BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0150.12
(266 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC90418 similar to GP|11762174|gb|AAG40365.1 At1g17620 {Arabidop... 34 0.051
TC88555 similar to PIR|T07614|T07614 homeobox-leucine zipper pro... 33 0.11
BF004047 weakly similar to GP|15027957|gb| putative arginine/ser... 33 0.15
TC83149 similar to GP|13561982|gb|AAK30594.1 flagelliform silk p... 32 0.25
AL373859 weakly similar to PIR|A96691|A96 arginyl-tRNA synthetas... 32 0.25
TC88040 homologue to SP|Q41266|AOX2_SOYBN Alternative oxidase 2 ... 32 0.33
TC79653 similar to GP|7767671|gb|AAF69168.1| F27F5.22 {Arabidops... 32 0.33
TC84251 GP|22268004|gb|AAH26876.1 hypothetical protein MGC28888 ... 31 0.57
TC84479 ENBP1 30 0.74
AW774910 similar to GP|20127075|gb| putative bHLH transcription ... 30 0.74
TC81158 similar to GP|9280664|gb|AAF86533.1| F21B7.15 {Arabidops... 30 0.96
CB893725 weakly similar to GP|11932104|emb VP1/ABI3-like protein... 30 0.96
TC78095 weakly similar to PIR|G84776|G84776 hypothetical protein... 30 0.96
TC79449 weakly similar to GP|14423394|gb|AAK62379.1 Unknown prot... 30 0.96
BQ141768 weakly similar to GP|11036868|gb| PxORF73 peptide {Plut... 30 0.96
TC93063 similar to PIR|T08852|T08852 lustrin A - California red ... 30 1.3
TC86804 similar to GP|5725342|emb|CAA63650.1 ribosomal protein S... 30 1.3
TC93738 similar to GP|23617133|dbj|BAC20813. transcription facto... 30 1.3
TC80366 similar to GP|13877617|gb|AAK43886.1 protein kinase-like... 29 1.6
BG646273 similar to GP|15912229|gb AT4g08810/T32A17_120 {Arabido... 29 2.1
>TC90418 similar to GP|11762174|gb|AAG40365.1 At1g17620 {Arabidopsis
thaliana}, partial (9%)
Length = 835
Score = 34.3 bits (77), Expect = 0.051
Identities = 24/83 (28%), Positives = 37/83 (43%)
Frame = +1
Query: 47 PLALSLSVEPVHTTPTYMNPFHVSLSPPSPPSTFEPPLASTNDSIDSSSSRRVRRRVEKS 106
PL+ S +V V +P++++ F S SPP PPST S S+S ++ + S
Sbjct: 262 PLSTSSTVPTVLPSPSHLSNFPTSTSPPPPPST---------QSSTSTSLQKTLTNISPS 414
Query: 107 EIIPPPFPWATDRRARVYTLSHL 129
PP ++ V HL
Sbjct: 415 FTNQPPSQFSLTTSTSVKEPYHL 483
>TC88555 similar to PIR|T07614|T07614 homeobox-leucine zipper protein
homolog h1 - soybean, partial (47%)
Length = 704
Score = 33.1 bits (74), Expect = 0.11
Identities = 32/107 (29%), Positives = 43/107 (39%), Gaps = 2/107 (1%)
Frame = +3
Query: 5 TAAIYSSQLICSSISSSTKSHP--FFLSQMEMKKAENVKNNINDPLALSLSVEPVHTTPT 62
T + S + S ++S K FFL E + + L+LSLS P
Sbjct: 33 TLPLLSPEFSFSQVTSFKKQSTLVFFLVLQEQRLETMSIEKEDFGLSLSLSFPQNPPNPQ 212
Query: 63 YMNPFHVSLSPPSPPSTFEPPLASTNDSIDSSSSRRVRRRVEKSEII 109
Y+N S SP STF P S ND SS R+E+ +I
Sbjct: 213 YLNLMSSSTHSYSP-STFNPQKPSWNDVFTSSDRDSETCRIEERPLI 350
>BF004047 weakly similar to GP|15027957|gb| putative arginine/serine-rich
protein {Arabidopsis thaliana}, partial (11%)
Length = 835
Score = 32.7 bits (73), Expect = 0.15
Identities = 29/96 (30%), Positives = 42/96 (43%), Gaps = 7/96 (7%)
Frame = -3
Query: 25 HPFFLSQMEMKKAENVKNNINDPLALSLSVEPVHTTPTYMNP----FHVSLSPPSPPST- 79
H FF S + +V + + + SLS P T+P+ +P F S SPP PPST
Sbjct: 317 HNFFDSLFDSSSERSVSTSTSFSCSSSLSSSP-STSPSSRSPPPLIFPPSGSPPCPPSTS 141
Query: 80 --FEPPLASTNDSIDSSSSRRVRRRVEKSEIIPPPF 113
P T+ S + + R +S + PP F
Sbjct: 140 SSSRSPPPPTSTSPTTGTPPRSTSPSSRSALSPP*F 33
>TC83149 similar to GP|13561982|gb|AAK30594.1 flagelliform silk protein
{Argiope trifasciata}, partial (3%)
Length = 1177
Score = 32.0 bits (71), Expect = 0.25
Identities = 20/58 (34%), Positives = 32/58 (54%), Gaps = 2/58 (3%)
Frame = +3
Query: 59 TTPTYMNPFHVSLSPPSPPSTFEP--PLASTNDSIDSSSSRRVRRRVEKSEIIPPPFP 114
T+P+Y + + +PP+ PS+ P P S+ + +S SRR R K+ + PPP P
Sbjct: 21 TSPSYASRTPLRSTPPTRPSSPTPSAPRTSSRSTPSTSPSRRPR---SKTPLPPPPPP 185
>AL373859 weakly similar to PIR|A96691|A96 arginyl-tRNA synthetase [imported]
- Arabidopsis thaliana, partial (27%)
Length = 487
Score = 32.0 bits (71), Expect = 0.25
Identities = 20/61 (32%), Positives = 26/61 (41%)
Frame = -2
Query: 18 ISSSTKSHPFFLSQMEMKKAENVKNNINDPLALSLSVEPVHTTPTYMNPFHVSLSPPSPP 77
IS T F + K N NN+ P S SV P + T TYM F + + P P
Sbjct: 435 ISCITFKKASFTAPFSFIKQINQTNNLTAPTPKSFSVIPKNKTKTYMGTFWIRVLIPWKP 256
Query: 78 S 78
+
Sbjct: 255 T 253
>TC88040 homologue to SP|Q41266|AOX2_SOYBN Alternative oxidase 2
mitochondrial precursor (EC 1.-.-.-). [Soybean] {Glycine
max}, partial (82%)
Length = 1678
Score = 31.6 bits (70), Expect = 0.33
Identities = 31/97 (31%), Positives = 41/97 (41%), Gaps = 2/97 (2%)
Frame = -3
Query: 17 SISSSTKSHPFFLSQMEMKKAENVKNNINDPLALSLSVEPVHTTPTYMNPFHVSLSPPS- 75
S S +T+ HP S A NN P S P ++ + S+SPPS
Sbjct: 746 SSSKATQFHPLS*SL-----ASKSPNNSTQPRYSSFRNSPPSSSRSSR-----SISPPSL 597
Query: 76 PPSTFEPPLASTNDSIDSSSSR-RVRRRVEKSEIIPP 111
PP PLA T+ S + R R RRR + +PP
Sbjct: 596 PPMASTVPLAKTSSSSSKINLRFRHRRRDASVQFLPP 486
>TC79653 similar to GP|7767671|gb|AAF69168.1| F27F5.22 {Arabidopsis
thaliana}, partial (29%)
Length = 784
Score = 31.6 bits (70), Expect = 0.33
Identities = 23/99 (23%), Positives = 44/99 (44%), Gaps = 2/99 (2%)
Frame = +2
Query: 12 QLICSSISSSTKSHPFFLSQMEMKKAENVKNNINDPLALSLSVEPVHTTPTYMNPFHVSL 71
Q+ CS +SSS+ + +++ + + + L L V ++ P +S+
Sbjct: 395 QVQCSDLSSSSGDRLIVGKSLLLRRVVPILGVPDALVPLDLPVGQINLFPGETTALWISV 574
Query: 72 SPPS--PPSTFEPPLASTNDSIDSSSSRRVRRRVEKSEI 108
PS PP +E + T D+ SS + +VEK ++
Sbjct: 575 DVPSDQPPGQYEGEVLITATKTDAESSVQSSSKVEKRQL 691
>TC84251 GP|22268004|gb|AAH26876.1 hypothetical protein MGC28888 {Mus
musculus}, partial (2%)
Length = 726
Score = 30.8 bits (68), Expect = 0.57
Identities = 20/45 (44%), Positives = 27/45 (59%), Gaps = 1/45 (2%)
Frame = -3
Query: 47 PLALSL-SVEPVHTTPTYMNPFHVSLSPPSPPSTFEPPLASTNDS 90
PLAL L S P TT +++ +SL SPP+ PPLA+T+ S
Sbjct: 532 PLALVLGSSLPTTTTTPFVSLTPLSLLSLSPPAATIPPLATTSKS 398
>TC84479 ENBP1
Length = 5108
Score = 30.4 bits (67), Expect = 0.74
Identities = 28/112 (25%), Positives = 45/112 (40%), Gaps = 15/112 (13%)
Frame = -1
Query: 18 ISSSTKSHPFFLSQMEMKKAENVKNNINDPLA--LSLSVEPVHTTPTYMNPFHV------ 69
+++ K+ P S ME N+ + P A L L V+ PT+ +P ++
Sbjct: 929 LANGFKASPLASSLMETPPLNNISIPSSTPNAPILLLDSGTVNILPTFFSPSNLPH*LRF 750
Query: 70 -------SLSPPSPPSTFEPPLASTNDSIDSSSSRRVRRRVEKSEIIPPPFP 114
+LSPP+P PP+ T+ S RR + + PP P
Sbjct: 749 PTPLKS*ALSPPNP*KLVPPPVKFTSSSQTLP*ERRA*KLLSYKFPKQPPSP 594
>AW774910 similar to GP|20127075|gb| putative bHLH transcription factor
{Arabidopsis thaliana}, partial (18%)
Length = 712
Score = 30.4 bits (67), Expect = 0.74
Identities = 29/112 (25%), Positives = 46/112 (40%), Gaps = 4/112 (3%)
Frame = +3
Query: 5 TAAIYSSQLICSSISSSTKSHPFFL--SQMEMKKAENVKNNINDPLALSLSVEPVHTTPT 62
T I ++ ++I S+ S P FL + + N P +SLS+ ++ T T
Sbjct: 105 TTTITTTHSTITTIFSNKSSPPIFLLHGTLSTQTITNPYYGTPIPTKMSLSLITMNNTTT 284
Query: 63 YMNPFHV--SLSPPSPPSTFEPPLASTNDSIDSSSSRRVRRRVEKSEIIPPP 112
F SL+ P P S F PP+ SS+ + + + PPP
Sbjct: 285 LPLSFVTTRSLTKPPPLSCFSPPIPEV-----SSTCLLTLTPPKTTSLTPPP 425
>TC81158 similar to GP|9280664|gb|AAF86533.1| F21B7.15 {Arabidopsis
thaliana}, partial (6%)
Length = 890
Score = 30.0 bits (66), Expect = 0.96
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 1/90 (1%)
Frame = -1
Query: 8 IYSSQLIC-SSISSSTKSHPFFLSQMEMKKAENVKNNINDPLALSLSVEPVHTTPTYMNP 66
I+SS LIC SS SS++ S LS+ ++ E ++ + L+LSLS + P+ ++
Sbjct: 569 IFSSSLICPSSSSSASSSSSSSLSEPDVDDEEVELSDSDSELSLSLS----PSLPSSLSS 402
Query: 67 FHVSLSPPSPPSTFEPPLASTNDSIDSSSS 96
F + + P + ST+ SI SSS
Sbjct: 401 FPFTSTEGGSPVNV---ILSTDFSIGISSS 321
>CB893725 weakly similar to GP|11932104|emb VP1/ABI3-like protein
{Chamaecyparis nootkatensis}, partial (3%)
Length = 793
Score = 30.0 bits (66), Expect = 0.96
Identities = 23/70 (32%), Positives = 31/70 (43%), Gaps = 3/70 (4%)
Frame = +3
Query: 18 ISSSTKSHPFFLSQ--MEMKKAENVK-NNINDPLALSLSVEPVHTTPTYMNPFHVSLSPP 74
ISSS S +SQ M++ + N+ +N N+ LS S P H T NP H S
Sbjct: 33 ISSSIPSSNIDVSQQTMDISQINNIHFSNNNEQPFLSPSTHPTHNYSTSYNPMHTIPSMN 212
Query: 75 SPPSTFEPPL 84
P + L
Sbjct: 213 QPHEGYSSSL 242
>TC78095 weakly similar to PIR|G84776|G84776 hypothetical protein At2g36090
[imported] - Arabidopsis thaliana, partial (19%)
Length = 1467
Score = 30.0 bits (66), Expect = 0.96
Identities = 26/91 (28%), Positives = 36/91 (38%), Gaps = 5/91 (5%)
Frame = +3
Query: 27 FFLSQMEMKKAENVKNNINDPLALSLSVEPVHTTPTYMNP-----FHVSLSPPSPPSTFE 81
F L + NNI+ L + S +TPTY NP SPPSPP
Sbjct: 183 FLLKPFQYSNTNYQPNNIHIHLWIHQSPP---STPTYSNPTSSPDLTAHHSPPSPP---- 341
Query: 82 PPLASTNDSIDSSSSRRVRRRVEKSEIIPPP 112
PP T + +++ ++ I PPP
Sbjct: 342 PPPTFTTSAQNTTYGKKSSPPHGHLSITPPP 434
>TC79449 weakly similar to GP|14423394|gb|AAK62379.1 Unknown protein
{Arabidopsis thaliana}, partial (44%)
Length = 1486
Score = 30.0 bits (66), Expect = 0.96
Identities = 17/43 (39%), Positives = 22/43 (50%)
Frame = -3
Query: 53 SVEPVHTTPTYMNPFHVSLSPPSPPSTFEPPLASTNDSIDSSS 95
SVEP P+ +P+H S PP P + PP + N S S S
Sbjct: 623 SVEPQFQHPS--SPYHESQQPPQPQNHPNPPHLNPNQSPPSPS 501
>BQ141768 weakly similar to GP|11036868|gb| PxORF73 peptide {Plutella
xylostella granulovirus}, partial (29%)
Length = 958
Score = 30.0 bits (66), Expect = 0.96
Identities = 18/68 (26%), Positives = 28/68 (40%)
Frame = +1
Query: 16 SSISSSTKSHPFFLSQMEMKKAENVKNNINDPLALSLSVEPVHTTPTYMNPFHVSLSPPS 75
S + S SHPFF+ + PL + + P+ P+ P +PPS
Sbjct: 115 SHLRVSPPSHPFFIPSSPIP-----------PLPHPIIIHPIPIPPSKTIPNTPIFTPPS 261
Query: 76 PPSTFEPP 83
P ++ PP
Sbjct: 262 LPPSYTPP 285
>TC93063 similar to PIR|T08852|T08852 lustrin A - California red abalone,
partial (4%)
Length = 1058
Score = 29.6 bits (65), Expect = 1.3
Identities = 17/61 (27%), Positives = 27/61 (43%), Gaps = 5/61 (8%)
Frame = -1
Query: 57 VHTTPTYMNPFHVSLSPPSPPST-----FEPPLASTNDSIDSSSSRRVRRRVEKSEIIPP 111
V +TPT + + P+PPS +PP N + + R + E+ E+IP
Sbjct: 1022 VSSTPTDATASSSASASPAPPSAGAAAASDPPATLENSAAANKKRPRKSKAAEEEELIPA 843
Query: 112 P 112
P
Sbjct: 842 P 840
>TC86804 similar to GP|5725342|emb|CAA63650.1 ribosomal protein S5 {Spinacia
oleracea}, partial (75%)
Length = 1353
Score = 29.6 bits (65), Expect = 1.3
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 10/61 (16%)
Frame = +2
Query: 40 VKNNINDPLALSLSVEPVHTTPTYMNPFHV--------SLSP--PSPPSTFEPPLASTND 89
++++I PL+LS + P H + + P + SLSP PSP F PP+ ST+
Sbjct: 137 LQHSILSPLSLSDPLLPPHVSLSSPQPTNSHSHLLKPHSLSPQFPSPSKQFPPPMNSTSP 316
Query: 90 S 90
S
Sbjct: 317 S 319
>TC93738 similar to GP|23617133|dbj|BAC20813. transcription factor-like
protein {Oryza sativa (japonica cultivar-group)},
partial (11%)
Length = 448
Score = 29.6 bits (65), Expect = 1.3
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +3
Query: 56 PVHTTPTYMNPFHVSLSPPSPPSTFEPPLASTNDSIDSSSSRRVRRR 102
P+H T T P+ + P PP T P LA + + + + R + R
Sbjct: 24 PLHPTGTVQRPYGTPMLQPFPPPTPPPSLAPVSSPLPNPAISREKVR 164
>TC80366 similar to GP|13877617|gb|AAK43886.1 protein kinase-like protein
{Arabidopsis thaliana}, partial (16%)
Length = 814
Score = 29.3 bits (64), Expect = 1.6
Identities = 26/73 (35%), Positives = 30/73 (40%), Gaps = 11/73 (15%)
Frame = +3
Query: 53 SVEPVHTTPTYMNPFHVSLSPPSPPST--FEPPL---------ASTNDSIDSSSSRRVRR 101
S P TTP+ P S SPPSPP+T PP + T S D S S
Sbjct: 108 SSPPPSTTPSAPPPSTPSNSPPSPPTTPAISPPSGGGTTPSPPSRTPPSSDDSPS----- 272
Query: 102 RVEKSEIIPPPFP 114
S+ PPP P
Sbjct: 273 -PPSSKTPPPPSP 308
>BG646273 similar to GP|15912229|gb AT4g08810/T32A17_120 {Arabidopsis
thaliana}, partial (31%)
Length = 634
Score = 28.9 bits (63), Expect = 2.1
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +2
Query: 45 NDPLALSLSVEPVHTTPTYMNPFHVSLSPPSPPSTFEPPLA 85
+ P SL+ P+H + SL+P +PPST PPL+
Sbjct: 77 SSPSLPSLTNHPIHGFNLHQLSPISSLNPKTPPSTSTPPLS 199
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.321 0.133 0.416
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,346,208
Number of Sequences: 36976
Number of extensions: 210848
Number of successful extensions: 2071
Number of sequences better than 10.0: 93
Number of HSP's better than 10.0 without gapping: 1922
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2036
length of query: 266
length of database: 9,014,727
effective HSP length: 94
effective length of query: 172
effective length of database: 5,538,983
effective search space: 952705076
effective search space used: 952705076
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 57 (26.6 bits)
Lotus: description of TM0150.12