BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0117b.11
(669 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC89884 similar to GP|2459431|gb|AAB80666.1| unknown protein {Ar... 380 e-114
TC80446 similar to GP|21740740|emb|CAD40549. OSJNBa0072K14.5 {Or... 209 3e-54
TC86635 weakly similar to GP|9758600|dbj|BAB09233.1 gene_id:MDF2... 49 6e-06
TC85251 homologue to PIR|JQ2128|JQ2128 metallothionein - soybean... 42 8e-04
TC79359 weakly similar to PIR|S49915|S49915 extensin-like protei... 40 0.002
TC87439 weakly similar to GP|5139695|dbj|BAA81686.1 expressed in... 40 0.002
BQ751207 weakly similar to GP|604427|gb|AA ACOB protein {Emerice... 40 0.003
TC83532 similar to PIR|T38639|T38639 proteasome component PUP2 h... 39 0.005
TC91356 similar to GP|20151585|gb|AAM11152.1 LD24077p {Drosophil... 39 0.008
BE941260 similar to GP|9279681|dbj| gb|AAB80666.1~gene_id:MDJ14.... 39 0.008
TC86898 similar to GP|18376007|emb|CAB91741. probable ATP citrat... 39 0.008
TC86766 weakly similar to PIR|T06291|T06291 extensin homolog T9E... 38 0.011
TC79599 similar to GP|9757867|dbj|BAB08454.1 gb|AAD30228.1~gene_... 38 0.011
BQ144052 weakly similar to GP|21327989|dbj contains ESTs AU09387... 38 0.014
TC85985 similar to GP|5139695|dbj|BAA81686.1 expressed in cucumb... 37 0.019
TC76936 similar to GP|20160782|dbj|BAB89723. putative nascent po... 37 0.032
TC77337 weakly similar to GP|4019275|gb|AAC95573.1| orf 48 {Atel... 36 0.055
AW690594 similar to GP|23498163|emb hypothetical protein {Plasmo... 36 0.055
TC82261 similar to GP|10177249|dbj|BAB10717. contains similarity... 36 0.055
BI264438 similar to GP|21427467|gb actin-related protein 6 {Arab... 36 0.055
>TC89884 similar to GP|2459431|gb|AAB80666.1| unknown protein {Arabidopsis
thaliana}, partial (13%)
Length = 878
Score = 380 bits (976), Expect(2) = e-114
Identities = 195/245 (79%), Positives = 212/245 (85%), Gaps = 2/245 (0%)
Frame = +2
Query: 390 SLSRKFSSYVLPTPVDAKSSISSGSNNPKPSKMQTNSNEATTNLWHSSPLEQKKHET-IR 448
SLSRKFSSYVLPTPVDAKS IS + PKPS MQTN NE T NLWHSSPL+QKKHE IR
Sbjct: 2 SLSRKFSSYVLPTPVDAKSPISFFPDKPKPSTMQTNLNEPTKNLWHSSPLDQKKHEKDIR 181
Query: 449 DEFSSPTVRNAQSVLKESNSNTATTRLPPPLVDGLLSSNHDYVSAYSKKIKRHAFSGPLT 508
DE S PT+RN QS L+ESN+N + TRLP PLVDG S NHD VSAYSKKIKRHAFSGPLT
Sbjct: 182 DEHSDPTIRNTQSALRESNNNASFTRLPLPLVDGPASLNHDNVSAYSKKIKRHAFSGPLT 361
Query: 509 SNPMPTRPVSVDSVQMFSGPLLPTPIPQPPSSSPKVSPSASPTIVSSPKISELHELPRPP 568
SNP PTRPVS++++Q+FSGPLLPT IPQPPSSSPKVSPSASPTI+SSPKISELHELPRPP
Sbjct: 362 SNPWPTRPVSMENIQLFSGPLLPTRIPQPPSSSPKVSPSASPTILSSPKISELHELPRPP 541
Query: 569 TNFPSNSRLLGLVGYSGPLVPRGQKVSAPNNLVISSAASPLPIPPQAMARSFSIPSSG-A 627
N P NSRLLGL+G+SGPLV RGQ VSA NNLV+SS ASPLP+PPQAM+RSFSIPSSG A
Sbjct: 542 ANSPPNSRLLGLMGHSGPLVSRGQNVSAANNLVVSSVASPLPMPPQAMSRSFSIPSSGSA 721
Query: 628 RVTAL 632
RV AL
Sbjct: 722 RVAAL 736
Score = 49.3 bits (116), Expect(2) = e-114
Identities = 24/31 (77%), Positives = 27/31 (86%)
Frame = +1
Query: 639 ESSHISSISEDIASPPLTPIALSNSRPSSDG 669
ESSH SS+SE+IA P LTPIALS+SRPS DG
Sbjct: 754 ESSHTSSLSEEIAFPSLTPIALSSSRPSLDG 846
>TC80446 similar to GP|21740740|emb|CAD40549. OSJNBa0072K14.5 {Oryza
sativa}, partial (11%)
Length = 798
Score = 209 bits (532), Expect = 3e-54
Identities = 116/225 (51%), Positives = 154/225 (67%), Gaps = 6/225 (2%)
Frame = +3
Query: 191 RERGRSKGGKTETFSLQQLQTARDEYDEEATLFVFRLKSLKQGQSRSLLTQAARHHAAQL 250
+E+G+SK GK E + Q L+ A DEY+EEATL FRLKSLKQGQSRSLLTQAARHHAAQL
Sbjct: 132 KEKGKSKSGKGENITSQHLKAAHDEYEEEATLCAFRLKSLKQGQSRSLLTQAARHHAAQL 311
Query: 251 CFFKKAVKSLETVEPHVKSVTEQQHIDYHFNGLEEEDGDEGDEGYEDDDGYDENDDGELS 310
FF+K +KSLE VEPHV+ V E QHIDY F+GLE++DG+ E ++ Y+ + GELS
Sbjct: 312 NFFRKGLKSLEAVEPHVRMVAELQHIDYQFSGLEDDDGEGSFEYDGNEYEYEATEGGELS 491
Query: 311 FDYGQIEQEQDVSTSRNSMELDQVELTLPRGSTAEAAKENLDKLQRNLFSFRV------R 364
F+Y +DV TS NS E+++ + + R ST E A+ +LDK + F+V R
Sbjct: 492 FNY---RSNKDVPTSPNSAEVEESDRSNIRASTTETAETSLDK---SHVDFKVSNRDPPR 653
Query: 365 TGSQSAPLFADNKPDSSEKLRQMRPSLSRKFSSYVLPTPVDAKSS 409
S SAP+FA+ K D +EK+RQ+ S + K ++YVLP PV+ K +
Sbjct: 654 VSSYSAPIFAEKKFDPAEKVRQLLSSSAAKPNAYVLPLPVNIKET 788
Score = 34.7 bits (78), Expect = 0.12
Identities = 19/40 (47%), Positives = 28/40 (69%), Gaps = 2/40 (5%)
Frame = +1
Query: 35 EELAQATRDM-QDMRDCYDTLLSAAAATAS-SAYEFAESL 72
+ELA A + M ++RDCY+ + +AAAAT YE++ESL
Sbjct: 4 QELALAAKYMLNEIRDCYENMNAAAAATEKREVYEYSESL 123
>TC86635 weakly similar to GP|9758600|dbj|BAB09233.1
gene_id:MDF20.10~pir||T08929~similar to unknown protein
{Arabidopsis thaliana}, partial (32%)
Length = 1963
Score = 48.9 bits (115), Expect = 6e-06
Identities = 53/198 (26%), Positives = 87/198 (43%), Gaps = 9/198 (4%)
Frame = +2
Query: 284 EEEDGDEGDEGYEDDDGYDENDDGELSFDYGQIEQEQDVSTSRNSMELDQVELTLPRGST 343
+ ED EG+E E++D END E S D + E++ S + E + V+ T
Sbjct: 893 DTEDESEGEEKNEENDDEPENDIPEKSEDETPQKSERE-DKSDSGSESEDVKKRKRPSKT 1069
Query: 344 AEAAKENL--DKLQRNLFSFRVRT-GSQSAPLFADN-KPDSSEKLRQMRPSLSRKFSS-- 397
+ A KE+ K +++ + + R+ + AP + N +P S + + + SRK S
Sbjct: 1070 SSAKKESAGRSKTEKSTVTNKSRSPPPKRAPKKSSNTRPKSDDDINESPKVFSRKKKSEQ 1249
Query: 398 ---YVLPTPVDAKSSISSGSNNPKPSKMQTNSNEATTNLWHSSPLEQKKHETIRDEFSSP 454
+ TP KSS S K +K + E + SSP + + H+ I +
Sbjct: 1250 GGKQKISTPTPTKSSSKSKEKTEKVTKGKGKKKETS-----SSPTDDQLHDAICE----- 1399
Query: 455 TVRNAQSVLKESNSNTAT 472
+LKE + NTAT
Sbjct: 1400 -------ILKEVDFNTAT 1432
>TC85251 homologue to PIR|JQ2128|JQ2128 metallothionein - soybean, partial
(93%)
Length = 1554
Score = 42.0 bits (97), Expect = 8e-04
Identities = 59/272 (21%), Positives = 98/272 (35%), Gaps = 11/272 (4%)
Frame = -2
Query: 406 AKSSISSGSNNPKPSKMQTNSNEATTNLWHSSPLEQKKHETIRDEFSSPTVRNAQSVL-- 463
A +S ++ S + +M SN + + H T+ F T+ + +L
Sbjct: 1040 AGTSTATVSTTARHFQMMMISNTNKQQKMNDLRQQNNSHTTMATMFWVMTLLSLSCLLGF 861
Query: 464 KESNSNTATTRLPPPLVDGLLSSNHDYVSAYSKKIKRHAFSGPLTSNPMPT-----RPVS 518
TA T+LPP + ++ + + S P+TS P T PV+
Sbjct: 860 NAQAPATAPTKLPP--------TTPTAITPVTTQPPTVVASPPITSQPPVTVAPKSAPVT 705
Query: 519 VDSVQMFSGPLLPTPIPQPPSSSPKVSPSASPTIVSSPKISELHELPRPPTNFPSNSRLL 578
+ ++ P PQPP SSP +P+ P + PKIS + PP P +
Sbjct: 704 SPAPKIAPASSPKVPPPQPPKSSPVSTPTLPPPLPPPPKISPT-PVQTPPAPAPVKA--- 537
Query: 579 GLVGYSGPLVPRGQKVSAPNNLVISSAASPLPIPPQAMARSFSIPSSG----ARVTALHS 634
P + AP + + P+P P A+ P S R H
Sbjct: 536 --TPVPAPAPAKQAPTPAP------ATSPPIPAPTPAIEAPVPAPESSKPKRRRHRPKHR 381
Query: 635 SSALESSHISSISEDIASPPLTPIALSNSRPS 666
+ + I + +PP A S++ P+
Sbjct: 380 RHQAPAPAPTVIHKSPPAPPTDTTADSDTAPA 285
>TC79359 weakly similar to PIR|S49915|S49915 extensin-like protein - maize,
partial (3%)
Length = 1170
Score = 40.4 bits (93), Expect = 0.002
Identities = 44/146 (30%), Positives = 63/146 (43%), Gaps = 3/146 (2%)
Frame = +3
Query: 510 NPMPTRPVSVDSVQMFSGPLLPTPIPQPPSSSPKVSP--SASPTIVSSPKISELHELPRP 567
+P + P +V P P PP+ SP V P S SP I S +S P
Sbjct: 318 SPTLSPPSQTPAVSPSGSASTPPPATSPPAKSPAVQPPSSVSPAISPSNNVSS-----TP 482
Query: 568 PTNFPSNSRLLGLVG-YSGPLVPRGQKVSAPNNLVISSAASPLPIPPQAMARSFSIPSSG 626
P + P++S V S P+ VS+P SSA P A A + ++PSS
Sbjct: 483 PVSSPASSPPTAAVSPVSSPV--EAPSVSSPPE--ASSAGIPSSSATPADAPAATLPSSK 650
Query: 627 ARVTALHSSSALESSHISSISEDIAS 652
+ T+ SSS E+S + ++D S
Sbjct: 651 SPGTSPASSSP-ETSQGPAAADDSGS 725
>TC87439 weakly similar to GP|5139695|dbj|BAA81686.1 expressed in cucumber
hypocotyls {Cucumis sativus}, partial (57%)
Length = 897
Score = 40.4 bits (93), Expect = 0.002
Identities = 36/129 (27%), Positives = 47/129 (35%)
Frame = +3
Query: 509 SNPMPTRPVSVDSVQMFSGPLLPTPIPQPPSSSPKVSPSASPTIVSSPKISELHELPRPP 568
S P T PVS + P P P+ P SS P SP A+ + P S PP
Sbjct: 135 STPAATTPVSSPVAAPPTTPTTPAPVASPKSSPPATSPKAAAPTATPPAASS------PP 296
Query: 569 TNFPSNSRLLGLVGYSGPLVPRGQKVSAPNNLVISSAASPLPIPPQAMARSFSIPSSGAR 628
P ++ V P P VS+P A +P+ P A PS G +
Sbjct: 297 AVTPVSTPPPAPVPVKSP--PTPAPVSSP------PAVTPVAAPTTTPAVPAPAPSKGKK 452
Query: 629 VTALHSSSA 637
H + A
Sbjct: 453 NKKKHGAPA 479
>BQ751207 weakly similar to GP|604427|gb|AA ACOB protein {Emericella
nidulans}, partial (12%)
Length = 758
Score = 40.0 bits (92), Expect = 0.003
Identities = 44/175 (25%), Positives = 74/175 (42%), Gaps = 20/175 (11%)
Frame = +1
Query: 423 QTNSNEATTNLWHSSPLEQKKHETIRDEFSSPTVRNAQSVLKESNSN--TATTRLPPPLV 480
Q + + +T L HS P + + SSP Q+ + NS+ + PPP
Sbjct: 34 QWSKRKPSTLLSHSWP*ANPQPLPAQPPTSSPARHPTQTPMSSQNSSKPLRSRPSPPPTF 213
Query: 481 DGLLSSNHDYVSAYSKKIK-----RHAFSGPLTSNPMPTRPVSVDS-VQMFSGPLLPTPI 534
S+ ++A++ I A + P ++ P P+ + S + + P PTP
Sbjct: 214 TPTSPSSSFSLTAHTPTISPPPPPPPAITSPSSTPPRPSSSANSPS*LSLTPAPTSPTPP 393
Query: 535 PQPP-----------SSSPKVSPSAS-PTIVSSPKISELHELPRPPTNFPSNSRL 577
PP SSSP+ +P++S P+ + S L LP T+ P+ SR+
Sbjct: 394 YSPPSTYRRPAFSRTSSSPQSTPASSMPSSTLPVRSSRLTGLPPYATSHPAPSRI 558
Score = 37.7 bits (86), Expect = 0.014
Identities = 47/155 (30%), Positives = 68/155 (43%), Gaps = 19/155 (12%)
Frame = +1
Query: 531 PTPIPQ-PPSSSPKVSPSASPTIVSSPKISELHELPRPPTNF----PSNS-RLLGLVGYS 584
P P+P PP+SSP P+ +P + S L P PP F PS+S L
Sbjct: 91 PQPLPAQPPTSSPARHPTQTP-MSSQNSSKPLRSRPSPPPTFTPTSPSSSFSLTAHTPTI 267
Query: 585 GPLVPRGQKVSAPNNL---VISSAASP----LPIPPQAMARSFSIPSSGARVTALHSSSA 637
P P +++P++ SSA SP L P + +S PS+ R +SS+
Sbjct: 268 SPPPPPPPAITSPSSTPPRPSSSANSPS*LSLTPAPTSPTPPYSPPSTYRRPAFSRTSSS 447
Query: 638 LESSHISSISED---IASPPLT---PIALSNSRPS 666
+S+ SS+ + S LT P A S+ PS
Sbjct: 448 PQSTPASSMPSSTLPVRSSRLTGLPPYATSHPAPS 552
Score = 37.0 bits (84), Expect = 0.025
Identities = 37/135 (27%), Positives = 52/135 (38%), Gaps = 6/135 (4%)
Frame = +1
Query: 504 SGPLTSNPMP------TRPVSVDSVQMFSGPLLPTPIPQPPSSSPKVSPSASPTIVSSPK 557
S PL S P P T P S S+ + + P P P P +SP +P + +SP
Sbjct: 172 SKPLRSRPSPPPTFTPTSPSSSFSLTAHTPTISPPPPPPPAITSPSSTPPRPSSSANSPS 351
Query: 558 ISELHELPRPPTNFPSNSRLLGLVGYSGPLVPRGQKVSAPNNLVISSAASPLPIPPQAMA 617
L P PT YS P R S ++ S+ AS +P
Sbjct: 352 *LSLTPAPTSPT-----------PPYSPPSTYRRPAFSRTSSSPQSTPASSMP------- 477
Query: 618 RSFSIPSSGARVTAL 632
S ++P +R+T L
Sbjct: 478 -SSTLPVRSSRLTGL 519
>TC83532 similar to PIR|T38639|T38639 proteasome component PUP2 homolog -
fission yeast (Schizosaccharomyces pombe), partial (97%)
Length = 901
Score = 39.3 bits (90), Expect = 0.005
Identities = 51/201 (25%), Positives = 81/201 (39%), Gaps = 28/201 (13%)
Frame = +1
Query: 441 QKKHETIRDEFSSPTVRNA--QSVLKESNSNTATTRLPPPLVDGLLSSNHDYVSAYSKKI 498
Q +H T FSS V + + ++ N+ +T PP V SS + S S
Sbjct: 13 QPEHST-SSRFSSNFVHKTPPRCLWQDLNTTEESTPSPPKAV----SSRSNTPSKPSSSD 177
Query: 499 KRHAFSGPL--------------TSNPMPTRPVSVDSVQMFSGPLLPTPIPQPPSSSPKV 544
+R S P +S P++ +S + + + P P P SS P
Sbjct: 178 RRPLASQPRRASSSASRSA*RLPSSRRRPSKRLSKSTATSAAPCPVSRPTPAPWSSMPA* 357
Query: 545 SPSASPTIVSSPKISELHELPRP-PTNFPSNSRLLGLVGYSGPLVPRGQKVSAPNNL--- 600
SPS +P+ + SP S L PRP T+ +++R VP+ +K S P L
Sbjct: 358 SPSPTPSTIMSPSASSL--APRPSATSLSASAR-----------VPKARKPSCPGPLASP 498
Query: 601 --------VISSAASPLPIPP 613
++ S+ +P P+ P
Sbjct: 499 S*LRATTRMVPSSFTPSPVAP 561
>TC91356 similar to GP|20151585|gb|AAM11152.1 LD24077p {Drosophila
melanogaster}, partial (71%)
Length = 698
Score = 38.5 bits (88), Expect = 0.008
Identities = 45/165 (27%), Positives = 70/165 (42%)
Frame = +3
Query: 493 AYSKKIKRHAFSGPLTSNPMPTRPVSVDSVQMFSGPLLPTPIPQPPSSSPKVSPSASPTI 552
A S+ +R F+ P S + S S +M S P+ P S+P PS+S
Sbjct: 234 ARSRAWRRFTFT-PCPSRSTRSSTTSCPSSRMRS*RSSPSRSRPVPVSAPASRPSSSSVT 410
Query: 553 VSSPKISELHELPRPPTNFPSNSRLLGLVGYSGPLVPRGQKVSAPNNLVISSAASPLPIP 612
+ +S + RPP S LL + P + VSA + ++ SP P P
Sbjct: 411 PRAMSVS----VSRPPRK----SLLLFALPSLSPSLASFPFVSATG---VPTSVSPTPCP 557
Query: 613 PQAMARSFSIPSSGARVTALHSSSALESSHISSISEDIASPPLTP 657
P+++A + PS+ + A+ SS S +SS S +P P
Sbjct: 558 PRSLASAVPSPSASSPPPAVPVSSPPPPSSVSSSSLVSRTPTPPP 692
Score = 28.5 bits (62), Expect = 8.8
Identities = 43/181 (23%), Positives = 72/181 (39%)
Frame = +3
Query: 388 RPSLSRKFSSYVLPTPVDAKSSISSGSNNPKPSKMQTNSNEATTNLWHSSPLEQKKHETI 447
RP+ SR + + TP ++S+ SS ++ P S+M++ SSP +
Sbjct: 228 RPARSRAWRRFTF-TPCPSRSTRSSTTSCPS-SRMRS*---------RSSPSRSRPVPV- 371
Query: 448 RDEFSSPTVRNAQSVLKESNSNTATTRLPPPLVDGLLSSNHDYVSAYSKKIKRHAFSGPL 507
S+P R + S + + + +R PP LL + + + A P
Sbjct: 372 ----SAPASRPSSSSVTPRAMSVSVSR--PPRKSLLLFALPSLSPSLASFPFVSATGVPT 533
Query: 508 TSNPMPTRPVSVDSVQMFSGPLLPTPIPQPPSSSPKVSPSASPTIVSSPKISELHELPRP 567
+ +P P P S+ S +P+P P + VS P+ VSS + P P
Sbjct: 534 SVSPTPCPPRSLASA-------VPSPSASSPPPAVPVSSPPPPSSVSSSSLVSRTPTPPP 692
Query: 568 P 568
P
Sbjct: 693 P 695
>BE941260 similar to GP|9279681|dbj| gb|AAB80666.1~gene_id:MDJ14.25~similar
to unknown protein {Arabidopsis thaliana}, partial (3%)
Length = 461
Score = 38.5 bits (88), Expect = 0.008
Identities = 16/23 (69%), Positives = 21/23 (90%)
Frame = -2
Query: 44 MQDMRDCYDTLLSAAAATASSAY 66
MQ+MRDCYD+LL+AAA + +SAY
Sbjct: 448 MQEMRDCYDSLLAAAAVSENSAY 380
>TC86898 similar to GP|18376007|emb|CAB91741. probable ATP citrate lyase
subunit 2 {Neurospora crassa}, complete
Length = 2389
Score = 38.5 bits (88), Expect = 0.008
Identities = 42/143 (29%), Positives = 61/143 (42%), Gaps = 12/143 (8%)
Frame = +3
Query: 507 LTSNPMPTRPVSVDS--------VQMFSGPLL----PTPIPQPPSSSPKVSPSASPTIVS 554
LTS + RPV S V S P++ TP P PP + SP++SPT VS
Sbjct: 1491 LTSPTLMPRPVPPSSLLSSTPTAVSGLSSPVVVPPSSTPTPSPPPA----SPTSSPTTVS 1658
Query: 555 SPKISELHELPRPPTNFPSNSRLLGLVGYSGPLVPRGQKVSAPNNLVISSAASPLPIPPQ 614
+ L PP+ P+ + +L S L PR + S+ S + +P
Sbjct: 1659 T--------LVLPPSPRPTTTPVLSSTSCSALL*PRRAR----------SSLSVVVLPTS 1784
Query: 615 AMARSFSIPSSGARVTALHSSSA 637
+ + S SSG T L SS++
Sbjct: 1785 PTSPAHSRVSSGPSATTLSSSTS 1853
Score = 33.9 bits (76), Expect = 0.21
Identities = 41/151 (27%), Positives = 60/151 (39%)
Frame = +3
Query: 511 PMPTRPVSVDSVQMFSGPLLPTPIPQPPSSSPKVSPSASPTIVSSPKISELHELPRPPTN 570
P TRP ++ +V SGPL P+ PSA PT LP P
Sbjct: 1314 PSSTRPPTLSAVS--SGPLPALPL-----------PSA*PT------------LPLPTAK 1418
Query: 571 FPSNSRLLGLVGYSGPLVPRGQKVSAPNNLVISSAASPLPIPPQAMARSFSIPSSGARVT 630
++ R +S PL+ VS P + S P P+PP ++ + S+ V+
Sbjct: 1419 RSTSMRAR---RWSSPLL---SVVS*PRRRLTSPTLMPRPVPPSSL-----LSSTPTAVS 1565
Query: 631 ALHSSSALESSHISSISEDIASPPLTPIALS 661
L S + S + S ASP +P +S
Sbjct: 1566 GLSSPVVVPPSSTPTPSPPPASPTSSPTTVS 1658
>TC86766 weakly similar to PIR|T06291|T06291 extensin homolog T9E8.80 -
Arabidopsis thaliana, partial (18%)
Length = 1260
Score = 38.1 bits (87), Expect = 0.011
Identities = 30/105 (28%), Positives = 38/105 (35%)
Frame = +2
Query: 506 PLTSNPMPTRPVSVDSVQMFSGPLLPTPIPQPPSSSPKVSPSASPTIVSSPKISELHELP 565
P P P+ P + P P P P PP S PS P + +SP S ++ P
Sbjct: 320 PCVEPPPPSSPAPHQT------PYHPPPSPSPPPSPVYAYPSPPPPVYTSPPPSPVYAYP 481
Query: 566 RPPTNFPSNSRLLGLVGYSGPLVPRGQKVSAPNNLVISSAASPLP 610
PP YS P P + P IS A+ P P
Sbjct: 482 SPPPPV-----------YSSPPPPPVYEGPIPPVFGISYASPPPP 583
Score = 30.0 bits (66), Expect = 3.0
Identities = 30/102 (29%), Positives = 35/102 (33%), Gaps = 1/102 (0%)
Frame = +2
Query: 513 PTRPVSVDSVQMFSGPLLPTPIPQPPSSSPKVSPSAS-PTIVSSPKISELHELPRPPTNF 571
PT P V S P P P PP +P SP P SSP H P PP +
Sbjct: 2 PTPPYCVRSPP----PPPPNSPPPPPPPAPVFSPPPPVPYYYSSPPPPPAHSPPPPPXSP 169
Query: 572 PSNSRLLGLVGYSGPLVPRGQKVSAPNNLVISSAASPLPIPP 613
P P P +S P + S P+ PP
Sbjct: 170 PPPPH--------SPTPPVYPYLSPPPPPPVHSPPPPVYSPP 271
>TC79599 similar to GP|9757867|dbj|BAB08454.1
gb|AAD30228.1~gene_id:K9I9.2~similar to unknown protein
{Arabidopsis thaliana}, partial (23%)
Length = 1530
Score = 38.1 bits (87), Expect = 0.011
Identities = 52/219 (23%), Positives = 88/219 (39%), Gaps = 24/219 (10%)
Frame = +1
Query: 432 NLWHSSP---LEQKKHETIRDEFSSPTVRNAQS-----VLKE-----SNSNTATTRLPPP 478
NL+HS LEQ +I + T+ +A S +LK N+ + +P
Sbjct: 337 NLYHSLKRWGLEQDIKVSIAFDLDCFTLNSATSNHDLKMLKPMIEFLQTVNSTFSLIPSS 516
Query: 479 LVDGLLSSNHDYVSAYSKKIKRHAFSGPLTSNPMPT-----RPVSVDSVQMFSGPLLPTP 533
+ ++VS++ + +K+ F + T R +++ + + + P+ PTP
Sbjct: 517 KFSHFSDKSLNFVSSHLESMKKLGFFNHNNIINIATIVPKERKITIRKLSVTTIPIKPTP 696
Query: 534 IP---QPPSSSPKVSPSASPTIVSSPKISELHELPRPPTNFPSNSRLLGLVGYSGPLVPR 590
IP QPP P SP +P V +PK PL P
Sbjct: 697 IPEIAQPPLDFPAGSPYPAPYNVPNPK----------------------------PLPPL 792
Query: 591 GQKVSAP---NNLVISSAASPLPIPPQAMARSFSIPSSG 626
Q VS+P ++ + P P+PPQ ++ + S P +G
Sbjct: 793 AQIVSSPPPISSPYFAPQEQPSPLPPQFVSPANS-PQNG 906
>BQ144052 weakly similar to GP|21327989|dbj contains ESTs AU093876(E1018)
AU093877(E1018)~unknown protein, partial (11%)
Length = 536
Score = 37.7 bits (86), Expect = 0.014
Identities = 21/73 (28%), Positives = 38/73 (51%), Gaps = 8/73 (10%)
Frame = +3
Query: 509 SNPMPTRPVSVDSVQM---FSGPLLPTPIPQPPSSSPKVS-----PSASPTIVSSPKISE 560
S+P+P PV + + F+ P +P+P+P PP + +S P+ +P + P+I+
Sbjct: 201 SHPVPLLPVGLPVPSLLVAFATPPVPSPLPSPPPITFPISHSAPPPARNPLSATYPRINS 380
Query: 561 LHELPRPPTNFPS 573
+H P T P+
Sbjct: 381 IHSTGVPSTPPPT 419
>TC85985 similar to GP|5139695|dbj|BAA81686.1 expressed in cucumber
hypocotyls {Cucumis sativus}, partial (42%)
Length = 892
Score = 37.4 bits (85), Expect = 0.019
Identities = 39/150 (26%), Positives = 63/150 (42%), Gaps = 3/150 (2%)
Frame = +3
Query: 506 PLTSNPMPTRPVSVD-SVQMFSGPLLPTPIPQPPSSSPKVSPSASPTIVSSPKISELHEL 564
P+ +P + PV S P+ P P P SS P P +SP S+P ++ E+
Sbjct: 303 PVAKSPAASSPVVAPVSTPPKPAPVSSPPAPVPVSSPPTPVPVSSPPTASTPAVTPSAEV 482
Query: 565 PRPPTNFPSNSRLLGLVGYSGPLVPRGQKVS--APNNLVISSAASPLPIPPQAMARSFSI 622
P PS S+ +G+K S AP+ + A P+ P ++ S
Sbjct: 483 PAAA---PSKSK---------KKTKKGKKHSAPAPSPALEGPPAPPVGAPGPSLDASSPG 626
Query: 623 PSSGARVTALHSSSALESSHISSISEDIAS 652
P+S A + + L+ I S++ +AS
Sbjct: 627 PASAADESGAETIRCLQKV-IGSLALGLAS 713
>TC76936 similar to GP|20160782|dbj|BAB89723. putative nascent polypeptide
associated complex alpha chain {Oryza sativa (japonica
cultivar-group)}, partial (86%)
Length = 914
Score = 36.6 bits (83), Expect = 0.032
Identities = 27/86 (31%), Positives = 43/86 (49%), Gaps = 1/86 (1%)
Frame = +3
Query: 245 HHAAQLCFFKKAVKSLETVEPHVKSVTEQQHIDYHFNGLEEEDGDEGDEGYEDDDGYD-E 303
+H +Q + + +T E + + EQQ I +H + E+D DE DE EDDD D +
Sbjct: 36 YHRSQ*STSFRITMTAQTQEELLAAHLEQQKI-HHDEPVVEDDDDEDDEDDEDDDDEDDD 212
Query: 304 NDDGELSFDYGQIEQEQDVSTSRNSM 329
N +G G+ +Q + SR +M
Sbjct: 213 NAEGFEGDASGRSKQTRSEKKSRKAM 290
>TC77337 weakly similar to GP|4019275|gb|AAC95573.1| orf 48 {Ateline
herpesvirus 3}, partial (8%)
Length = 986
Score = 35.8 bits (81), Expect = 0.055
Identities = 18/47 (38%), Positives = 29/47 (61%)
Frame = +3
Query: 284 EEEDGDEGDEGYEDDDGYDENDDGELSFDYGQIEQEQDVSTSRNSME 330
EEED ++GD+ EDDD +++DD E + G+ ++E+ V N E
Sbjct: 594 EEEDDEDGDDQDEDDDEDEDDDDEE---EGGEEDEEEGVDEEDNEEE 725
Score = 31.2 bits (69), Expect = 1.4
Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 13/121 (10%)
Frame = -2
Query: 452 SSPTVRNAQSVLKESNSNTATTRLPPPLVDGLLSSNHDYVSAYSKKIKRHAFSGPLTSNP 511
+S + ++ S L S++ ++++ PP SS+ S+ S + S +S+P
Sbjct: 748 ASSSSSSSSSSLSSSSTPSSSSSSPP-------SSSSSSSSSSSSSSSWSSPSSSSSSSP 590
Query: 512 MPTRPVSVDSVQMFSGPLLPTPIPQPPSS-------------SPKVSPSASPTIVSSPKI 558
+ P + S F LL +P PP S SP S S+S ++ SSP
Sbjct: 589 FSSAPPAPPSGAFFELLLLLELLPYPPPSSDDNSSSPSPNAPSPSSSSSSSSSLPSSPSA 410
Query: 559 S 559
S
Sbjct: 409 S 407
>AW690594 similar to GP|23498163|emb hypothetical protein {Plasmodium
falciparum 3D7}, partial (10%)
Length = 633
Score = 35.8 bits (81), Expect = 0.055
Identities = 19/56 (33%), Positives = 33/56 (58%)
Frame = +3
Query: 284 EEEDGDEGDEGYEDDDGYDENDDGELSFDYGQIEQEQDVSTSRNSMELDQVELTLP 339
EE++ DE +E E+++ DE+DD E + + E+E+D E+D++ TLP
Sbjct: 111 EEDEHDEEEEEEEEEEEEDEHDDEEEEEEEEEEEEEEDDDEEGEEDEIDRIS-TLP 275
Score = 28.9 bits (63), Expect = 6.7
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 5/82 (6%)
Frame = -3
Query: 591 GQKVSAPNN-----LVISSAASPLPIPPQAMARSFSIPSSGARVTALHSSSALESSHISS 645
G+K S NN ++I S +S P + + S S SS + ++ SSS+ SS SS
Sbjct: 310 GRKESICNNSGSGRVLILSISSSSPSSSSSSSSSSSSSSSSSSSSSCSSSSSSSSSSSSS 131
Query: 646 ISEDIASPPLTPIALSNSRPSS 667
S +S + S++ PSS
Sbjct: 130 SSCSSSSSSSCSSSSSSTSPSS 65
>TC82261 similar to GP|10177249|dbj|BAB10717. contains similarity to
phytocyanin/early nodulin-like protein~gene_id:K19P17.3,
partial (7%)
Length = 740
Score = 35.8 bits (81), Expect = 0.055
Identities = 30/90 (33%), Positives = 42/90 (46%), Gaps = 1/90 (1%)
Frame = +1
Query: 531 PTPIPQPPSSSPKVSPS-ASPTIVSSPKISELHELPRPPTNFPSNSRLLGLVGYSGPLVP 589
PTP P PS SP SPS P++++SP EL P++ PS S ++ P
Sbjct: 415 PTPSPVSPSESPSNSPSFFLPSLLTSP------ELSPSPSSSPSPSPVIS---------P 549
Query: 590 RGQKVSAPNNLVISSAASPLPIPPQAMARS 619
+S P + SA SP P Q ++S
Sbjct: 550 SPTVLSTPPHSSWISAPSPAPSSNQMNSQS 639
>BI264438 similar to GP|21427467|gb actin-related protein 6 {Arabidopsis
thaliana}, partial (43%)
Length = 695
Score = 35.8 bits (81), Expect = 0.055
Identities = 28/91 (30%), Positives = 44/91 (47%)
Frame = +1
Query: 523 QMFSGPLLPTPIPQPPSSSPKVSPSASPTIVSSPKISELHELPRPPTNFPSNSRLLGLVG 582
Q S PL P P P PP+ + PSA+P+I ++ + + PT P +S L
Sbjct: 10 QTLSTPLPPPPPPPPPNKTSPPPPSAAPSIAAT*STPTSNAI-SGPTFSPLSSASTLLNP 186
Query: 583 YSGPLVPRGQKVSAPNNLVISSAASPLPIPP 613
S L P +S P N + ++++S + I P
Sbjct: 187 LSSSLNP--SSLSLPFNTLSTNSSSKISIFP 273
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.313 0.129 0.361
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,784,127
Number of Sequences: 36976
Number of extensions: 354704
Number of successful extensions: 5581
Number of sequences better than 10.0: 285
Number of HSP's better than 10.0 without gapping: 4038
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4952
length of query: 669
length of database: 9,014,727
effective HSP length: 102
effective length of query: 567
effective length of database: 5,243,175
effective search space: 2972880225
effective search space used: 2972880225
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 62 (28.5 bits)
Lotus: description of TM0117b.11