  KS ++ S          ++  L +
Sbjct: 235 ADDTMFFGKSNASSCAILLSIMDKYRAASGRCIN*TKSAITFSSKTSQAIIDRVKGELKI 56

Query: 311 KAVESYDKYLGLPTII 326
                  KYLG   I+
Sbjct: 55  AKEGGTGKYLGYRNIL 8


>BG447966 weakly similar to PIR|G96509|G96 protein F27F5.21 [imported] -
           Arabidopsis thaliana, partial (7%)
          Length = 687

 Score =  148 bits (373), Expect(2) = 6e-36
 Identities = 73/123 (59%), Positives = 91/123 (73%)
 Frame = +2

Query: 1   DVEEALFQMHPTKAPGCDGLPALFYQKFWHIIGDDVSHFCLQVLHGDIS*SIINKTLLVL 60
           +V EA+ QMHP KAPG DGLPALF+QK+WHI+G +V    LQVL+  +    +NKT +VL
Sbjct: 269 EVLEAINQMHPVKAPGPDGLPALFFQKYWHIVGKEVQQMVLQVLNNSMETEELNKTFIVL 448

Query: 61  IPKVKKPMHANQFRLISLCNVIFKIITKTLANRLKIILPDLICESQTAFVPGRLITDNAL 120
           IPK K P     +R ISLCNV+ KIITK +ANR+K  LPD+I   Q+AFV GRLITDNAL
Sbjct: 449 IPKGKNPNTPKDYRPISLCNVVMKIITKVIANRVKQTLPDVIDVEQSAFVQGRLITDNAL 628

Query: 121 VAF 123
           +A+
Sbjct: 629 IAW 637



 Score = 21.9 bits (45), Expect(2) = 6e-36
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +1

Query: 122 AFECFHYMKKKISG 135
           + ECFH++K K  G
Sbjct: 631 SMECFHWLKXKKKG 672


>BF650289 weakly similar to GP|9049283|dbj| orf129a {Beta vulgaris}, partial
           (69%)
          Length = 616

 Score =  134 bits (337), Expect = 2e-31
 Identities = 70/190 (36%), Positives = 111/190 (57%)
 Frame = +3

Query: 1   DVEEALFQMHPTKAPGCDGLPALFYQKFWHIIGDDVSHFCLQVLHGDIS*SIINKTLLVL 60
           +V+ ALF M  +KAPG DG    F++  W+IIGD V    L          IIN T + L
Sbjct: 36  EVKNALFSMDSSKAPGIDGYNVHFFKCSWNIIGDSVIDAILDFFKTGFMPKIINCTYVTL 215

Query: 61  IPKVKKPMHANQFRLISLCNVIFKIITKTLANRLKIILPDLICESQTAFVPGRLITDNAL 120
           +PK         FR I+ C+VI+KII+K L +R++ +L  ++ E+Q+AFV GR+I DN +
Sbjct: 216 LPKEVNVTSVKNFRPIACCSVIYKIISKILTSRMQGVLNSVVSENQSAFVKGRVIFDNII 395

Query: 121 VAFECFHYMKKKISGCNGVMALKLDMSKAYDRVEWPFLASVLQQMGFPASWVSLIMTCVS 180
           ++ E      +K  G +    +K+D+ KAYD  EWPF+  ++ ++GFP  +V+ +M  ++
Sbjct: 396 LSHELVKSYSRK--GISPRCMVKIDLXKAYDSXEWPFIKHLMLELGFPYKFVNWVMAXLT 569

Query: 181 TVDFSIMLNG 190
           T  ++   NG
Sbjct: 570 TASYTFNXNG 599


>BG647708 weakly similar to GP|13786450|gb| putative reverse transcriptase
           {Oryza sativa}, partial (9%)
          Length = 708

 Score =  125 bits (313), Expect = 1e-28
 Identities = 60/114 (52%), Positives = 84/114 (73%)
 Frame = +1

Query: 198 PHRGLRQGDPLSPYLFILCGEVFSALINKAVLASSLHGIKIARTAPVISHLLFADDSVIF 257
           P +GLRQGDPLSPYLFILC  V S L+ +     +LHGI++AR+ P I+HLLFADDS++F
Sbjct: 4   PEKGLRQGDPLSPYLFILCANVLSGLLKREGNKQNLHGIQVARSDPKITHLLFADDSLLF 183

Query: 258 ARATVQEALSIKAILASYEQASGQVINLDKSKLSCSRNVPDDCFHELRQLLTVK 311
           ARA + EA +I  +L SY+ ASGQ++N +KS++S S+NVP+     + Q + +K
Sbjct: 184 ARANLTEAATIMQVLHSYQSASGQLVNFEKSEVSYSQNVPNQEKEMICQQIAIK 345


>TC83437 weakly similar to PIR|D86384|D86384 unknown protein [imported] -
           Arabidopsis thaliana, partial (6%)
          Length = 951

 Score =  106 bits (265), Expect = 3e-23
 Identities = 88/337 (26%), Positives = 143/337 (42%), Gaps = 15/337 (4%)
 Frame = +2

Query: 53  INKTLLVLIPKVKKPMHANQFRLISLCNVIFKIITKTLANRLKIILPDLICESQTAFVPG 112
           IN T + LIPKV  P   N FR ISL   ++KI+ K LANRL++++  +I ++Q+AFV  
Sbjct: 50  INSTFIALIPKVDNPQRLNDFRPISLVGSLYKILGKLLANRLRVVIGSVISDAQSAFVKN 229

Query: 113 RLITDNALV--------------AFECFHYMKKKISGCN-GVMALKLDMSKAYDRVEWPF 157
           R I +   +               F C  ++ K++   + G++ +   +           
Sbjct: 230 RQILEMVFL*QMRLWMRLRN*RKIFCCLRWILKRLITLSIGLIWILF*VG---------- 379

Query: 158 LASVLQQMGFPASWVSLIMTCVSTVDFSIMLNGAPQEPFQPHRGLRQGDPLSPYLFILCG 217
                  M F   W   I  CVST   S+++NG+P       + L Q    + Y F +  
Sbjct: 380 -------MSFLVLWRKWIKECVSTATTSVLVNGSPTNVLM--KSLVQTQLFTRYSFGVVN 532

Query: 218 EVFSALINKAVLASSLHGIKIARTAPVISHLLFADDSVIFARATVQEALSIKAILASYEQ 277
            V                        V+SHL FA+D+++          +++A L  +  
Sbjct: 533 PV------------------------VVSHLQFANDTLLLETKNWANIRALRAALVIF*A 640

Query: 278 ASGQVINLDKSKLSCSRNVPDDCFHELRQLLTVKAVESYDKYLGLPTIIGKSKTQIFNFV 337
            SG  +N  KS L C  N+      E   +L+ K  +    YLG+P      +   +  +
Sbjct: 641 MSGLKVNFHKSGLVCV-NIAPSWLSEAASVLSWKVGKVPFLYLGMPIEGNSRRLSFWEPI 817

Query: 338 KERVWKKLKGWKERSLYRAGREVLVKAVAHAIPSYVM 374
             R+  +L GW  R L   GR VL+K+V  ++  Y +
Sbjct: 818 VNRIKARLTGWNSRFLSFGGRLVLLKSVLTSLSVYAL 928


>TC83226 weakly similar to PIR|G86419|G86419 probable reverse transcriptase 
           100033-105622 [imported] - Arabidopsis thaliana, partial
           (2%)
          Length = 885

 Score = 98.6 bits (244), Expect = 1e-20
 Identities = 85/287 (29%), Positives = 122/287 (41%), Gaps = 32/287 (11%)
 Frame = +3

Query: 574 WPFSSDGHYSTKSGYQFLRHGAEAVVASSSQVPSLPRADWRKLWKADAL----------- 622
           W  +  G YS KSGY  LR      + ++S   S     W+K+W    +           
Sbjct: 6   WMHNPTGIYSVKSGYNTLRTWQTQQINNTS-TSSDETLIWKKIWSLHTIPRHKVLLWRIL 182

Query: 623 ---LPVRAYLHARGLVTDPTCPRCLVALETVQHALLFCPMVQPIWFASSLGFRLAHECRV 679
              LPVR+ L  RG+   P CPRC    ET+ H  + CP+ + +WF S+L     +    
Sbjct: 183 NDSLPVRSSLRKRGIQCYPLCPRCHSKTETITHLFMSCPLSKRVWFGSNLCINFDNLPNP 362

Query: 680 HEFVSDFMQV---ADMSSLGAFLTLLYAIWMARNELCFKEKASTLEQILTHAAS------ 730
           + F++   +     D         ++Y +W ARN L   E  + LE  +   AS      
Sbjct: 363 N-FIN*LYEAIL*KDECITI*IAAIIYNLWHARN-LSVLEDQTILEMDIIQRASNCISDY 536

Query: 731 ---LTPLPP---LEGPMVPQVHRP--NT-WSRPHPGTFKINFDAAMAPTGDAGFGLVARN 781
               T  PP     G      HRP  NT W RP+ G  K+N DA +   G  G G++ R+
Sbjct: 537 KQANTQAPPSMARTGYDPRSQHRPAKNTKWKRPNLGLVKVNTDANLQNHGKWGLGIIIRD 716

Query: 782 SRGEVLAAACSSHGPAASSLLAEGLSFRWALGLAMDLGFRRVVFEID 828
             G V+AA+         +L AE  +    +  A D GF +V FE D
Sbjct: 717 EVGLVMAASTWETDGNDRALEAEAYALLTGMRFAKDCGFXKVXFEGD 857


>BG586267 weakly similar to PIR|A84888|A8 hypothetical protein At2g45230
           [imported] - Arabidopsis thaliana, partial (16%)
          Length = 794

 Score = 62.0 bits (149), Expect(2) = 4e-18
 Identities = 31/63 (49%), Positives = 44/63 (69%)
 Frame = +1

Query: 60  LIPKVKKPMHANQFRLISLCNVIFKIITKTLANRLKIILPDLICESQTAFVPGRLITDNA 119
           L+PK  +     +FR ISLCNV +KI++K L+ RLK +LP +I E+Q AF   +LI+DN 
Sbjct: 601 LVPKKLEAKRLVEFRPISLCNVAYKIVSKVLSKRLKSVLPWIITETQAAFGRRQLISDNI 780

Query: 120 LVA 122
           L+A
Sbjct: 781 LIA 789



 Score = 48.1 bits (113), Expect(2) = 4e-18
 Identities = 22/56 (39%), Positives = 33/56 (58%)
 Frame = +3

Query: 1   DVEEALFQMHPTKAPGCDGLPALFYQKFWHIIGDDVSHFCLQVLHGDIS*SIINKT 56
           +V EA+F ++P K PG DG+   F+Q+FW  +GDD++    + L        INKT
Sbjct: 423 EVREAVFDINPHKCPGPDGMNVFFFQQFWDTMGDDLTSMAQEFLRTGKLEEGINKT 590


>BG587108 similar to PIR|G96509|G9 protein F27F5.21 [imported] - Arabidopsis
           thaliana, partial (17%)
          Length = 677

 Score = 75.1 bits (183), Expect(2) = 3e-17
 Identities = 41/89 (46%), Positives = 53/89 (59%)
 Frame = +3

Query: 24  FYQKFWHIIGDDVSHFCLQVLHGDIS*SIINKTLLVLIPKVKKPMHANQFRLISLCNVIF 83
           F+Q  WHII  D+       L      + +N T + LIPK K+P    + R ISLCNV +
Sbjct: 411 FFQHSWHIIKMDLLKMVNSFLASGKLDTRLNTTNICLIPKKKRPTRMTELRPISLCNVGY 590

Query: 84  KIITKTLANRLKIILPDLICESQTAFVPG 112
           KII+K L  RLK+ LP LI E+Q+AFV G
Sbjct: 591 KIISKVLCQRLKVCLPSLISETQSAFVHG 677



 Score = 32.3 bits (72), Expect(2) = 3e-17
 Identities = 14/25 (56%), Positives = 17/25 (68%)
 Frame = +2

Query: 1   DVEEALFQMHPTKAPGCDGLPALFY 25
           +V  ALF MHP KAPG DG+  L +
Sbjct: 341 EVRLALFIMHPEKAPGPDGMTTLLF 415


>BE248682 similar to GP|18568269|gb putative gag-pol polyprotein {Zea mays},
           partial (1%)
          Length = 441

 Score = 86.7 bits (213), Expect = 4e-17
 Identities = 50/131 (38%), Positives = 68/131 (51%)
 Frame = +3

Query: 193 QEPFQPHRGLRQGDPLSPYLFILCGEVFSALINKAVLASSLHGIKIARTAPVISHLLFAD 252
           QE     RGL+QGDPL+P+LF+L  E  S L+  AV  +   G  + R    +SHL +AD
Sbjct: 3   QEEISVQRGLKQGDPLAPFLFLLVAEGISGLMKNAVNRNLFQGFDVKRGGTRVSHLQYAD 182

Query: 253 DSVIFARATVQEALSIKAILASYEQASGQVINLDKSKLSCSRNVPDDCFHELRQLLTVKA 312
           D++     TV    ++KA+L  +E ASG  +N  KS L    NVP D      + L  + 
Sbjct: 183 DTLCIGMPTVDNLWTLKALLQGFEMASGLKVNFHKSSL-IGINVPRDFMEAACRFLNCRE 359

Query: 313 VESYDKYLGLP 323
                 YLGLP
Sbjct: 360 ESIPFIYLGLP 392


>BG586862 
          Length = 804

 Score = 85.1 bits (209), Expect = 1e-16
 Identities = 66/218 (30%), Positives = 95/218 (43%), Gaps = 2/218 (0%)
 Frame = -1

Query: 613 WRKLWKADALLPVRAYLHARGLVTDPTCPRCLVALETVQHALLFCPMVQPIWFASSLG-- 670
           WR L  A   LPV+  LH RG+     CPRC   +ETVQH  L C + Q  WF S LG  
Sbjct: 612 WRLLHNA---LPVKDELHKRGIRCSLLCPRCESKIETVQHLFLNCEVTQKEWFGSQLGIN 442

Query: 671 FRLAHECRVHEFVSDFMQVADMSSLGAFLTLLYAIWMARNELCFKEKASTLEQILTHAAS 730
           F  +     H+++++F+   D  ++ A   LLY+IW ARN+  F+      + ++  A+S
Sbjct: 441 FHSSGVLHFHDWITNFILKNDEETIIALTALLYSIWHARNQKVFENIDVPGDVVIQRASS 262

Query: 731 LTPLPPLEGPMVPQVHRPNTWSRPHPGTFKINFDAAMAPTGDAGFGLVARNSRGEVLAAA 790
              L   +   V     P+                A+      G G+VARN  G  +A+ 
Sbjct: 261 --SLHSFKMAQVSDSVLPSN---------------AIPSYSLWGIGVVARNCEGLAMASG 133

Query: 791 CSSHGPAASSLLAEGLSFRWALGLAMDLGFRRVVFEID 828
                    +  AE      A+  A D GF +  FE D
Sbjct: 132 TWLRHGIPCATTAEAWGIYQAMVFAGDCGFSKFEFESD 19


>TC93101 
          Length = 675

 Score = 79.3 bits (194), Expect = 6e-15
 Identities = 60/221 (27%), Positives = 91/221 (41%), Gaps = 22/221 (9%)
 Frame = -1

Query: 623 LPVRAYLHARGLVTDPTCPRCLVALETVQHALLFCPMVQPIWFASSLGFRLAHECRVH-- 680
           LPVR  L+ RG+   P CPRC   LET  H  + C   Q +WF S L  R      ++  
Sbjct: 663 LPVRXELNKRGVNCPPLCPRCYFNLETTNHIFMSCERTQRVWFGSQLSIRFPDNSTINFS 484

Query: 681 EFVSDFMQVADMSSLGAFLTLLYAIWMARNELCFKEKASTLEQILTHA---------ASL 731
           +++ D +       +     + Y+IW ARN+  F+ +  + + I+  A         A++
Sbjct: 483 DWLFDAISNQTEEIIIKISAITYSIWHARNKAIFENQFVSEDTIIQ*AQNSILAYEQATI 304

Query: 732 TPL-PPLEGPMVPQVHRPNT----------WSRPHPGTFKINFDAAMAPTGDAGFGLVAR 780
            P  P +    +      NT          W +P     K N DA +   G  G G + R
Sbjct: 303 KPQNPNIVLSSLSATSNTNTTRRRSNVRSRWQKPLNNILKANCDANLQVQGRWGLGCIIR 124

Query: 781 NSRGEVLAAACSSHGPAASSLLAEGLSFRWALGLAMDLGFR 821
           N+ GE    A         +  AE  +   A+ LA D GF+
Sbjct: 123 NADGEAKVTATWCINGFDCAATAETYAILAAMYLAKDYGFK 1


>TC91765 weakly similar to GP|19881779|gb|AAM01180.1 Putative retroelement
           {Oryza sativa (japonica cultivar-group)}, partial (1%)
          Length = 625

 Score = 68.6 bits (166), Expect = 1e-11
 Identities = 40/99 (40%), Positives = 57/99 (57%)
 Frame = +3

Query: 248 LLFADDSVIFARATVQEALSIKAILASYEQASGQVINLDKSKLSCSRNVPDDCFHELRQL 307
           LLF    +   R     A  +K IL  YE+ SG+ I+L KS + CSRNVPD     +  +
Sbjct: 279 LLFEGAPLRSLRVEEHHAQIMKNILILYEEDSGKAISLRKS*IYCSRNVPDILKTSITYI 458

Query: 308 LTVKAVESYDKYLGLPTIIGKSKTQIFNFVKERVWKKLK 346
           L V+ +    KYLGLP++IG+ +T  F+ +K  VW+K K
Sbjct: 459 LGVQFMLGTCKYLGLPSMIGRDRTTTFSSIKGGVWQKNK 575



 Score = 61.6 bits (148), Expect(2) = 6e-12
 Identities = 31/69 (44%), Positives = 41/69 (58%)
 Frame = +2

Query: 178 CVSTVDFSIMLNGAPQEPFQPHRGLRQGDPLSPYLFILCGEVFSALINKAVLASSLHGIK 237
           CV + D+ +++N    +P  P RGL+QGD LSPY+FI+C E  S LI  A      HG  
Sbjct: 104 CVESNDYYVLVNNDAVDPIIPSRGLQQGDHLSPYIFIICVEGLSFLIPHAKERGDTHGTS 283

Query: 238 IARTAPVIS 246
           I R AP +S
Sbjct: 284 I*RGAPPVS 310



 Score = 27.7 bits (60), Expect(2) = 6e-12
 Identities = 11/29 (37%), Positives = 19/29 (64%)
 Frame = +1

Query: 144 LDMSKAYDRVEWPFLASVLQQMGFPASWV 172
           L +SK Y+RV+  +L  ++ +MGF   W+
Sbjct: 1   LYISKVYNRVD*DYLKEIMIKMGFNNRWI 87


>BQ148771 
          Length = 680

 Score = 68.6 bits (166), Expect = 1e-11
 Identities = 41/134 (30%), Positives = 59/134 (43%)
 Frame = -3

Query: 325 IIGKSKTQIFNFVKERVWKKLKGWKERSLYRAGREVLVKAVAHAIPSYVMSCFLLPDGLC 384
           ++ KS  +    V  +V   L  WK   L  A R  L K+V  A+P Y M   ++P    
Sbjct: 633 LVRKSTKKSRFSVYYQVHVMLANWKANHLSLARRVTLAKSVIEAVPLYPMMTTIIPKACI 454

Query: 385 NQIEGMISRFYWGGDVTRRGMHCLSWKDLCKAKDNGRLGFRDFKMFNSALVAKNWWRIKS 444
            +I+ +  +F WG     R  H + W+ + K K    LG R   + N A + K  W I S
Sbjct: 453 EEIQKLQRKFVWGDTEVSRRYHAVGWETMSKPKTIYGLGLRRLDVMNKACIMKLGWSIYS 274

Query: 445 NPESLMGKVYRAVY 458
              SL  +V R  Y
Sbjct: 273 GSNSLCTEVMRGKY 232


>BG646730 
          Length = 799

 Score = 66.2 bits (160), Expect = 5e-11
 Identities = 35/125 (28%), Positives = 61/125 (48%), Gaps = 2/125 (1%)
 Frame = +1

Query: 470 GYRPSYAWSSIMRSGEIFATGGMWNIGNGKSVKAWSDKWVPGTDTLVYSVGLAQHFGVSL 529
           G +PSYAW S+    ++   G  W+I NG++V+ W D W+P          +      + 
Sbjct: 388 GNQPSYAWRSMFNIKDVIDLGSRWSISNGQNVRIWKDDWLPNQTGFKVCSPMVDFEEATC 567

Query: 530 VSDLMLPGLLAWNRELINFICCPPTARAIMAIPLP--LVPHDDVLYWPFSSDGHYSTKSG 587
           +S+L+     +  R+L+  +     A+ I+ IPL   L P   +LYW    D +YS +S 
Sbjct: 568 ISELIDTNTKSSKRDLVRNVFSAFEAKQILNIPLSWRLWPDRRILYW--ERDRNYSVRSA 741

Query: 588 YQFLR 592
           +  ++
Sbjct: 742 HHLIK 756


>BG587113 weakly similar to PIR|A84888|A8 hypothetical protein At2g45230
           [imported] - Arabidopsis thaliana, partial (10%)
          Length = 767

 Score = 65.9 bits (159), Expect = 7e-11
 Identities = 60/230 (26%), Positives = 94/230 (40%), Gaps = 27/230 (11%)
 Frame = -3

Query: 467 AKRGYRPSYAWSSIMRSGEIFATGGMWNIGNGKSVKAWSDKWVPGTDTLVYSVGLAQHFG 526
           A  G   SYAW SI  +  +   G    IGNG++   W  +       +       +H  
Sbjct: 756 APLGSWASYAWRSIHSAQHLIKQGAKVIIGNGENTNIWEREMAWKLTCVTNHPN--KHSS 583

Query: 527 VSLVSDLML---------PGLLAWNRELINFICCPPTARAIMAIPLPLVPHDDVLYWPFS 577
            +  +  +          P     N  LIN I    T R I++I       +D   W +S
Sbjct: 582 RAY*APTLYGYEGCRSDDPMRRERNANLINSIFPEGTRRKILSIHPQGPIGEDSYSWEYS 403

Query: 578 SDGHYSTKSGYQFLRHGAEAVVASSSQVPSL--PRAD--WRKLWKADAL----------- 622
             GHYS KSGY    +    ++A+++Q  ++  P  D  ++++WK +             
Sbjct: 402 KSGHYSVKSGYYVQTN----IIAAANQRGTVDQPSLDDLYQRVWKYNTSPKVRHFLWRCI 235

Query: 623 ---LPVRAYLHARGLVTDPTCPRCLVALETVQHALLFCPMVQPIWFASSL 669
              LP  A + +R +  D +C RC +  ETV H L  CP  + IW  S +
Sbjct: 234 SNSLPTAANMRSRHISKDGSCSRCGMESETVNHILFQCPYARLIWATSPI 85


>BG584442 
          Length = 775

 Score = 57.0 bits (136), Expect = 3e-08
 Identities = 34/96 (35%), Positives = 54/96 (55%), Gaps = 1/96 (1%)
 Frame = +1

Query: 343 KKLKGWKERSLYRAGREVLVKAVAHAIPSYVMSCFLLPDGLCNQIEGMISRFYW-GGDVT 401
           KK+   + + L +   EV++K    +I SYVMS FLL +   ++IE +++ F W      
Sbjct: 379 KKINF*RNKCLSKVM*EVMIKYALQSISSYVMSIFLLLNSQVDEIEKIMNTFSWVHVGEN 558

Query: 402 RRGMHCLSWKDLCKAKDNGRLGFRDFKMFNSALVAK 437
           R+GMH +S + L   K+ G +GF DF  FN  ++ K
Sbjct: 559 RKGMHWMS*EKLFVHKNYGGMGFTDFTTFNIPMLGK 666


>AJ497561 weakly similar to GP|10140689|gb putative non-LTR retroelement
           reverse transcriptase {Oryza sativa (japonica
           cultivar-group)}, partial (2%)
          Length = 621

 Score = 50.4 bits (119), Expect = 3e-06
 Identities = 21/68 (30%), Positives = 34/68 (49%)
 Frame = +2

Query: 448 SLMGKVYRAVYFPRGTIRGAKRGYRPSYAWSSIMRSGEIFATGGMWNIGNGKSVKAWSDK 507
           SL+ K+ +  YFP+     A  G+ PS+ W S++ +  +   G  W IG+G  +   S  
Sbjct: 410 SLLSKILKFKYFPQWDFSYANLGHNPSFTWRSLLSTQSLLTLGHRWMIGDGSQINVSSMS 589

Query: 508 WVPGTDTL 515
           W+    TL
Sbjct: 590 WIRNRPTL 613


>BF640104 
          Length = 344

 Score = 50.4 bits (119), Expect = 3e-06
 Identities = 34/101 (33%), Positives = 46/101 (44%), Gaps = 2/101 (1%)
 Frame = -1

Query: 751 WSRPHPGTFKINFDAAMAPTGDAGFGLVARNSRGEVLAAACSSHGPAASSLLAEGLSFRW 810
           W +PH G  KIN DA +      G G++ RN  G V+A+   +       + AE      
Sbjct: 338 WIKPHQGVIKINCDANLTSEDVWGIGVITRNDNGIVMASGTWNRPGFMCPITAEAWGVYQ 159

Query: 811 ALGLAMDLGFRRVVFEIDCLLLYEAWKR--RGGCSILDSLI 849
           A   A+D GF+ V+FE D   L     R   G  S L S+I
Sbjct: 158 AALFALDQGFQNVLFENDNEKLISMLSREEEGHRSYLGSII 36


>BF631765 
          Length = 498

 Score = 47.4 bits (111), Expect = 3e-05
 Identities = 42/144 (29%), Positives = 62/144 (42%), Gaps = 4/144 (2%)
 Frame = +1

Query: 667 SSLGFRLAHECRVHEFVSDFMQVADMSSLGAFLTLLYAIWMARNELCFK--EKASTLEQI 724
           S LG  +  +  +  ++   + V +      F T L+ IW  RN+  F   +    L   
Sbjct: 25  SPLGIHVPVQLDLLSWMEKCLAVPEQRVKQLFGTSLWLIWKHRNQKVFNNVDFDPPLVSA 204

Query: 725 LTHAASLTPLPPLEGPM--VPQVHRPNTWSRPHPGTFKINFDAAMAPTGDAGFGLVARNS 782
           L    S+  LP   G +  VP+   P        G+ K+N  A     G  G+G +ARN+
Sbjct: 205 LVEEFSIANLPLKRGQVCVVPR*QPPPF------GSIKVNVGAGCFGDGSTGWGFIARNA 366

Query: 783 RGEVLAAACSSHGPAASSLLAEGL 806
            G  L+A   S G + S LLAE L
Sbjct: 367 AGLALSAETKSDGISYSPLLAECL 438


>TC82442 
          Length = 578

 Score = 47.0 bits (110), Expect = 3e-05
 Identities = 32/109 (29%), Positives = 51/109 (46%), Gaps = 4/109 (3%)
 Frame = -3

Query: 771 GDAGFGLVARNSRGEVLAAACSSHGPAASSLLAEGLSFRWALGLAMDLGFRRVVFEIDC- 829
           G  G G +  NS G+ + +A  S      +  AE  +   A+ LA+    + ++FE DC 
Sbjct: 330 GRWGLGCIIHNSAGQAMTSATWSRNGFNCAATAEAYAILAAMHLALTSDLKHMIFESDCE 151

Query: 830 ---LLLYEAWKRRGGCSILDSLILDCRRLSSGFDAFDFSFIRRTGNSVA 875
                L    ++    S L S++ +  ++S  FD   F FI R+GN VA
Sbjct: 150 AVIRKLNRGIEKDIDISYLGSVLEEIWKISEKFDMCSFRFIPRSGNRVA 4


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.325    0.139    0.444 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,392,419
Number of Sequences: 36976
Number of extensions: 535504
Number of successful extensions: 3213
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 2438
Number of HSP's successfully gapped in prelim test: 88
Number of HSP's that attempted gapping in prelim test: 725
Number of HSP's gapped (non-prelim): 2592
length of query: 906
length of database: 9,014,727
effective HSP length: 105
effective length of query: 801
effective length of database: 5,132,247
effective search space: 4110929847
effective search space used: 4110929847
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 63 (28.9 bits)