TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0135.12
         (76 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC76435 homologue to GP|13359451|dbj|BAB33421. putative senescen...   116  1e-27
BG586285 homologue to GP|13359451|db putative senescence-associa...   111  6e-26
TC76492 similar to GP|13359451|dbj|BAB33421. putative senescence...    84  8e-18
TC76409 similar to GP|13359451|dbj|BAB33421. putative senescence...    79  4e-16
TC76411 weakly similar to GP|13359451|dbj|BAB33421. putative sen...    67  1e-12
TC76327 similar to GP|13359451|dbj|BAB33421. putative senescence...    52  3e-08
TC84517                                                                27  1.1
TC90689 similar to GP|4099092|gb|AAD09232.1| unknown {Arabidopsi...    27  1.5
TC81004 weakly similar to SP|Q39529|LEC2_CLALU Agglutinin II pre...    26  2.5
TC91448 weakly similar to PIR|C86432|C86432 protein T5I8.13 [imp...    26  3.3
TC76889 weakly similar to PIR|F81516|F81516 hypothetical protein...    25  4.2
AL376044 similar to GP|18656155|db ryanodine receptor {Hemicentr...    24  9.5
AW981191                                                               24  9.5
TC88075 homologue to GP|2346978|dbj|BAA21923.1 ZPT2-14 {Petunia ...    24  9.5
TC93717 similar to GP|7262671|gb|AAF43929.1| EST gb|AI997595 com...    24  9.5

>TC76435 homologue to GP|13359451|dbj|BAB33421. putative
           senescence-associated protein {Pisum sativum}, complete
          Length = 1389

 Score =  116 bits (291), Expect = 1e-27
 Identities = 56/71 (78%), Positives = 59/71 (82%), Gaps = 2/71 (2%)
 Frame = +1

Query: 8   SPNSELEALSHNPTHGSFAPLTSQTSVMTNCANQRFLFN*VE--LRHFHQ*GKTNMSHDG 65
           SP+S+LEA SHNPTHGSFAPL  Q S MTNCANQRFL  *VE  LRH HQ*GKTN+SHDG
Sbjct: 391 SPDSDLEAFSHNPTHGSFAPLAFQPSAMTNCANQRFLSY*VELLLRHCHQ*GKTNLSHDG 570

Query: 66  LIPTHVPYWWV 76
           L P HVPYWWV
Sbjct: 571 LNPAHVPYWWV 603


>BG586285 homologue to GP|13359451|db putative senescence-associated protein
           {Pisum sativum}, partial (45%)
          Length = 704

 Score =  111 bits (277), Expect = 6e-26
 Identities = 54/71 (76%), Positives = 57/71 (80%), Gaps = 2/71 (2%)
 Frame = +3

Query: 8   SPNSELEALSHNPTHGSFAPLTSQTSVMTNCANQRFLFN*VE--LRHFHQ*GKTNMSHDG 65
           SP+S+LEA SHNP HGSFAPL  Q S MTNCANQRFL  *VE  LR  HQ*GKTN+SHDG
Sbjct: 297 SPDSDLEAFSHNPAHGSFAPLAFQPSAMTNCANQRFLSY*VELLLRRGHQ*GKTNLSHDG 476

Query: 66  LIPTHVPYWWV 76
           L P HVPYWWV
Sbjct: 477 LNPAHVPYWWV 509


>TC76492 similar to GP|13359451|dbj|BAB33421. putative senescence-associated
           protein {Pisum sativum}, partial (35%)
          Length = 829

 Score = 84.3 bits (207), Expect = 8e-18
 Identities = 43/77 (55%), Positives = 51/77 (65%), Gaps = 2/77 (2%)
 Frame = +1

Query: 2   EYTHRYSPNSELEALSHNPTHGSFAPLTSQTSVMTNCANQRFLFN*VEL--RHFHQ*GKT 59
           E + R   +S+LEA SH P  GS A L  +T+  TN  N+RFL  * +L  R  HQ*GKT
Sbjct: 115 EVSSRSGMDSDLEAFSHYPADGSVAALPGRTAARTNYLNERFLSY*AQLPLRRGHQ*GKT 294

Query: 60  NMSHDGLIPTHVPYWWV 76
           N+SHDGL P HVPYWWV
Sbjct: 295 NLSHDGLNPAHVPYWWV 345


>TC76409 similar to GP|13359451|dbj|BAB33421. putative senescence-associated
           protein {Pisum sativum}, partial (40%)
          Length = 614

 Score = 78.6 bits (192), Expect = 4e-16
 Identities = 42/77 (54%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
 Frame = -3

Query: 2   EYTHRYSPNSELEALSHNPTHGSFAPLTSQTSVMTNCANQRFLFN*VEL--RHFHQ*GKT 59
           E + R   +S+LEA SH P  GS A L  +T+  TN  N+RFL  * +L  R  HQ*GKT
Sbjct: 402 EVSSRSGMDSDLEAFSHYPADGSVAALPGRTAARTNYLNERFLSY*AQLPLRRGHQ*GKT 223

Query: 60  NMSHDGLIPTHVPYWWV 76
           N+SHDGL P HVPY WV
Sbjct: 222 NLSHDGLNPAHVPY*WV 172


>TC76411 weakly similar to GP|13359451|dbj|BAB33421. putative
           senescence-associated protein {Pisum sativum}, partial
           (22%)
          Length = 592

 Score = 67.4 bits (163), Expect = 1e-12
 Identities = 37/71 (52%), Positives = 45/71 (63%), Gaps = 2/71 (2%)
 Frame = +2

Query: 2   EYTHRYSPNSELEALSHNPTHGSFAPLTSQTSVMTNCANQRFLFN*VE--LRHFHQ*GKT 59
           E + R   +S+LEA SH P  GS A L  +T+  TN  N+RFL  * +  LR  HQ*GKT
Sbjct: 380 EVSSRSGMDSDLEAFSHYPADGSVAALPGRTAARTNYLNERFLSY*AQLPLRRGHQ*GKT 559

Query: 60  NMSHDGLIPTH 70
           N+SHDGL P H
Sbjct: 560 NLSHDGLNPAH 592


>TC76327 similar to GP|13359451|dbj|BAB33421. putative
          senescence-associated protein {Pisum sativum}, partial
          (64%)
          Length = 868

 Score = 52.4 bits (124), Expect = 3e-08
 Identities = 30/51 (58%), Positives = 34/51 (65%), Gaps = 1/51 (1%)
 Frame = +2

Query: 1  NEYTHRY-SPNSELEALSHNPTHGSFAPLTSQTSVMTNCANQRFLFN*VEL 50
          N+  HR+ S +S LEA SHNPT GSFA L  Q +  TN  NQRFL  *VEL
Sbjct: 5  NKSHHRFFSMDSGLEAFSHNPTDGSFASLAFQLNAFTNYLNQRFLSY*VEL 157



 Score = 47.0 bits (110), Expect = 1e-06
 Identities = 23/48 (47%), Positives = 31/48 (63%)
 Frame = +3

Query: 29  TSQTSVMTNCANQRFLFN*VELRHFHQ*GKTNMSHDGLIPTHVPYWWV 76
           +S+T +   C ++  +F+       HQ*GKTN+SHDGL P HVPY WV
Sbjct: 135 SSRTELNYYCDDKMKIFS------IHQ*GKTNLSHDGLNPAHVPY*WV 260


>TC84517 
          Length = 455

 Score = 27.3 bits (59), Expect = 1.1
 Identities = 15/37 (40%), Positives = 18/37 (48%)
 Frame = +1

Query: 1   NEYTHRYSPNSELEALSHNPTHGSFAPLTSQTSVMTN 37
           N +     PNS   +LSH P H    P T+QT   TN
Sbjct: 310 NHFARVKVPNSSNPSLSHRPMH---LPKTTQTCSCTN 411


>TC90689 similar to GP|4099092|gb|AAD09232.1| unknown {Arabidopsis
           thaliana}, partial (46%)
          Length = 830

 Score = 26.9 bits (58), Expect = 1.5
 Identities = 15/35 (42%), Positives = 19/35 (53%)
 Frame = +1

Query: 5   HRYSPNSELEALSHNPTHGSFAPLTSQTSVMTNCA 39
           HR SP+S L  L H P+  S   LTS  +V  + A
Sbjct: 223 HRLSPSSTLTQLIHPPSALSAHKLTSSLTVSAHSA 327


>TC81004 weakly similar to SP|Q39529|LEC2_CLALU Agglutinin II precursor
           (ClAII) (LecClAII). [Yellow wood] {Cladrastis lutea},
           partial (24%)
          Length = 610

 Score = 26.2 bits (56), Expect = 2.5
 Identities = 16/46 (34%), Positives = 23/46 (49%), Gaps = 1/46 (2%)
 Frame = -2

Query: 32  TSVMTNCANQRFLFN*VELRHFHQ*GKTNMSHDGL-IPTHVPYWWV 76
           T ++TNC+N R    *+ L   +         DG+ I TH+  WWV
Sbjct: 378 TIIITNCSNHR*---*IALNTINSPSLRCFGTDGICINTHMRIWWV 250


>TC91448 weakly similar to PIR|C86432|C86432 protein T5I8.13 [imported] -
          Arabidopsis thaliana, partial (8%)
          Length = 682

 Score = 25.8 bits (55), Expect = 3.3
 Identities = 10/29 (34%), Positives = 16/29 (54%)
 Frame = +1

Query: 17 SHNPTHGSFAPLTSQTSVMTNCANQRFLF 45
          SH P HG+   +T +T  + +  N RF +
Sbjct: 4  SHAPFHGTLFTVTPKTKTLHSSQNMRFRY 90


>TC76889 weakly similar to PIR|F81516|F81516 hypothetical protein CP0987
           [imported] - Chlamydophila pneumoniae (strain AR39),
           partial (62%)
          Length = 2758

 Score = 25.4 bits (54), Expect = 4.2
 Identities = 10/14 (71%), Positives = 11/14 (78%)
 Frame = +2

Query: 59  TNMSHDGLIPTHVP 72
           T +SHD L PTHVP
Sbjct: 254 TELSHDVLNPTHVP 295


>AL376044 similar to GP|18656155|db ryanodine receptor {Hemicentrotus
           pulcherrimus}, partial (0%)
          Length = 525

 Score = 24.3 bits (51), Expect = 9.5
 Identities = 9/17 (52%), Positives = 10/17 (57%)
 Frame = +1

Query: 54  HQ*GKTNMSHDGLIPTH 70
           HQ GK N  H G +P H
Sbjct: 379 HQGGKPNFQHKGGLPNH 429


>AW981191 
          Length = 656

 Score = 24.3 bits (51), Expect = 9.5
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +3

Query: 9   PNSELEALSHNPTHGSFAPLTSQTSV 34
           P+  L+ + H+P+  SFA LT    V
Sbjct: 549 PSVALQKMQHHPSSSSFADLTDSEIV 626


>TC88075 homologue to GP|2346978|dbj|BAA21923.1 ZPT2-14 {Petunia x
          hybrida}, partial (38%)
          Length = 674

 Score = 24.3 bits (51), Expect = 9.5
 Identities = 9/17 (52%), Positives = 12/17 (69%)
 Frame = +2

Query: 5  HRYSPNSELEALSHNPT 21
          HR+S NS +   S+NPT
Sbjct: 68 HRFSNNSNVTIFSYNPT 118


>TC93717 similar to GP|7262671|gb|AAF43929.1| EST gb|AI997595 comes from
           this gene. {Arabidopsis thaliana}, partial (51%)
          Length = 699

 Score = 24.3 bits (51), Expect = 9.5
 Identities = 9/17 (52%), Positives = 12/17 (69%)
 Frame = -1

Query: 17  SHNPTHGSFAPLTSQTS 33
           +H P+HG F  +TSQ S
Sbjct: 477 NHRPSHGWFYKMTSQAS 427


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.332    0.139    0.486 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,004,907
Number of Sequences: 36976
Number of extensions: 38419
Number of successful extensions: 292
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 286
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 287
length of query: 76
length of database: 9,014,727
effective HSP length: 52
effective length of query: 24
effective length of database: 7,091,975
effective search space: 170207400
effective search space used: 170207400
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.5 bits)
S2: 51 (24.3 bits)