TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0136.12
         (245 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC88972 weakly similar to GP|5919185|gb|AAD56235.1| arabinogalac...   364  e-101
BE320198 weakly similar to GP|18461298|dbj putative arabinogalac...   249  7e-67
TC86688 similar to GP|21553523|gb|AAM62616.1 arabinogalactan pro...   209  1e-54
TC88190 weakly similar to GP|21553523|gb|AAM62616.1 arabinogalac...   203  4e-53
TC79404 weakly similar to GP|5919185|gb|AAD56235.1| arabinogalac...   202  7e-53
TC85732 weakly similar to GP|5919185|gb|AAD56235.1| arabinogalac...   197  3e-51
TC79247 weakly similar to GP|15294288|gb|AAK95321.1 AT5g60490/mu...   195  1e-50
TC77608 weakly similar to GP|15294288|gb|AAK95321.1 AT5g60490/mu...   195  1e-50
TC86975 weakly similar to GP|8570054|dbj|BAA96759.1 EST D25138(R...   186  7e-48
TC79849 similar to GP|16648847|gb|AAL25613.1 AT5g44130/MLN1_5 {A...   184  2e-47
TC88952 weakly similar to GP|21554036|gb|AAM63117.1 unknown {Ara...   158  2e-39
TC92264 similar to GP|5919185|gb|AAD56235.1| arabinogalactan pro...   153  5e-38
TC86976 similar to GP|18461298|dbj|BAB84493. putative arabinogal...   145  1e-35
TC77710 weakly similar to GP|13377782|gb|AAK20860.1 fasciclin-li...   122  1e-28
TC86537 similar to GP|13377778|gb|AAK20858.1 fasciclin-like arab...    91  4e-19
TC77641 similar to GP|21595125|gb|AAM66074.1 endosperm-specific ...    91  5e-19
TC85731 weakly similar to GP|5919185|gb|AAD56235.1| arabinogalac...    89  1e-18
TC89693 weakly similar to GP|21104633|dbj|BAB93225. hypothetical...    82  1e-16
TC85131 similar to GP|13377776|gb|AAK20857.1 fasciclin-like arab...    69  2e-12
TC86141 similar to GP|20260580|gb|AAM13188.1 unknown protein {Ar...    47  9e-06

>TC88972 weakly similar to GP|5919185|gb|AAD56235.1| arabinogalactan protein
           Pop14A9 {Populus x canescens}, partial (64%)
          Length = 1009

 Score =  364 bits (935), Expect = e-101
 Identities = 192/247 (77%), Positives = 218/247 (87%), Gaps = 4/247 (1%)
 Frame = +2

Query: 1   MKHQLFTLPLLALMFFFHSTTTLAASSPAPAPSS--SPTDIIRILKKAGGYTTLIRLLQT 58
           MKH   +  LL L+ FF STTTLA  SPAPAPS+  +PTDIIRILKKAGG+TTLIRLLQT
Sbjct: 35  MKHPFLSFTLL-LIVFFSSTTTLAQKSPAPAPSTDTAPTDIIRILKKAGGFTTLIRLLQT 211

Query: 59  TQVATQINAQLINSNAGLTFFAPNDNAFSNLKPGFLNSLNDQQKNELIQFHLLPTFVSMS 118
           TQV+TQIN+QL+NSN GLT FAPNDN+FS+LKPGFLNSL+D+QKN+LIQFHLLPTFVSMS
Sbjct: 212 TQVSTQINSQLLNSNGGLTLFAPNDNSFSSLKPGFLNSLSDEQKNKLIQFHLLPTFVSMS 391

Query: 119 NFDTLSNPVRTQAGENPDRLALNVTSSGNTVNMTTGIVNVTVGGSVYSDNQLAVYQVDKV 178
           NFDTLSNPVRTQAG++P RL LNVTSSGN VNMTTGIVNVTVGG+VY+D+QLAVYQVDKV
Sbjct: 392 NFDTLSNPVRTQAGDDPYRLGLNVTSSGNQVNMTTGIVNVTVGGTVYTDHQLAVYQVDKV 571

Query: 179 LLPRDFFVAKPPAPAPAPEKAKASKKKSADDTEGPAG-DDSAAVSVKQ-RLVWGPLAVAM 236
           LLPRDFFVAKPPAPAPAPEK K+SKKKS+D   G AG DDS AV+VKQ RL+  P+AVA 
Sbjct: 572 LLPRDFFVAKPPAPAPAPEKTKSSKKKSSDSDGGVAGDDDSGAVNVKQRRLMLVPVAVAT 751

Query: 237 VVVAAFS 243
           ++VA +S
Sbjct: 752 IIVAIYS 772


>BE320198 weakly similar to GP|18461298|dbj putative arabinogalactan-like
           protein {Oryza sativa (japonica cultivar-group)},
           partial (26%)
          Length = 441

 Score =  249 bits (636), Expect = 7e-67
 Identities = 120/147 (81%), Positives = 136/147 (91%)
 Frame = +1

Query: 56  LQTTQVATQINAQLINSNAGLTFFAPNDNAFSNLKPGFLNSLNDQQKNELIQFHLLPTFV 115
           LQTTQVATQINAQL+NSN GLT FAPNDN+FS LKPGFLNSLNDQQKNELIQFH LP+FV
Sbjct: 1   LQTTQVATQINAQLLNSNNGLTLFAPNDNSFSTLKPGFLNSLNDQQKNELIQFHELPSFV 180

Query: 116 SMSNFDTLSNPVRTQAGENPDRLALNVTSSGNTVNMTTGIVNVTVGGSVYSDNQLAVYQV 175
           ++SNFDTLSNPVRTQAG++P+RLALN+TSSG  VN+TTG+VN TVGGSV+SD+QLA+YQV
Sbjct: 181 ALSNFDTLSNPVRTQAGDDPERLALNITSSGTQVNLTTGVVNATVGGSVFSDHQLAIYQV 360

Query: 176 DKVLLPRDFFVAKPPAPAPAPEKAKAS 202
           DKVLLPRDFF+ K P PAPAPEK+K S
Sbjct: 361 DKVLLPRDFFIPKSPPPAPAPEKSKDS 441


>TC86688 similar to GP|21553523|gb|AAM62616.1 arabinogalactan protein-like
           {Arabidopsis thaliana}, partial (66%)
          Length = 986

 Score =  209 bits (531), Expect = 1e-54
 Identities = 121/247 (48%), Positives = 164/247 (65%), Gaps = 7/247 (2%)
 Frame = +2

Query: 5   LFTLPLLALMFFFHSTTTLAASSPAPAPSSSPTDIIRILKKAGGYTTLIRLLQTTQVATQ 64
           LF L +  ++  F   +   A SPAP   S P +I ++L+KAG +TT I+LL+ TQV+ +
Sbjct: 77  LFFLNVFIIVTLFQRISAQPAISPAP---SGPLNITKVLEKAGQFTTFIKLLKATQVSDR 247

Query: 65  INAQLINSNAGLTFFAPNDNAFSNLKPGFLNSLNDQQKNELIQFHLLPTFVSMSNFDTLS 124
           IN+QL NSN GLT FAP DNAFS+LK G LNS++ Q + +L+QFH+LPT  ++S F T S
Sbjct: 248 INSQLNNSNQGLTIFAPTDNAFSSLKSGTLNSISTQNQLQLLQFHILPTLYTISQFQTAS 427

Query: 125 NPVRTQAGENPD-RLALNVTSSGNTVNMTTGIVNVTVGGSVYSDNQLAVYQVDKVLLPRD 183
           NP+ TQAG + D    LNVT+SGN VN+TTG+++ TV  ++YSDNQLAVYQVD+VLLP  
Sbjct: 428 NPLHTQAGNSDDGEYPLNVTTSGNQVNVTTGVIDTTVSNTIYSDNQLAVYQVDQVLLPMA 607

Query: 184 FFVAKP---PAPAPAPEKAKASKKKS---ADDTEGPAGDDSAAVSVKQRLVWGPLAVAMV 237
            F   P   PA APAP K + S + S      ++ PA DDS+AV +   +V G    A +
Sbjct: 608 LFGQGPTAAPAEAPAPTKPEKSVRASDAPKGSSDSPA-DDSSAVGLNGYIVNG----ATL 772

Query: 238 VVAAFSS 244
            VA F++
Sbjct: 773 FVAVFAN 793


>TC88190 weakly similar to GP|21553523|gb|AAM62616.1 arabinogalactan
           protein-like {Arabidopsis thaliana}, partial (29%)
          Length = 1249

 Score =  203 bits (517), Expect = 4e-53
 Identities = 122/257 (47%), Positives = 154/257 (59%), Gaps = 34/257 (13%)
 Frame = +2

Query: 6   FTLPLLALMFFFHSTTTLAASSPAPAP--------------------------------S 33
           FTL +L    FF   TT +A SPA AP                                S
Sbjct: 161 FTLLVLFAQIFF---TTSSAQSPAAAPKAAAKPAPATPAPATAPAKPLVPSLPQPPSSDS 331

Query: 34  SSPTDIIRILKKAGGYTTLIRLLQTTQVATQINAQLINS-NAGLTFFAPNDNAFSNLKPG 92
           SS  DII+IL+KA  + TLIRLL+TTQ+  QIN+QL+ + N GLT  AP+D AFS LK G
Sbjct: 332 SSGQDIIKILRKAKSFNTLIRLLKTTQIINQINSQLVTTKNGGLTILAPDDGAFSQLKAG 511

Query: 93  FLNSLNDQQKNELIQFHLLPTFVSMSNFDTLSNPVRTQAGENPDRLALNVTSSGNTVNMT 152
           + NSL + Q+ ELIQFH+LP +VS SNFD+LSNPV T A ++P    +NVT+ GN VN++
Sbjct: 512 YFNSLGEHQQKELIQFHVLPVYVSSSNFDSLSNPVLTLASDSPSGYHMNVTAYGNNVNIS 691

Query: 153 TGIVNVTVGGSVYSDNQLAVYQVDKVLLPRDFFVAKPPAPAPAPEKAKASK-KKSADDTE 211
           TG VN T+ G VYSD  LA+Y VDKVL+P DF  +KP A APAP  AKA K  K +   +
Sbjct: 692 TGPVNATLTGIVYSDKTLAIYHVDKVLIPLDF--SKPKALAPAPSTAKAPKADKDSSSED 865

Query: 212 GPAGDDSAAVSVKQRLV 228
           G  G+ + A S    L+
Sbjct: 866 GDQGETTKATSGANNLI 916


>TC79404 weakly similar to GP|5919185|gb|AAD56235.1| arabinogalactan protein
           Pop14A9 {Populus x canescens}, partial (23%)
          Length = 1104

 Score =  202 bits (515), Expect = 7e-53
 Identities = 110/214 (51%), Positives = 153/214 (71%), Gaps = 7/214 (3%)
 Frame = +3

Query: 34  SSPTDIIRILKKAGGYTTLIRLLQTTQVATQINAQLINS-NAGLTFFAPNDNAFSNLKPG 92
           S P DI  ILKKA  ++ LIRLL+TT++ + +N+QLI + N GLT  AP+D+AFS+LK G
Sbjct: 267 SVPDDITTILKKAKTFSVLIRLLKTTEIMSSVNSQLITAKNGGLTILAPDDSAFSSLKAG 446

Query: 93  FLNSLNDQQKNELIQFHLLPTFVSMSNFDTLSNPVRTQAGENPDRLALNVTSSGNTVNMT 152
           FLNSL++ +K EL+QFH+LP +V+ SNFD+LSNPV+T AG++P RL LNV +SGN V+++
Sbjct: 447 FLNSLDENKKIELLQFHILPQYVASSNFDSLSNPVQTIAGKDPTRLPLNVYASGNNVSLS 626

Query: 153 TGIVNVTVGGSVYSDNQLAVYQVDKVLLPRDFFVAKPPAPAP----APEKAKASKKK--S 206
           TG+V  +V G VY+DN+LA+Y +DKVLLPRDFF  K PA AP    A +  KA+ K+  S
Sbjct: 627 TGVVTASVVGVVYTDNKLAIYHLDKVLLPRDFFATKAPALAPTLAAAAKAPKAANKENSS 806

Query: 207 ADDTEGPAGDDSAAVSVKQRLVWGPLAVAMVVVA 240
           ADD +    D   + +V+   + G   ++ V VA
Sbjct: 807 ADDQDQNDQDQGKSGAVRLCGILGTTLMSFVAVA 908


>TC85732 weakly similar to GP|5919185|gb|AAD56235.1| arabinogalactan protein
           Pop14A9 {Populus x canescens}, partial (23%)
          Length = 1035

 Score =  197 bits (501), Expect = 3e-51
 Identities = 111/249 (44%), Positives = 154/249 (61%), Gaps = 39/249 (15%)
 Frame = +3

Query: 1   MKHQLFTLPLLALMFFFHSTTTLAASSPAPAPS--------------------------- 33
           M   +F+  L  LMF    +  +AA++ A AP+                           
Sbjct: 51  MNQIIFSFSLFLLMFSSLYSPNIAATATATAPAQAASPKHAPAPKAASPTSTKPLVPTLP 230

Query: 34  ----SSPTDIIRILKKAGGYTTLIRLLQTTQVATQINAQLINSNAG-LTFFAPNDNAFSN 88
               S+P DI +ILKKA  +T L RLL+TTQ+   +N+QLI++ +G LT  AP+D+AFS+
Sbjct: 231 DTSDSTPDDITKILKKAKTFTILTRLLRTTQIVDNLNSQLISAKSGGLTILAPDDSAFSH 410

Query: 89  LKPGFLNSLNDQQKNELIQFHLLPTFVSMSNFDTLSNPVRTQAGENPDRLALNVTSSGNT 148
           LK GF NSLN+ +K EL+QFH+LP FV  +NFD+LSNPV T AG++P +L LN+ S G +
Sbjct: 411 LKAGFFNSLNENKKIELLQFHILPQFVDSNNFDSLSNPVETVAGKDPLKLPLNIESFGTS 590

Query: 149 VNMTTGIVNVTVGGSVYSDNQLAVYQVDKVLLPRDFFVAKPPAPAPAPE-------KAKA 201
           V+++TG+VN +V G VY DN+LA+Y++DKVLLP DFF  K PA AP  E       K K+
Sbjct: 591 VSLSTGVVNASVTGVVYQDNKLAIYRLDKVLLPLDFFGTKAPAAAPVAEAIAPKADKTKS 770

Query: 202 SKKKSADDT 210
           S ++  DDT
Sbjct: 771 SSEEDEDDT 797


>TC79247 weakly similar to GP|15294288|gb|AAK95321.1 AT5g60490/muf9_140
           {Arabidopsis thaliana}, partial (47%)
          Length = 864

 Score =  195 bits (496), Expect = 1e-50
 Identities = 112/197 (56%), Positives = 144/197 (72%), Gaps = 12/197 (6%)
 Frame = +2

Query: 19  STTTLAASSPAPAPSSSPT-------DIIRILKKAGGYTTLIRLLQTTQVATQINAQLIN 71
           ST  L  ++PA APS + T       DII IL+KA  ++ LIRLL+TTQ+  Q+N+QL++
Sbjct: 269 STVPLVPTTPAGAPSPTITVPKGPTIDIINILQKAKRFSVLIRLLKTTQLINQLNSQLVS 448

Query: 72  S---NAGLTFFAPNDNAFSNLKPGFLNSLNDQQKNELIQFHLLPTFVSMSNFDTLSNPVR 128
           S   + GLT FAP D+AFS LK GFLNSL D+QK EL+QFH L +FVS+SNFDTL+NPV+
Sbjct: 449 SPSGSGGLTIFAPEDSAFSKLKAGFLNSLTDRQKVELLQFHSLASFVSISNFDTLTNPVQ 628

Query: 129 TQAGENPDRLALNVTS-SGNTVNMTTGIVNVTVGGSVYSDNQLAVYQVDKVLLPRDFFV- 186
           TQAG++  RL LNVT+  G+ V+M TG VN TV G+VY+D++LA+YQVDKVL+P D  + 
Sbjct: 629 TQAGDDA-RLQLNVTTYGGSQVSMATGAVNATVTGTVYTDSKLAIYQVDKVLMPLDLVLP 805

Query: 187 AKPPAPAPAPEKAKASK 203
           AK PA APAP K    K
Sbjct: 806 AKAPALAPAPAKGLLPK 856


>TC77608 weakly similar to GP|15294288|gb|AAK95321.1 AT5g60490/muf9_140
           {Arabidopsis thaliana}, partial (24%)
          Length = 1163

 Score =  195 bits (496), Expect = 1e-50
 Identities = 116/287 (40%), Positives = 162/287 (56%), Gaps = 46/287 (16%)
 Frame = +1

Query: 2   KHQLFTLPLLALMFFFHSTTTLAASSPAPAPSSSP------------------------- 36
           K Q  +L LL +  F   + TLAA SPA +P  SP                         
Sbjct: 79  KKQCISLTLLVISLF--CSNTLAALSPATSPIQSPPTQPISSPTKPLVPTFPPNDNTTPE 252

Query: 37  -----TDIIRILKKAGGYTTLIRLLQTTQVATQINAQLIN-SNAGLTFFAPNDNAFSNLK 90
                TDI++ILK+A  +   +RL++TTQ+  Q+N+QL+   + GLT  AP+D+AFS LK
Sbjct: 253 TPTPTTDIVQILKQANSFNIFLRLMKTTQLINQLNSQLLTIKSGGLTILAPDDSAFSELK 432

Query: 91  PGFLNSLNDQQKNELIQFHLLPTFVSMSNFDTLSNPVRTQAGENPDRLALNVTSSGNTVN 150
           PGFLNSL++++K EL+QFH++  FVS SNFDTL+NPVRT AG  P ++ LNV S G  VN
Sbjct: 433 PGFLNSLSNEKKLELLQFHVISDFVSSSNFDTLTNPVRTLAGNKPGKVELNVISYGGNVN 612

Query: 151 MTTGIVNVTVGGSVYSDNQLAVYQVDKVLLPRDFFVAK---------PPAP------APA 195
           ++TG VN T+ G +Y+D  LA+Y+V KVL+P +F  AK          PAP      AP 
Sbjct: 613 ISTGSVNTTINGIIYTDKHLAIYKVGKVLIPSEFSPAKKIVAEVPALAPAPAIADAKAPT 792

Query: 196 PEKAKASKKKSADDTEGPAGDDSAAVSVKQRLVWGPLAVAMVVVAAF 242
           PEK K S  + +  ++      S+A+ +     W  L V +V +  F
Sbjct: 793 PEKEKPSSSEDSTTSQVVPAVTSSAMRIDMCGSWVALVVGIVFIGGF 933


>TC86975 weakly similar to GP|8570054|dbj|BAA96759.1 EST D25138(R3286)
           corresponds to a region of the predicted gene.~Similar
           to Pinus taeda, partial (32%)
          Length = 1110

 Score =  186 bits (472), Expect = 7e-48
 Identities = 107/217 (49%), Positives = 142/217 (65%), Gaps = 15/217 (6%)
 Frame = +1

Query: 20  TTTLAASSP-------APAPSSSPT----DIIRILKKAGGYTTLIRLLQTTQVATQINAQ 68
           TT  AA  P       +P+ S+  T    DI+ IL+KA  Y   IRL++TTQ+  Q+N+Q
Sbjct: 163 TTPAAAPKPLVPSLPESPSDSTPDTAGTVDIVGILRKAKAYNVFIRLMKTTQLINQLNSQ 342

Query: 69  LI-NSNAGLTFFAPNDNAFSNLKPGFLNSLNDQQKNELIQFHLLPTFVSMSNFDTLSNPV 127
           L+     GLT  AP+D+AFS LK GFLNSL+D QK EL+QFH++  +VS SNFDTL+NPV
Sbjct: 343 LLATKTGGLTILAPDDSAFSGLKAGFLNSLSDGQKLELLQFHVISDYVSSSNFDTLTNPV 522

Query: 128 RTQAGENPDRLALNVTSSGNTVNMTTGIVNVTVGGSVYSDNQLAVYQVDKVLLPRDFF-V 186
           RT AG+ P ++ LNV S G +VN++TG VN T+ G +Y+D +LA+Y+V KVLLP DFF V
Sbjct: 523 RTLAGDKPGKVELNVVSYGGSVNISTGEVNTTINGIIYTDKRLAIYKVGKVLLPMDFFSV 702

Query: 187 AKPPAPAP--APEKAKASKKKSADDTEGPAGDDSAAV 221
           AK P  AP  APE +  + K    D +     DS+ V
Sbjct: 703 AKAPGKAPSLAPEPSTDTAKAPKPDKD--TSSDSSQV 807


>TC79849 similar to GP|16648847|gb|AAL25613.1 AT5g44130/MLN1_5 {Arabidopsis
           thaliana}, partial (50%)
          Length = 814

 Score =  184 bits (468), Expect = 2e-47
 Identities = 106/221 (47%), Positives = 137/221 (61%), Gaps = 8/221 (3%)
 Frame = +3

Query: 8   LPLLALMFFFHSTTTLAASSPAPAPSSSPTDIIRILKKAGGYTTLIRLLQTTQVATQINA 67
           L L+ L      T  + A +PAPAPS  P +I  I +KAG Y  LIRLL  TQ  TQI  
Sbjct: 81  LALILLTLIPFLTPQIQAQAPAPAPSG-PINITTIFEKAGQYNFLIRLLNETQQLTQIQT 257

Query: 68  QLINSNAGLTFFAPNDNAFSNLKPGFLNSLNDQQKNELIQFHLLPTFVSMSNFDTLSNPV 127
           QL +++ G T FAP DNAF NL  G +N L+DQQK +LI +H+ P + S+S+F T+SNPV
Sbjct: 258 QLNSTSEGFTIFAPTDNAFQNLPSGAINDLSDQQKVQLILYHVTPKYYSLSDFLTVSNPV 437

Query: 128 RTQAGENPDRLALNVTSSGNTVNMTTGIVNVTVGGSVYSDNQLAVYQVDKVLLPRDFFVA 187
           RTQA        L+ TS GN VN++TG+V V +  ++     LAVYQ+DKVLLP + F A
Sbjct: 438 RTQASGKEGNWGLHFTSQGNQVNVSTGVVTVPINNALRQQFPLAVYQLDKVLLPSELFGA 617

Query: 188 KPPAPAPAPEKAKA-SKKKSADDTEGPA-------GDDSAA 220
           K P+ +PAP+ +K  SK  S+ D EG A        DDSAA
Sbjct: 618 KSPSSSPAPKSSKTPSKTPSSSDVEGDAPSPASSKKDDSAA 740


>TC88952 weakly similar to GP|21554036|gb|AAM63117.1 unknown {Arabidopsis
           thaliana}, partial (17%)
          Length = 738

 Score =  158 bits (400), Expect = 2e-39
 Identities = 92/212 (43%), Positives = 127/212 (59%), Gaps = 41/212 (19%)
 Frame = +1

Query: 3   HQLFTLPLLALMFFFHSTTTLAA-----------------------SSPAPAPSS----- 34
           +Q+F   LL L   F STT   +                       S+PAPAP+      
Sbjct: 88  NQIFLFSLLLLASIFSSTTLAQSPAAAPKAPEKPAPTKPAPAKPTPSTPAPAPAKPLVPA 267

Query: 35  ---SPT---------DIIRILKKAGGYTTLIRLLQTTQVATQINAQLINS-NAGLTFFAP 81
              SPT         DII+IL+KA  + TLIRLL+TTQ+  Q+NAQL+ + N GLT  AP
Sbjct: 268 LPQSPTTNPDASGNQDIIKILRKAKSFNTLIRLLKTTQIINQVNAQLVTTKNGGLTILAP 447

Query: 82  NDNAFSNLKPGFLNSLNDQQKNELIQFHLLPTFVSMSNFDTLSNPVRTQAGENPDRLALN 141
           +D AFS LK G+ NSL ++Q+ ELIQ+H+LP +VS SNFD+LSNPV T A ++P    +N
Sbjct: 448 DDGAFSELKAGYFNSLGERQQKELIQYHVLPEYVSSSNFDSLSNPVLTLASDSPQGFQIN 627

Query: 142 VTSSGNTVNMTTGIVNVTVGGSVYSDNQLAVY 173
           VT+ GN+VN++TG+V+ T+ G VY+  +  +Y
Sbjct: 628 VTAYGNSVNISTGVVDTTITGIVYAXIRHLLY 723


>TC92264 similar to GP|5919185|gb|AAD56235.1| arabinogalactan protein
           Pop14A9 {Populus x canescens}, partial (22%)
          Length = 1190

 Score =  153 bits (387), Expect = 5e-38
 Identities = 114/283 (40%), Positives = 156/283 (54%), Gaps = 53/283 (18%)
 Frame = +1

Query: 11  LALMFFFHSTTTLA---------ASSPAPA----------PSSSPT----------DIIR 41
           L ++  ++STTT A         AS+PAP           PS +PT          DII+
Sbjct: 130 LLILTLYYSTTTSAQISPVQSPQASTPAPGFNTVPLVPVTPSGAPTPNILPKSPSIDIIQ 309

Query: 42  ILKKAGGYTTLIRLLQTTQVATQINAQLINSNA------GLTFFAPNDNAFSNLKPGFLN 95
           ILKKA  ++ LIRLL+TTQ+  Q+N+QL+ S++      GLT FAP DNAFS LKPGFLN
Sbjct: 310 ILKKAKRFSVLIRLLKTTQLINQLNSQLVTSSSSDSSSGGLTLFAPEDNAFSKLKPGFLN 489

Query: 96  SLNDQQKNELIQFHLLPTFVSMSNFDTLSNPVRTQAGENPDR-------LALNVTSSGNT 148
           SL+D+ ++  +   +  TF+   N + L+ P+ T  G N  R         +   S G+ 
Sbjct: 490 SLSDKTQSRTVT--IPHTFLIHLNLE-LATPL-TNPGSNTSR**RQKATTLM*PLSGGSH 657

Query: 149 VNMTTGIVNVTVGGSVYSDNQLAVYQVDKVLLPRDFFV-AKPPAPAPA--------PEKA 199
           V+MTTG VN TV G+VY+DN+LA+YQVDKVL+P D  + AK PAPAP          +++
Sbjct: 658 VSMTTGTVNATVTGTVYTDNKLAIYQVDKVLVPLDLVLPAKAPAPAPVSKGDSAKPDDRS 837

Query: 200 KASKKKSADDTEG--PAGDDSAAVSVKQRLVWGPLAVAMVVVA 240
           K+S  K  DD     PA    A  S    + W  L   MV++A
Sbjct: 838 KSSSAKDDDDENNDLPAEASGAGYSNVDGM-WLALVFGMVLLA 963


>TC86976 similar to GP|18461298|dbj|BAB84493. putative arabinogalactan-like
           protein {Oryza sativa (japonica cultivar-group)},
           partial (6%)
          Length = 684

 Score =  145 bits (367), Expect = 1e-35
 Identities = 83/198 (41%), Positives = 117/198 (58%), Gaps = 33/198 (16%)
 Frame = +1

Query: 6   FTLPLLALMFFFHSTTTLAASSPAPAP--------------------------------S 33
           F+L ++  + F  +TTTL+  SPA AP                                +
Sbjct: 94  FSLAIIVSLLF-STTTTLSQLSPATAPIQPTLPAPTTPAAAPKPLVPSLPESPSDSTPDT 270

Query: 34  SSPTDIIRILKKAGGYTTLIRLLQTTQVATQINAQLI-NSNAGLTFFAPNDNAFSNLKPG 92
           +   DI+ IL+KA  +   IRL++TTQ+  Q+N+QL+     GLT  AP+D+AFS LK  
Sbjct: 271 AGTVDIVGILRKAKAFNVFIRLMKTTQLINQLNSQLLATKTGGLTILAPDDSAFSRLKAR 450

Query: 93  FLNSLNDQQKNELIQFHLLPTFVSMSNFDTLSNPVRTQAGENPDRLALNVTSSGNTVNMT 152
           FLNSL+D QK EL+QFH++  +VS SNFDTL+NPV+T AG+ P ++ LNV S G  VN++
Sbjct: 451 FLNSLSDGQKLELLQFHVISDYVSNSNFDTLTNPVKTLAGDKPGKVELNVVSYGGNVNIS 630

Query: 153 TGIVNVTVGGSVYSDNQL 170
           TG  N T+ G VY+D +L
Sbjct: 631 TGEGNTTINGIVYTDKRL 684


>TC77710 weakly similar to GP|13377782|gb|AAK20860.1 fasciclin-like
           arabinogalactan-protein 7 {Arabidopsis thaliana},
           partial (71%)
          Length = 1128

 Score =  122 bits (307), Expect = 1e-28
 Identities = 78/224 (34%), Positives = 120/224 (52%), Gaps = 13/224 (5%)
 Frame = +2

Query: 25  ASSPAPAPSSSPT----DIIRILKKAGGYTTLIRLLQTTQVATQINAQLINSNAGLTFFA 80
           A SP PAP+ +PT    ++  +L  AG + T ++ LQ+T+V      Q  N+  G+T F 
Sbjct: 164 AESPTPAPAPAPTPDFVNLTELLTVAGPFHTFLQYLQSTKVLDTFQNQANNTEEGITIFV 343

Query: 81  PNDNAFSNLKPGFLNSLNDQQKNELIQFHLLPTFVSMSNFDTLSNPVRTQAGENPDRLAL 140
           P D++F++LK   L+ L D +  ++I FH LP F S+++F  LS    T      D   L
Sbjct: 344 PKDSSFASLKKPSLSKLKDDEIKQVILFHALPHFYSLADFKNLSQTASTPTFAGGD-YTL 520

Query: 141 NVTSSGNTVNMTTGIVNVTVGGSVYSDNQLAVYQVDKVLLPRDFFVAKPP---APAPAPE 197
           N T +  TV + +G     V  +V++ + +A+YQVDKVLLP   F    P   APAP PE
Sbjct: 521 NFTDNSGTVKINSGWSITKVTSAVHATDPVAIYQVDKVLLPEAIFGTDIPPVLAPAPTPE 700

Query: 198 KAKAS---KKKSAD---DTEGPAGDDSAAVSVKQRLVWGPLAVA 235
            A A+    ++SAD    +   + D S++  +    +WG L +A
Sbjct: 701 IAPAADSPTEQSADSKSSSPSSSPDRSSSYKIVSYGIWGNLVLA 832


>TC86537 similar to GP|13377778|gb|AAK20858.1 fasciclin-like
           arabinogalactan-protein 2 {Arabidopsis thaliana},
           partial (57%)
          Length = 1422

 Score = 90.9 bits (224), Expect = 4e-19
 Identities = 67/217 (30%), Positives = 111/217 (50%), Gaps = 15/217 (6%)
 Frame = +3

Query: 25  ASSPAPAPSSSPTDI--IRILKKAG--GYTTLIRLLQTTQVATQINAQLINSNAGLTFFA 80
           +S+ A AP+++P+DI  I I+ K G   +  L+R+ +      +      + + GLT F 
Sbjct: 510 SSADAEAPTAAPSDIDLIGIMSKQGCQSFADLLRVSKALPTFKE------SVDGGLTVFC 671

Query: 81  PNDNAFSNLKPGFLNSLNDQQKNELIQFHLLPTFVSMSNFDTLSNPVRTQAGENPDRLAL 140
           P D A S     + N L D QK  L+ +H +P + S+    + +  + T A E  ++   
Sbjct: 672 PTDTAVSGFSAKYKN-LTDSQKVSLLLYHGVPVYQSLQMLKSNNGVMNTLATEGHNKYDF 848

Query: 141 NVTSSGNTVNMTTGIVNVTVGGSVYSDNQLAVYQVDKVLLPRDFFVA----KPPAPAPAP 196
            V + G  VN+ T +    + G++   +   VY++ KVL+PR+ F      K  APA +P
Sbjct: 849 TVQNDGEDVNLETKVNTANIVGTLIDQDPFVVYKISKVLMPRELFKGVKEEKDLAPAESP 1028

Query: 197 E--KAKASKKKSA----DDTEGPA-GDDSAAVSVKQR 226
           +  K+KA KKK+A    +D + PA G D+ A S  Q+
Sbjct: 1029KAAKSKAKKKKAAPAADEDADSPADGPDADADSDDQK 1139


>TC77641 similar to GP|21595125|gb|AAM66074.1 endosperm-specific
           protein-like protein {Arabidopsis thaliana}, partial
           (82%)
          Length = 1488

 Score = 90.5 bits (223), Expect = 5e-19
 Identities = 56/183 (30%), Positives = 91/183 (49%), Gaps = 3/183 (1%)
 Frame = +2

Query: 29  APAPSSSPTDIIRILKKAGGYTTLIRLLQTTQVATQINAQLINSNAGLTFFAPNDNAFSN 88
           AP PSSS  ++  +++KAG   T   L+ +  +     +    ++ GLT FAPND AF  
Sbjct: 548 APPPSSS-VNLTALIEKAG-CKTFASLISSNGLIKTFQS---TADKGLTIFAPNDEAFKA 712

Query: 89  LKPGFLNSLNDQQKNELIQFHLLPTFVSMSNFDTLSNPVRTQAGENPDRLALNVTSSGNT 148
                L  L++ +   L+Q+H    ++ + +  T  +P+ + A     +    VT++G++
Sbjct: 713 KGVPDLTKLSNAELVSLLQYHAAAKYLPIGSLKTTKDPISSLATNGAGKFDYTVTTAGDS 892

Query: 149 VNMTTGIVNVTVGGSVYSDNQLAVYQVDKVLLPRDFFVAKP---PAPAPAPEKAKASKKK 205
           V + TG+ +  +  S+     LA+Y VD VLLP + F   P   P PA AP    AS   
Sbjct: 893 VTLHTGVDSSRIADSILDSTPLAIYSVDSVLLPSELFATSPSPAPEPAGAPSPTPASAPS 1072

Query: 206 SAD 208
            AD
Sbjct: 1073PAD 1081


>TC85731 weakly similar to GP|5919185|gb|AAD56235.1| arabinogalactan protein
           Pop14A9 {Populus x canescens}, partial (23%)
          Length = 684

 Score = 89.4 bits (220), Expect = 1e-18
 Identities = 53/122 (43%), Positives = 73/122 (59%), Gaps = 8/122 (6%)
 Frame = -3

Query: 127 VRTQAGENPDRLALNVTSSGNTVNMTTGIVNVTVGGSVYSDNQLAVYQVDKVLLPRDFFV 186
           V T AG++P +L LN+ S G +V+++TG+VN +V G VY DN+LA+Y++DKVLLP DFF 
Sbjct: 553 VETVAGKDPLKLPLNIESFGTSVSLSTGVVNASVTGVVYQDNKLAIYRLDKVLLPLDFFG 374

Query: 187 AKPPAPAPAPE-------KAKASKKKSADDTEGPAGDDSAAVSVK-QRLVWGPLAVAMVV 238
            K PA AP  E       K K+S ++  DDT       S A  +  Q   +  + VA V 
Sbjct: 373 TKAPAAAPVAEAIAPKADKTKSSSEEDEDDTTTQDKKSSGANLLGIQGTAYISIGVAFVA 194

Query: 239 VA 240
           VA
Sbjct: 193 VA 188


>TC89693 weakly similar to GP|21104633|dbj|BAB93225. hypothetical
           protein~similar to Arabidopsis thaliana chromosome 3
           At3g46550, partial (53%)
          Length = 1346

 Score = 82.4 bits (202), Expect = 1e-16
 Identities = 60/201 (29%), Positives = 101/201 (49%), Gaps = 4/201 (1%)
 Frame = +1

Query: 5   LFTLPLLALMFFFHSTTTLAASSPAPAPSSSPTDIIRILKKAGGYTTLIRLLQTTQVATQ 64
           +FT+  L + + F     L AS   P   S   +I + L  A  +     +L  + VA +
Sbjct: 538 IFTVDSLLIPYGFD----LMASETRP---SILLNITKTLIDAHNFNVAASMLSASSVANE 696

Query: 65  INAQLINSNAGLTFFAPNDNAFSNLKP-GFLNSLNDQQKNELIQFHLLPTFVSMSNFDTL 123
             A      +G+T F P D+AF++L P G L SL   QK  +++ H+L  +  + +  + 
Sbjct: 697 FEAG--EGGSGITLFIPVDDAFADLPPSG*LQSLPADQKAAVLKAHVLRAYYPLGSLQST 870

Query: 124 SNPVR-TQAGE--NPDRLALNVTSSGNTVNMTTGIVNVTVGGSVYSDNQLAVYQVDKVLL 180
           +NP++ T A E        LN+++   +V + TGIV   +  +V+  N +A++ V KVLL
Sbjct: 871 ANPLQPTLATEAMGAGSFTLNISTFNGSVAINTGIVQAIITQTVFDQNPIAIFGVSKVLL 1050

Query: 181 PRDFFVAKPPAPAPAPEKAKA 201
           PR+ F   P   A +P ++ A
Sbjct: 1051PREIFGKNPIVSAKSPPESSA 1113


>TC85131 similar to GP|13377776|gb|AAK20857.1 fasciclin-like
           arabinogalactan-protein 1 {Arabidopsis thaliana},
           partial (61%)
          Length = 888

 Score = 68.9 bits (167), Expect = 2e-12
 Identities = 46/172 (26%), Positives = 77/172 (44%)
 Frame = +1

Query: 24  AASSPAPAPSSSPTDIIRILKKAGGYTTLIRLLQTTQVATQINAQLINSNAGLTFFAPND 83
           AA +P PAPS      + ++    G       L T   A       I+   GL+ F P D
Sbjct: 391 AAEAPTPAPSQQN---LTVIMSKHGCKIFAETLSTFHEAFNTFTDAIDG--GLSVFCPAD 555

Query: 84  NAFSNLKPGFLNSLNDQQKNELIQFHLLPTFVSMSNFDTLSNPVRTQAGENPDRLALNVT 143
           +AF    P F N L    K +L++FH +P + S+    + +  + T A E        V 
Sbjct: 556 DAFKAFLPKFKN-LTMSGKIDLLEFHGVPIYNSIPMLKSNNGLMHTLATEGASNYDFTVQ 732

Query: 144 SSGNTVNMTTGIVNVTVGGSVYSDNQLAVYQVDKVLLPRDFFVAKPPAPAPA 195
           + G  + + T  V   +  ++  +  LA+Y + K LLP++    + P+P+P+
Sbjct: 733 NDGEEITLKTKRVTAKIIDTIIDEQPLAIYTISKGLLPQELLKGEAPSPSPS 888


>TC86141 similar to GP|20260580|gb|AAM13188.1 unknown protein {Arabidopsis
            thaliana}, partial (82%)
          Length = 1876

 Score = 46.6 bits (109), Expect = 9e-06
 Identities = 45/172 (26%), Positives = 77/172 (44%), Gaps = 15/172 (8%)
 Frame = +3

Query: 25   ASSPAPAPSS---------SPTDIIRILKKAGGYTTLIRLL-QTTQVATQINAQLINSNA 74
            A +PAP P              D I+ L   GGY  +  +L   T +AT++  +L++   
Sbjct: 933  APAPAPGPGGPRHHFNGERQVKDFIQTLLHYGGYNEMADILVNLTSLATEMG-RLVSEGY 1109

Query: 75   GLTFFAPNDNAFSNLKPGFLNSLNDQQKNELIQFHLLPTFVSMSNFDTLSNPVRTQAGEN 134
             LT  APND A + L    L+     +  ++I +H++P +      +++ N VR     +
Sbjct: 1110 VLTVLAPNDEAMAKLTTDQLSEPGAPE--QIIYYHIIPEY---QTEESMYNAVRRFGKIS 1274

Query: 135  PDRLALN----VTSSGNTVNMTTGIVNVTV-GGSVYSDNQLAVYQVDKVLLP 181
             D L L        S  +V    G  +  +    +Y+D +++V  +D VLLP
Sbjct: 1275 YDTLRLPHKVVAQESDGSVKFGHGDSSAYLFDPDIYTDGRISVQGIDGVLLP 1430


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.316    0.130    0.368 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,522,384
Number of Sequences: 36976
Number of extensions: 90582
Number of successful extensions: 1104
Number of sequences better than 10.0: 71
Number of HSP's better than 10.0 without gapping: 960
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1066
length of query: 245
length of database: 9,014,727
effective HSP length: 94
effective length of query: 151
effective length of database: 5,538,983
effective search space: 836386433
effective search space used: 836386433
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 57 (26.6 bits)