BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0125.11
(904 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ499220 similar to SP|Q09863|YAF Hypothetical protein C29E6.10c... 41 0.002
TC81629 similar to GP|15081654|gb|AAK82482.1 AT4g26750/F10M23_90... 40 0.003
TC78495 homologue to PIR|S53504|S53504 extensin-like protein S3 ... 38 0.020
TC81530 similar to GP|10177440|dbj|BAB10736. gb|AAC55944.1~gene_... 38 0.020
TC81816 similar to GP|8096269|dbj|BAA95789.1 KED {Nicotiana taba... 37 0.026
TC92661 similar to GP|22093674|dbj|BAC06968. kinase-like protein... 36 0.058
TC87088 similar to PIR|F86399|F86399 protein F17L21.22 [imported... 36 0.058
TC88762 similar to GP|22136928|gb|AAM91808.1 unknown protein {Ar... 36 0.058
BG647388 weakly similar to GP|22136652|gb| unknown protein {Arab... 35 0.099
BG647087 weakly similar to GP|22136652|gb unknown protein {Arabi... 35 0.099
TC79294 similar to GP|23237931|dbj|BAC16504. contains ESTs C2607... 35 0.13
TC83149 similar to GP|13561982|gb|AAK30594.1 flagelliform silk p... 35 0.13
TC86038 similar to GP|21618251|gb|AAM67301.1 unknown {Arabidopsi... 34 0.22
AW980681 similar to GP|23237931|dbj contains ESTs C26074(C11585)... 34 0.22
TC80411 weakly similar to PIR|T47635|T47635 probable protein - A... 34 0.22
TC78703 homologue to GP|13129456|gb|AAK13114.1 Putative retroele... 34 0.22
TC77435 similar to GP|7211427|gb|AAF40306.1| RNA helicase {Vigna... 34 0.29
TC89754 similar to GP|21618273|gb|AAM67323.1 unknown {Arabidopsi... 34 0.29
TC76827 similar to GP|17154773|gb|AAL35979.1 extensin-like prote... 34 0.29
BQ140567 weakly similar to PIR|T49477|T494 phenol hydroxylase re... 33 0.49
>AJ499220 similar to SP|Q09863|YAF Hypothetical protein C29E6.10c in
chromosome I. [Fission yeast] {Schizosaccharomyces
pombe}, partial (12%)
Length = 518
Score = 40.8 bits (94), Expect = 0.002
Identities = 25/75 (33%), Positives = 45/75 (59%), Gaps = 1/75 (1%)
Frame = -3
Query: 765 LTAERD-QRIKAAKQRFARRVALHEQQQRHKLLEAAEEARRKQEQAEEAARQAAAQAEQA 823
L ER+ +++K +++ A+ AL +Q++ + AE R +E+A+ A R+ + E+
Sbjct: 234 LKEERELKKLKEKERKKAKNRALKQQKEEERARREAE--RLAEEKAQRAEREKKLEEERK 61
Query: 824 RLEAERLEAEAEARR 838
R E ERL+ EAE R+
Sbjct: 60 RREEERLKKEAERRQ 16
>TC81629 similar to GP|15081654|gb|AAK82482.1 AT4g26750/F10M23_90
{Arabidopsis thaliana}, partial (19%)
Length = 824
Score = 40.4 bits (93), Expect = 0.003
Identities = 32/119 (26%), Positives = 52/119 (42%)
Frame = +2
Query: 585 EEYYLTCPSPRRYPGPRPERLVDPDEPILANPLHEADPLAQQAQPDPVQQEPVQPDPEQS 644
+EY+ PS +P P + D P + + P +Q QP P Q+ QP P +S
Sbjct: 29 QEYHPPPPSQDYHPPPPSQ-----DYPPPPSQDYHPPPPSQDYQPPPPSQDYHQPPPARS 193
Query: 645 VSNHSSVRSPNPLVDTSEPHLGASEPHVQTCDIGSPQGTSEAHSSNHPTSPETNLSIVP 703
S++S + +LG + P +T P S H ++P+ E++L VP
Sbjct: 194 DSSYSEPYNHQQYSPDQSQNLGPNYPSHET-----PPPYSLPHFQSYPSFTESSLPSVP 355
>TC78495 homologue to PIR|S53504|S53504 extensin-like protein S3 - alfalfa,
partial (97%)
Length = 1049
Score = 37.7 bits (86), Expect = 0.020
Identities = 40/125 (32%), Positives = 49/125 (39%), Gaps = 4/125 (3%)
Frame = +3
Query: 593 SPRRYPGP-RPERLVDPDEPILANPLHEADPLAQQAQPDPVQQEPVQPDPEQSVSNHSSV 651
SP P P P P P + P ++ P Q+ P P+Q P P QS V
Sbjct: 252 SPNSSPAPPTPPANTPPTTPQASPPPVQSSPPPVQSSPPPLQS---SPPPAQSTP--PPV 416
Query: 652 RSPNPLVDTSEPHLGASEPHVQ-TCDIGSPQGTSEAHSSNHPTS--PETNLSIVPYTSLR 708
+S P V S P + P VQ T SP S S P + P T P +L
Sbjct: 417 QSSPPPVQQSPPPTPLTPPPVQSTPPPASPPPASPPPFSPPPATPPPATPPPATPPPALT 596
Query: 709 PTSLS 713
PT LS
Sbjct: 597 PTPLS 611
Score = 32.0 bits (71), Expect = 1.1
Identities = 24/83 (28%), Positives = 31/83 (36%)
Frame = +3
Query: 440 STNPLTLIPESQPAAQTTSQPNSLRSSFFQPSPNEAPLWNMLQNQPTGPSDPTSPITIQY 499
+ P T S P Q++ P Q SP A Q T P +SP +Q
Sbjct: 288 ANTPPTTPQASPPPVQSSPPPVQSSPPPLQSSPPPA--------QSTPPPVQSSPPPVQQ 443
Query: 500 NPESEPLTLEPELTIPVQTEPEP 522
+P PLT P + P P P
Sbjct: 444 SPPPTPLTPPPVQSTPPPASPPP 512
>TC81530 similar to GP|10177440|dbj|BAB10736.
gb|AAC55944.1~gene_id:K9H21.2~similar to unknown protein
{Arabidopsis thaliana}, partial (24%)
Length = 1135
Score = 37.7 bits (86), Expect = 0.020
Identities = 22/55 (40%), Positives = 29/55 (52%)
Frame = +1
Query: 768 ERDQRIKAAKQRFARRVALHEQQQRHKLLEAAEEARRKQEQAEEAARQAAAQAEQ 822
E ++R K K R E+ +R EAA EA+RK+E EAARQA E+
Sbjct: 454 ELERRQKEEKARLQAEAKAAEEARRKAEAEAAAEAKRKRELEREAARQALQNMEK 618
>TC81816 similar to GP|8096269|dbj|BAA95789.1 KED {Nicotiana tabacum},
partial (13%)
Length = 663
Score = 37.4 bits (85), Expect = 0.026
Identities = 21/82 (25%), Positives = 38/82 (45%), Gaps = 1/82 (1%)
Frame = +3
Query: 300 KKMGLVQKKIAPAHED-TSSKIRQRRRKMVLEESSEESDVPLTKKKKADQPKRKHDETSK 358
KK ++ + ED K +++++K E+ E+ D +KK ++K D+
Sbjct: 261 KKKEKKEENVKGEEEDGDEKKDKEKKKKEKKEKGKEDKDKDGEEKKSKKDKEKKKDKNED 440
Query: 359 PDDGNDGDNDGGPSPPKKKKKQ 380
D+G DG K+KKK+
Sbjct: 441 DDEGEDGSKKKKNKDKKEKKKE 506
Score = 31.2 bits (69), Expect = 1.9
Identities = 16/65 (24%), Positives = 31/65 (47%)
Frame = +3
Query: 314 EDTSSKIRQRRRKMVLEESSEESDVPLTKKKKADQPKRKHDETSKPDDGNDGDNDGGPSP 373
E K +++++K EE+ + + +KK ++ K++ E K D DG+
Sbjct: 231 EGKDKKDKEKKKKEKKEENVKGEEEDGDEKKDKEKKKKEKKEKGKEDKDKDGEEKKSKKD 410
Query: 374 PKKKK 378
+KKK
Sbjct: 411 KEKKK 425
>TC92661 similar to GP|22093674|dbj|BAC06968. kinase-like protein {Oryza
sativa (japonica cultivar-group)}, partial (13%)
Length = 702
Score = 36.2 bits (82), Expect = 0.058
Identities = 31/105 (29%), Positives = 51/105 (48%)
Frame = +2
Query: 736 LSENAESVAEKWNSLSTWLVAQVPVMMQHLTAERDQRIKAAKQRFARRVALHEQQQRHKL 795
L+ +A SV E WN+ PV+ L+ +R R + RFA + + Q++ L
Sbjct: 368 LATDASSV-EVWNT---------PVLPVQLSPKRALRYAMLRSRFAGTIL---KAQQNTL 508
Query: 796 LEAAEEARRKQEQAEEAARQAAAQAEQARLEAERLEAEAEARRLA 840
L+ ++ + Q E+ + + EQAR+EA+ AEA R A
Sbjct: 509 LKHGDKGDPMKMQLEKERLERIQREEQARIEAQIKAAEAAERTRA 643
>TC87088 similar to PIR|F86399|F86399 protein F17L21.22 [imported] -
Arabidopsis thaliana, partial (4%)
Length = 2997
Score = 36.2 bits (82), Expect = 0.058
Identities = 31/124 (25%), Positives = 56/124 (45%), Gaps = 6/124 (4%)
Frame = +3
Query: 774 KAAKQRFARRVALHEQQQRHKLLEAAEEARRKQEQAEEAARQAAAQAEQARLEAERLEAE 833
K K+R ++ A QQQ+ + L+ + R +Q+QAE +Q A + +Q + A
Sbjct: 354 KLQKERLQQQQAERLQQQQAERLQQQQAERLQQQQAERLQQQQAERLQQQTNISSHFPAY 533
Query: 834 AEARRLAPVV-FTPAASASTPAHQAAQNVPSN-----STPPSSSRLELMEQRLDTHESML 887
L F+P+ S + Q QN ++ +LE+ +Q + H+ +L
Sbjct: 534 LNGSDLDRFPGFSPSQSNKSGIQQMMQNPGTDFERLFELQAQQRQLEIQQQDMH-HQQLL 710
Query: 888 QDMK 891
Q +K
Sbjct: 711 QQLK 722
>TC88762 similar to GP|22136928|gb|AAM91808.1 unknown protein {Arabidopsis
thaliana}, partial (3%)
Length = 805
Score = 36.2 bits (82), Expect = 0.058
Identities = 37/131 (28%), Positives = 50/131 (37%)
Frame = +3
Query: 434 SAMLKRSTNPLTLIPESQPAAQTTSQPNSLRSSFFQPSPNEAPLWNMLQNQPTGPSDPTS 493
S+ + +T+P P S P + TTS P S +S P+ P PT S P S
Sbjct: 114 SSPVSTTTSPPASTPASSPVSTTTSPPASTPASSPVPTTTSPP-------APTPASSPVS 272
Query: 494 PITIQYNPESEPLTLEPELTIPVQTEPEPRMSDHSVPRASERLVSRTTDTDSSSVYTPIS 553
+ T P ++P P P + P S S T SS+ TP
Sbjct: 273 ---------TNSPTASPAGSLPAAATPSPSSTTAGSPSPS----STPPGTRSSNETTP-G 410
Query: 554 FPTNVADSSPS 564
VA +SPS
Sbjct: 411 RSIGVASASPS 443
Score = 30.8 bits (68), Expect = 2.4
Identities = 27/102 (26%), Positives = 38/102 (36%)
Frame = +3
Query: 432 PISAMLKRSTNPLTLIPESQPAAQTTSQPNSLRSSFFQPSPNEAPLWNMLQNQPTGPSDP 491
P S+ + +T+P P S P TTS P P+P +P + N PT
Sbjct: 156 PASSPVSTTTSPPASTPASSPVPTTTSPP--------APTPASSP---VSTNSPTASPAG 302
Query: 492 TSPITIQYNPESEPLTLEPELTIPVQTEPEPRMSDHSVPRAS 533
+ P +P S P T P R S+ + P S
Sbjct: 303 SLPAAATPSPSSTTAGSPS----PSSTPPGTRSSNETTPGRS 416
>BG647388 weakly similar to GP|22136652|gb| unknown protein {Arabidopsis
thaliana}, partial (26%)
Length = 844
Score = 35.4 bits (80), Expect = 0.099
Identities = 46/189 (24%), Positives = 78/189 (40%), Gaps = 17/189 (8%)
Frame = +3
Query: 682 GTSEAHSSNHPTSPETNLSIVPYTSLRPTSLSECINVF--------NREASLML------ 727
GT+ TSP +++ + SL+P S+ I++ N L L
Sbjct: 303 GTNSRKRVREGTSP----NVINHFSLQPPQPSQIIHLSQLHNHQQQNVSTGLRLSFDDQQ 470
Query: 728 -RNVQGQTDLSENAESVAEKWNSLSTWLVAQVPVMMQHLTAERDQRIKAAKQRFARRVAL 786
+ +Q Q L + + +S S+ L + ++ E DQ ++ + R +A
Sbjct: 471 QQRLQLQLQLQLHQQQQGCHSSSFSSLLPQGLVSQIKQQHDELDQYLQTQGENLRRTLAD 650
Query: 787 HEQQQRHKLLEAAEEA--RRKQEQAEEAARQAAAQAEQARLEAERLEAEAEARRLAPVVF 844
Q+ +LL AAEEA RR +E+ E A+ A R AE EAR +
Sbjct: 651 KRQKHYRELLNAAEEAVARRLREKEVEFAK------------ATRTNAELEARTAQLTME 794
Query: 845 TPAASASTP 853
+P+ + +P
Sbjct: 795 SPSMAGKSP 821
>BG647087 weakly similar to GP|22136652|gb unknown protein {Arabidopsis
thaliana}, partial (36%)
Length = 718
Score = 35.4 bits (80), Expect = 0.099
Identities = 45/179 (25%), Positives = 74/179 (41%), Gaps = 17/179 (9%)
Frame = +1
Query: 697 TNLSIVPYTSLRPTSLSECINVF--------NREASLML-------RNVQGQTDLSENAE 741
T+ +++ + SL+P S+ I++ N L L + +Q Q L + +
Sbjct: 175 TSPNVINHFSLQPPQPSQIIHLSQLHNHQQQNVSTGLRLSFDDQQQQRLQLQLQLQLHQQ 354
Query: 742 SVAEKWNSLSTWLVAQVPVMMQHLTAERDQRIKAAKQRFARRVALHEQQQRHKLLEAAEE 801
+S S+ L + ++ E DQ ++ + R +A Q+ +LL AAEE
Sbjct: 355 QQGCHSSSFSSLLPQGLVSQIKQQHDELDQYLQTQGENLRRTLADKRQKHYRELLNAAEE 534
Query: 802 A--RRKQEQAEEAARQAAAQAEQARLEAERLEAEAEARRLAPVVFTPAASASTPAHQAA 858
A RR +E+ E A+ A R AE EAR + A PA +AA
Sbjct: 535 AVARRLREKEVEFAK------------ATRRNAELEARTAQLTMEAQVWQAKAPAQEAA 675
>TC79294 similar to GP|23237931|dbj|BAC16504. contains ESTs C26074(C11585)
AU092275(C11585)~unknown protein, partial (11%)
Length = 750
Score = 35.0 bits (79), Expect = 0.13
Identities = 32/126 (25%), Positives = 46/126 (36%), Gaps = 16/126 (12%)
Frame = +1
Query: 510 PELTIPVQTEPEPR------------MSDHSVPRASERLVSRTTDTDSSSVYTPISFPTN 557
P + P+ EPE + D + E T T S V T I
Sbjct: 349 PRVVNPMVKEPETAQLTMFYNGQVIVLDDFPAEKVEELKSFARTQTQHSDVPTMIPQQPP 528
Query: 558 VADSSPSNNSESIRKFMEVRKEKVSTLEEYYLTCP---SPRRYPGPRPERLVDPDEP-IL 613
P S+R+FME RK++VS Y CP +P ++ P ++ IL
Sbjct: 529 SLIDMPIARKASLRRFMEKRKDRVSVYSPYQRICPDSAAPEKHAESAPWLVLGAKST*IL 708
Query: 614 ANPLHE 619
N + E
Sbjct: 709 VNSIRE 726
>TC83149 similar to GP|13561982|gb|AAK30594.1 flagelliform silk protein
{Argiope trifasciata}, partial (3%)
Length = 1177
Score = 35.0 bits (79), Expect = 0.13
Identities = 46/190 (24%), Positives = 63/190 (32%), Gaps = 2/190 (1%)
Frame = +3
Query: 471 SPNEAPLWNMLQNQPTGPSDPT--SPITIQYNPESEPLTLEPELTIPVQTEPEPRMSDHS 528
SP+ A + PT PS PT +P T + S + P P+ P P
Sbjct: 24 SPSYASRTPLRSTPPTRPSSPTPSAPRTSSRSTPSTSPSRRPRSKTPLPPPPPPLPQHPK 203
Query: 529 VPRASERLVSRTTDTDSSSVYTPISFPTNVADSSPSNNSESIRKFMEVRKEKVSTLEEYY 588
P+ S + R+ + SS TP+ SPS S ST
Sbjct: 204 PPQKSPPRMRRSKPSPSSPAATPLWPQRTTPPPSPSTPRPS-----P*TPATPSTSPTAP 368
Query: 589 LTCPSPRRYPGPRPERLVDPDEPILANPLHEADPLAQQAQPDPVQQEPVQPDPEQSVSNH 648
L P PR P + P P + P +P PV P P Q V
Sbjct: 369 LPTPPPRTTLPP----ALTPRPPSPSTP--------PTPKPGPVSVSPASPSATQRVPWR 512
Query: 649 SSVRSPNPLV 658
+ R+ + V
Sbjct: 513 PTARASSTKV 542
>TC86038 similar to GP|21618251|gb|AAM67301.1 unknown {Arabidopsis
thaliana}, partial (22%)
Length = 1554
Score = 34.3 bits (77), Expect = 0.22
Identities = 27/99 (27%), Positives = 42/99 (42%), Gaps = 10/99 (10%)
Frame = +2
Query: 501 PESEPLTLEP------ELTIPVQTEPEPRMSDHSVPRASERLVSR--TTDTDSSSVYTP- 551
P S P+ + P L++ T P+P S SR T T + V TP
Sbjct: 824 PISPPVYIPPCSGISSPLSVSSHTGPQPGSGSSSSDEFMAAKTSRGPTPTTSACKVVTPK 1003
Query: 552 -ISFPTNVADSSPSNNSESIRKFMEVRKEKVSTLEEYYL 589
++ T + + P S+ +F+E RKE+V + Y L
Sbjct: 1004VVNATTMIPSAIPQARKASLARFLEKRKERVMSTAPYNL 1120
>AW980681 similar to GP|23237931|dbj contains ESTs C26074(C11585)
AU092275(C11585)~unknown protein, partial (11%)
Length = 748
Score = 34.3 bits (77), Expect = 0.22
Identities = 27/100 (27%), Positives = 39/100 (39%), Gaps = 4/100 (4%)
Frame = +1
Query: 524 MSDHSVPRASERLVSRTTDTDSSSVYTPISFPTNVADSSPSNNSESIRKFMEVRKEKVST 583
+ D + E T T S V T I P S+R+FME RK++VS
Sbjct: 424 LDDFPAEKVEELKSFARTQTQHSDVPTMIPQQPPSLIDMPIARKASLRRFMEKRKDRVSV 603
Query: 584 LEEYYLTCP---SPRRYPGPRPERLVDPDEP-ILANPLHE 619
Y CP +P ++ P ++ IL N + E
Sbjct: 604 YSPYQRICPDSAAPEKHAESAPWLVLGAKST*ILVNSIRE 723
>TC80411 weakly similar to PIR|T47635|T47635 probable protein - Arabidopsis
thaliana, partial (8%)
Length = 1045
Score = 34.3 bits (77), Expect = 0.22
Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
Frame = +3
Query: 627 AQPDPVQQEPVQPDPEQSVSNHS---SVRSPNPLVDTSEPHLGASEPHVQTCDIGSPQGT 683
AQ PVQQ+PVQ ++ S +SP P V + +P + +P S +
Sbjct: 528 AQQKPVQQKPVQQPSRKNQKKDEQPVSAKSPKPAVKSPKPATKSPKPAQVNRKPYSKKNN 707
Query: 684 SEAHSSNHPTSP 695
SE++ S P P
Sbjct: 708 SESNPSEAPEKP 743
>TC78703 homologue to GP|13129456|gb|AAK13114.1 Putative retroelement pol
polyprotein {Oryza sativa} [Oryza sativa (japonica
cultivar-group)], partial (2%)
Length = 1235
Score = 34.3 bits (77), Expect = 0.22
Identities = 32/104 (30%), Positives = 48/104 (45%), Gaps = 7/104 (6%)
Frame = +3
Query: 409 SSVRSSSKSVVDSDADLNSFDALPISAMLKRSTNPLTLIPESQPAAQTTSQPNS-LRSSF 467
+S S S SV S + L+S S++ LT IP P +++ P+ L SF
Sbjct: 492 TSPPSPSPSVAPSPSPLSS-----------HSSDALTPIPPPSPLNGSSTPPSPVLDGSF 638
Query: 468 FQPSPNEA------PLWNMLQNQPTGPSDPTSPITIQYNPESEP 505
PSP + P+ + + P +D T+PIT +P SEP
Sbjct: 639 PPPSPLDGSTLTPPPVQQVGSSPPPLGTDVTNPITPTQSPVSEP 770
>TC77435 similar to GP|7211427|gb|AAF40306.1| RNA helicase {Vigna radiata},
partial (67%)
Length = 1828
Score = 33.9 bits (76), Expect = 0.29
Identities = 27/121 (22%), Positives = 51/121 (41%), Gaps = 1/121 (0%)
Frame = +1
Query: 317 SSKIRQRRRKMVLEESSEESDVPLTKKKKADQPKRKHDETSKPDDGNDGDNDGGPSPPKK 376
S K + ++K +L+ ++ KKK KRK + +D ++ G KK
Sbjct: 157 SPKSKSSKKKKLLQNDVVSEVEAVSAKKKESSKKRKKSSDDDEETKSDISSEEGSRKVKK 336
Query: 377 KKKQVRLVVKPTRVEPAAQVVRRIETPPRVTRSSVRSSSKSVVDSDADLNSFDAL-PISA 435
+KK+ + V+ + +V + + P V+ + + + N +AL PI A
Sbjct: 337 EKKKKKSKVEDEEIVEEEEVAVKKDDPNAVSNFRISEPLRMKLKE----NKIEALFPIQA 504
Query: 436 M 436
M
Sbjct: 505 M 507
>TC89754 similar to GP|21618273|gb|AAM67323.1 unknown {Arabidopsis
thaliana}, partial (88%)
Length = 759
Score = 33.9 bits (76), Expect = 0.29
Identities = 35/126 (27%), Positives = 51/126 (39%), Gaps = 11/126 (8%)
Frame = +2
Query: 611 PILANPLHEADPLAQQAQPDPVQQEPVQPDPEQSV-SNHSSVRSPNPL------VDTSEP 663
P NP + +P Q+ + + P+ P P QS+ S+ SS SP+P V S P
Sbjct: 29 PRCLNPTRK*NP-NQKTRFNKPPPSPIHPPPHQSIPSSTSSASSPSPSSAHHASVSNSHP 205
Query: 664 HLG----ASEPHVQTCDIGSPQGTSEAHSSNHPTSPETNLSIVPYTSLRPTSLSECINVF 719
+S P + S +S SSNHP S + + T + S C +V
Sbjct: 206 SPSPPPTSSSPSSSSPTSWSSPASSTTSSSNHPVSAQCKIP----TPAPLSQSSSCPDVL 373
Query: 720 NREASL 725
SL
Sbjct: 374 TVSTSL 391
>TC76827 similar to GP|17154773|gb|AAL35979.1 extensin-like protein {Cucumis
sativus}, partial (60%)
Length = 1093
Score = 33.9 bits (76), Expect = 0.29
Identities = 35/138 (25%), Positives = 53/138 (38%), Gaps = 1/138 (0%)
Frame = +3
Query: 373 PPKKKKKQVRLVVKPTRVEPAAQVVRRIETPPRVTRSSVRSSSKSVVDSDADLNSFDALP 432
PPKK K + +VKP V+P + + PP + + + LP
Sbjct: 198 PPKKHKPGKKPIVKPPIVKPPVTIPPTLPIPPVLPHLPIPPT----------------LP 329
Query: 433 ISAMLKRSTNPLTL-IPESQPAAQTTSQPNSLRSSFFQPSPNEAPLWNMLQNQPTGPSDP 491
I +L P TL IP + P T P +L P P+ N + + PS P
Sbjct: 330 IPPVLPHLPIPPTLPIPPTLPIPPTLPIPPTLPIPPVLPHLPVPPVLNPPSSGGSTPS-P 506
Query: 492 TSPITIQYNPESEPLTLE 509
TSP + P + ++
Sbjct: 507 TSPCPPKNKPAKDTCPID 560
>BQ140567 weakly similar to PIR|T49477|T494 phenol hydroxylase related
protein [imported] - Neurospora crassa, partial (15%)
Length = 329
Score = 33.1 bits (74), Expect = 0.49
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = +2
Query: 407 TRSSVRSSSKSVVDSDADLNSFDALPISAMLKRSTNPLTLIPESQPAAQTTSQPNSLRSS 466
TR+S ++ + + L+S + +RST+P T P S PA QTTS P + +
Sbjct: 2 TRTSPPQTATTSTTTRTRLSSRSPSSSTPRAQRSTSP-TSCPRSSPATQTTSTPTTCGTC 178
Query: 467 FFQ-PSPNEAPLW 478
P P P W
Sbjct: 179 ASPTPKPPHTPRW 217
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.312 0.128 0.362
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,527,933
Number of Sequences: 36976
Number of extensions: 354767
Number of successful extensions: 2428
Number of sequences better than 10.0: 112
Number of HSP's better than 10.0 without gapping: 2272
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2393
length of query: 904
length of database: 9,014,727
effective HSP length: 105
effective length of query: 799
effective length of database: 5,132,247
effective search space: 4100665353
effective search space used: 4100665353
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 63 (28.9 bits)
Lotus: description of TM0125.11