Lotus
BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0122.7
         (125 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC78405 peroxidase precursor                                           25  6.0
BG451706 weakly similar to GP|15722495|emb macrofage activating ...    25  7.9
TC77821 similar to GP|21618197|gb|AAM67247.1 putative aminotrans...    25  7.9

>TC78405 peroxidase precursor
          Length = 988

 Score = 25.4 bits (54), Expect = 6.0
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -2

Query: 91  SRSFSPLSLDVVTKAEKLSLSDGRF 115
           S +F P  L +    EKL++ DGRF
Sbjct: 582 SFTFKPCDLKLEISCEKLNVGDGRF 508


>BG451706 weakly similar to GP|15722495|emb macrofage activating
          glycoprotein {Filobasidiella neoformans}, partial (20%)
          Length = 644

 Score = 25.0 bits (53), Expect = 7.9
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = -3

Query: 53 MNCKEELYLLQIDAKKLGD 71
          +NC+E+  LL ID  K+GD
Sbjct: 99 LNCREKSQLLTIDRIKVGD 43


>TC77821 similar to GP|21618197|gb|AAM67247.1 putative aminotransferase
           {Arabidopsis thaliana}, partial (93%)
          Length = 1631

 Score = 25.0 bits (53), Expect = 7.9
 Identities = 11/28 (39%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
 Frame = -1

Query: 1   MSGIFVYRISTAKEWEEL-QANGSTFGG 27
           ++G F+Y++ T K W+ L + N S F G
Sbjct: 419 LNGCFLYKVWTIKIWKTLTKINSSMFDG 336


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.319    0.136    0.394 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,936,767
Number of Sequences: 36976
Number of extensions: 47480
Number of successful extensions: 226
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 226
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 226
length of query: 125
length of database: 9,014,727
effective HSP length: 84
effective length of query: 41
effective length of database: 5,908,743
effective search space: 242258463
effective search space used: 242258463
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)


Lotus: description of TM0122.7