Lotus
BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0112.15
         (994 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC79804 weakly similar to GP|6175165|gb|AAF04891.1| Mutator-like...   207  1e-53
BG451959 homologue to GP|6175165|gb| Mutator-like transposase {A...   106  5e-23
BF646328 similar to PIR|F84533|F845 Mutator-like transposase [im...    80  3e-15
CB891859 similar to GP|6175165|gb| Mutator-like transposase {Ara...    73  6e-13
BI271388 similar to GP|10177186|db mutator-like transposase-like...    71  2e-12
BG586356 similar to GP|9759134|dbj mutator-like transposase-like...    57  5e-08
AL375901 similar to GP|9759134|dbj mutator-like transposase-like...    50  3e-06
AL375902 similar to GP|9759134|dbj mutator-like transposase-like...    41  0.002
TC80981 similar to GP|8698730|gb|AAF78488.1| ESTs gb|Z18526  gb|...    39  0.013
BE239532                                                               34  0.24
TC89427 weakly similar to GP|4557063|gb|AAD22502.1| expressed pr...    33  0.71
TC78566 similar to GP|20466388|gb|AAM20511.1 putative chloroplas...    33  0.71
TC76514 homologue to PIR|T09648|T09648 nucleolin homolog nuM1 - ...    33  0.71
TC81158 similar to GP|9280664|gb|AAF86533.1| F21B7.15 {Arabidops...    33  0.71
TC80893 similar to GP|4557063|gb|AAD22502.1| expressed protein {...    33  0.71
TC80072 similar to GP|14423520|gb|AAK62442.1 Unknown protein {Ar...    32  0.92
AW687028 weakly similar to GP|9909176|dbj| hypothetical protein~...    32  0.92
TC77337 weakly similar to GP|4019275|gb|AAC95573.1| orf 48 {Atel...    32  1.2
BF005355 similar to GP|9758230|dbj| emb|CAB61996.1~gene_id:MZF18...    31  2.7
TC92765 similar to EGAD|119550|127787 hypothetical protein F49E1...    31  2.7

>TC79804 weakly similar to GP|6175165|gb|AAF04891.1| Mutator-like
           transposase {Arabidopsis thaliana}, partial (57%)
          Length = 2129

 Score =  207 bits (528), Expect = 1e-53
 Identities = 146/518 (28%), Positives = 241/518 (46%), Gaps = 5/518 (0%)
 Frame = +1

Query: 304 EEVKFQVGHTFSSKDLFKQAVKDYALQQKKDLTFKKDDKKRCVVICVA-GCPFYLRLSKT 362
           E+  F VG  F     F+ A+K+ A+ Q  +L   K D  R    C + GCP+ +R  K 
Sbjct: 163 EDHNFVVGQEFPDVKAFRNAIKEAAIAQHFELRIIKSDLIRYFAKCASEGCPWRIRAVKL 342

Query: 363 DSRSYWLLVSLEADHTCCRSASN--RQAKTKYLARKFMPIIRHTPNITVNALIEEARLRW 420
            + S + + SLE  HTC R+A N   QA   ++       +R   N     ++ +   ++
Sbjct: 343 PNASTFTIRSLEGTHTCGRNALNGHHQASVDWIVSFIEERLRDNINYKPKDILHDIHKQY 522

Query: 421 GILLGKWKAYRAKVKAVEMIQGETLDQYANLRKYAAELLRSNPGSTVIIKSTKGAKGPVF 480
           GI +   +A+RAK + +  I G + + +  L  +  E+ ++NPGS   + +T GA    F
Sbjct: 523 GITIPYKQAWRAKERGLAAIYGSSEEGFYLLPSFCEEIKKTNPGSVAKVFTT-GADSR-F 696

Query: 481 ERIYVCFAATKTAFATTCRPLIGLDGCFLKGMYGGQLLAAVGKDGNNQMFPIAFAVVEAE 540
           +R+++ F A+   F   C P++ L G  LK  Y    L+A   D +  +FP+AFAVV+ E
Sbjct: 697 QRLFISFYASIHGFVNGCLPIVALGGIQLKSKYLSTFLSATSFDADGGLFPLAFAVVDVE 876

Query: 541 TKASWSWFVDLLVNDLDMVER--KRWAFISDQQKVMLN*SCIH*SIIHLYY*I*YLSYLY 598
              SW+WF+  L N L++      +  F+SD QK                          
Sbjct: 877 NDESWTWFLSELHNALEVNTECMPQIIFLSDGQK-------------------------- 978

Query: 599 SCVMQGLVPTLAELVGDVEHRLCIKHLYGNFRKKYPGAEMKQALWRAARASTLPEWYAAM 658
                G+V  +        H  C++HL  N  K++  + +   LW AA A+T+  +   M
Sbjct: 979 -----GIVDAIRRKFPRSSHAFCMRHLSENIGKEFKNSRLIHLLWSAAYATTINAFREKM 1143

Query: 659 EVMKELNEAAFQDMMNLPPKMWTRSAYSRDTQCDLQVNNMCEAFNRAILEYRDKPIITLL 718
             ++E++  A   + +  P  W    +       L  N   E FN+ ILE ++ PII ++
Sbjct: 1144AEIEEVSPNASMWLQHFHPSQWALVYFEGTRYGHLSSN--IEEFNKWILEAQELPIIQVI 1317

Query: 719 ERLKFYLNNRIVKQKQLMLRWRTALCPMIQQKLEDSKRNSDKWFANWMGDEYMSLFEVSR 778
           ER++  L      ++     W + L P  ++++ ++  N    +     DE    FEV  
Sbjct: 1318ERIQSKLKTEFDDRRLKSSSWCSVLTPSSERRMVEAI-NRASTYQVLKSDEVE--FEVIS 1488

Query: 779 DNEKYSVNLESRSCACRRWDLSGIPCAHAVASMWFGRR 816
            +    VN+ S SC+CR W L GIPC+HAVA++   R+
Sbjct: 1489ADRSDIVNIGSHSCSCRDWQLYGIPCSHAVAALISSRK 1602


>BG451959 homologue to GP|6175165|gb| Mutator-like transposase {Arabidopsis
           thaliana}, partial (28%)
          Length = 658

 Score =  106 bits (264), Expect = 5e-23
 Identities = 68/233 (29%), Positives = 103/233 (44%), Gaps = 2/233 (0%)
 Frame = +2

Query: 401 IRHTPNITVNALIEEARLRWGILLGKWKAYRAKVKAVEMIQGETLDQYANLRKYAAELLR 460
           +   PN     ++EE     GI L   +A+R K   +  ++G   + Y  L +Y A + R
Sbjct: 56  LNENPNCKPKEILEEIHRVHGITLSYKQAWRGKEHIMAAMRGSFEEGYRLLPQYCAHVKR 235

Query: 461 SNPGSTVIIKSTKGAKGPVFERIYVCFAATKTAFATTCRPLIGLDGCFLKGMYGGQLLAA 520
           +NPGS   +          F+R+++ F A+       CRPL+GLD  +LK  Y G LL A
Sbjct: 236 TNPGSIASVYGNPSDN--CFQRLFISFQASIYGLLNACRPLLGLDRIYLKSKYLGTLLLA 409

Query: 521 VGKDGNNQMFPIAFAVVEAETKASWSWFVDLLVN--DLDMVERKRWAFISDQQKVMLN*S 578
            G DG+  +FP+AF VV+ E   +W WF+  L N  +++     R   +SD+Q       
Sbjct: 410 TGFDGDGALFPLAFGVVDEENDDNWMWFLSKLHNLLEINTENMPRLTILSDRQ------- 568

Query: 579 CIH*SIIHLYY*I*YLSYLYSCVMQGLVPTLAELVGDVEHRLCIKHLYGNFRK 631
                                   QG+V  +        H  C++HL  NFRK
Sbjct: 569 ------------------------QGIVDGVEANFPTAFHGFCMRHLSDNFRK 655


>BF646328 similar to PIR|F84533|F845 Mutator-like transposase [imported] -
           Arabidopsis thaliana, partial (3%)
          Length = 636

 Score = 80.5 bits (197), Expect = 3e-15
 Identities = 52/158 (32%), Positives = 77/158 (47%), Gaps = 3/158 (1%)
 Frame = -1

Query: 710 RDKPIITLLERLKFYLNNRIVKQKQLM--LRWRTALCPMIQQKLEDSKRNSDK-WFANWM 766
           R+KP+I LLE  +   N    + K     ++W            +  K+ S + W A W 
Sbjct: 630 REKPVIXLLEGYQALYNCEDCQAKADA*KVQW*DM---SKDSSFD*EKQKSCRGWKATWH 460

Query: 767 GDEYMSLFEVSRDNEKYSVNLESRSCACRRWDLSGIPCAHAVASMWFGRRVPEDYVHSSY 826
           GD  M+ F VS +  KY VNL  R+CACR+W+L+GIPCAH +  +W      E++V S Y
Sbjct: 459 GDMEMNNFNVSNETNKYIVNLAQRTCACRKWNLTGIPCAHVIPCIWHNGLADENFVSSYY 280

Query: 827 RHLLIHTPTSSYLIMDLSYGLKFQLLH*THLT*GELRV 864
           R   +    S+  I+   Y   + L+   +L  G   V
Sbjct: 279 R*CSV----STIFILSKMYFYAYMLIWYQYLVAGNHNV 178


>CB891859 similar to GP|6175165|gb| Mutator-like transposase {Arabidopsis
           thaliana}, partial (27%)
          Length = 625

 Score = 72.8 bits (177), Expect = 6e-13
 Identities = 46/193 (23%), Positives = 92/193 (46%)
 Frame = +1

Query: 603 QGLVPTLAELVGDVEHRLCIKHLYGNFRKKYPGAEMKQALWRAARASTLPEWYAAMEVMK 662
           QG+V  +        H  C++HL  +FRK++    +   LW AA   T+ E+   +  ++
Sbjct: 58  QGIVDGVEANFPTAFHGFCMRHLSDSFRKEFNNTMLVNLLWEAANCLTIIEFEGKVMEIE 237

Query: 663 ELNEAAFQDMMNLPPKMWTRSAYSRDTQCDLQVNNMCEAFNRAILEYRDKPIITLLERLK 722
           E+++ A   +  +PP++W  +AY    +      N+ EA N  ILE    PII ++E ++
Sbjct: 238 EISQDAAYWIRRVPPRLWA-TAYFEGHRFGHLTANIVEALNSWILEASGLPIIQMMECIR 414

Query: 723 FYLNNRIVKQKQLMLRWRTALCPMIQQKLEDSKRNSDKWFANWMGDEYMSLFEVSRDNEK 782
             L     ++++  ++W + L P  ++ + ++   +  +      +   + FEV      
Sbjct: 415 RQLMTWFNERRETSMQWTSILVPSAERSVAEALERARTYQVLRANE---AEFEVISHEGT 585

Query: 783 YSVNLESRSCACR 795
             V++ +R C CR
Sbjct: 586 NIVDIRNRCCLCR 624


>BI271388 similar to GP|10177186|db mutator-like transposase-like protein
           {Arabidopsis thaliana}, partial (26%)
          Length = 711

 Score = 71.2 bits (173), Expect = 2e-12
 Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 3/186 (1%)
 Frame = +2

Query: 296 RFKAVQDGEEVKFQVGHTFSSKDLFKQAVKDYALQQKKDLTFKKDDKKRCVVICVA-GCP 354
           R +A Q  E     V   F+S   F++A+  Y++       +KK+D  R  V C + GCP
Sbjct: 95  RQRAAQQWENTITGVDQRFNSFSEFREALHKYSIAHGFAYRYKKNDSHRVTVKCKSQGCP 274

Query: 355 FYLRLSKTDSRSYWLLVSLEADHTCCRSA--SNRQAKTKYLARKFMPIIRHTPNITVNAL 412
           + +  SK  +     +  +  DHTC  SA  +  +A   ++       ++ +PN     +
Sbjct: 275 WRIYASKLSTTQLICIKKMTRDHTCEGSAVKAGYRATRGWVGNIIKEKLKASPNYRPKDI 454

Query: 413 IEEARLRWGILLGKWKAYRAKVKAVEMIQGETLDQYANLRKYAAELLRSNPGSTVIIKST 472
            ++ +  +GI L   +A+RAK  A E +QG   + Y  L  +  ++  +NPG    I   
Sbjct: 455 ADDIKREYGIQLNYSQAWRAKEIAREQLQGSYKEAYTQLPFFCEKIKETNPGEFCNIHDK 634

Query: 473 KGAKGP 478
           +  K P
Sbjct: 635 RXLKFP 652


>BG586356 similar to GP|9759134|dbj mutator-like transposase-like protein
           {Arabidopsis thaliana}, partial (20%)
          Length = 696

 Score = 56.6 bits (135), Expect = 5e-08
 Identities = 31/116 (26%), Positives = 59/116 (50%), Gaps = 3/116 (2%)
 Frame = +3

Query: 310 VGHTFSSKDLFKQAVKDYALQQKKDLTFKKDDKKRCVVICVA-GCPFYLRLSKTDSRSYW 368
           +G  F   +  ++ +KD A+    DL   K D+ R +  C   GCP+ + ++K      +
Sbjct: 333 IGQEFPDVETCRRTLKDIAIAMHFDLRIVKSDRSRFIAKCSKEGCPWRVHVAKCPGVPTF 512

Query: 369 LLVSLEADHTC--CRSASNRQAKTKYLARKFMPIIRHTPNITVNALIEEARLRWGI 422
            + +L+ADHTC   R+  ++QA   ++AR     IR  P +    ++++ R + G+
Sbjct: 513 TIRTLQADHTCEGVRNLHHQQASVGWVARSVESRIRDNPQVKPREILQDIRDQHGV 680


>AL375901 similar to GP|9759134|dbj mutator-like transposase-like protein
           {Arabidopsis thaliana}, partial (27%)
          Length = 493

 Score = 50.4 bits (119), Expect = 3e-06
 Identities = 25/137 (18%), Positives = 63/137 (45%)
 Frame = +3

Query: 618 HRLCIKHLYGNFRKKYPGAEMKQALWRAARASTLPEWYAAMEVMKELNEAAFQDMMNLPP 677
           H  C++++  NFR  +   ++    W A  A T  E+ + +  M E+++       + PP
Sbjct: 24  HGFCLRYVSENFRDTFKNTKLVNIFWNAVYALTAAEFESKITEMIEVSQDVISWFQHFPP 203

Query: 678 KMWTRSAYSRDTQCDLQVNNMCEAFNRAILEYRDKPIITLLERLKFYLNNRIVKQKQLML 737
            +W   AY    +       + E      LE  + P++ ++E ++  + +    ++++ +
Sbjct: 204 FLWA-VAYFDGVRYGHFTLGVTELLYNWALECHELPVVQMMEYIRQQMTSWFNDRREVGM 380

Query: 738 RWRTALCPMIQQKLEDS 754
            W + L P  ++++ ++
Sbjct: 381 EWTSILVPSAEKRISEA 431


>AL375902 similar to GP|9759134|dbj mutator-like transposase-like protein
           {Arabidopsis thaliana}, partial (20%)
          Length = 542

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 15/23 (65%), Positives = 18/23 (78%)
 Frame = +2

Query: 789 SRSCACRRWDLSGIPCAHAVASM 811
           SR C+CRRW L G PCAHA A++
Sbjct: 5   SRECSCRRWQLYGYPCAHAAAAL 73


>TC80981 similar to GP|8698730|gb|AAF78488.1| ESTs gb|Z18526  gb|AI994480
           gb|T44186  gb|Z30806 come from this gene. {Arabidopsis
           thaliana}, partial (37%)
          Length = 699

 Score = 38.5 bits (88), Expect = 0.013
 Identities = 48/163 (29%), Positives = 63/163 (38%)
 Frame = +3

Query: 127 PVNDAPNSPEVVHEVPNSAPVNDALNSSSALVHEVPNSAPVNDALNSSSALVHEVPNSAP 186
           P    P+  E  H +PN  P    L S++ +  E      VN   +SS A    VPN   
Sbjct: 93  PTKRKPDQEET-HHLPNKNP---KLTSTTTVDQETELPTTVN---SSSDA----VPN--- 230

Query: 187 VNEPLNESEDESYIPGSDEYEGESEDVSVDDSDYEENWDWAEVLPAESLINIATADRDPP 246
            NEP N ++D+                  +D + EEN D   V+           DR   
Sbjct: 231 -NEPENNTDDDD-----------------EDDEDEENSDEEPVV-----------DRKGK 323

Query: 247 FVQGSVDVGNGARIEEPATFSDFEDEDGDSSDLDSPSDDEEEG 289
            +    D G G  IEE       EDED D SD    SDD+ +G
Sbjct: 324 GIMRD-DKGKGKMIEE-------EDEDDDDSDDSDDSDDDSDG 428


>BE239532 
          Length = 645

 Score = 34.3 bits (77), Expect = 0.24
 Identities = 17/50 (34%), Positives = 31/50 (62%), Gaps = 6/50 (12%)
 Frame = +3

Query: 778 RDNEKYSVNLESRS----CACRRWDLSGIPCAHA--VASMWFGRRVPEDY 821
           + N+KY+V  +S +    C+CR++D  GI C+HA  + ++    R+P+ Y
Sbjct: 186 KPNKKYAVTFDSSNMKINCSCRKFDSMGILCSHALRIYNIKGILRIPDQY 335


>TC89427 weakly similar to GP|4557063|gb|AAD22502.1| expressed protein
           {Arabidopsis thaliana}, partial (50%)
          Length = 753

 Score = 32.7 bits (73), Expect = 0.71
 Identities = 28/111 (25%), Positives = 46/111 (41%)
 Frame = +1

Query: 188 NEPLNESEDESYIPGSDEYEGESEDVSVDDSDYEENWDWAEVLPAESLINIATADRDPPF 247
           N    E++D S     D+ E + +DV+ +D D +E++   E             D D   
Sbjct: 271 NHTCEENKDGSETEDDDD-EDDDDDVNDEDDDNDEDFSGDE------------DDEDADP 411

Query: 248 VQGSVDVGNGARIEEPATFSDFEDEDGDSSDLDSPSDDEEEGRSKRLPRFK 298
               V  G G   ++     D +D+D D+ D +   +DEEE   +  P  K
Sbjct: 412 EDDPVPNGAGGSDDDD---EDDDDDDDDNDDGEDEDEDEEEDDDEDQPPSK 555


>TC78566 similar to GP|20466388|gb|AAM20511.1 putative chloroplast outer
           membrane protein {Arabidopsis thaliana}, partial (46%)
          Length = 2245

 Score = 32.7 bits (73), Expect = 0.71
 Identities = 23/75 (30%), Positives = 32/75 (42%)
 Frame = +3

Query: 269 FEDEDGDSSDLDSPSDDEEEGRSKRLPRFKAVQDGEEVKFQVGHTFSSKDLFKQAVKDYA 328
           F DED  + DLD PSD  +E     LP FK +   +          +  D  +   K   
Sbjct: 615 FSDEDSLNDDLDEPSDSGDETDPDDLPPFKPLTKAQIRNLSRAQKKAYLDEVEYREK--- 785

Query: 329 LQQKKDLTFKKDDKK 343
           L  KK L ++K  +K
Sbjct: 786 LFMKKQLKYEKKQRK 830


>TC76514 homologue to PIR|T09648|T09648 nucleolin homolog nuM1 - alfalfa,
           partial (61%)
          Length = 1288

 Score = 32.7 bits (73), Expect = 0.71
 Identities = 51/220 (23%), Positives = 82/220 (37%), Gaps = 8/220 (3%)
 Frame = +3

Query: 94  VYVEHDSEPEKARESDGDVEIVERSVNDAPNSAPVNDAPNS-PEVVHEVPNSAPVNDALN 152
           V  + +S  E++ ES+ +  +V+         A   +   + PE   E  +S       +
Sbjct: 273 VVKKEESSSEESSESEDEQPVVKAPAPSKKTPAKKGNVKKAQPETTSEESDS-------D 431

Query: 153 SSSALVHEVPNSAPVNDALNSSSALVHEVPNSAPVNEPLNESEDESYIPG-----SDEYE 207
           SSS+   EV    PV+ A+ S +             E   ES DE   P      S    
Sbjct: 432 SSSSDEEEVKK--PVSKAVPSKNGSAPAKKVDTSEEEDSEESSDEDKKPAAKAVPSKNGS 605

Query: 208 GESEDVSVDDSDYEENWDWAEVLPAESLINIATADRDPPFVQGSVDVGNGARIEEPATFS 267
             ++  + D+ D +E+ D       E   +   A +  P   GSV          PA  +
Sbjct: 606 APAKKAASDEEDTDESSD-------EDEEDEKPAAKAVPSKNGSV----------PAKKA 734

Query: 268 DFE--DEDGDSSDLDSPSDDEEEGRSKRLPRFKAVQDGEE 305
           D E  DED +SSD +      +  ++   P  KA    +E
Sbjct: 735 DTESSDEDSESSDEEDKKPAAKASKNVSAPTKKAASSSDE 854


>TC81158 similar to GP|9280664|gb|AAF86533.1| F21B7.15 {Arabidopsis
           thaliana}, partial (6%)
          Length = 890

 Score = 32.7 bits (73), Expect = 0.71
 Identities = 24/73 (32%), Positives = 33/73 (44%), Gaps = 12/73 (16%)
 Frame = +1

Query: 230 LPAESLINIATADRDPPFVQ--GSVDVGNGARIEEPATFSDFEDEDGDSSDLDSPSD--- 284
           +P E  +   T   DPP V+  G+ D  +G+  E  +  S+ E E   SS   S SD   
Sbjct: 331 IPIEKSVERITLTGDPPSVEVNGNEDKDDGSEGESESESSESESESSTSSSSTSGSDSDE 510

Query: 285 -------DEEEGR 290
                  DEEEG+
Sbjct: 511 DDEDDAEDEEEGQ 549


>TC80893 similar to GP|4557063|gb|AAD22502.1| expressed protein {Arabidopsis
           thaliana}, partial (39%)
          Length = 883

 Score = 32.7 bits (73), Expect = 0.71
 Identities = 27/132 (20%), Positives = 52/132 (38%)
 Frame = +3

Query: 157 LVHEVPNSAPVNDALNSSSALVHEVPNSAPVNEPLNESEDESYIPGSDEYEGESEDVSVD 216
           L++   + AP   A++S   L H +       E  +++ED+      D+ + E +D   +
Sbjct: 210 LINAANSVAPKLTAMDSRFPLEHLLGRKPAYKENKSDTEDDEDDDDDDDVQDEDDDGEEE 389

Query: 217 DSDYEENWDWAEVLPAESLINIATADRDPPFVQGSVDVGNGARIEEPATFSDFEDEDGDS 276
           D   +E  +  +               D P   G+    +G          + +D+DGD 
Sbjct: 390 DYSGDEGEEEGD-------------PEDDPEANGAGGSDDG----------EDDDDDGDE 500

Query: 277 SDLDSPSDDEEE 288
            D +   D+E+E
Sbjct: 501 EDEEDGEDEEDE 536


>TC80072 similar to GP|14423520|gb|AAK62442.1 Unknown protein {Arabidopsis
           thaliana}, partial (17%)
          Length = 746

 Score = 32.3 bits (72), Expect = 0.92
 Identities = 25/103 (24%), Positives = 43/103 (41%), Gaps = 3/103 (2%)
 Frame = +1

Query: 193 ESEDESYIPGSDEYEGESEDVSVDDSDYEENWDWAEVLPAESLINIATADRD---PPFVQ 249
           + +D +     D Y   +ED+  +   + +  D   ++P +   + A +D D   P F  
Sbjct: 301 KKKDATTTSRRDRYNFSAEDMDDEIDIFHKQRD---IVPLDINADSAESDEDDEMPIFND 471

Query: 250 GSVDVGNGARIEEPATFSDFEDEDGDSSDLDSPSDDEEEGRSK 292
             +D             +D  DEDGD  + D   DDE +G+ K
Sbjct: 472 KDID-------------NDETDEDGDEEEDDDDEDDEYDGKEK 561


>AW687028 weakly similar to GP|9909176|dbj| hypothetical protein~similar to
           Arabidopsis thaliana F20D10.300, partial (11%)
          Length = 662

 Score = 32.3 bits (72), Expect = 0.92
 Identities = 26/106 (24%), Positives = 47/106 (43%), Gaps = 5/106 (4%)
 Frame = +1

Query: 609 LAELVGDVEHRLCIKHLYGNFR---KKYPGAE-MKQALWRAARASTLPEWYAAMEVMKEL 664
           + ++  D  HRLC  HL+ N +   KK P  E  ++A++         ++++ +    EL
Sbjct: 229 IKQVFPDASHRLCAWHLHKNAQENIKKTPFLEGFRKAMYSNFTPEQFEDFWSELIQKNEL 408

Query: 665 NEAAFQDMMNLPPKMWTRSAYSRDTQCD-LQVNNMCEAFNRAILEY 709
              A+         +W  +AY RD     ++  + CEA N  +  Y
Sbjct: 409 EGNAWVIKTYANKSLWA-TAYLRDKFFGRIRTTSQCEAINAIVKTY 543


>TC77337 weakly similar to GP|4019275|gb|AAC95573.1| orf 48 {Ateline
           herpesvirus 3}, partial (8%)
          Length = 986

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 35/119 (29%), Positives = 45/119 (37%), Gaps = 5/119 (4%)
 Frame = +3

Query: 192 NESEDESYIPGSDEY-EGESEDVSVDDSDYEENWDWAEVLPAESLINIATADRDPPFVQG 250
           N+ EDE    G   + EGE E  S D   Y  N +           N + + + P    G
Sbjct: 429 NDDEDEEDDDGDGAFGEGEDELSSEDGGGYGNNSN-----------NKSNSKKAPEGGAG 575

Query: 251 SVDVGNGARIEEPATFSDFEDEDGD----SSDLDSPSDDEEEGRSKRLPRFKAVQDGEE 305
             D  NG          + +DEDGD      D D   DDEEEG  +        +D EE
Sbjct: 576 GADE-NG---------EEEDDEDGDDQDEDDDEDEDDDDEEEGGEEDEEEGVDEEDNEE 722


>BF005355 similar to GP|9758230|dbj| emb|CAB61996.1~gene_id:MZF18.6~strong
           similarity to unknown protein {Arabidopsis thaliana},
           partial (8%)
          Length = 582

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 16/47 (34%), Positives = 27/47 (57%)
 Frame = +1

Query: 183 NSAPVNEPLNESEDESYIPGSDEYEGESEDVSVDDSDYEENWDWAEV 229
           + + V + +NE+EDE+    S+     S+D  +DD D E   DWA++
Sbjct: 214 DDSDVEDDVNENEDENEDYDSEWLAVLSDDDELDDDDDEALADWAKL 354


>TC92765 similar to EGAD|119550|127787 hypothetical protein F49E11.11
           {Caenorhabditis elegans}, partial (11%)
          Length = 972

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 18/66 (27%), Positives = 30/66 (45%)
 Frame = +1

Query: 261 EEPATFSDFEDEDGDSSDLDSPSDDEEEGRSKRLPRFKAVQDGEEVKFQVGHTFSSKDLF 320
           EE    +D EDE+ D  D+D+   + +  R + +    ++ DG  +   VG      D  
Sbjct: 574 EEVGNVTDLEDEENDPVDIDNYRVESKSSRVEVVQIPYSLTDGVAIVGLVGDVVDGNDEG 753

Query: 321 KQAVKD 326
           KQ  +D
Sbjct: 754 KQPTQD 771


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.326    0.139    0.435 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,524,659
Number of Sequences: 36976
Number of extensions: 434493
Number of successful extensions: 3002
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 2167
Number of HSP's successfully gapped in prelim test: 104
Number of HSP's that attempted gapping in prelim test: 649
Number of HSP's gapped (non-prelim): 2432
length of query: 994
length of database: 9,014,727
effective HSP length: 106
effective length of query: 888
effective length of database: 5,095,271
effective search space: 4524600648
effective search space used: 4524600648
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 63 (28.9 bits)


Lotus: description of TM0112.15