TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0114.8
         (743 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC90529 similar to GP|18086453|gb|AAL57680.1 At1g28320/F3H9_2 {A...   362  e-100
CB892557                                                              132  5e-31
TC80319 similar to GP|20259261|gb|AAM14366.1 putative HhoA prote...    43  4e-04
BQ140222 homologue to GP|14517500|gb K16N12.18/K16N12.18 {Arabid...    43  5e-04
TC87369 homologue to GP|14517500|gb|AAK62640.1 K16N12.18/K16N12....    39  0.009
TC91306 weakly similar to PIR|T06371|T06371 probable UDP-glucuro...    32  0.68
BF642570 similar to GP|13172275|gb DegP2 protease {Arabidopsis t...    31  2.0
TC88336 similar to PIR|T51477|T51477 glutamine-rich protein - Ar...    29  5.8
TC77511 similar to GP|14532760|gb|AAK64081.1 putative kinase {Ar...    29  7.5

>TC90529 similar to GP|18086453|gb|AAL57680.1 At1g28320/F3H9_2 {Arabidopsis
           thaliana}, partial (6%)
          Length = 1017

 Score =  362 bits (928), Expect = e-100
 Identities = 182/257 (70%), Positives = 201/257 (77%), Gaps = 22/257 (8%)
 Frame = +3

Query: 328 QLVIPWEAIVTASSGLLRKW------------------GKGPFVGTYKLD--VPASNTHE 367
           QLVIPWEAIV A+SGLLRKW                  GKGPF+   K +  V +SN HE
Sbjct: 195 QLVIPWEAIVNAASGLLRKWPQNTVEGSCYQEGNSCGPGKGPFIDYNKSEAYVLSSNNHE 374

Query: 368 QLNLGSSSLLPIEKAMASVCLVTIGDGVWASGILLNSQGLVLTNAHLLEPWRFGKTHVSG 427
            LN G+SS LPIEKAMASVCLVTIGDGVWASGILLNSQGL+LTNAHLLEPWRFGKTH++G
Sbjct: 375 HLNFGNSSPLPIEKAMASVCLVTIGDGVWASGILLNSQGLILTNAHLLEPWRFGKTHITG 554

Query: 428 GG--NGTNSKTLPFMLEGTTSLGNKIESDQISQTLHSKVPVHYPFAADEHGGYKLNPSYD 485
            G  NGTN +  P MLEGTTSL N+ ES Q  QTL SK+   YPF A E G YKLN  YD
Sbjct: 555 RGYGNGTNPEKFPSMLEGTTSLDNRGESIQTRQTLPSKMTNLYPFVAGEQGRYKLNKPYD 734

Query: 486 NHRNIRIRLDHIKPWVWCDAKVVYICKGPWDVALLQIESIPDNLVPMVMNFSRPSTGSKA 545
           +HRNIRIRLDHIKPWVWCDAKVVY+CKGPWDVALLQ+E +PDNL+P++ NFSRPSTGSKA
Sbjct: 735 SHRNIRIRLDHIKPWVWCDAKVVYVCKGPWDVALLQLEPVPDNLLPILTNFSRPSTGSKA 914

Query: 546 YVIGHGLFGPKCGFFPS 562
           YVIGHGLFGPKCG  P+
Sbjct: 915 YVIGHGLFGPKCGM*PN 965


>CB892557 
          Length = 300

 Score =  132 bits (332), Expect = 5e-31
 Identities = 66/81 (81%), Positives = 71/81 (87%), Gaps = 1/81 (1%)
 Frame = +1

Query: 276 NSYPPNSSDGSLLM-ADIRTLPGMEGSPVFSEHACLTGVLIRPLRQKTSGVETQLVIPWE 334
           N YPPNSSDGSLLM ADIR+LPGMEGSPVFSEHACLTGVLIRPLRQ+TSG E QLVIPWE
Sbjct: 22  NCYPPNSSDGSLLMMADIRSLPGMEGSPVFSEHACLTGVLIRPLRQQTSGAEIQLVIPWE 201

Query: 335 AIVTASSGLLRKWGKGPFVGT 355
           AIV A+SGLLRKW +    G+
Sbjct: 202 AIVNAASGLLRKWPQNTVEGS 264


>TC80319 similar to GP|20259261|gb|AAM14366.1 putative HhoA protease
           precursor {Arabidopsis thaliana}, partial (47%)
          Length = 1195

 Score = 43.1 bits (100), Expect = 4e-04
 Identities = 21/59 (35%), Positives = 34/59 (57%)
 Frame = +2

Query: 590 TNGNFPAMLETTAAVHPGASGGAVINSDGHMIGLVTSNARHSGGAVIPHLNFSIPSAAL 648
           T G     ++T AA++ G SGG +I+S GH++G+ T+     G      +NF+IP  A+
Sbjct: 803 TEGLSKEAIQTDAAINAGNSGGPLIDSHGHVVGVNTATFTRKGTGASSGVNFAIPIDAV 979


>BQ140222 homologue to GP|14517500|gb K16N12.18/K16N12.18 {Arabidopsis
           thaliana}, partial (23%)
          Length = 307

 Score = 42.7 bits (99), Expect = 5e-04
 Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 1/114 (0%)
 Frame = +1

Query: 522 IESIPDNLVPMVMNFSRPS-TGSKAYVIGHGLFGPKCGFFPSVCSGVIAKVVEAKTTQSY 580
           +++  D L P+ +  S     G K Y IG+  FG        V SG+  ++  A T +  
Sbjct: 1   VDAPKDKLRPIPVGVSADLLVGXKVYAIGNP-FGLDHTLTTGVISGLRREIXSAATGRPI 177

Query: 581 QSIQAEHMHTNGNFPAMLETTAAVHPGASGGAVINSDGHMIGLVTSNARHSGGA 634
           Q +              ++T AA++PG SGG +++S G++IG+ T     SG +
Sbjct: 178 QDV--------------IQTDAAINPGNSGGPLLDSSGNLIGINTXIYSPSGAS 297


>TC87369 homologue to GP|14517500|gb|AAK62640.1 K16N12.18/K16N12.18
           {Arabidopsis thaliana}, partial (42%)
          Length = 1210

 Score = 38.5 bits (88), Expect = 0.009
 Identities = 19/48 (39%), Positives = 33/48 (68%)
 Frame = +2

Query: 597 MLETTAAVHPGASGGAVINSDGHMIGLVTSNARHSGGAVIPHLNFSIP 644
           +++T AA++PG SGG +++S G++IG+ T+    SG +    + FSIP
Sbjct: 455 VIQTDAAINPGNSGGPLLDSSGNLIGINTAIYSPSGAS--SGVGFSIP 592


>TC91306 weakly similar to PIR|T06371|T06371 probable
           UDP-glucuronosyltransferase (EC 2.4.1.-) - garden pea,
           partial (31%)
          Length = 724

 Score = 32.3 bits (72), Expect = 0.68
 Identities = 14/29 (48%), Positives = 18/29 (61%)
 Frame = +2

Query: 127 RPDLISGVRIDIMTEETNEKSDHGLTPGW 155
           RPDL+ G  + + +E  NE SD GL  GW
Sbjct: 59  RPDLVIGGSVVLSSEFVNEISDRGLIAGW 145


>BF642570 similar to GP|13172275|gb DegP2 protease {Arabidopsis thaliana},
           partial (29%)
          Length = 607

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 35/135 (25%), Positives = 55/135 (39%), Gaps = 1/135 (0%)
 Frame = +2

Query: 516 DVALLQIESIPDNLVPMVMNFSR-PSTGSKAYVIGHGLFGPKCGFFPSVCSGVIAKVVEA 574
           D+ALL +ES         + F   P       V+G+    P  G   SV  GV+++V   
Sbjct: 155 DLALLSVESEEFWRDVEPLRFGHLPHLQDSVTVVGY----PFGGDTISVTKGVVSRV--- 313

Query: 575 KTTQSYQSIQAEHMHTNGNFPAMLETTAAVHPGASGGAVINSDGHMIGLVTSNARHSGGA 634
               SY    +E +         ++  AA++PG SGG   N  G  IG+     R     
Sbjct: 314 -EVTSYAHGSSELLG--------IQIDAAINPGNSGGPAFNDQGECIGVAFXVYRSEDA- 463

Query: 635 VIPHLNFSIPSAALA 649
              ++ + IPS  ++
Sbjct: 464 --ENIGYVIPSTVVS 502


>TC88336 similar to PIR|T51477|T51477 glutamine-rich protein - Arabidopsis
            thaliana, partial (67%)
          Length = 1297

 Score = 29.3 bits (64), Expect = 5.8
 Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 5/59 (8%)
 Frame = +2

Query: 158  AQLLSLFDIPASALGVQS----LIEASLGFSEH-EWEIGWSLASSSNDSKPSRDFLQTQ 211
            A+++S   I  SALG Q     ++   +G  +H E   GW   +  ++ +PS DFL  +
Sbjct: 989  AEMMSRAPIRGSALGSQGSDIGIVGHDMGDQDHGEMMNGWGNNAQRDEKEPSEDFLNDE 1165


>TC77511 similar to GP|14532760|gb|AAK64081.1 putative kinase {Arabidopsis
           thaliana}, partial (58%)
          Length = 1348

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 36/140 (25%), Positives = 59/140 (41%), Gaps = 5/140 (3%)
 Frame = +3

Query: 578 QSYQSIQAEHMHTNGNFPAMLETTAAVHPGASGGAVINSDGHMIGLVTSNARHSGGAVIP 637
           QSY       M   G   A L +   + PGAS    I     +IG  T+++   G  +  
Sbjct: 393 QSYIYSSKVDMWAMGAIMAELFSLRPLFPGASEADEIYKICGVIGNPTTDSWADGLKLAR 572

Query: 638 HLNFSIPSAA---LAPIFKFAEDMKDLSLLQILD--EPNEYLSSIWALMRPSYPKLHSVP 692
            +N+  P  A   L+ +   A D   +SL+Q L   +P +  ++  AL  P +     +P
Sbjct: 573 DINYQFPQLAGVNLSALIPSASD-HAISLIQSLCSWDPCKRPTASEALQHPFFQSCFYIP 749

Query: 693 GSPQSLVDKKSKEEKGSRFA 712
            S +S    ++    G+R A
Sbjct: 750 PSLRSRAVARTPPPAGTRGA 809


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.317    0.135    0.403 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,260,718
Number of Sequences: 36976
Number of extensions: 342247
Number of successful extensions: 1529
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1520
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1526
length of query: 743
length of database: 9,014,727
effective HSP length: 103
effective length of query: 640
effective length of database: 5,206,199
effective search space: 3331967360
effective search space used: 3331967360
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)