TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0122.9
         (460 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC93674 similar to GP|15292729|gb|AAK92733.1 putative polygalact...   358  2e-99
TC90178 similar to GP|13958032|gb|AAK50769.1 polygalacturonase {...   331  3e-91
TC91675 similar to GP|6624205|dbj|BAA88472.1 polygalacturonase {...   248  3e-66
CA919900 similar to GP|15292729|gb putative polygalacturonase PG...   234  5e-62
TC87651 similar to GP|15292729|gb|AAK92733.1 putative polygalact...   224  4e-59
TC83380 weakly similar to GP|10176984|dbj|BAB10216. polygalactur...   208  3e-54
BG588797 weakly similar to PIR|T08215|T08 polygalacturonase (EC ...   135  2e-42
BQ148150 weakly similar to GP|10185719|gb NTS1 protein {Nicotian...   142  4e-34
AW585498 weakly similar to GP|10177065|db polygalacturonase-like...   139  2e-33
BI309738 weakly similar to GP|15028105|gb putative polygalacturo...   127  7e-30
BF644949 similar to GP|15292729|gb putative polygalacturonase PG...   122  4e-28
AL376379 homologue to GP|13958032|gb polygalacturonase {Pisum sa...    99  3e-21
TC78631 similar to PIR|T05388|T05388 hypothetical protein F16G20...    88  8e-18
TC86720 similar to PIR|T47941|T47941 hypothetical protein F2A19....    86  4e-17
TC77765 similar to PIR|T47941|T47941 hypothetical protein F2A19....    83  3e-16
TC89269 similar to PIR|T05614|T05614 hypothetical protein F9D16....    79  4e-15
TC87011 weakly similar to GP|22136814|gb|AAM91751.1 unknown prot...    77  2e-14
BI309956 weakly similar to GP|7381227|gb|A polygalacturonase {Ly...    77  2e-14
TC82168 weakly similar to GP|11762132|gb|AAG40344.1 AT3g62110 {A...    75  7e-14
TC79890 similar to GP|11762132|gb|AAG40344.1 AT3g62110 {Arabidop...    71  8e-13

>TC93674 similar to GP|15292729|gb|AAK92733.1 putative polygalacturonase PG1
           {Arabidopsis thaliana}, partial (51%)
          Length = 745

 Score =  358 bits (920), Expect = 2e-99
 Identities = 162/247 (65%), Positives = 208/247 (83%)
 Frame = +3

Query: 195 SPVAIRFFMSSNLTVQGLRVKNSPQFNFRFDGCIKVHVESIYITAPKLSPNTDGIHIENT 254
           SP  IRFFMSSNL ++GL+++NSPQF+ +FDGC  V ++ + I+APKLSPNTDGIH+ NT
Sbjct: 3   SPTMIRFFMSSNLVLRGLKIQNSPQFHVKFDGCQGVLIDELSISAPKLSPNTDGIHLGNT 182

Query: 255 NDVKIYNSMISNGDDCVSIGSGCYDVDIKNITCGPGHGISIGSLGIHNSRACVSNITVRD 314
            DV IYNS+ISNGDDC+SIG GC +V++  +TC P HGISIGSLG+HNS ACVSN+TVR+
Sbjct: 183 RDVGIYNSLISNGDDCISIGPGCSNVNVDGVTCAPTHGISIGSLGVHNSHACVSNLTVRN 362

Query: 315 SMMKGTDNGVRIKTWQGGSGSVSGVKFSNIRMVNVRNPIIIDQFYCITEGCTNKTSAVFV 374
           S++K +DNG+RIKTWQGG+GSV+G+ F NI+M NVRN I IDQFYC+++ C N+TSAV+V
Sbjct: 363 SIIKESDNGLRIKTWQGGTGSVTGLTFDNIQMENVRNCINIDQFYCLSKECMNQTSAVYV 542

Query: 375 SNILYTNIKGTYDVRSLPMRFACSDSIPCTHLALSDIELLPAEGDIAHDPFCWNAYGDLQ 434
           +NI Y  IKGTYDVR+ P+ FACSD++ CT++ LS+IELLP EG++  DPFCWNAYG  +
Sbjct: 543 NNISYRKIKGTYDVRTPPIHFACSDTVACTNITLSEIELLPYEGELVDDPFCWNAYGRQE 722

Query: 435 TLTIPPV 441
           TLTIPP+
Sbjct: 723 TLTIPPL 743


>TC90178 similar to GP|13958032|gb|AAK50769.1 polygalacturonase {Pisum
           sativum}, partial (94%)
          Length = 1114

 Score =  331 bits (849), Expect = 3e-91
 Identities = 169/356 (47%), Positives = 227/356 (63%), Gaps = 21/356 (5%)
 Frame = +3

Query: 122 IVFKVEGTLMPPDGPESWPKNISRHQWLVFYRINGMSLEGSGLIDGRGEKWWD------- 174
           I+F+V+GT++ P    +W + +   QWL F ++ G +++G+G+ DGRG  WW        
Sbjct: 12  IIFQVDGTIIAPTNSNAWGRGLL--QWLDFTKLVGFTIQGNGIFDGRGSVWWQDTQYNDP 185

Query: 175 --------LPCKPHRQGPHW---TTLPG--PCDSPVAIRFFMSSNLTVQGLRVKNSPQFN 221
                   +P       P     ++L G  P   P AIRF+ S N TV G+ ++NSPQ +
Sbjct: 186 LDDEEKLLVPLNNTIVSPPMQIESSLGGKMPSIKPTAIRFYGSINPTVTGITIQNSPQCH 365

Query: 222 FRFDGCIKVHVESIYITAPKLSPNTDGIHIENTNDVKIYNSMISNGDDCVSIGSGCYDVD 281
            +FD C  V V  + I++P  SPNTDGIH++N+ DV IY S ++ GDDC+SI +GC +V 
Sbjct: 366 LKFDNCNGVLVHDVTISSPGDSPNTDGIHLQNSRDVLIYKSTMACGDDCISIQTGCSNVY 545

Query: 282 IKNITCGPGHGISIGSLGIHNSRACVSNITVRDSMMKGTDNGVRIKTWQGGSGSVSGVKF 341
           + N+ CGPGHGISIG LG  N+RACVSNITVRD  M  T NGVRIKTWQGGSGSV GV F
Sbjct: 546 VHNVDCGPGHGISIGGLGKDNTRACVSNITVRDVNMHNTMNGVRIKTWQGGSGSVQGVLF 725

Query: 342 SNIRMVNVRNPIIIDQFYCITEGCTNKTSAVFVSNILYTNIKGTYDVRSLPMRFACSDSI 401
           SNI++  V+ PIIIDQFYC    C N+T+AV ++ I Y  IKGTY V+  P+ FACSDS+
Sbjct: 726 SNIQVSQVQVPIIIDQFYCDKRNCKNQTAAVALTGINYEGIKGTYTVK--PVHFACSDSL 899

Query: 402 PCTHLALSDIELLPAEGDI-AHDPFCWNAYGDLQTLTIPPVSCLMQGTPQSWLDHD 456
           PC  ++L+ +EL P +     +DPFCW  YG+L+T T+PP+ CL         D D
Sbjct: 900 PCIDVSLTSVELQPVQDKYHLYDPFCWETYGELKTATVPPIDCLQNWETTEQSDSD 1067


>TC91675 similar to GP|6624205|dbj|BAA88472.1 polygalacturonase {Cucumis
           sativus}, partial (65%)
          Length = 1146

 Score =  248 bits (634), Expect = 3e-66
 Identities = 125/308 (40%), Positives = 189/308 (60%), Gaps = 2/308 (0%)
 Frame = +1

Query: 139 WPKNISRHQWLVFYRINGMSLEGSGLIDGRGEKWWDLPCKPHRQGPHWTTLPGPCD-SPV 197
           W   + R  WL F ++     +GSG+IDG G KWW   CK ++  P        C  +P 
Sbjct: 1   WDPKLPR-VWLDFSKLKKAVFQGSGVIDGSGSKWWAASCKKNKTNP--------CKGAPT 153

Query: 198 AIRFFMSSNLTVQGLRVKNSPQFNFRFDGCIKVHVESIYITAPKLSPNTDGIHIENTNDV 257
           A+    SS++ V+GL ++N+ Q +F    C  V +  + + +P  SPNTDGIHI  + +V
Sbjct: 154 ALTIDTSSSIKVKGLTIQNNQQMHFTISRCDSVRILGVKVASPGDSPNTDGIHISESTNV 333

Query: 258 KIYNSMISNGDDCVSIGSGCYDVDIKNITCGPGHGISIGSLGIHNSRACVSNITVRDSMM 317
            + +  I  GDDC+SI +   ++ +K I CGPGHGISIGSLG  NS   V+ + +  + +
Sbjct: 334 IVQDCKIGTGDDCISIVNASSNIKMKRIFCGPGHGISIGSLGKDNSTGVVTKVILDTAFL 513

Query: 318 KGTDNGVRIKTWQGGSGSVSGVKFSNIRMVNVRNPIIIDQFYCIT-EGCTNKTSAVFVSN 376
           KGT NG+RIKTWQGG+G V GV+F N+R+ NV NPI+IDQFYC +   C N++SA+ +S 
Sbjct: 514 KGTTNGLRIKTWQGGAGYVKGVRFQNVRVENVSNPILIDQFYCDSPTSCQNQSSALEISE 693

Query: 377 ILYTNIKGTYDVRSLPMRFACSDSIPCTHLALSDIELLPAEGDIAHDPFCWNAYGDLQTL 436
           I+Y N+ GT +  +  ++F CSD++PC++L LS+++L   +G +  + +C +A G    +
Sbjct: 694 IMYQNVSGTTN-SAKAIKFDCSDTVPCSNLVLSNVDLEKQDGTV--ETYCHSAQGFGYGV 864

Query: 437 TIPPVSCL 444
             P   CL
Sbjct: 865 VHPSAECL 888


>CA919900 similar to GP|15292729|gb putative polygalacturonase PG1
           {Arabidopsis thaliana}, partial (33%)
          Length = 752

 Score =  234 bits (597), Expect = 5e-62
 Identities = 102/160 (63%), Positives = 137/160 (84%)
 Frame = -2

Query: 292 GISIGSLGIHNSRACVSNITVRDSMMKGTDNGVRIKTWQGGSGSVSGVKFSNIRMVNVRN 351
           GISIGSLG+HNS+ACVSN+TVRD++++ +DNG+RIKTWQGG GSVS +KF NI+M NV N
Sbjct: 751 GISIGSLGVHNSQACVSNLTVRDTVIRESDNGLRIKTWQGGMGSVSNLKFENIQMENVGN 572

Query: 352 PIIIDQFYCITEGCTNKTSAVFVSNILYTNIKGTYDVRSLPMRFACSDSIPCTHLALSDI 411
            I+IDQ+YC+T+ C N+TSAV V+++ Y NIKGTYDVR+ P+ FACSD++ CT++ LS++
Sbjct: 571 CILIDQYYCLTKECLNQTSAVHVNDVSYKNIKGTYDVRTAPIHFACSDTVACTNITLSEV 392

Query: 412 ELLPAEGDIAHDPFCWNAYGDLQTLTIPPVSCLMQGTPQS 451
           ELLP EG++  DPFCWNAYG  +TLTIPP++CL +G P++
Sbjct: 391 ELLPFEGELLDDPFCWNAYGAQETLTIPPINCLREGDPET 272


>TC87651 similar to GP|15292729|gb|AAK92733.1 putative polygalacturonase PG1
           {Arabidopsis thaliana}, partial (35%)
          Length = 822

 Score =  224 bits (572), Expect = 4e-59
 Identities = 111/215 (51%), Positives = 146/215 (67%), Gaps = 5/215 (2%)
 Frame = +3

Query: 8   HILPLAFCIFSLTLFLSAQARHHSHTKHNK-----HSHSHKSTKTSPPPPPHNCYNATGI 62
           H L + +  F L    +   R+H HTK  K      S+S  S  + P P      ++  I
Sbjct: 186 HGLFILWITFILLNLRNVDGRNHLHTKQKKVSSLLPSNSSPSVPSDPYPNDPRDSSSDCI 365

Query: 63  FDVTTFGAVGDGIADDTVSFKMAWDTACQSELPGNVILVPKGFSFIIQSTIFTGPCQGGI 122
           FDVT+FGA+GDG ADDT +FK AW  AC  E    ++LVP+ ++F+I S IF+GPC+ G+
Sbjct: 366 FDVTSFGAIGDGSADDTPAFKKAWKAACAVE--SGILLVPENYTFMITSIIFSGPCKPGL 539

Query: 123 VFKVEGTLMPPDGPESWPKNISRHQWLVFYRINGMSLEGSGLIDGRGEKWWDLPCKPHRQ 182
           VF+V+G LM PDGP+SWP+  SR+QWLVFY+++ MSL G+G I+G G++WWDLPCKPHR 
Sbjct: 540 VFQVDGMLMAPDGPDSWPEADSRNQWLVFYKLDQMSLNGTGTIEGNGDQWWDLPCKPHR- 716

Query: 183 GPHWTTLPGPCDSPVAIRFFMSSNLTVQGLRVKNS 217
           GP   TL GPC SP  IRFFMSSNL V GL+++NS
Sbjct: 717 GPDGKTLSGPCGSPAMIRFFMSSNLYVNGLKIENS 821


>TC83380 weakly similar to GP|10176984|dbj|BAB10216. polygalacturonase-like
           protein {Arabidopsis thaliana}, partial (21%)
          Length = 1220

 Score =  208 bits (530), Expect = 3e-54
 Identities = 129/389 (33%), Positives = 198/389 (50%), Gaps = 2/389 (0%)
 Frame = +2

Query: 58  NATGIFDVTTFGAVGDGIADDTVSFKMAWDTACQSELPGNVILVPKGFSFIIQSTI-FTG 116
           N     +V  +GA GDG  DD+ +F  A+   C     GN ++VP G SF ++ T+ F+G
Sbjct: 77  NGEDTLNVIHYGAKGDGRTDDSKAFVDAFKALCGGRY-GNTLVVPNGHSFFVRPTLNFSG 253

Query: 117 PCQG-GIVFKVEGTLMPPDGPESWPKNISRHQWLVFYRINGMSLEGSGLIDGRGEKWWDL 175
           PC    I  K+ G ++ P   + W +  S   WL F+ I+G++L+GSG+I+G GE W   
Sbjct: 254 PCYSKNINIKIMGNILAPKRSD-WGRECSL-MWLHFFNISGLTLDGSGVINGNGEGW--- 418

Query: 176 PCKPHRQGPHWTTLPGPCDSPVAIRFFMSSNLTVQGLRVKNSPQFNFRFDGCIKVHVESI 235
             +   +G     + G    P A++F     L + GL   N P  +        + +  I
Sbjct: 419 --ESREKG-----IGGCPRIPTALQFDKCDGLQINGLTHINGPGAHIAVIDSQDITISHI 577

Query: 236 YITAPKLSPNTDGIHIENTNDVKIYNSMISNGDDCVSIGSGCYDVDIKNITCGPGHGISI 295
           +I +PK S NTDGI +  T  V I++  I +GDDC+++  G   V++ N+TCGPGHGIS+
Sbjct: 578 HINSPKKSHNTDGIDLTRTIGVNIHDIQIESGDDCIAVKGGSQFVNVSNVTCGPGHGISV 757

Query: 296 GSLGIHNSRACVSNITVRDSMMKGTDNGVRIKTWQGGSGSVSGVKFSNIRMVNVRNPIII 355
           GSLG H S   V + +V++    G D+ V+IKTW GG G    + F +I +     P+ I
Sbjct: 758 GSLGGHGSEEFVQHFSVKNCTFNGADSAVKIKTWPGGKGYAKHIIFEDIIINQTNYPVFI 937

Query: 356 DQFYCITEGCTNKTSAVFVSNILYTNIKGTYDVRSLPMRFACSDSIPCTHLALSDIELLP 415
           DQ Y  T     +  AV +SNI ++NI GT  +    +   C+  I C ++ L+ I +  
Sbjct: 938 DQHYMRT---PEQHQAVKISNITFSNIYGTC-IGEDAVVLDCA-KIGCYNITLNQINITS 1102

Query: 416 AEGDIAHDPFCWNAYGDLQTLTIPPVSCL 444
                     C N +G    +  P   C+
Sbjct: 1103INRKKPASVKCKNVHGTANDIIAPHGLCV 1189


>BG588797 weakly similar to PIR|T08215|T08 polygalacturonase (EC 3.2.1.15) 3
           precursor - muskmelon, partial (35%)
          Length = 631

 Score =  135 bits (340), Expect(3) = 2e-42
 Identities = 67/125 (53%), Positives = 84/125 (66%)
 Frame = +2

Query: 207 LTVQGLRVKNSPQFNFRFDGCIKVHVESIYITAPKLSPNTDGIHIENTNDVKIYNSMISN 266
           L V+ LR K+S Q +  F+ C  V V ++ + AP+ SPNTDGIH+  T ++ I N  I  
Sbjct: 2   LKVKNLRFKDSQQMHVVFERCFNVFVSNLIVRAPEDSPNTDGIHVAETQNIDIINCDIGT 181

Query: 267 GDDCVSIGSGCYDVDIKNITCGPGHGISIGSLGIHNSRACVSNITVRDSMMKGTDNGVRI 326
           GDDC+SI SG  +V   +ITCGPGHGISIGSLG  NS A VSN+ V  + + GT NGVRI
Sbjct: 182 GDDCISIVSGSKNVRAIDITCGPGHGISIGSLGADNSEAEVSNVVVNRAALTGTTNGVRI 361

Query: 327 KTWQG 331
           KTW G
Sbjct: 362 KTWPG 376



 Score = 43.1 bits (100), Expect(3) = 2e-42
 Identities = 19/32 (59%), Positives = 23/32 (71%)
 Frame = +3

Query: 327 KTWQGGSGSVSGVKFSNIRMVNVRNPIIIDQF 358
           K  QGGSG    +KF NI+M NV NP+IIDQ+
Sbjct: 363 KHGQGGSGYARNIKFMNIKMQNVTNPVIIDQY 458



 Score = 32.7 bits (73), Expect(3) = 2e-42
 Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = +1

Query: 359 YCI-TEGCTNKTSAVFVSNILYTNIKGTYDVRSLPMRFACS 398
           YC  TE C  +  AV +S +LY NI+GT     + ++F CS
Sbjct: 460 YCDQTEPCQERNKAVQLSQVLYQNIRGT-SASEIAIKFNCS 579


>BQ148150 weakly similar to GP|10185719|gb NTS1 protein {Nicotiana tabacum},
           partial (31%)
          Length = 669

 Score =  142 bits (357), Expect = 4e-34
 Identities = 79/206 (38%), Positives = 117/206 (56%), Gaps = 5/206 (2%)
 Frame = +2

Query: 99  ILVPKGFSFIIQSTIFTGPCQGGIVFKVEGTLMPPDGPESWPKNISRH---QWLVFYRIN 155
           +L+P G +F+   T+F GPC       VE       G      ++S +   +W  F  I+
Sbjct: 11  VLIPAG-TFVTGQTLFAGPCTSPKPITVEIV-----GKAQATTDLSEYYSPEWFQFENID 172

Query: 156 GMSLEGSGLIDGRGEKWWDL-PCKPHRQGPHWTTLPGPCDS-PVAIRFFMSSNLTVQGLR 213
           G+ L+GSG+ DG+G   W L  CK ++         G C S P +++F    N  VQ + 
Sbjct: 173 GLVLKGSGVFDGQGSISWPLNDCKQNK---------GNCASLPSSLKFDKIKNAIVQDVT 325

Query: 214 VKNSPQFNFRFDGCIKVHVESIYITAPKLSPNTDGIHIENTNDVKIYNSMISNGDDCVSI 273
             NS QF+F   GC  +   +++ITAP  SPNTDG+HI +++ + + NS+I+ GDDC+S+
Sbjct: 326 SLNSMQFHFHLHGCSNISFTNLHITAPGNSPNTDGMHISSSDFITVTNSVIATGDDCISV 505

Query: 274 GSGCYDVDIKNITCGPGHGISIGSLG 299
           G    ++ I  ITCGPGHGIS+GSLG
Sbjct: 506 GHSTSNITISGITCGPGHGISVGSLG 583


>AW585498 weakly similar to GP|10177065|db polygalacturonase-like protein
           {Arabidopsis thaliana}, partial (26%)
          Length = 583

 Score =  139 bits (350), Expect = 2e-33
 Identities = 71/160 (44%), Positives = 95/160 (59%), Gaps = 1/160 (0%)
 Frame = +3

Query: 216 NSPQFNFRFDGCIKVHVESIYITAPKLSPNTDGIHIENTNDVKIYNSMISNGDDCVSIGS 275
           N  + +     C K  + +I + AP  SPNTDGI I  + D+++ NS I+ GDDC++I +
Sbjct: 15  NPSRSHITLTSCKKGIISNIRLIAPGESPNTDGIDISASRDIQVLNSFIATGDDCIAISA 194

Query: 276 GCYDVDIKNITCGPGHGISIGSLGIHNSRACVSNITVRDSMMKGTDNGVRIKTWQGGSGS 335
           G   + I  ITCGPGHGISIGSLG       V ++ V++  +  T  GVRIKT QGG G 
Sbjct: 195 GSSVIKITAITCGPGHGISIGSLGARGDTDIVEDVHVKNCTLTETLTGVRIKTKQGGGGF 374

Query: 336 VSGVKFSNIRMVNVRNPIIIDQFYCITE-GCTNKTSAVFV 374
              + F NI+ V   NPI IDQFYC+ +  C N T A+ V
Sbjct: 375 ARRITFENIKFVRAHNPIWIDQFYCVNQMVCRNMTKAIKV 494


>BI309738 weakly similar to GP|15028105|gb putative polygalacturonase
           {Arabidopsis thaliana}, partial (31%)
          Length = 768

 Score =  127 bits (320), Expect = 7e-30
 Identities = 66/187 (35%), Positives = 103/187 (54%), Gaps = 1/187 (0%)
 Frame = +2

Query: 65  VTTFGAVGDGIADDTVSFKMAWDTACQSELPGNV-ILVPKGFSFIIQSTIFTGPCQGGIV 123
           +  FGA GDG  +DT +F   W+ AC   L G + I+ P   +F++      GPC+  I 
Sbjct: 236 IADFGARGDGFHNDTQAFLKVWEIACS--LSGFINIVFPYQKTFLVTPIDIGGPCRSKIT 409

Query: 124 FKVEGTLMPPDGPESWPKNISRHQWLVFYRINGMSLEGSGLIDGRGEKWWDLPCKPHRQG 183
            ++ G ++ P  P+ W   +++ +W+ F+ +N +S+EG G IDG G++WW   CK +   
Sbjct: 410 LRILGAIVAPRNPDVW-HGLNKRKWIYFHGVNHLSVEGGGRIDGMGQEWWSRSCKINTTN 586

Query: 184 PHWTTLPGPCDSPVAIRFFMSSNLTVQGLRVKNSPQFNFRFDGCIKVHVESIYITAPKLS 243
           P    LP    +P A+ F    +L V+ L V NS + +  F  C++V    + + AP LS
Sbjct: 587 P---CLP----APTALTFHKCKSLKVRNLTVLNSQKMHIAFTSCMRVVASRLKVLAPALS 745

Query: 244 PNTDGIH 250
           PNTDGIH
Sbjct: 746 PNTDGIH 766


>BF644949 similar to GP|15292729|gb putative polygalacturonase PG1
           {Arabidopsis thaliana}, partial (22%)
          Length = 673

 Score =  122 bits (305), Expect = 4e-28
 Identities = 67/154 (43%), Positives = 92/154 (59%), Gaps = 17/154 (11%)
 Frame = +1

Query: 18  SLTLFL-SAQARHHSHTKHNKHSHSHKSTKTSPPPP----------------PHNCYNAT 60
           ++ LF+ + + R+H H K  K S +   +  SPP P                P NC    
Sbjct: 238 TMILFIHNVEGRYH-HKKPKKTSPA--PSDPSPPSPSFPSDPYPYPNDPGESPSNC---- 396

Query: 61  GIFDVTTFGAVGDGIADDTVSFKMAWDTACQSELPGNVILVPKGFSFIIQSTIFTGPCQG 120
            +FDV +FGAVGDG ADDT +F+ AW  AC  +    V+L P+ + F I STIF+GPC+ 
Sbjct: 397 -VFDVRSFGAVGDGDADDTAAFRAAWKAACAVD--SGVLLAPENYCFKITSTIFSGPCKP 567

Query: 121 GIVFKVEGTLMPPDGPESWPKNISRHQWLVFYRI 154
           G+VF+++GTLM PDGP  WP+  S+ QWLVFYR+
Sbjct: 568 GLVFQIDGTLMAPDGPNCWPEADSKSQWLVFYRL 669


>AL376379 homologue to GP|13958032|gb polygalacturonase {Pisum sativum},
           partial (43%)
          Length = 459

 Score = 99.0 bits (245), Expect = 3e-21
 Identities = 55/155 (35%), Positives = 83/155 (53%), Gaps = 19/155 (12%)
 Frame = +1

Query: 133 PDGPESWPKNISRHQWLVFYRINGMSLEGSGLIDGRGEKWW-DLPC-------------- 177
           P  P +W       QWL   ++ G++++G+G+IDGRG  WW D P               
Sbjct: 1   PTNPNAWSGVTL--QWLECTKLEGITIQGNGVIDGRGSVWWQDFPYDNPIDDEEKLIVPL 174

Query: 178 ----KPHRQGPHWTTLPGPCDSPVAIRFFMSSNLTVQGLRVKNSPQFNFRFDGCIKVHVE 233
               KP     +      P + P A+RF+ S   TV G+ ++NSPQ + +FD C  V V 
Sbjct: 175 NQTQKPPMPVQNEMGRKMPSNKPTALRFYGSYGPTVTGITIQNSPQCHLKFDNCNGVLVH 354

Query: 234 SIYITAPKLSPNTDGIHIENTNDVKIYNSMISNGD 268
            + I++P  SPNTDGIH++N+ DV I++S ++ GD
Sbjct: 355 DVSISSPGDSPNTDGIHLQNSKDVLIHSSKLACGD 459


>TC78631 similar to PIR|T05388|T05388 hypothetical protein F16G20.200 -
           Arabidopsis thaliana, partial (82%)
          Length = 1613

 Score = 87.8 bits (216), Expect = 8e-18
 Identities = 85/321 (26%), Positives = 136/321 (41%), Gaps = 35/321 (10%)
 Frame = +3

Query: 65  VTTFGAVGDGIADDTVSFKMAWDTACQ-SELPGNVILVPKG------FSFIIQSTIFTGP 117
           VT FGA GDG   +T +F+ A D   Q S   G+ + VP G      F+     T+F   
Sbjct: 198 VTEFGAAGDGNTLNTKAFQSAIDHLSQYSSNGGSQLYVPPGRWLTGSFNLTSHFTLF--- 368

Query: 118 CQGGIVFKVEGTLMPPDGPESWP-------------KNISRHQWLVF-YRINGMSLEGS- 162
                    +  ++       WP                 R+  L+F   +  + + G+ 
Sbjct: 369 ------LHKDAVILGSQDESEWPVIDPLPSYGRGRDTQGGRYSSLIFGTNLTDVVITGNN 530

Query: 163 GLIDGRGEKWWDLPCKPHRQGPHWTTLPGPCDSPVAIRFFMSSNLTVQGLRVKNSPQFNF 222
           G +DG+GE WW    K H+    +T        P  I    S N+ +  L + NSP +N 
Sbjct: 531 GTLDGQGELWWQ---KFHKGKLTYTR-------PYLIEIMYSDNIQISNLTLVNSPSWNV 680

Query: 223 RFDGCIKVHVESIYITAPKLSPNTDGIHIENTNDVKIYNSMISNGDDCVSIGSG------ 276
                  + V+ I I AP  SPNTDGI+ ++  + +I +  I +GDDCV++ SG      
Sbjct: 681 HPVYSSNIIVQGITILAPVNSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGI 860

Query: 277 -----CYDVDIKNITC-GPGHG-ISIGSLGIHNSRACVSNITVRDSMMKGTDNGVRIKTW 329
                   + I+ +TC  P    I++GS         + ++   D +   +++GVRIKT 
Sbjct: 861 AYGMPTKQLVIRRLTCISPTSAVIALGS----EMSGGIQDVRAEDIVAINSESGVRIKTA 1028

Query: 330 QGGSGSVSGVKFSNIRMVNVR 350
            G  G V  +    + M  ++
Sbjct: 1029VGRGGYVKDIYVRRMTMKTMK 1091


>TC86720 similar to PIR|T47941|T47941 hypothetical protein F2A19.90 -
           Arabidopsis thaliana, partial (85%)
          Length = 1719

 Score = 85.5 bits (210), Expect = 4e-17
 Identities = 86/319 (26%), Positives = 130/319 (39%), Gaps = 37/319 (11%)
 Frame = +2

Query: 65  VTTFGAVGDGIADDTVSFKMAWDTACQ-SELPGNVILVPKG------FSFIIQSTIFTGP 117
           +T FG VGDG   +T +F+ A     Q     G+ + VP G      FS     T++   
Sbjct: 278 LTDFGGVGDGNTSNTKAFQSAISHLSQYGSQGGSQLYVPAGKWLTGSFSLTSHFTLYLDR 457

Query: 118 CQGGIVFKVEGTLMPPDGPESWP-------------KNISRHQWLVFYRINGMSLE---- 160
                    +  L+       WP                 R + L+F    G +L     
Sbjct: 458 ---------DAVLLASQDITEWPVLEPLPSYGRGRDAPAGRFRSLIF----GTNLTDVIV 598

Query: 161 --GSGLIDGRGEKWWDLPCKPHRQGPHWTTLPGPCDSPVAIRFFMSSNLTVQGLRVKNSP 218
             G+G IDG+G  WW    + HR+   +T        P  I    S ++ +  L + NSP
Sbjct: 599 TGGNGTIDGQGAFWWQ---QFHRKKLKYTR-------PYLIELMFSDSIQISNLTLLNSP 748

Query: 219 QFNFRFDGCIKVHVESIYITAPKLSPNTDGIHIENTNDVKIYNSMISNGDDCVSIGSGCY 278
            +N        + ++ I I AP  SPNTDGI+ ++  + KI +  I +GDDCV++ SG  
Sbjct: 749 SWNVHPVYSSNIIIQGITIIAPISSPNTDGINPDSCTNTKIEDCYIVSGDDCVAVKSGWD 928

Query: 279 DVDIK-----------NITCGPGHGISIGSLGIHNSRACVSNITVRDSMMKGTDNGVRIK 327
           +  IK            +TC      +I +LG   S   + ++   D     T++GVRIK
Sbjct: 929 EYGIKFGWPTKQLVIRRLTCISPFSATI-ALGSEMSGG-IQDVRAEDITAIRTESGVRIK 1102

Query: 328 TWQGGSGSVSGVKFSNIRM 346
           T  G  G V  +      M
Sbjct: 1103TAVGRGGYVKDIYVKRFTM 1159


>TC77765 similar to PIR|T47941|T47941 hypothetical protein F2A19.90 -
           Arabidopsis thaliana, partial (61%)
          Length = 1027

 Score = 82.8 bits (203), Expect = 3e-16
 Identities = 79/294 (26%), Positives = 124/294 (41%), Gaps = 33/294 (11%)
 Frame = +3

Query: 68  FGAVGDGIADDTVSFKMAWDTACQSELPG-NVILVPKG------FSFIIQSTIFTGPCQG 120
           FG VGDG   +T +FK A     Q+   G + + VP G      FS I   T++      
Sbjct: 201 FGGVGDGKTSNTKAFKSAISHLSQNASEGGSQLYVPAGKWLTGSFSLISHFTLY------ 362

Query: 121 GIVFKVEGTLMPPDGPESWP-------------KNISRHQWLVF-YRINGMSLEG-SGLI 165
                 +  L+       WP                 RH  L+F   +  + + G +G I
Sbjct: 363 ---LHKDAVLLASQDINEWPVIKPLPSYGRGRDAAAGRHTSLIFGTNLTDVIVTGDNGTI 533

Query: 166 DGRGEKWWDLPCKPHRQGPHWTTLPGPCDSPVAIRFFMSSNLTVQGLRVKNSPQFNFRFD 225
           DG+G  WW    + H +   +T        P  I    S N+ +  L + +SP +N    
Sbjct: 534 DGQGSFWWQ---QFHNKKLKYTR-------PYLIELMFSDNIQISNLTLLDSPSWNIHPV 683

Query: 226 GCIKVHVESIYITAPKLSPNTDGIHIENTNDVKIYNSMISNGDDCVSIGSGCYDVDIK-- 283
               + ++ I I AP  SPNTDGI+ ++  + KI +  I +GDDCV++ SG  +  IK  
Sbjct: 684 YSSNIIIKGITIIAPIRSPNTDGINPDSCTNTKIEDCYIVSGDDCVAVKSGWDEYGIKFG 863

Query: 284 ---------NITCGPGHGISIGSLGIHNSRACVSNITVRDSMMKGTDNGVRIKT 328
                     +TC   +  +I +LG   S   + ++   D     T++ +RIKT
Sbjct: 864 WPTKQLVIRRLTCISPYSATI-ALGSEMSGG-IQDVRAEDITAVHTESXIRIKT 1019


>TC89269 similar to PIR|T05614|T05614 hypothetical protein F9D16.290 -
           Arabidopsis thaliana, partial (60%)
          Length = 923

 Score = 79.0 bits (193), Expect = 4e-15
 Identities = 73/267 (27%), Positives = 117/267 (43%), Gaps = 34/267 (12%)
 Frame = +1

Query: 65  VTTFGAVGDGIADDTVSFKMA-WDTACQSELPGNVILVPKG------FSFIIQSTIFTGP 117
           +T FG VGD    ++ +F+ A +         G ++ VP G      F+     T++   
Sbjct: 166 ITDFGGVGDSKTLNSKAFRAAIYRIQHLRRRGGTLLYVPPGVYLTDSFNLTSHMTLYLA- 342

Query: 118 CQGGIVFKVEGTLMPPDGPESWP-----------KNISRHQWLVFYRINGMS---LEG-S 162
              G V K    L       +WP           + +   +++ F   +G+    + G +
Sbjct: 343 --AGAVIKATQRL------RNWPLIAPLPSYGRGRELPGGRYISFIHGDGVRDVIITGEN 498

Query: 163 GLIDGRGEKWWDLPCKPHRQGPHWTTLPGPCDSPVAIRFFMSSNLTVQGLRVKNSPQFNF 222
           G IDG+G+ WW++          W         P  + F  S N+ +  +  KNSP +N 
Sbjct: 499 GTIDGQGDVWWNM----------WRQRTLQFTRPNLVEFLNSRNIIISNVIFKNSPFWNI 648

Query: 223 RFDGCIKVHVESIYITAPKLSPNTDGIHIENTNDVKIYNSMISNGDDCVSIGSG------ 276
               C  V V  + I AP+ SPNTDGI  +++++V I +S IS GDD V++ SG      
Sbjct: 649 HPVYCSNVVVRYVTILAPRDSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDAYGI 828

Query: 277 -----CYDVDIKNIT-CGPGHGISIGS 297
                  D+ I+ IT   P  GI++GS
Sbjct: 829 SYGRPSNDITIRRITGSSPFAGIALGS 909


>TC87011 weakly similar to GP|22136814|gb|AAM91751.1 unknown protein
           {Arabidopsis thaliana}, partial (79%)
          Length = 1405

 Score = 76.6 bits (187), Expect = 2e-14
 Identities = 85/342 (24%), Positives = 138/342 (39%), Gaps = 39/342 (11%)
 Frame = +3

Query: 51  PPPHNCYNATGIFDVTTFGAVGDGIADDTVSFKMA-WDTACQSELPGNVILVPKG----- 104
           P PH+         +  FGAVGDG   +T++F+ A +     ++  G  + VP G     
Sbjct: 297 PRPHSV-------SILEFGAVGDGKTLNTIAFQNAIFYLKSFADKGGAQLYVPPGNWLTG 455

Query: 105 -FSFIIQSTIFT----------GPCQGGIVFKVEGTLMPPDGPESWPKNISRHQWLVFYR 153
            F+     T+F            P    I+  +       D P+   K++          
Sbjct: 456 SFNLTSHLTLFLEKGAVIIGSQDPSHWNIIEALPSYGRGKDVPDGRYKSL---------- 605

Query: 154 INGMSLE------GSGLIDGRGEKWWDLPCKPH---RQGPHWTTLPGPCDSPVAIRFFMS 204
           ING  LE       +G IDG G  WWD   K H      PH   +       ++  F + 
Sbjct: 606 INGNQLEDVVITGNNGTIDGNGMVWWD-SYKSHSLNHSRPHLGEI-------ISSDFVVV 761

Query: 205 SNLTVQGLRVKNSPQFNFRFDGCIKVHVESIYITAPKLSPNTDGIHIENTNDVKIYNSMI 264
           SNLT       N+P ++     C  VH+++I I+ P  SP T GI  +++N+V I +  +
Sbjct: 762 SNLTFW-----NAPAYSIHPGYCSNVHIQNISISTPPESPYTAGIVPDSSNNVCIEDCFV 926

Query: 265 SNGDDCVSIGSGCYDVDIK-------------NITCGPGHGISIGSLGIHNSRACVSNIT 311
           S G D +S+ SG     I              ++    G  IS G+         +S + 
Sbjct: 927 SIGFDAISLKSGWDQYGINYGRPSEKVHIRRVHLRAFTGSAISFGT----EMSGGISKVL 1094

Query: 312 VRDSMMKGTDNGVRIKTWQGGSGSVSGVKFSNIRMVNVRNPI 353
           +    +  +++G+  +T +G  G +  +  S+I M NV   I
Sbjct: 1095IEHVNIFNSNSGIEFRTTKGRGGYIKEIALSHIEMENVHTAI 1220


>BI309956 weakly similar to GP|7381227|gb|A polygalacturonase {Lycopersicon
           esculentum}, partial (21%)
          Length = 512

 Score = 76.6 bits (187), Expect = 2e-14
 Identities = 44/95 (46%), Positives = 55/95 (57%), Gaps = 1/95 (1%)
 Frame = +3

Query: 348 NVRNPIIIDQFYCITEG-CTNKTSAVFVSNILYTNIKGTYDVRSLPMRFACSDSIPCTHL 406
           NV NPIIIDQ+YC +   C N+TSAV V NI + NI+GT       ++FACSD+ PC  L
Sbjct: 12  NVSNPIIIDQYYCDSRHPCKNQTSAVQVGNISFINIQGT-SATEETIKFACSDASPCEGL 188

Query: 407 ALSDIELLPAEGDIAHDPFCWNAYGDLQTLTIPPV 441
            L +I L    G      +CW A+G  Q    PPV
Sbjct: 189 YLENIFLRSYFGGNTRS-YCWQAHGSAQGYVYPPV 290


>TC82168 weakly similar to GP|11762132|gb|AAG40344.1 AT3g62110 {Arabidopsis
           thaliana}, partial (33%)
          Length = 587

 Score = 74.7 bits (182), Expect = 7e-14
 Identities = 56/163 (34%), Positives = 80/163 (48%), Gaps = 13/163 (7%)
 Frame = +3

Query: 204 SSNLTVQGLRVKNSPQFNFRFDGCIKVHVESIYITAPKLSPNTDGIHIENTNDVKIYNSM 263
           S N+ V  L  +NSP +      C  V ++ + I AP  +PNTDGI  +++ +V I ++ 
Sbjct: 48  SENVLVSNLTFRNSPFWTIHPVYCSNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDNY 227

Query: 264 ISNGDDCVSIGSGCYDVDI------KNI-------TCGPGHGISIGSLGIHNSRACVSNI 310
           I +GDD V+I SG     I       NI       T     G+ IGS         +SNI
Sbjct: 228 IESGDDLVAIKSGWDQYGIAVAKPSTNIIVSRVSRTTPTCSGVGIGS----EMSGGISNI 395

Query: 311 TVRDSMMKGTDNGVRIKTWQGGSGSVSGVKFSNIRMVNVRNPI 353
           T+ +  +  +  GVRIK+  G  G +  V  SNIRM  V+ PI
Sbjct: 396 TIENLHVWNSAAGVRIKSDNGRGGYIKNVSISNIRMERVKIPI 524


>TC79890 similar to GP|11762132|gb|AAG40344.1 AT3g62110 {Arabidopsis
           thaliana}, partial (55%)
          Length = 1151

 Score = 71.2 bits (173), Expect = 8e-13
 Identities = 60/200 (30%), Positives = 89/200 (44%), Gaps = 12/200 (6%)
 Frame = +3

Query: 162 SGLIDGRGEKWWDLPCKPHRQGPHWTTLPGPCDSPVAIRFFMSSNLTVQGLRVKNSPQFN 221
           +G IDG+G  WW    K   +    T        P  +    S+ + +      NSP + 
Sbjct: 57  NGTIDGQGSIWWS---KFRNKTLDHTR-------PHLVELINSTEVLISNATFLNSPFWT 206

Query: 222 FRFDGCIKVHVESIYITAPKLSPNTDGIHIENTNDVKIYNSMISNGDDCVSIGSGCYDVD 281
                C  V V+++ I  P  SPNTDGI  +++++V I +  IS GDD +SI SG  +  
Sbjct: 207 IHPVYCSNVTVQNVTIIVPFGSPNTDGIDPDSSDNVCIEDCYISTGDDLISIKSGWDEYG 386

Query: 282 IK------NITC------GPGHGISIGSLGIHNSRACVSNITVRDSMMKGTDNGVRIKTW 329
           I       NI+           GI+IGS         VS +   D  +  + + +RIKT 
Sbjct: 387 ISFGRPSTNISIHRLTGRTTSAGIAIGS----EMSGGVSEVYAEDIYIFDSKSAIRIKTS 554

Query: 330 QGGSGSVSGVKFSNIRMVNV 349
            G  G V  V  SN+ ++NV
Sbjct: 555 PGRGGYVRNVYISNMTLINV 614


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.321    0.138    0.449 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,569,301
Number of Sequences: 36976
Number of extensions: 330854
Number of successful extensions: 3406
Number of sequences better than 10.0: 102
Number of HSP's better than 10.0 without gapping: 2930
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3248
length of query: 460
length of database: 9,014,727
effective HSP length: 99
effective length of query: 361
effective length of database: 5,354,103
effective search space: 1932831183
effective search space used: 1932831183
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)