BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0143b.7
(485 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC87688 similar to GP|10177535|dbj|BAB10930. gene_id:K1F13.21~un... 40 0.002
TC89427 weakly similar to GP|4557063|gb|AAD22502.1| expressed pr... 36 0.029
BQ752016 homologue to GP|18376006|em probable ATP citrate lyase ... 36 0.038
AW257087 homologue to GP|6683126|dbj KIAA0339 protein {Homo sapi... 36 0.038
AJ388952 similar to PIR|T04526|T045 hypothetical protein F16A16.... 35 0.049
TC80893 similar to GP|4557063|gb|AAD22502.1| expressed protein {... 35 0.049
AW690594 similar to GP|23498163|emb hypothetical protein {Plasmo... 34 0.11
TC90331 weakly similar to GP|21751020|dbj|BAC03887. unnamed prot... 33 0.19
TC87401 similar to PIR|B84587|B84587 probable glutaredoxin [impo... 33 0.24
TC77337 weakly similar to GP|4019275|gb|AAC95573.1| orf 48 {Atel... 33 0.24
TC89233 homologue to GP|18734|emb|CAA36734.1|| DNA-directed RNA ... 33 0.32
AL387771 weakly similar to GP|3393011|emb| Clumping factor B {St... 32 0.42
TC86034 similar to GP|6815067|dbj|BAA90354.1 ESTs AU082210(C5365... 32 0.42
TC93172 32 0.55
BG454117 similar to GP|6437558|gb putative ATPase (ISW2-like) {A... 32 0.55
BF635925 similar to GP|8489806|gb chloroplast protein import com... 32 0.71
TC91356 similar to GP|20151585|gb|AAM11152.1 LD24077p {Drosophil... 32 0.71
BQ751138 weakly similar to GP|15991793|gb platelet binding prote... 32 0.71
BE320693 32 0.71
TC76515 homologue to SP|O82709|CALX_PEA Calnexin homolog precurs... 32 0.71
>TC87688 similar to GP|10177535|dbj|BAB10930. gene_id:K1F13.21~unknown
protein {Arabidopsis thaliana}, partial (46%)
Length = 2077
Score = 40.0 bits (92), Expect = 0.002
Identities = 39/112 (34%), Positives = 51/112 (44%), Gaps = 14/112 (12%)
Frame = -2
Query: 56 PVEMALAKKTSRKRSSRKSGSSS---SHHSKSSTSSSPLKESGP---KRVGMSKMAVPRA 109
P+ A + +S SS S S+S S S SS SSS S P SK +V +
Sbjct: 771 PISSASSSSSSSSSSSSSSISNSPAFSSSSSSSLSSSASSLSSPFS*LSSSFSKYSVNSS 592
Query: 110 TW--FSSKPPPVVLSSSSSS------LESSNSSLDSNESDPVWDKLTFYFNS 153
+ SS PPP+ S SSSS SS+SS S S P F+F++
Sbjct: 591 IFKNLSSIPPPLTFSFSSSSSSSSSLPSSSSSSSSSKSSSPSLPPFAFFFST 436
Score = 37.4 bits (85), Expect = 0.013
Identities = 33/85 (38%), Positives = 41/85 (47%)
Frame = -2
Query: 70 SSRKSGSSSSHHSKSSTSSSPLKESGPKRVGMSKMAVPRATWFSSKPPPVVLSSSSSSLE 129
S S SSSS SS+SSS K S P ++P +F S P SSSSSS
Sbjct: 549 SFSSSSSSSSSLPSSSSSSSSSKSSSP--------SLPPFAFFFSTPSK---SSSSSSNS 403
Query: 130 SSNSSLDSNESDPVWDKLTFYFNSK 154
SS SSL S+ + + F+ SK
Sbjct: 402 SSKSSLSSSSNSTRFFFSNFFPTSK 328
>TC89427 weakly similar to GP|4557063|gb|AAD22502.1| expressed protein
{Arabidopsis thaliana}, partial (50%)
Length = 753
Score = 36.2 bits (82), Expect = 0.029
Identities = 31/79 (39%), Positives = 38/79 (47%)
Frame = -2
Query: 62 AKKTSRKRSSRKSGSSSSHHSKSSTSSSPLKESGPKRVGMSKMAVPRATWFSSKPPPVVL 121
+ +S SS S SS S S SS+SSS P G S + A+ SS P
Sbjct: 536 SSSSSSSSSSSSSPSSLSSSSSSSSSSSSSLPPAPFGTGSSSGS---ASSSSSSPEKSSS 366
Query: 122 SSSSSSLESSNSSLDSNES 140
SSSSS SS+SS S+ S
Sbjct: 365 LSSSSSFTSSSSSSSSSSS 309
Score = 34.3 bits (77), Expect = 0.11
Identities = 29/83 (34%), Positives = 35/83 (41%)
Frame = -2
Query: 62 AKKTSRKRSSRKSGSSSSHHSKSSTSSSPLKESGPKRVGMSKMAVPRATWFSSKPPPVVL 121
+ +S SS S SSSS S SS +P S + P + S
Sbjct: 518 SSSSSSSPSSLSSSSSSSSSSSSSLPPAPFGTGSSSGSASSSSSSPEKSSSLSSSSSFTS 339
Query: 122 SSSSSSLESSNSSLDSNESDPVW 144
SSSSSS SS+ SL S S VW
Sbjct: 338 SSSSSS-SSSSVSLPSLFSSQVW 273
Score = 31.2 bits (69), Expect = 0.93
Identities = 26/78 (33%), Positives = 34/78 (43%)
Frame = -2
Query: 76 SSSSHHSKSSTSSSPLKESGPKRVGMSKMAVPRATWFSSKPPPVVLSSSSSSLESSNSSL 135
SSSS S SS+SSSP S S SS PP + SSS +S+SS
Sbjct: 539 SSSSSSSSSSSSSSPSSLSSSSSSSSSS---------SSSLPPAPFGTGSSSGSASSSSS 387
Query: 136 DSNESDPVWDKLTFYFNS 153
+S + +F +S
Sbjct: 386 SPEKSSSLSSSSSFTSSS 333
>BQ752016 homologue to GP|18376006|em probable ATP citrate lyase subunit 1
{Neurospora crassa}, partial (37%)
Length = 759
Score = 35.8 bits (81), Expect = 0.038
Identities = 25/74 (33%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Frame = -2
Query: 56 PVEMALAKKTSRKRSSRKSGSSSSHHSKSSTSSSPLKESGPKRVGMSKMAVPRATWFSSK 115
P M+ + RSSR S ++SS + SS S SPL P K +V + S
Sbjct: 527 PASMSPRPSKTCPRSSRPSTTASSRTAPSSPSLSPLSPRSPSTTRGPKSSVSSVSPLPSS 348
Query: 116 PP-PVVLSSSSSSL 128
PP P + SS +L
Sbjct: 347 PPSPTTVDRSSCTL 306
>AW257087 homologue to GP|6683126|dbj KIAA0339 protein {Homo sapiens},
partial (2%)
Length = 466
Score = 35.8 bits (81), Expect = 0.038
Identities = 40/149 (26%), Positives = 55/149 (36%), Gaps = 12/149 (8%)
Frame = +1
Query: 21 KGAGELTVGDPSPAKSASQRVEMQQGGDQ------GGTTPIPVE------MALAKKTSRK 68
K +T P+ AKSAS ++E+ D +T V ++ AK T K
Sbjct: 88 KAVPVVTKTAPTHAKSASSKMEVDSDSDSDSDSSSSSSTSSSVSSVKKPAVSAAKATPAK 267
Query: 69 RSSRKSGSSSSHHSKSSTSSSPLKESGPKRVGMSKMAVPRATWFSSKPPPVVLSSSSSSL 128
+ S S S S SS+SSS S SSSSSS
Sbjct: 268 KEESDSDSDSDSSSSSSSSSSSSSSSSSSS-----------------------SSSSSSS 378
Query: 129 ESSNSSLDSNESDPVWDKLTFYFNSKPIA 157
+S+ + E+ PV K S P+A
Sbjct: 379 SNSDDEEEEEEAKPVVKKTPAKSASTPVA 465
Score = 34.3 bits (77), Expect = 0.11
Identities = 27/66 (40%), Positives = 35/66 (52%), Gaps = 1/66 (1%)
Frame = +1
Query: 76 SSSSHHSKSSTSSSPLKESGPKRVGMSKMAVPRATWFSSKPPPVVLSSSSSSLE-SSNSS 134
SSSS S SS+SSS +S + +K AVP T K P S+SS +E S+S
Sbjct: 4 SSSSSSSSSSSSSSSDSDSDSESEAPAKKAVPVVT----KTAPTHAKSASSKMEVDSDSD 171
Query: 135 LDSNES 140
DS+ S
Sbjct: 172 SDSDSS 189
Score = 33.9 bits (76), Expect = 0.14
Identities = 33/112 (29%), Positives = 46/112 (40%), Gaps = 3/112 (2%)
Frame = +1
Query: 32 SPAKSASQRVEMQQGGDQGGTTPIPVEMALAKKTSRKRSSRK---SGSSSSHHSKSSTSS 88
S + S+S + + +PV A ++ SS+ S S S S SS+S+
Sbjct: 25 SSSSSSSSDSDSDSESEAPAKKAVPVVTKTAPTHAKSASSKMEVDSDSDSDSDSSSSSST 204
Query: 89 SPLKESGPKRVGMSKMAVPRATWFSSKPPPVVLSSSSSSLESSNSSLDSNES 140
S S K + A P S SSSSSS SS+SS S+ S
Sbjct: 205 SSSVSSVKKPAVSAAKATPAKKEESDSDSDSDSSSSSSSSSSSSSSSSSSSS 360
>AJ388952 similar to PIR|T04526|T045 hypothetical protein F16A16.160 -
Arabidopsis thaliana, partial (24%)
Length = 591
Score = 35.4 bits (80), Expect = 0.049
Identities = 30/73 (41%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Frame = +3
Query: 74 SGSSSSHHSKSSTSSSPLKESGPKRVGMSKMAVP---RATWFSSKPPPVVLSSSSSSLES 130
S SSSS SK T +P+ S P S P RA SS P P SSSSSS S
Sbjct: 90 SSSSSSSISKIFTFYTPISTSSPIITNASSRRAPTFPRAMSSSSSPSPSSSSSSSSS--S 263
Query: 131 SNSSLDSNESDPV 143
S+SS S + +
Sbjct: 264 SSSSFGSRLEETI 302
>TC80893 similar to GP|4557063|gb|AAD22502.1| expressed protein {Arabidopsis
thaliana}, partial (39%)
Length = 883
Score = 35.4 bits (80), Expect = 0.049
Identities = 26/69 (37%), Positives = 32/69 (45%)
Frame = -1
Query: 74 SGSSSSHHSKSSTSSSPLKESGPKRVGMSKMAVPRATWFSSKPPPVVLSSSSSSLESSNS 133
S SSSS S SS+S S S P S ++P P P+ SSS S SS S
Sbjct: 559 SSSSSSSSSSSSSSPSSSSSSSPSSSSSSPSSLP--------PAPLASGSSSGSPSSSPS 404
Query: 134 SLDSNESDP 142
S + + S P
Sbjct: 403 SPE*SSSSP 377
Score = 32.3 bits (72), Expect = 0.42
Identities = 29/70 (41%), Positives = 33/70 (46%)
Frame = -1
Query: 71 SRKSGSSSSHHSKSSTSSSPLKESGPKRVGMSKMAVPRATWFSSKPPPVVLSSSSSSLES 130
S S SSSS S S +SSS S S P A+ SS P SSS SS E
Sbjct: 559 SSSSSSSSSSSSSSPSSSSSSSPSSSSSSPSSLPPAPLASGSSSGSP----SSSPSSPE* 392
Query: 131 SNSSLDSNES 140
S+SS S+ S
Sbjct: 391 SSSSPSSSSS 362
Score = 31.2 bits (69), Expect = 0.93
Identities = 29/83 (34%), Positives = 36/83 (42%), Gaps = 4/83 (4%)
Frame = -1
Query: 57 VEMALAKKTSRKRSSRKSGSSSSHHSKSSTSSS----PLKESGPKRVGMSKMAVPRATWF 112
V + + +S SS S SSSS S SS+ SS PL S + P +
Sbjct: 562 VSSSSSSSSSSSSSSPSSSSSSSPSSSSSSPSSLPPAPLASGSSSGSPSSSPSSPE*SSS 383
Query: 113 SSKPPPVVLSSSSSSLESSNSSL 135
S SSSSSS SS+ SL
Sbjct: 382 SPSSSSSCTSSSSSSSSSSSVSL 314
>AW690594 similar to GP|23498163|emb hypothetical protein {Plasmodium
falciparum 3D7}, partial (10%)
Length = 633
Score = 34.3 bits (77), Expect = 0.11
Identities = 27/69 (39%), Positives = 34/69 (49%)
Frame = -3
Query: 70 SSRKSGSSSSHHSKSSTSSSPLKESGPKRVGMSKMAVPRATWFSSKPPPVVLSSSSSSLE 129
SS SSSS S SS+SSS S S + ++ SS SSSSS+
Sbjct: 250 SSSSPSSSSSSSSSSSSSSSSSSSSSCSSSSSSSSSSSSSSSCSSSSSSSCSSSSSSTSP 71
Query: 130 SSNSSLDSN 138
SS+SSL S+
Sbjct: 70 SSSSSLCSS 44
Score = 31.6 bits (70), Expect = 0.71
Identities = 28/76 (36%), Positives = 34/76 (43%)
Frame = -3
Query: 65 TSRKRSSRKSGSSSSHHSKSSTSSSPLKESGPKRVGMSKMAVPRATWFSSKPPPVVLSSS 124
+S SS S SSSS S SS+SSS S ++ SS SSS
Sbjct: 250 SSSSPSSSSSSSSSSSSSSSSSSSSSCSSSS-------------SSSSSSSSSSSCSSSS 110
Query: 125 SSSLESSNSSLDSNES 140
SSS SS+SS + S
Sbjct: 109 SSSCSSSSSSTSPSSS 62
Score = 28.5 bits (62), Expect = 6.0
Identities = 17/64 (26%), Positives = 26/64 (40%)
Frame = -3
Query: 26 LTVGDPSPAKSASQRVEMQQGGDQGGTTPIPVEMALAKKTSRKRSSRKSGSSSSHHSKSS 85
L++ SP+ S+S ++ + + +S S S SSS S SS
Sbjct: 259 LSISSSSPSSSSSSSSSSSSSSSSSSSSSCSSSSSSSSSSSSSSSCSSSSSSSCSSSSSS 80
Query: 86 TSSS 89
TS S
Sbjct: 79 TSPS 68
Score = 28.1 bits (61), Expect = 7.9
Identities = 23/64 (35%), Positives = 30/64 (45%)
Frame = -3
Query: 77 SSSHHSKSSTSSSPLKESGPKRVGMSKMAVPRATWFSSKPPPVVLSSSSSSLESSNSSLD 136
SSS S SS+SSS S S + ++ SS SSSSS SS+S+
Sbjct: 250 SSSSPSSSSSSSSSSSSSSSSSSSSSCSSSSSSSSSSSSSSSCSSSSSSSCSSSSSSTSP 71
Query: 137 SNES 140
S+ S
Sbjct: 70 SSSS 59
>TC90331 weakly similar to GP|21751020|dbj|BAC03887. unnamed protein product
{Homo sapiens}, partial (25%)
Length = 557
Score = 33.5 bits (75), Expect = 0.19
Identities = 28/69 (40%), Positives = 34/69 (48%), Gaps = 2/69 (2%)
Frame = +1
Query: 74 SGSSSSHHSKSSTSSSPLKESGPKRVGM--SKMAVPRATWFSSKPPPVVLSSSSSSLESS 131
S SS+S S SS+SSSP S P + S T + P P SSSSSS S
Sbjct: 340 SSSSTSSSSTSSSSSSPSSFSSPSSMSAAPSLRGSSCPTG*TRYPAPKSSSSSSSSNSPS 519
Query: 132 NSSLDSNES 140
+SS S+ S
Sbjct: 520 SSSPSSSSS 546
>TC87401 similar to PIR|B84587|B84587 probable glutaredoxin [imported] -
Arabidopsis thaliana, partial (63%)
Length = 914
Score = 33.1 bits (74), Expect = 0.24
Identities = 26/60 (43%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Frame = +3
Query: 74 SGSSSSHHSKSSTSSSPLKESGPKRVGMSKMAVP---RATWFSSKPPPVVLSSSSSSLES 130
S SSSS SK T +P+ S P S P RA SS P P SSSSSS S
Sbjct: 96 SSSSSSSISKIFTFYTPISTSSPIITNASSRRAPTFPRAMSSSSSPSPSSSSSSSSSFGS 275
>TC77337 weakly similar to GP|4019275|gb|AAC95573.1| orf 48 {Ateline
herpesvirus 3}, partial (8%)
Length = 986
Score = 33.1 bits (74), Expect = 0.24
Identities = 36/118 (30%), Positives = 48/118 (40%), Gaps = 23/118 (19%)
Frame = -2
Query: 46 GGDQGGTTPIPVEMALAKKTSRKRSSRKSGSSSSHHSKSSTS----SSPLKESGPKRVGM 101
GG + ++ +L+ ++ SS SSSS S SS+S SSP S
Sbjct: 760 GGCKASSSSSSSSSSLSSSSTPSSSSSSPPSSSSSSSSSSSSSSSWSSPSSSSSSSPFSS 581
Query: 102 SKMAVPRATWF-------------------SSKPPPVVLSSSSSSLESSNSSLDSNES 140
+ A P +F SS P P S SSSS SS+SSL S+ S
Sbjct: 580 APPAPPSGAFFELLLLLELLPYPPPSSDDNSSSPSPNAPSPSSSS--SSSSSLPSSPS 413
>TC89233 homologue to GP|18734|emb|CAA36734.1|| DNA-directed RNA polymerase
{Glycine max}, partial (21%)
Length = 648
Score = 32.7 bits (73), Expect = 0.32
Identities = 30/104 (28%), Positives = 36/104 (33%)
Frame = +3
Query: 180 PQDAQNMPSPAREENDPHVEVSGGEDQVSPIIQPDQVIGVMLPPKADVPASTFSEPSSRQ 239
PQ A+ PS A + P + S SP P P + T+S S
Sbjct: 3 PQSAKYSPSLAYSPSSPRLSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYN 182
Query: 240 LQTSPQQLQSSPQQLQQGARVALLSPHAKGGSASSKMAASSHTS 283
TSP SSPQ SP G S SS + TS
Sbjct: 183 SGTSPDYSPSSPQFSPSTG----YSPSQPGYSPSSTSQYTPQTS 302
>AL387771 weakly similar to GP|3393011|emb| Clumping factor B {Staphylococcus
aureus}, partial (5%)
Length = 473
Score = 32.3 bits (72), Expect = 0.42
Identities = 42/144 (29%), Positives = 56/144 (38%), Gaps = 7/144 (4%)
Frame = +3
Query: 7 RGATPTTFASQKRAKGAGELTVGDPSPAKSASQRVEMQQGGDQGGTTPIPVEMALAKKTS 66
RG TFA Q E G S + S S+ G D G + +S
Sbjct: 30 RGLHDQTFAPQG-GFDYSEGRSGSSSASGSDSESNSSDSGSDSGSYS-----------SS 173
Query: 67 RKRSSRKSGSSSSHHSKSSTSSSP--LKESGPKRVGMSKMAVPR-----ATWFSSKPPPV 119
R RSS S S SS S+S TSSS L+ + +S P+ +S P PV
Sbjct: 174 RSRSSDGSSSESSSDSESDTSSSSEGLESTDEDVDILSDEKEPKHQAEVCDQRTSLPIPV 353
Query: 120 VLSSSSSSLESSNSSLDSNESDPV 143
S+ + + D N+SD V
Sbjct: 354 KSLDGKSTQNAVDEKQDDNKSDAV 425
>TC86034 similar to GP|6815067|dbj|BAA90354.1 ESTs AU082210(C53655)
AU056546(S20671) AU056545(S20671) correspond to a
region of the predicted, partial (42%)
Length = 2412
Score = 32.3 bits (72), Expect = 0.42
Identities = 29/79 (36%), Positives = 35/79 (43%), Gaps = 12/79 (15%)
Frame = -3
Query: 71 SRKSGSSSSHHSKSSTSSSPLKESGPKRVGMSKMAVPRATWFSSKPP------------P 118
SR + SS +S+SS SSSPL S P + A F + PP P
Sbjct: 484 SRSFSTGSSSNSRSS-SSSPLLFSPPPLASTVTVCSDTAALFEASPPSCCCWFSRVSSSP 308
Query: 119 VVLSSSSSSLESSNSSLDS 137
SSSSS+ SS SS S
Sbjct: 307 C*SSSSSSATSSSGSSSPS 251
>TC93172
Length = 861
Score = 32.0 bits (71), Expect = 0.55
Identities = 35/167 (20%), Positives = 71/167 (41%), Gaps = 2/167 (1%)
Frame = +1
Query: 315 QAETTETAQSGGVVDDSRIEEAFGKLKRLVFDAGFIDGIRATPQLGQEVKELLAFL--LS 372
+ E TET I+ +L+ LVF + + LG+EVK LL L +
Sbjct: 82 KXEATETQSES-------IKMLLDELRDLVFSRNLLKHLPNDVTLGEEVKALLVKLNYRA 240
Query: 373 QRLDPIQADALVELQTLLVNIMATLDKALAVEQLIETKKAQVASNTNGLLPAKDEILKLT 432
L Q+ + + + +D+ ++ + + L +K +I+K
Sbjct: 241 NELSEKQSSGITDFARIFTEATVNIDEGKLGNVTLQHLNVDHKDSMSKLQASKYKIMKFD 420
Query: 433 ARKTLIAAELSSVDARLDELQREEVAAEQRVKQSLDSRIAAARVQLE 479
+++ AAE + AR +++ E++ A+ R+ + ++ + QLE
Sbjct: 421 --ESISAAE-DKIKAR--DVEIEDIKAQIRLLEEKARKVQQEKSQLE 546
>BG454117 similar to GP|6437558|gb putative ATPase (ISW2-like) {Arabidopsis
thaliana}, partial (16%)
Length = 658
Score = 32.0 bits (71), Expect = 0.55
Identities = 23/70 (32%), Positives = 35/70 (49%)
Frame = -2
Query: 26 LTVGDPSPAKSASQRVEMQQGGDQGGTTPIPVEMALAKKTSRKRSSRKSGSSSSHHSKSS 85
L G PSP+ S+S + GG +P + ++ T+R +S S SSSS S +
Sbjct: 264 LISGPPSPSPSSSPSSPATSASESGGFSPA-TSSSSSELTARATASNSS*SSSSLISSFT 88
Query: 86 TSSSPLKESG 95
SSS + +G
Sbjct: 87 CSSSDKEFTG 58
>BF635925 similar to GP|8489806|gb chloroplast protein import component
Toc159 {Pisum sativum}, partial (6%)
Length = 389
Score = 31.6 bits (70), Expect = 0.71
Identities = 27/88 (30%), Positives = 39/88 (43%), Gaps = 6/88 (6%)
Frame = -1
Query: 61 LAKKTSRKRSSRKSGSSSS------HHSKSSTSSSPLKESGPKRVGMSKMAVPRATWFSS 114
L TS RS+ S SSS+ S S+T S+ L S + + T SS
Sbjct: 299 LPSSTSTTRSTLLSASSSTAVSTWLSSSTSTTRSTLLSSSSATTLSTLLPSSTSTTLLSS 120
Query: 115 KPPPVVLSSSSSSLESSNSSLDSNESDP 142
+LSSSSS+ S+ S+ + + P
Sbjct: 119 STSTTLLSSSSSTAPSTRLSISPSTARP 36
>TC91356 similar to GP|20151585|gb|AAM11152.1 LD24077p {Drosophila
melanogaster}, partial (71%)
Length = 698
Score = 31.6 bits (70), Expect = 0.71
Identities = 32/108 (29%), Positives = 40/108 (36%), Gaps = 6/108 (5%)
Frame = +3
Query: 29 GDPSPAKSASQRVEMQQGGDQGGTTPIPVEMALAKKTSRKRSSRKSGSSSSHHSKSSTSS 88
G PSP+ + S R + + TP P + TS S +S SS S+
Sbjct: 195 GSPSPSSAVS*RPARSRAWRRFTFTPCPSRSTRSSTTSCPSSRMRS*RSSPSRSR----- 359
Query: 89 SPLKESGPKRVGMSKMAVPRATWFSSKPPP------VVLSSSSSSLES 130
P+ S P S PRA S PP L S S SL S
Sbjct: 360 -PVPVSAPASRPSSSSVTPRAMSVSVSRPPRKSLLLFALPSLSPSLAS 500
>BQ751138 weakly similar to GP|15991793|gb platelet binding protein GspB
{Streptococcus gordonii}, partial (1%)
Length = 703
Score = 31.6 bits (70), Expect = 0.71
Identities = 32/118 (27%), Positives = 42/118 (35%)
Frame = +2
Query: 3 KSRKRGATPTTFASQKRAKGAGELTVGDPSPAKSASQRVEMQQGGDQGGTTPIPVEMALA 62
K +RGA+ + A S + SAS G G ALA
Sbjct: 152 KKGRRGASGSGIGLVGGCVSASTSASASASASASASASRSGSGSGSTSGPRRGKSSPALA 331
Query: 63 KKTSRKRSSRKSGSSSSHHSKSSTSSSPLKESGPKRVGMSKMAVPRATWFSSKPPPVV 120
SR +S +S S S H +SS+ S P + A FS+ PPVV
Sbjct: 332 SH-SRPQSLSQSRSHSGHSHRSSSRISKTSPPPPHPAAAAAAAAASRRIFSNMEPPVV 502
>BE320693
Length = 440
Score = 31.6 bits (70), Expect = 0.71
Identities = 23/97 (23%), Positives = 36/97 (36%)
Frame = +3
Query: 10 TPTTFASQKRAKGAGELTVGDPSPAKSASQRVEMQQGGDQGGTTPIPVEMALAKKTSRKR 69
TPT S+ G G + + PAK +R + ++GG G T +P K
Sbjct: 3 TPTQIESENENDGVGAMEYNNRKPAKK-KRRAKKEKGGKNGDETNVPTNGKYEKNVINIG 179
Query: 70 SSRKSGSSSSHHSKSSTSSSPLKESGPKRVGMSKMAV 106
SS + KE+ ++VG K +
Sbjct: 180 DGDSYAQESSSQYFEENEDNAGKEN--EQVGRDKKKI 284
>TC76515 homologue to SP|O82709|CALX_PEA Calnexin homolog precursor. [Garden
pea] {Pisum sativum}, partial (90%)
Length = 1824
Score = 31.6 bits (70), Expect = 0.71
Identities = 32/92 (34%), Positives = 42/92 (44%), Gaps = 8/92 (8%)
Frame = -1
Query: 70 SSRKSGSSSSHHSKSSTSSSPLKESGPKRVGMSKMAVPRATWFSSKPPPVVLSSSSSSLE 129
SS SGSSSSH S S SSS + M + + + +S + LSS SS L
Sbjct: 804 SSISSGSSSSHPSGFSASSS--------IISMGASSSQSSGFTASGSGILALSSQSSGLL 649
Query: 130 SSNSSL--------DSNESDPVWDKLTFYFNS 153
SS S + + SD KL F+F+S
Sbjct: 648 SSGSGIVLEGIREGSKSSSD---RKLAFFFSS 562
Score = 30.0 bits (66), Expect = 2.1
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = +2
Query: 50 GGTTPIPVEMALAKKTSRKR--SSRKSGSSSSHHSKSSTSSSPLKESGPKR 98
GG P VE + KKT+ +R +S+ G + + K T+++P + PKR
Sbjct: 1424 GGKKPAKVEAKVEKKTNTERTETSQAGGENEDNKEKEETANAPRRR--PKR 1570
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.309 0.125 0.340
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,212,377
Number of Sequences: 36976
Number of extensions: 191501
Number of successful extensions: 2109
Number of sequences better than 10.0: 85
Number of HSP's better than 10.0 without gapping: 1462
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1785
length of query: 485
length of database: 9,014,727
effective HSP length: 100
effective length of query: 385
effective length of database: 5,317,127
effective search space: 2047093895
effective search space used: 2047093895
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 60 (27.7 bits)
Lotus: description of TM0143b.7