Lotus
BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0135.3
         (361 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC84316 weakly similar to GP|11994612|dbj|BAB02749. gb|AAC24186....   145  2e-35
TC89353 weakly similar to GP|9279704|dbj|BAB01261.1 gb|AAF25964....   119  2e-27
AW696629                                                              113  1e-25
AW257162                                                              100  1e-21
BG649101 homologue to GP|6648199|gb|A unknown protein {Arabidops...    97  1e-20
BQ148450 similar to GP|10177464|dbj gb|AAD21700.1~gene_id:MQB2.1...    89  3e-18
TC92509 weakly similar to PIR|T49129|T49129 hypothetical protein...    88  6e-18
TC81203 weakly similar to GP|10177464|dbj|BAB10855. gb|AAD21700....    82  4e-16
TC82343 similar to GP|10177628|dbj|BAB10775. gb|AAF30317.1~gene_...    79  4e-15
TC81493 weakly similar to PIR|F86249|F86249 protein F25C20.23 [i...    77  1e-14
CA921015 homologue to SP|Q8Y7G1|DPO3 DNA polymerase III polC-typ...    75  4e-14
CA920710 similar to PIR|S64314|S643 probable membrane protein YG...    75  4e-14
CA917238 weakly similar to PIR|A84538|A845 hypothetical protein ...    73  1e-13
BG646382                                                               73  1e-13
TC84657 weakly similar to GP|9294656|dbj|BAB03005.1 gb|AAF30317....    72  3e-13
TC84924 weakly similar to PIR|F96545|F96545 hypothetical protein...    72  3e-13
TC84199 similar to GP|9294656|dbj|BAB03005.1 gb|AAF30317.1~gene_...    70  2e-12
TC89815                                                                69  3e-12
BF632054 similar to GP|10177628|dbj gb|AAF30317.1~gene_id:K6M13....    68  6e-12
TC91177 similar to GP|9294656|dbj|BAB03005.1 gb|AAF30317.1~gene_...    57  6e-11

>TC84316 weakly similar to GP|11994612|dbj|BAB02749.
           gb|AAC24186.1~gene_id:MGL6.4~strong similarity to
           unknown protein {Arabidopsis thaliana}, partial (10%)
          Length = 892

 Score =  145 bits (367), Expect = 2e-35
 Identities = 110/305 (36%), Positives = 160/305 (52%), Gaps = 15/305 (4%)
 Frame = +3

Query: 2   EPPQFLPEELRLEILSWLPVKSLVRFRCVSKSWKSIISDSQFIKLH-----LHRSSSTTR 56
           +P  FLPEEL + IL  LPV+SL+RF+CV KSWK++ SD+ F   H     ++       
Sbjct: 27  KPLPFLPEELIVIILLRLPVRSLLRFKCVCKSWKTLFSDTHFANNHFLISTVYPQLVACE 206

Query: 57  NTDFAYLQSLITSPRKS--RSASTIAIP------DDYDFCGTCNGLVCLHSSKYDRKDKY 108
           +        + T P +S   ++ST  IP        Y   G+CNG +CL+       D Y
Sbjct: 207 SVSAYRTWEIKTYPIESLLENSSTTVIPVSNTGHQRYTILGSCNGFLCLY-------DNY 365

Query: 109 TSHVRLWNPAMRSMSQRSPPLYLPIVYDSYFGFDYDSSTDTYKVVAVAVALSWDTLETMV 168
              VRLWNP++   S+ SP +   I    Y+GF YD     YK++AV  A S  T ETM 
Sbjct: 366 QRCVRLWNPSINLKSKSSPTIDRFI----YYGFGYDQVNHKYKLLAVK-AFSRIT-ETM- 524

Query: 169 NVYNIGDDTCWRTIPVSHLPSM-YLKDDDAVYVNNTLNRLAILPNVEDRD-RCTILSFDF 226
            +Y  G+++C + + V   P     +     +V+ TLN +     V++RD R TILSFD 
Sbjct: 525 -IYTFGENSC-KNVEVKDFPRYPPNRKHLGKFVSGTLNWI-----VDERDGRATILSFDI 683

Query: 227 GKESCAQLPLPYCPQSRYDFYRTWPTLGVLRDCLCICQKDKNMHFVVWQMKEFGLYKSWT 286
            KE+  Q+ L   PQ  Y  Y   P L VL +C+C+C    +  + +W MK++G+ +SWT
Sbjct: 684 EKETYRQVLL---PQHGYAVYS--PGLYVLSNCICVCTSFLDTRWQLWMMKKYGVAESWT 848

Query: 287 LLFNI 291
            L +I
Sbjct: 849 KLMSI 863


>TC89353 weakly similar to GP|9279704|dbj|BAB01261.1
           gb|AAF25964.1~gene_id:MYA6.2~similar to unknown protein
           {Arabidopsis thaliana}, partial (10%)
          Length = 1482

 Score =  119 bits (297), Expect = 2e-27
 Identities = 113/380 (29%), Positives = 169/380 (43%), Gaps = 26/380 (6%)
 Frame = +3

Query: 7   LPEELRLEILSWLPVKSLVRFRCVSKSWKSIISDSQFIKLHLHRSSSTTRNTDF------ 60
           +PEE+ +EIL  LPV+SL++FRCV K WK++ISD QF K H+  S++  +          
Sbjct: 105 MPEEIIVEILLRLPVRSLLQFRCVCKLWKTLISDPQFAKKHVSISTAYPQLVSVFVSIAK 284

Query: 61  AYLQSLITSPRKSRSASTIAIPDDYD--------FCGTCNGLVCLHSSKYDRKDKYTSHV 112
             L S    P     ++    P D++          G+CNGL+CL        D Y    
Sbjct: 285 CNLVSYPLKPLLDNPSAHRVEPADFEMIHTTSMTIIGSCNGLLCL-------SDFY--QF 437

Query: 113 RLWNPAMRSMSQRSPPLYLPIVYDS----YFGFDYDSSTDTYKVVAVAV-ALSWDTLETM 167
            LWNP+++  S+ SP +     +DS    Y GF YD   D YKV+AV     + D  +T+
Sbjct: 438 TLWNPSIKLKSKPSPTIIAFDSFDSKRFLYRGFGYDQVNDRYKVLAVVQNCYNLDETKTL 617

Query: 168 VNVYNIGDDTCWRTIPVSHLPSMYLKDDDAVYVNNTLNRLAILPNVEDRDRCTILSFDFG 227
           +  +   D T  +  P         +     +V+  LN +          +  I+ FD  
Sbjct: 618 IYTFGGKDWTTIQKFPCDPSRCDLGRLGVGKFVSGNLNWIV--------SKKVIVFFDIE 773

Query: 228 KESCAQLPLPYCPQSRYDFYRTWPTLGVLRDCLCICQKDKN-MHFVVWQMKEFGLYKSWT 286
           KE+  ++ LP       D+      L V  + + +     N  H+VVW MKE+G+ +SWT
Sbjct: 774 KETYGEMSLP------QDYGDKNTVLYVSSNRIYVSFDHSNKTHWVVWMMKEYGVVESWT 935

Query: 287 LLFNIAGYAYDIP---CRFFAMYMSENGDALLL---SKLAVSQPQAVLYTQKDNKLEVTD 340
            L  I       P   C   A+++SE+G  L+    SKL+V           D  L+   
Sbjct: 936 KLMIIPQDKLTSPGPYCLSDALFISEHGVLLMRPQHSKLSVYN------LNNDGGLDYCT 1097

Query: 341 VANYIFNCYAMNYIESLVPP 360
             +  F  Y   Y ESLV P
Sbjct: 1098TISGQFARYLHIYNESLVSP 1157


>AW696629 
          Length = 663

 Score =  113 bits (283), Expect = 1e-25
 Identities = 69/192 (35%), Positives = 92/192 (46%), Gaps = 15/192 (7%)
 Frame = +2

Query: 4   PQFLPEELRLEILSWLPVKSLVRFRCVSKSWKSIISDSQFIKLHLHRSSSTTRN------ 57
           P  LP +L ++ILSWLPVK L+RF  VSK WKS+I D  F KLHL +S   T        
Sbjct: 56  PPILPSDLIMQILSWLPVKLLIRFTSVSKHWKSLILDPNFAKLHLQKSPKNTHMILTALD 235

Query: 58  --------TDFAYLQSLITSPRKSRSASTIAIPDDYDFCGTCNGLVCLHSSKYDRKDKYT 109
                   T +     L+     S           Y   G+ NGLVCL   K     KY 
Sbjct: 236 DEDDTWVVTPYPVRSLLLEQSSFSDEECCCFDYHSYFIVGSTNGLVCLAVEKSLENRKYE 415

Query: 110 SHVRLWNPAMRSMSQRSPPLYLPIVYDSYFGFDYDSSTDTYKVVAVAVALSWD-TLETMV 168
             ++ WNP++R  S+++P L + +   +  GF YD   DTYK    AVA+ WD T   M 
Sbjct: 416 LFIKFWNPSLRLRSKKAPSLNIGLYGTARLGFGYDDLNDTYK----AVAVFWDHTTHKME 583

Query: 169 NVYNIGDDTCWR 180
              +   D+CW+
Sbjct: 584 GRVHCMGDSCWK 619


>AW257162 
          Length = 728

 Score =  100 bits (248), Expect = 1e-21
 Identities = 61/167 (36%), Positives = 95/167 (56%), Gaps = 19/167 (11%)
 Frame = +1

Query: 8   PEELRLEILSWLPVKSLVRFRCVSKSWKSIISDSQFIKLHLHRSSSTTRN-------TDF 60
           P+++  EILSWL VK+L++ +CVSKSW ++ISDS F+K+HL+RS+  +++        D+
Sbjct: 130 PDDIIAEILSWLTVKTLMKMKCVSKSWNTLISDSNFVKMHLNRSARHSQSYLVSEHRGDY 309

Query: 61  AYLQSLITSPRKSRSASTIAIPDDYDF----------CGTCNGLVCLHSSKYDRKDKYTS 110
            ++   +      RS   I +P D  +           G+CNGLVCL     D ++    
Sbjct: 310 NFVPFSVRGLMNGRS---ITLPKDPYYQLIEKDCPGVVGSCNGLVCLSGCVADVEEFEEM 480

Query: 111 HVRLWNPAMRSMSQRSPPLYLPI--VYDSYFGFDYDSSTDTYKVVAV 155
            +R+WNPA R++S +   LY     +    F F YD++T TYKVVA+
Sbjct: 481 WLRIWNPATRTISDK---LYFSANRLQCWEFMFGYDNTTQTYKVVAL 612


>BG649101 homologue to GP|6648199|gb|A unknown protein {Arabidopsis
           thaliana}, partial (3%)
          Length = 799

 Score = 96.7 bits (239), Expect = 1e-20
 Identities = 71/234 (30%), Positives = 118/234 (50%), Gaps = 28/234 (11%)
 Frame = +1

Query: 4   PQFLPEELRLEILSWLPVKSLVRFRCVSKSWKSIISDSQFIKLHLHRSSS---------- 53
           P  +P +L   IL++LPVK++ + + VSKSW ++I+   FIK+HL++SS           
Sbjct: 76  PVVIPSDLIAIILTFLPVKTITQLKLVSKSWNTLITSPSFIKIHLNQSSQNPNFILTPSR 255

Query: 54  ---TTRNTDFAYLQSLITSPRKSRSASTIAIPDDYDF--CGTCNGLVCLHSSKYDRKDKY 108
              +  N     +  L+T    S       + +D+ F   G+CNGL+CL       K ++
Sbjct: 256 KQYSINNVLSVPIPRLLTGNTVSGDTYHNILNNDHHFRVVGSCNGLLCLLF-----KSEF 420

Query: 109 TSHV----RLWNPAMRSMSQ------RSPPLYLPIVYDSYFGFDYDSSTDTYKVVAVAVA 158
            +H+    R+WNPA R++S+      +  PL+  +   S F F  D    TYK+VA+   
Sbjct: 421 ITHLKFRFRIWNPATRTISEELGFFRKYKPLFGGV---SRFTFGCDYLRGTYKLVALHTV 591

Query: 159 LSWDTLETMVNVYNIGD---DTCWRTIPVSHLPSMYLKDDDAVYVNNTLNRLAI 209
              D + + V V+N+G+   D CWR IP   + +      D V+++ T N L++
Sbjct: 592 EDGDVMRSNVRVFNLGNDDSDKCWRNIPNPFVCA------DGVHLSGTGNWLSL 735


>BQ148450 similar to GP|10177464|dbj gb|AAD21700.1~gene_id:MQB2.18~similar to
           unknown protein {Arabidopsis thaliana}, partial (9%)
          Length = 666

 Score = 88.6 bits (218), Expect = 3e-18
 Identities = 69/198 (34%), Positives = 103/198 (51%), Gaps = 22/198 (11%)
 Frame = +3

Query: 7   LPEELRLEILSWLPVKSLVRFRCVSKSWKSIISDSQFIKLHLHRSSSTTRNTDFAY---- 62
           LP E+++EILS LPVK L++F+CV K WKS IS   F+K HL R S+T       +    
Sbjct: 3   LPFEIQVEILSRLPVKYLMQFQCVCKLWKSQISKPDFVKKHL-RVSNTRHLFLLTFSKLS 179

Query: 63  ---------LQSLIT--SPRKSRSASTIAIPDDYD-FCGTCNGLVCLHSSKYDRKDKYTS 110
                    L S+ T  +P  ++    +   D+ D   G+C+G++C+  +         S
Sbjct: 180 PELVIKSYPLSSVFTEMTPTFTQLEYPLNNRDESDSMVGSCHGILCIQCN--------LS 335

Query: 111 HVRLWNPAMRSMSQRSPPLYLP--IVYDSYFGFDYDSSTDTYKVVAVAVALSWDT----L 164
              LWNP++R  + + P    P     +  + F YD S+DTYKVVAV    + D     L
Sbjct: 336 FPVLWNPSIRKFT-KLPSFEFPQNKFINPTYAFGYDHSSDTYKVVAVFCTSNIDNGVYQL 512

Query: 165 ETMVNVYNIGDDTCWRTI 182
           +T+VNV+ +G + CWR I
Sbjct: 513 KTLVNVHTMGTN-CWRRI 563


>TC92509 weakly similar to PIR|T49129|T49129 hypothetical protein F26G5.80 -
           Arabidopsis thaliana, partial (8%)
          Length = 858

 Score = 87.8 bits (216), Expect = 6e-18
 Identities = 79/250 (31%), Positives = 115/250 (45%), Gaps = 22/250 (8%)
 Frame = +3

Query: 3   PPQFLPEELRLEILSWLPVKSLVRFRCVSKSWKSIISDSQFIKLHLHRSSS----TTRNT 58
           P   LP EL  EIL  LPVK L + RC+ KS+ S+ISD +F K HLH S++      R+ 
Sbjct: 162 PLPTLPFELVAEILCRLPVKLLXQLRCLCKSFNSLISDPKFAKKHLHSSTTPHHLILRSN 341

Query: 59  DFAYLQSLITSPRKS-RSASTIAIP---------------DDYDFCGTCNGLVCLHSSKY 102
           + +   +LI SP +S  S ST+ +P                 Y++C +C+G++CL +   
Sbjct: 342 NGSGRFALIVSPIQSVLSTSTVPVPQTQLTYPTCLTEEFASPYEWC-SCDGIICLTTD-- 512

Query: 103 DRKDKYTSHVRLWNPAMRSMSQRSPPLYLPIVY--DSYFGFDYDSSTDTYKVVAVAVALS 160
                Y+S V LWNP +       P  Y+ +       F F YD   D YKV A+   + 
Sbjct: 513 -----YSSAV-LWNPFINKFKTLPPLKYISLKRSPSCLFTFGYDPFADNYKVFAITFCVK 674

Query: 161 WDTLETMVNVYNIGDDTCWRTIPVSHLPSMYLKDDDAVYVNNTLNRLAILPNVEDRDRCT 220
                T V V+ +G  + WR I     PS     D  ++V   ++ L        R+   
Sbjct: 675 ----RTTVEVHTMGTSS-WRRI--EDFPSWSFIPDSGIFVAGYVHWLTYDGPGSQRE--- 824

Query: 221 ILSFDFGKES 230
           I+S D   ES
Sbjct: 825 IVSLDLEDES 854


>TC81203 weakly similar to GP|10177464|dbj|BAB10855.
           gb|AAD21700.1~gene_id:MQB2.18~similar to unknown protein
           {Arabidopsis thaliana}, partial (9%)
          Length = 715

 Score = 81.6 bits (200), Expect = 4e-16
 Identities = 63/182 (34%), Positives = 86/182 (46%), Gaps = 34/182 (18%)
 Frame = +1

Query: 3   PPQFLPEELRLEILSWLPVKSLVRFRCVSKSWKSIIS-DSQFIKLHLHRSSSTT------ 55
           P   L +EL ++ILS LPVK+L++F+CV KSWK++IS D  F KLHL RS   T      
Sbjct: 187 PTSLLLDELIVDILSRLPVKTLMQFKCVCKSWKTLISHDPSFAKLHLQRSPRNTHLTLVS 366

Query: 56  -RNTDFAYLQSLITSP--------------RKSRSASTIAIPDD-------YDFC---GT 90
            R++D     S++  P                      +AIPDD        D C   G+
Sbjct: 367 DRSSDDESNFSVVPFPVSHLIEAPLTITPFEPYHLLRNVAIPDDPYYVLGNMDCCIIIGS 546

Query: 91  CNGLVCLHSSKYDRKDKYTSHVRLWNPAMRSMSQRSPPLYLPIVYDSYF--GFDYDSSTD 148
           CNGL CL       +++     R WNPA  ++S+    L      + +F   F YD S D
Sbjct: 547 CNGLYCLRCYSLIYEEEEHDWFRFWNPATNTLSEELGCL------NEFFRLTFGYDISND 708

Query: 149 TY 150
           TY
Sbjct: 709 TY 714


>TC82343 similar to GP|10177628|dbj|BAB10775.
           gb|AAF30317.1~gene_id:K6M13.17~similar to unknown
           protein {Arabidopsis thaliana}, partial (9%)
          Length = 666

 Score = 78.6 bits (192), Expect = 4e-15
 Identities = 55/175 (31%), Positives = 86/175 (48%), Gaps = 16/175 (9%)
 Frame = +2

Query: 1   MEPPQFLPEELRLEILSWLPVKSLVRFRCVSKSWKSIISDSQFIKLHLHRSSST------ 54
           ++ P +LP+EL  +IL  LPVKSL+RF+ V KSW S+ISD+ F   H   +++T      
Sbjct: 47  VDAPPYLPDELITKILVRLPVKSLIRFKSVCKSWFSLISDNHFANSHFQVTAATHTLRIL 226

Query: 55  --TRNTDFAYL--QSLITSPRKSRSA--STIAIPD---DYDFCGTCNGLVCLHSSKYDRK 105
             T   +F Y+   SL T              +P+   D +   +C G + +H+      
Sbjct: 227 FLTATPEFRYIAVDSLFTDDYNEPVPLNPNFPLPEFEFDLEIKASCRGFIYVHT------ 388

Query: 106 DKYTSHVRLWNPAMRSMSQ-RSPPLYLPIVYDSYFGFDYDSSTDTYKVVAVAVAL 159
               S   +WNP+   + Q   PP    ++   ++GF YD STD Y VV+V + +
Sbjct: 389 ---CSEAYIWNPSTGFLKQIPFPPNVSNLI---FYGFGYDESTDDYLVVSVYLVI 535


>TC81493 weakly similar to PIR|F86249|F86249 protein F25C20.23 [imported] -
           Arabidopsis thaliana, partial (9%)
          Length = 728

 Score = 77.0 bits (188), Expect = 1e-14
 Identities = 71/250 (28%), Positives = 117/250 (46%), Gaps = 19/250 (7%)
 Frame = +1

Query: 7   LPEELRLEILSWLPVKSLVRFRCVSKSWKSIISDSQFIKLHLHRSSSTT---RNTDFAYL 63
           LP E+  EILS +P K L+R R   K W+++I  + FI LHL +S  +    R     Y 
Sbjct: 16  LPTEVTTEILSRVPAKPLLRLRSTCKWWRNLIDSTDFIFLHLSKSRDSVIILRQHSRLYE 195

Query: 64  QSLITSPR-KSRSASTIAIPDDYDFCGTCNGLVCLHSSKYDRKDKYTSHVRLWNPAMRS- 121
             L +  R K      +   +     G+CNGL+C+ +   D        +  WNP +R  
Sbjct: 196 LDLNSMDRVKELDHPLMCYSNRIKVLGSCNGLLCICNIADD--------IAFWNPTIRKH 351

Query: 122 MSQRSPPL----------YLPIVYDSYFGFDYDSSTDTYKVVAVA--VALSWDTLETMVN 169
               S PL             ++    +GF YDS+TD YK+V+++  V L   + ++ V 
Sbjct: 352 RIIPSEPLIRKETNENNTITTLLAAHVYGFGYDSATDDYKLVSISNFVDLHNRSYDSHVT 531

Query: 170 VYNIGDDTCWRTIPVSHLP-SMYLKDDDAVYVNNTLNRLAILPN-VEDRDRCTILSFDFG 227
           +Y +G D  W  +P+  +P ++       V+V+  L+   ++P  +E   R  I++FD  
Sbjct: 532 IYTMGSDV-W--MPLPGVPYALCCARPMGVFVSGALH--WVVPRALEPDSRDLIVAFDLR 696

Query: 228 KESCAQLPLP 237
            E   ++ LP
Sbjct: 697 FEVFREVALP 726


>CA921015 homologue to SP|Q8Y7G1|DPO3 DNA polymerase III polC-type (EC
           2.7.7.7) (PolIII). {Listeria monocytogenes}, partial
           (0%)
          Length = 824

 Score = 75.1 bits (183), Expect = 4e-14
 Identities = 68/221 (30%), Positives = 102/221 (45%), Gaps = 1/221 (0%)
 Frame = -1

Query: 141 FDYDSSTDTYKVVAVAVALSWDTLETMVNVYNIGDDTCWRTIPVSHLPSMYLKDDDAVYV 200
           F YD   D  +V+ V         +  V+VY +G D  W+ I    +P  Y   ++ V+V
Sbjct: 821 FGYDHFIDNIRVMFVLP-------KNEVSVYTLGTDY-WKRI--EDIP--YNIFEEGVFV 678

Query: 201 NNTLNRLAILPNVEDRDRCTILSFDFGKESCAQLPLPYCPQSRYDFYRTWPTLGVLRDCL 260
           + T+N LA        D   ILS D  KES  Q+ LP    +  D +     LGVLR+CL
Sbjct: 677 SGTVNWLA-------SDDSFILSLDVEKESYQQVLLP---DTENDLW----ILGVLRNCL 540

Query: 261 CICQKDKNMHFVVWQMKEFGLYKSWTLLFNIAGYAYDIPCRFFAMYMSENGDALL-LSKL 319
           CI     N+   VW M E+G  +SWT L+++          +  +Y SE+   LL  +++
Sbjct: 539 CILATS-NLFLDVWIMNEYGNQESWTKLYSVPNMQDHGLEAYTVLYSSEDDQLLLEFNEM 363

Query: 320 AVSQPQAVLYTQKDNKLEVTDVANYIFNCYAMNYIESLVPP 360
              + + V+Y  K   L + +  N         YIESL+ P
Sbjct: 362 RSDKVKLVVYDSKTGTLNIPEFQNNYDQICQNFYIESLISP 240


>CA920710 similar to PIR|S64314|S643 probable membrane protein YGR023w -
           yeast (Saccharomyces cerevisiae), partial (7%)
          Length = 774

 Score = 75.1 bits (183), Expect = 4e-14
 Identities = 43/122 (35%), Positives = 64/122 (52%), Gaps = 13/122 (10%)
 Frame = -2

Query: 251 PTLGVLRDCLCICQKDKNMHFVVWQMKEFGLYKSWTLLFNI-------------AGYAYD 297
           P L VL DCLC         FV+WQMKEFG+ +SWT LF I               Y  +
Sbjct: 761 PYLRVLLDCLCFLHDLGKTEFVIWQMKEFGVRESWTRLFKIPYVDLQMLNLPIDVQYLNE 582

Query: 298 IPCRFFAMYMSENGDALLLSKLAVSQPQAVLYTQKDNKLEVTDVANYIFNCYAMNYIESL 357
            P     +Y+S+NGD ++L+         ++Y ++D +++   ++N I    AM+Y+ESL
Sbjct: 581 YP--MLPLYISKNGDKVILTN--EKDDATIIYNKRDKRVDRARISNEIHWFSAMDYVESL 414

Query: 358 VP 359
           VP
Sbjct: 413 VP 408


>CA917238 weakly similar to PIR|A84538|A845 hypothetical protein At2g16220
           [imported] - Arabidopsis thaliana, partial (6%)
          Length = 603

 Score = 73.2 bits (178), Expect = 1e-13
 Identities = 53/144 (36%), Positives = 72/144 (49%), Gaps = 20/144 (13%)
 Frame = +2

Query: 2   EPPQFLPEELRLEILSWLPVKSLVRFRCVSKSWKSIISDSQFIKLHLHRSSSTTRNTDFA 61
           EPP  LP+EL  E+LS   VKSL+R RCVS+ W S+ISD +F+KLH+ RS+     T  +
Sbjct: 131 EPPSVLPDELITEVLSRGDVKSLMRMRCVSEYWNSMISDPRFVKLHMKRSARNAHLT-LS 307

Query: 62  YLQSLITSP--------RKSRSASTIAIPDDYDF----------CGTCNGLVCLHSSKYD 103
             +S I           R       I +P D  +           G+CNG +CL    + 
Sbjct: 308 LCKSGIDGDNNVVPYPVRGLIENGLITLPSDPYYRLKDKECQYVIGSCNGWLCLLG--FS 481

Query: 104 RKDKYTSHV--RLWNPAMRSMSQR 125
               Y  H+  R WNPAM  M+Q+
Sbjct: 482 SIGAY-RHIWFRFWNPAMGKMTQK 550


>BG646382 
          Length = 603

 Score = 73.2 bits (178), Expect = 1e-13
 Identities = 46/120 (38%), Positives = 62/120 (51%), Gaps = 19/120 (15%)
 Frame = +3

Query: 251 PTLGVLRDCLCICQKDKNMHFVVWQMKEFGLYKSWTLLFNI------------------A 292
           P+L VL DCLC     K   FV+WQMKEFG  +SWT LF I                   
Sbjct: 231 PSLRVLMDCLCFSHDFKRTEFVIWQMKEFGSQESWTQLFRIKYINLQIHNLPINDNLDLL 410

Query: 293 GY-AYDIPCRFFAMYMSENGDALLLSKLAVSQPQAVLYTQKDNKLEVTDVANYIFNCYAM 351
           GY   +IP     +Y+SENGD L+LS     +   ++Y Q+D ++E T ++N I  C A+
Sbjct: 411 GYMECNIP--LLPLYLSENGDTLILSN--DEEEGVIIYNQRDKRVEKTRISNEI--CLAL 572


>TC84657 weakly similar to GP|9294656|dbj|BAB03005.1
           gb|AAF30317.1~gene_id:F14O13.6~similar to unknown
           protein {Arabidopsis thaliana}, partial (14%)
          Length = 884

 Score = 72.0 bits (175), Expect = 3e-13
 Identities = 58/182 (31%), Positives = 85/182 (45%), Gaps = 18/182 (9%)
 Frame = +1

Query: 6   FLPEELRLEILSWLPVKSLVRFRCVSKSWKSIISDSQFIKLHLHRSSSTTRNTDFAYLQS 65
           +LP EL ++I+  LPVKSL+RF+CV KS  ++ISD  F K H   S++T  N    ++ +
Sbjct: 325 YLPHELIIQIMLRLPVKSLIRFKCVCKSLLALISDHNFAKSHFELSTATHTNR-IVFMST 501

Query: 66  LITSPR--------KSRSAST-----IAIPDDY---DFCGTCNGLVCLHSSKYDRKDKYT 109
           L    R           SAST        P+ Y   +   +C G + L  S         
Sbjct: 502 LALETRSIDFEASLNDDSASTSLNLNFMPPESYSSLEIKSSCRGFIVLTCS--------- 654

Query: 110 SHVRLWNPAMRSMSQ-RSPPLYLPIVYD-SYFGFDYDSSTDTYKVVAVAVALSWDTLETM 167
           S++ LWNP+     Q   P   L   Y    +GF YD   D Y VV+V+   S D ++  
Sbjct: 655 SNIYLWNPSTGHHKQIPFPASNLDAKYSCCLYGFGYDHLRDDYLVVSVSYNTSIDPVDDN 834

Query: 168 VN 169
           ++
Sbjct: 835 IS 840


>TC84924 weakly similar to PIR|F96545|F96545 hypothetical protein F8A12.9
           [imported] - Arabidopsis thaliana, partial (9%)
          Length = 575

 Score = 72.0 bits (175), Expect = 3e-13
 Identities = 52/167 (31%), Positives = 76/167 (45%), Gaps = 18/167 (10%)
 Frame = +1

Query: 7   LPEELRLEILSWLPVKSLVRFRCVSKSWKSIISDSQFIKLHLHRS--------------S 52
           LP+EL ++ L  LPVKSL+ F+C+ K W SIISD  F   H   +              S
Sbjct: 61  LPQELIIQFLLRLPVKSLLVFKCICKLWFSIISDPHFANSHFQLNHAKHTRRFLCISALS 240

Query: 53  STTRNTDF-AYLQSLITSPRKSRSASTIAIPDDY---DFCGTCNGLVCLHSSKYDRKDKY 108
              R+ DF A+L     SP  + S     +PD Y   +  G+C G + ++          
Sbjct: 241 PEIRSIDFDAFLNDAPASPNFNCS-----LPDSYFPFEIKGSCRGFIFMYRH-------- 381

Query: 109 TSHVRLWNPAMRSMSQRSPPLYLPIVYDSYFGFDYDSSTDTYKVVAV 155
             ++ +WNP+  S  Q     +    Y + +GF YD S D Y VV +
Sbjct: 382 -PNIYIWNPSTGSKRQILMSAFNTKAYINLYGFGYDQSRDDYVVVFI 519


>TC84199 similar to GP|9294656|dbj|BAB03005.1
           gb|AAF30317.1~gene_id:F14O13.6~similar to unknown
           protein {Arabidopsis thaliana}, partial (14%)
          Length = 673

 Score = 69.7 bits (169), Expect = 2e-12
 Identities = 52/166 (31%), Positives = 73/166 (43%), Gaps = 16/166 (9%)
 Frame = +1

Query: 6   FLPEELRLEILSWLPVKSLVRFRCVSKSWKSIISDSQFIKLHLHRSSSTTRNTDFAY--- 62
           +LP EL ++IL WLPVKSL+RF+CV KSW S+ISD+ F   H   ++  +R   F     
Sbjct: 106 YLPLELIIQILLWLPVKSLLRFKCVCKSWFSLISDTHFANSHFQITAKHSRRVLFMLNHV 285

Query: 63  ---LQSLITSPRKSRSASTIAIP---------DDYDF-CGTCNGLVCLHSSKYDRKDKYT 109
              L     +     + S I  P         D  D    +C G + LH+          
Sbjct: 286 PTTLSLDFEALHCDNAVSEIPNPIPNFVEPPCDSLDTNSSSCRGFIFLHNDP-------- 441

Query: 110 SHVRLWNPAMRSMSQRSPPLYLPIVYDSYFGFDYDSSTDTYKVVAV 155
             + +WNP+ R   Q          +   +GF YD   D Y VV+V
Sbjct: 442 -DLFIWNPSTRVYKQIPLSPNDSNSFHCLYGFGYDQLRDDYLVVSV 576


>TC89815 
          Length = 807

 Score = 68.9 bits (167), Expect = 3e-12
 Identities = 58/197 (29%), Positives = 90/197 (45%), Gaps = 16/197 (8%)
 Frame = +1

Query: 3   PPQFLPEELRLEILSWLPVKSLVRFRCVSKSWKSIISDSQFIKLHLHRSSS----TTRNT 58
           P   +P E+ ++ILS LP   L+RFR  SKS KSII    F  LHL  S++       N 
Sbjct: 34  PMANIPPEIFIDILSLLPPHPLLRFRSTSKSLKSIIDSHTFTNLHLKNSNNFYLIIRHNA 213

Query: 59  DFAYLQSLITSPRKSRSASTIAIPDDYDFCGTCNGLVCLHSSKYDRKDKYTSHVRLWNPA 118
           +   L     +P    +   ++  +     G+CNGL+C+ +   D        +  WNP 
Sbjct: 214 NLYQLDFPNLTPPIPLNHPLMSYSNRITLFGSCNGLICISNIADD--------IAFWNPN 369

Query: 119 MRSMSQRSPPLYLPIVYDS----------YFGFDYDSSTDTYKVVAVA--VALSWDTLET 166
           +R    R  P YLP    S            GF YDS    YK+V ++  V L   + ++
Sbjct: 370 IR--KHRIIP-YLPTTPRSESDTTLFAARVHGFGYDSFAGDYKLVRISYFVDLQNRSFDS 540

Query: 167 MVNVYNIGDDTCWRTIP 183
            V V+++  ++ W+ +P
Sbjct: 541 QVRVFSLKMNS-WKELP 588


>BF632054 similar to GP|10177628|dbj gb|AAF30317.1~gene_id:K6M13.17~similar
           to unknown protein {Arabidopsis thaliana}, partial (8%)
          Length = 462

 Score = 67.8 bits (164), Expect = 6e-12
 Identities = 39/67 (58%), Positives = 44/67 (65%)
 Frame = +3

Query: 3   PPQFLPEELRLEILSWLPVKSLVRFRCVSKSWKSIISDSQFIKLHLHRSSSTTRNTDFAY 62
           P  FLPEEL LEIL  LP+KSL+RFRCV KSW  IIS+  FIK  LH S   T+NT F  
Sbjct: 132 PLPFLPEELILEILIKLPIKSLLRFRCVCKSWLHIISNPYFIKKQLHFS---TQNTHFTT 302

Query: 63  LQSLITS 69
              +I S
Sbjct: 303 NHRIILS 323


>TC91177 similar to GP|9294656|dbj|BAB03005.1
           gb|AAF30317.1~gene_id:F14O13.6~similar to unknown
           protein {Arabidopsis thaliana}, partial (9%)
          Length = 1298

 Score = 56.6 bits (135), Expect(2) = 6e-11
 Identities = 75/329 (22%), Positives = 133/329 (39%), Gaps = 43/329 (13%)
 Frame = +2

Query: 27  FRCVSKSWKSIISDSQFIKLHLHRSSSTTRNTDFA---YLQSLITSPRKSRS-------- 75
           F+CV K W S+IS   F   H   +++T  N       YLQSL      S +        
Sbjct: 74  FKCVCKLWLSLISQPHFANSHFQLTTATHTNRIMLITPYLQSLSIDLELSLNDDSAVYTT 253

Query: 76  -ASTIAIPDDY--------------------DFCGTCNGLVCLHSSKYDRKDKYTSHVRL 114
             S +   +DY                    DF G+C G + L+           S + +
Sbjct: 254 DISFLIDDEDYYSSSSSDMDDLSPPKSFFILDFKGSCRGFILLNCY---------SSLCI 406

Query: 115 WNPAMRSMSQRSPPLYLPIVYDS--YFGFDYDSSTDTYKVVAVAV--ALSWDTLETMVNV 170
           WNP+     +R P   +    D+  ++GF YD STD Y V++++   + S D + + + +
Sbjct: 407 WNPST-GFHKRIPFTTIDSNPDANYFYGFGYDESTDDYLVISMSYEPSPSSDGMLSHLGI 583

Query: 171 YNIGDDTCWRTIPVSHLPSMYLKDDDAVYVNNTLNRLAI--LPNVEDRDRCTILSFDFGK 228
           +++  +  W  +   +L  +    +  + +  +L+  AI  L    D     I++F   +
Sbjct: 584 FSLRANV-WTRVEGGNL--LLYSQNSLLNLVESLSNGAIHWLAFRNDISMPVIVAFHLME 754

Query: 229 ESCAQLPLP----YCPQSRYDFYRTWPTLGVLRDCLCICQ-KDKNMHFVVWQMKEFGLYK 283
               +L LP      P   YD       L V R CL +       + F +W M+++ +  
Sbjct: 755 RKLLELRLPNEIINGPSRAYD-------LWVYRGCLALWHILPDRVTFQIWVMEKYNVQS 913

Query: 284 SWTLLFNIAGYAYDIPCRFFAMYMSENGD 312
           SWT    +  +  +    F+  Y +++GD
Sbjct: 914 SWTKTL-VLSFDGNPAHSFWPKYYTKSGD 997



 Score = 27.7 bits (60), Expect(2) = 6e-11
 Identities = 13/21 (61%), Positives = 17/21 (80%)
 Frame = +3

Query: 6  FLPEELRLEILSWLPVKSLVR 26
          +LP EL ++IL  LPVKSL+R
Sbjct: 12 YLPFELIIQILLRLPVKSLIR 74


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.323    0.137    0.438 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,260,300
Number of Sequences: 36976
Number of extensions: 234492
Number of successful extensions: 1372
Number of sequences better than 10.0: 139
Number of HSP's better than 10.0 without gapping: 1306
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1322
length of query: 361
length of database: 9,014,727
effective HSP length: 97
effective length of query: 264
effective length of database: 5,428,055
effective search space: 1433006520
effective search space used: 1433006520
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 59 (27.3 bits)


Lotus: description of TM0135.3