BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0112.1
(547 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC77151 similar to PIR|T10241|T10241 hypothetical protein T11I11... 915 0.0
TC93786 similar to PIR|F84542|F84542 nodulin-like protein [impor... 201 5e-52
BM815643 similar to PIR|T10241|T10 hypothetical protein T11I11.1... 193 2e-49
TC79657 similar to PIR|T02581|T02581 nodulin-like protein [impor... 177 7e-45
TC88989 weakly similar to PIR|C96837|C96837 nodulin-like protein... 172 3e-43
TC89576 similar to PIR|T02581|T02581 nodulin-like protein [impor... 149 4e-36
TC89586 similar to PIR|C96837|C96837 nodulin-like protein 38383... 137 8e-33
AJ502488 similar to GP|21536488|gb unknown {Arabidopsis thaliana... 133 2e-31
TC88371 similar to GP|9757793|dbj|BAB08291.1 nodulin-like protei... 132 4e-31
AL371805 similar to GP|3329366|gb| nodule-specific protein Nlj70... 108 5e-24
BI311760 similar to GP|21536488|gb unknown {Arabidopsis thaliana... 103 1e-22
BG644430 similar to PIR|F84542|F845 nodulin-like protein [import... 102 3e-22
TC90651 similar to PIR|T02581|T02581 nodulin-like protein [impor... 100 2e-21
CA990929 similar to PIR|T05828|T058 hypothetical protein T5K18.2... 78 8e-15
BG448486 77 2e-14
CA918335 similar to PIR|C96837|C968 nodulin-like protein 38383-... 67 1e-11
AL371806 similar to GP|3329366|gb|A nodule-specific protein Nlj7... 51 1e-06
BI308768 weakly similar to PIR|A84681|A846 nodulin-like protein ... 41 0.001
TC81281 similar to PIR|D96589|D96589 hypothetical protein T22H22... 39 0.007
TC76477 similar to GP|7320865|emb|CAB81951.1 integral membrane t... 30 1.8
>TC77151 similar to PIR|T10241|T10241 hypothetical protein T11I11.190 -
Arabidopsis thaliana, partial (78%)
Length = 2122
Score = 915 bits (2364), Expect = 0.0
Identities = 460/544 (84%), Positives = 494/544 (90%), Gaps = 3/544 (0%)
Frame = +3
Query: 7 SVSTAGKWLGLVSAIWIQSISGNNYTFSNYSHALKSLMHLTQLQLNNLSVAKDVGKAFGL 66
SVSTA KW G V+A+WIQ+ISGNNYTFSNYS ALKSLMHLTQLQLNNLSVAKDVGKAFGL
Sbjct: 57 SVSTATKWFGFVAAVWIQAISGNNYTFSNYSDALKSLMHLTQLQLNNLSVAKDVGKAFGL 236
Query: 67 LAGLSSDFLPTWAILLIGSVEGLIGYGVQWLVVGQFINPLPYWQMCVFLCLGGNSTTWMN 126
LAGL+SD LPTWAILLIGS EGLIGYGVQWLVVGQ+I PLPYWQMCVFLC+GGNSTTWMN
Sbjct: 237 LAGLASDRLPTWAILLIGSFEGLIGYGVQWLVVGQYIQPLPYWQMCVFLCMGGNSTTWMN 416
Query: 127 TAVLVTSIRNFRRNRGPVSGILKGFVGLSTAIFTNLCSALFADDPASFLLMLALIPFAVC 186
TAVLVT IRNFRRNRGPVSGILKG+VGLSTAIFTNLCSAL ADDPA FLL LALIPF VC
Sbjct: 417 TAVLVTCIRNFRRNRGPVSGILKGYVGLSTAIFTNLCSALVADDPAFFLLTLALIPFIVC 596
Query: 187 IAGVFFLREVPPAKTVTAEDDSEEASYFGVCNAVAVVVAVYLLAYGFVPSPSSLVSRVFV 246
+ GVFFLREVP AKT TA +DSEE+ YFG+CNAVAVV+AVYLLAYGFVP+ ++LVSRVFV
Sbjct: 597 LTGVFFLREVPVAKTTTAAEDSEESKYFGICNAVAVVLAVYLLAYGFVPNANTLVSRVFV 776
Query: 247 AVLLVLLASPVGIPVYSYFKGRKS-KSNRDVEGQRVTEPLLIQSDDKENGAVT--VAAEE 303
AVLLVLLASP+GIPVY+YFKGR S + DVEGQRV EPLL + + VT + AE
Sbjct: 777 AVLLVLLASPLGIPVYAYFKGRNSGRDGGDVEGQRVREPLLQNGEKESETTVTDALVAET 956
Query: 304 EVVVVKGRPAVGEEHTIWEAMRSVDFWILFTSFLCGVGTGLAVMNNMGQIGLALGYTDVS 363
EVVV+KG+PA+GEEHTI E M+S+DFWILF SFLCGVGTGLAVMNNMGQIGLALGYTDVS
Sbjct: 957 EVVVIKGQPAIGEEHTIMEVMKSLDFWILFVSFLCGVGTGLAVMNNMGQIGLALGYTDVS 1136
Query: 364 LFVSLTSIWGFFGRIISGSVSELFIKKAATPRPLWNAASQILMAVGYILLAMALPGSLYI 423
LFVSLTSIWGFFGRI+SGSVSE FIKK+ TPRPLWNA SQILMAVGYILLA+A+PGSLYI
Sbjct: 1137LFVSLTSIWGFFGRIVSGSVSEHFIKKSGTPRPLWNAISQILMAVGYILLALAMPGSLYI 1316
Query: 424 GSIVVGICYGVRLAITVPTASELFGLKYYGLIYNILILNLPLGSFLFSGLLAGILYDREA 483
GSI+VGICYGVRLA+TVPTASELFGLKYYGLIYNILILNLPLGSFLFSGLLAGILYD EA
Sbjct: 1317GSIIVGICYGVRLAVTVPTASELFGLKYYGLIYNILILNLPLGSFLFSGLLAGILYDMEA 1496
Query: 484 TATEGGGNTCVGGHCYRLVFIVMAAACIVGFFLDILLSIRTKNVYNKISMSKKSKKSLGT 543
T TEGGGNTCVGGHCYRLVFIVMA AC+VGFFLDILLS RTK VYNKI MSK+SKKS T
Sbjct: 1497TTTEGGGNTCVGGHCYRLVFIVMAGACVVGFFLDILLSYRTKTVYNKIYMSKRSKKSSVT 1676
Query: 544 SSSQ 547
SSSQ
Sbjct: 1677SSSQ 1688
>TC93786 similar to PIR|F84542|F84542 nodulin-like protein [imported] -
Arabidopsis thaliana, partial (26%)
Length = 554
Score = 201 bits (512), Expect = 5e-52
Identities = 96/132 (72%), Positives = 112/132 (84%)
Frame = +1
Query: 11 AGKWLGLVSAIWIQSISGNNYTFSNYSHALKSLMHLTQLQLNNLSVAKDVGKAFGLLAGL 70
A KWLG V+AIW+Q+I GNNYTF+NYS LKSLM LTQ+QLN+LSVAKDVGKAFG+L+GL
Sbjct: 82 AEKWLGFVTAIWVQAICGNNYTFANYSDVLKSLMALTQMQLNDLSVAKDVGKAFGILSGL 261
Query: 71 SSDFLPTWAILLIGSVEGLIGYGVQWLVVGQFINPLPYWQMCVFLCLGGNSTTWMNTAVL 130
SD PT AIL+IG++ G IGYG QWLVV Q I PLPY MC+FLC+GGNS+TWMNTAVL
Sbjct: 262 VSDRWPTSAILIIGAIMGFIGYGAQWLVVSQRIAPLPYCLMCIFLCMGGNSSTWMNTAVL 441
Query: 131 VTSIRNFRRNRG 142
VT +RNF +NRG
Sbjct: 442 VTCMRNFPKNRG 477
Score = 32.3 bits (72), Expect = 0.48
Identities = 29/99 (29%), Positives = 43/99 (43%), Gaps = 31/99 (31%)
Frame = +2
Query: 89 LIGYGVQWLVVGQ---FINPLPYWQM---------------------CVFLCLGGNSTTW 124
L+ Y V +L+VGQ F++ + W CV+ C+ W
Sbjct: 242 LVFYQVLFLIVGQLQLFLSLVLLWDSLVMELNGLLLAKE*PLFLIA*CVYSCV------W 403
Query: 125 MNTAV-------LVTSIRNFRRNRGPVSGILKGFVGLST 156
+ TA L + F++ P+SGILKG+VGLST
Sbjct: 404 VETAAHG*TQQYL*LA*ETFQKIVVPISGILKGYVGLST 520
>BM815643 similar to PIR|T10241|T10 hypothetical protein T11I11.190 -
Arabidopsis thaliana, partial (21%)
Length = 415
Score = 193 bits (490), Expect = 2e-49
Identities = 91/123 (73%), Positives = 106/123 (85%)
Frame = +1
Query: 409 GYILLAMALPGSLYIGSIVVGICYGVRLAITVPTASELFGLKYYGLIYNILILNLPLGSF 468
GYI LAMALPGSLYIGSI+VGICYGVRL IT ASELFGLKYYGL+YNILILNLP+GSF
Sbjct: 1 GYIALAMALPGSLYIGSILVGICYGVRLTITPAAASELFGLKYYGLLYNILILNLPIGSF 180
Query: 469 LFSGLLAGILYDREATATEGGGNTCVGGHCYRLVFIVMAAACIVGFFLDILLSIRTKNVY 528
+FSGL+AG LYD EAT+ GGGNTC G HC+ LV+++MA AC++G LD+ L+ RTKNVY
Sbjct: 181 IFSGLIAGYLYDIEATSVPGGGNTCSGAHCFMLVYVIMAFACVLGCGLDLFLAFRTKNVY 360
Query: 529 NKI 531
+KI
Sbjct: 361 SKI 369
>TC79657 similar to PIR|T02581|T02581 nodulin-like protein [imported] -
Arabidopsis thaliana, partial (41%)
Length = 1082
Score = 177 bits (450), Expect = 7e-45
Identities = 99/252 (39%), Positives = 146/252 (57%), Gaps = 15/252 (5%)
Frame = +2
Query: 292 KENGAVTVAAEEEVVV----VKGRPAVGEEHTIWEAMRSVDFWILFTSFLCGVGTGLAVM 347
K N AV+V+A ++ V PA GE++TI +A+ S+D ILF + +CGVG L +
Sbjct: 23 KVNSAVSVSAPKKDPKWWEDVFNPPARGEDYTILQALFSMDMLILFVACICGVGGTLTAI 202
Query: 348 NNMGQIGLALGYT--DVSLFVSLTSIWGFFGRIISGSVSELFIKKAATPRPLWNAASQIL 405
+N+GQIG +L Y +S FVSL SIW + GR+ SG VSE F+ K PRPL + +
Sbjct: 203 DNLGQIGTSLRYPKKSISTFVSLVSIWNYLGRVFSGFVSEHFLTKYRFPRPLMLTMTLFV 382
Query: 406 MAVGYILLAMALPGSLYIGSIVVGICYGVRLAITVPTASELFGLKYYGLIYNILILNLPL 465
VG++L+A +P LY+ S+++G C+G + + SELFGLKYY +YN + PL
Sbjct: 383 SCVGHLLIAFDVPEGLYVASVIIGFCFGAQWPLLFAIISELFGLKYYATLYNFGSVASPL 562
Query: 466 GSFLFSGLLAGILYDREAT---------ATEGGGNTCVGGHCYRLVFIVMAAACIVGFFL 516
G ++ + + G LYD+EA EG CVG C++L FI++ AA G +
Sbjct: 563 GLYVLNVKITGHLYDKEAKKQLEALGKHRIEGHELNCVGVDCFKLSFIIITAATFFGAVV 742
Query: 517 DILLSIRTKNVY 528
++L RT+ Y
Sbjct: 743 SLILVSRTRKFY 778
>TC88989 weakly similar to PIR|C96837|C96837 nodulin-like protein
38383-40406 [imported] - Arabidopsis thaliana, partial
(35%)
Length = 817
Score = 172 bits (436), Expect = 3e-43
Identities = 88/201 (43%), Positives = 125/201 (61%)
Frame = +2
Query: 14 WLGLVSAIWIQSISGNNYTFSNYSHALKSLMHLTQLQLNNLSVAKDVGKAFGLLAGLSSD 73
W+GL +A+W+Q SGN +TF YSH+LKS++ Q Q+ L VA D+G+ GLL G++ +
Sbjct: 215 WVGLGAAVWVQIASGNTFTFPLYSHSLKSVLGFNQRQVTLLGVANDIGENVGLLPGIACN 394
Query: 74 FLPTWAILLIGSVEGLIGYGVQWLVVGQFINPLPYWQMCVFLCLGGNSTTWMNTAVLVTS 133
P W IL +G+ IGYGV WL V Q + LPY + L + NS+ W+ TAVLVT+
Sbjct: 395 KFPPWLILCVGAFASFIGYGVLWLAVSQTLTNLPYLLLWFALVIATNSSAWLTTAVLVTN 574
Query: 134 IRNFRRNRGPVSGILKGFVGLSTAIFTNLCSALFADDPASFLLMLALIPFAVCIAGVFFL 193
+RNF +RG V+GILKG+ GLS A+FT + S L + ++FLL LA+ VC +F +
Sbjct: 575 MRNFPVSRGKVAGILKGYGGLSAAVFTEIYSLLLHNSSSTFLLFLAIGIPVVCFCMMFLV 754
Query: 194 REVPPAKTVTAEDDSEEASYF 214
R P ++DS S+F
Sbjct: 755 RPCTP----XLDEDSTSNSHF 805
>TC89576 similar to PIR|T02581|T02581 nodulin-like protein [imported] -
Arabidopsis thaliana, partial (37%)
Length = 950
Score = 149 bits (375), Expect = 4e-36
Identities = 75/191 (39%), Positives = 113/191 (58%)
Frame = +2
Query: 12 GKWLGLVSAIWIQSISGNNYTFSNYSHALKSLMHLTQLQLNNLSVAKDVGKAFGLLAGLS 71
G+W + ++ I + +G Y F YS +K+ + Q LN LS KD G G+LAGL
Sbjct: 278 GRWFVIFASFLIMAAAGATYMFGLYSGDIKTTLGYDQSTLNLLSFFKDFGSNVGVLAGLV 457
Query: 72 SDFLPTWAILLIGSVEGLIGYGVQWLVVGQFINPLPYWQMCVFLCLGGNSTTWMNTAVLV 131
++ P W +L IG++ GY + WL V + I WQMC+++C+G NS ++ NT LV
Sbjct: 458 NELYPPWVVLTIGAILNFFGYFMIWLSVTKKIARPKVWQMCLYICIGANSQSFANTGSLV 637
Query: 132 TSIRNFRRNRGPVSGILKGFVGLSTAIFTNLCSALFADDPASFLLMLALIPFAVCIAGVF 191
T ++NF +RG V GILKG+VGLS AI T L SA++ DD + +L + +P A+ A +
Sbjct: 638 TCVKNFPESRGAVLGILKGYVGLSGAIITQLYSAIYYDDTKALILFIGWLPAAISFAFLR 817
Query: 192 FLREVPPAKTV 202
+R + P + V
Sbjct: 818 TIRYMKPVRQV 850
>TC89586 similar to PIR|C96837|C96837 nodulin-like protein 38383-40406
[imported] - Arabidopsis thaliana, partial (13%)
Length = 916
Score = 137 bits (346), Expect = 8e-33
Identities = 69/168 (41%), Positives = 100/168 (59%), Gaps = 5/168 (2%)
Frame = +2
Query: 383 VSELFIKKAATPRPLWNAASQILMAVGYILLAMALPGSLYIGSIVVGICYGVRLAITVPT 442
VSE F++ PR W +Q +M + Y+L A A+ G+LY +G+CYGV+++I +PT
Sbjct: 5 VSEHFVRTKLIPRTFWLTCTQTVMLLVYLLFAFAVNGTLYPAVAFLGVCYGVQVSIMIPT 184
Query: 443 ASELFGLKYYGLIYNILILNLPLGSFLFSGLLAGILYDREATATEG-----GGNTCVGGH 497
SELFGLK +G+ NI+ L PLG+ LFS LLAG +YD+EA G G +CVG
Sbjct: 185 TSELFGLKNFGVFSNIMSLGNPLGATLFSALLAGSIYDKEAAKQHGINLLASGVSCVGAS 364
Query: 498 CYRLVFIVMAAACIVGFFLDILLSIRTKNVYNKISMSKKSKKSLGTSS 545
C++L F +++ C G L I+L++R K VY + + TSS
Sbjct: 365 CFKLTFFILSGVCAAGIILSIILTLRIKPVYQMLYAGGSFRLPQTTSS 508
>AJ502488 similar to GP|21536488|gb unknown {Arabidopsis thaliana}, partial
(25%)
Length = 664
Score = 133 bits (334), Expect = 2e-31
Identities = 65/135 (48%), Positives = 93/135 (68%), Gaps = 1/135 (0%)
Frame = +3
Query: 8 VSTAGKWLGLVSAIWIQSISGNNYTFSNYSHALKSLMHLTQLQLNNLSVAKDVGKAFGLL 67
V + KW+ L++ IWIQ+ +G N+ FS+YS +KS++ +TQLQLN+LSVA D+GKAFG
Sbjct: 234 VGESRKWVVLIATIWIQAFTGTNFDFSSYSSEMKSVLDITQLQLNSLSVASDMGKAFGWC 413
Query: 68 AGLSSDFLPTWAILLIGSVEGLIGYGVQWLVVGQFINPLPYWQMCVFLCL-GGNSTTWMN 126
+G++ + P W +L++ + GL+GYG QWLV+ + I LPY+ + FLCL G S W N
Sbjct: 414 SGVTLMYFPLWVVLIMSAFLGLLGYGFQWLVIQRLIT-LPYY-LVFFLCLIAGCSICWFN 587
Query: 127 TAVLVTSIRNFRRNR 141
T V I+NF RNR
Sbjct: 588 TVCYVLCIKNFTRNR 632
>TC88371 similar to GP|9757793|dbj|BAB08291.1 nodulin-like protein
{Arabidopsis thaliana}, partial (28%)
Length = 1096
Score = 132 bits (331), Expect = 4e-31
Identities = 72/190 (37%), Positives = 103/190 (53%), Gaps = 18/190 (9%)
Frame = +1
Query: 370 SIWGFFGRIISGSVSELFIKKAATPRPLWNAASQILMAVGYILLAMALPGSLYIGSIVVG 429
SIW F GR+ G +SE+ +K PRP A Q++M VG++ + M PGS+Y+G+++VG
Sbjct: 4 SIWNFLGRVGGGYISEIVVKDHTFPRPAALAVFQLVMTVGHLFIGMGWPGSMYVGTLLVG 183
Query: 430 ICYGVRLAITVPTASELFGLKYYGLIYNILILNLPLGSFLFSGLLAGILYDREATATEGG 489
+ YG A+ TASELFGL+ +G +YN + L P+G+ +FS L+A +YD EA G
Sbjct: 184 LGYGAHWAVVPATASELFGLRNFGALYNFITLANPVGTLVFSSLIASRIYDYEAEKQAHG 363
Query: 490 GN------------------TCVGGHCYRLVFIVMAAACIVGFFLDILLSIRTKNVYNKI 531
G C G C+ L +MA CIV L + L RT+ VY +
Sbjct: 364 GQHLNIASFVSSALNVGDAPKCEGSICFFLTSTIMAGLCIVAAGLSMFLVFRTRIVYASL 543
Query: 532 SMSKKSKKSL 541
K S +SL
Sbjct: 544 -YGKSSMRSL 570
>AL371805 similar to GP|3329366|gb| nodule-specific protein Nlj70 {Lotus
japonicus}, partial (24%)
Length = 482
Score = 108 bits (270), Expect = 5e-24
Identities = 54/133 (40%), Positives = 77/133 (57%)
Frame = +2
Query: 12 GKWLGLVSAIWIQSISGNNYTFSNYSHALKSLMHLTQLQLNNLSVAKDVGKAFGLLAGLS 71
G+W + S+ I S+SG +Y F YS +KS++ Q L LS KD+G G+L+GL
Sbjct: 83 GRWFMMFSSFMIMSVSGASYMFGLYSREMKSVLGYDQSTLTLLSFYKDLGSCIGILSGLL 262
Query: 72 SDFLPTWAILLIGSVEGLIGYGVQWLVVGQFINPLPYWQMCVFLCLGGNSTTWMNTAVLV 131
++ P W +L IG V GY + WL V + I+ W MC++ +G NS NT V+V
Sbjct: 263 NEITPPWVVLTIGGVLNFFGYFMIWLAVTRKISKPQIWNMCLYTFIGANSHCSTNTGVVV 442
Query: 132 TSIRNFRRNRGPV 144
TS+RNF +RG V
Sbjct: 443 TSVRNFPGSRGIV 481
>BI311760 similar to GP|21536488|gb unknown {Arabidopsis thaliana}, partial
(30%)
Length = 641
Score = 103 bits (258), Expect = 1e-22
Identities = 62/180 (34%), Positives = 100/180 (55%), Gaps = 2/180 (1%)
Frame = +2
Query: 314 VGEEHTIWEAMRSVDFWILFTSFLCGVGTGLAVMNNMGQIGLALGYT-DVSLFVSLTSIW 372
+GEEH+ ++ +DFW+ + ++ CG GL NN+GQI +LG++ S V+L S +
Sbjct: 92 LGEEHSAAVLVKRLDFWLYYIAYFCGGTIGLVYSNNLGQIAQSLGHSYRTSTLVTLYSSF 271
Query: 373 GFFGRIISGSVSELFIKKAATPRPLWNAASQILMAVGYILLAMALPG-SLYIGSIVVGIC 431
FFGR++S ++ + K R W + + + +ILLA + +L G+ ++G+
Sbjct: 272 SFFGRLLS-AMPDYIRNKFYFARTGWLTIALLPTPIAFILLASSESAMALNTGTALIGLS 448
Query: 432 YGVRLAITVPTASELFGLKYYGLIYNILILNLPLGSFLFSGLLAGILYDREATATEGGGN 491
G A V SELFG + +NILI N+P+GS L+ G +A I+YD A + GN
Sbjct: 449 SGFIFAAAVAVTSELFGPDSLSVNHNILITNIPIGSLLY-GFMAAIVYDANAISAPENGN 625
>BG644430 similar to PIR|F84542|F845 nodulin-like protein [imported] -
Arabidopsis thaliana, partial (10%)
Length = 785
Score = 102 bits (255), Expect = 3e-22
Identities = 49/57 (85%), Positives = 54/57 (93%)
Frame = +1
Query: 389 KKAATPRPLWNAASQILMAVGYILLAMALPGSLYIGSIVVGICYGVRLAITVPTASE 445
+K+ TPRPLWNA SQILMAVGYILLA+A+PGSLYIGSI+VGICYGVRLA TVPTASE
Sbjct: 613 RKSGTPRPLWNAISQILMAVGYILLALAMPGSLYIGSIIVGICYGVRLAGTVPTASE 783
>TC90651 similar to PIR|T02581|T02581 nodulin-like protein [imported] -
Arabidopsis thaliana, partial (22%)
Length = 460
Score = 99.8 bits (247), Expect = 2e-21
Identities = 48/126 (38%), Positives = 73/126 (57%)
Frame = +3
Query: 12 GKWLGLVSAIWIQSISGNNYTFSNYSHALKSLMHLTQLQLNNLSVAKDVGKAFGLLAGLS 71
G+W + ++ I S SG Y F YS +K+ + Q LN LS KD+G G+ +GL
Sbjct: 81 GRWFVVFASFLIMSASGATYMFGLYSSTIKTSLAYDQTTLNLLSFFKDLGGNLGVFSGLI 260
Query: 72 SDFLPTWAILLIGSVEGLIGYGVQWLVVGQFINPLPYWQMCVFLCLGGNSTTWMNTAVLV 131
++ P + +L IGS+ GY + WL V + I WQMC+++C+G NS ++ NT LV
Sbjct: 261 NEITPPYVVLAIGSLLNFFGYFMIWLAVTKKIPKPKVWQMCLYICIGANSQSFSNTGSLV 440
Query: 132 TSIRNF 137
T ++NF
Sbjct: 441 TCVKNF 458
>CA990929 similar to PIR|T05828|T058 hypothetical protein T5K18.230 -
Arabidopsis thaliana, partial (13%)
Length = 539
Score = 78.2 bits (191), Expect = 8e-15
Identities = 49/132 (37%), Positives = 72/132 (54%), Gaps = 6/132 (4%)
Frame = +1
Query: 410 YILLAMA-LPGSLYIGSIVVGICYGVRLAITVPTASELFGLKYYGLIYNILILNLPLGSF 468
+ILLA++ +L +G+ ++G+ G + V SELFG G+ +NILI N+PLGS
Sbjct: 7 FILLAISGTKTTLQLGTSLIGLSSGFVFSAAVSITSELFGPNSVGMNHNILITNIPLGSC 186
Query: 469 LFSGLLAGILYDREATATEGG-----GNTCVGGHCYRLVFIVMAAACIVGFFLDILLSIR 523
L+ GLLA ++YD AT+ + C+G CY FI + IVG LL +R
Sbjct: 187 LY-GLLAALVYDSNATSRRDSIWLREMSMCMGRKCYMQTFIWWSCISIVGLVSSFLLFLR 363
Query: 524 TKNVYNKISMSK 535
TK Y+ +K
Sbjct: 364 TKQAYDGYERNK 399
>BG448486
Length = 356
Score = 76.6 bits (187), Expect = 2e-14
Identities = 49/123 (39%), Positives = 70/123 (56%), Gaps = 3/123 (2%)
Frame = +3
Query: 203 TAEDDSEEASYFGVCNAVAVVVAVYLLAYGFVPSPSSLVSRVFVAVLLVLLASPVGIPVY 262
T+ ++++E +F V N +AV VAVYLLA+ ++S VF LL+LL P+ +P+Y
Sbjct: 3 TSTEENKETQFFNVFNLIAVTVAVYLLAFDISGPHKHVISLVFTVGLLILLXMPLLVPLY 182
Query: 263 -SYFKGRKSKSNRDVEGQRVTEPLLIQ--SDDKENGAVTVAAEEEVVVVKGRPAVGEEHT 319
FK R S + V EPLL Q S++KE +EE V +K +P +GEEHT
Sbjct: 183 LVVFKTRPSVDKE----KEVHEPLLAQKVSEEKEE----TRTKEEEVXIKRKPVIGEEHT 338
Query: 320 IWE 322
I E
Sbjct: 339 IIE 347
>CA918335 similar to PIR|C96837|C968 nodulin-like protein 38383-40406
[imported] - Arabidopsis thaliana, partial (12%)
Length = 277
Score = 67.4 bits (163), Expect = 1e-11
Identities = 33/91 (36%), Positives = 49/91 (53%)
Frame = +2
Query: 288 QSDDKENGAVTVAAEEEVVVVKGRPAVGEEHTIWEAMRSVDFWILFTSFLCGVGTGLAVM 347
Q + E + E + K +P GE+ EA+ DFW+LF + GVGTG+ V+
Sbjct: 2 QDNSSEIAMLLALGEGAIKQKKRKPKRGEDFKFTEAIVKADFWLLFFVYFVGVGTGVTVL 181
Query: 348 NNMGQIGLALGYTDVSLFVSLTSIWGFFGRI 378
NN+ QIG+A G D + +S+ S F GR+
Sbjct: 182 NNLAQIGIAQGEEDTTTLLSIFSFCNFVGRL 274
>AL371806 similar to GP|3329366|gb|A nodule-specific protein Nlj70 {Lotus
japonicus}, partial (16%)
Length = 472
Score = 51.2 bits (121), Expect = 1e-06
Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 9/93 (9%)
Frame = +2
Query: 464 PLGSFLFSGLLAGILYDREATAT---------EGGGNTCVGGHCYRLVFIVMAAACIVGF 514
P+GS+L S +AG LYD+EA G C G CY+L FI++ + G
Sbjct: 17 PIGSYLLSVRVAGHLYDKEAIKQMAALGLMRKPGEELNCNGSQCYKLAFIIITVVSLFGA 196
Query: 515 FLDILLSIRTKNVYNKISMSKKSKKSLGTSSSQ 547
+ + L IRT+ Y K + KK K+ T ++
Sbjct: 197 LVSLTLVIRTREFY-KGDIYKKFKEEANTVENE 292
>BI308768 weakly similar to PIR|A84681|A846 nodulin-like protein [imported] -
Arabidopsis thaliana, partial (7%)
Length = 561
Score = 41.2 bits (95), Expect = 0.001
Identities = 23/64 (35%), Positives = 32/64 (49%), Gaps = 9/64 (14%)
Frame = -1
Query: 474 LAGILYDREATATE---------GGGNTCVGGHCYRLVFIVMAAACIVGFFLDILLSIRT 524
+AG LYD+EA G CVG C+RL FI++ AA + G + ++L RT
Sbjct: 555 VAGHLYDKEAKRQLIEKGVKRKLGQELNCVGASCFRLSFIIITAATLFGAIISLILVART 376
Query: 525 KNVY 528
Y
Sbjct: 375 NKFY 364
>TC81281 similar to PIR|D96589|D96589 hypothetical protein T22H22.15
[imported] - Arabidopsis thaliana, partial (24%)
Length = 585
Score = 38.5 bits (88), Expect = 0.007
Identities = 26/88 (29%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
Frame = +2
Query: 355 LALGYTDVSLFVSLTSIWGFFGRIISGSVSELFIKKAATPRPLWNAASQILMAVGYILLA 414
L LG + SLF S+ +I G I+SGS+++ ++AA S++ +G++ +A
Sbjct: 188 LNLGVAEYSLFGSILTIGAMVGAIVSGSLADYAGRRAAM------GFSELFCILGWLAIA 349
Query: 415 MA-LPGSLYIGSIVVGICYGVRLAITVP 441
++ + LY+G +++G G+ L+ VP
Sbjct: 350 VSKVAWWLYVGRLLLGCGMGI-LSYVVP 430
>TC76477 similar to GP|7320865|emb|CAB81951.1 integral membrane transporter
protein {Homo sapiens}, partial (12%)
Length = 1164
Score = 30.4 bits (67), Expect = 1.8
Identities = 24/71 (33%), Positives = 37/71 (51%), Gaps = 5/71 (7%)
Frame = -3
Query: 371 IWGFFGRIISGSVSELFIKKAATPRPLWNAA-----SQILMAVGYILLAMALPGSLYIGS 425
I G GR++SG ++L A PRP+ N S+ L +V I++ + + GS+ S
Sbjct: 334 IAGARGRVLSGKANDLEASGAQRPRPILNLLIRGIFSRCL*SV-CIIIFIVVNGSVXPIS 158
Query: 426 IVVGICYGVRL 436
+ I Y VRL
Sbjct: 157 YIHNIMYXVRL 125
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.324 0.139 0.417
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,704,079
Number of Sequences: 36976
Number of extensions: 265525
Number of successful extensions: 1327
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 1300
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1315
length of query: 547
length of database: 9,014,727
effective HSP length: 101
effective length of query: 446
effective length of database: 5,280,151
effective search space: 2354947346
effective search space used: 2354947346
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 61 (28.1 bits)
Lotus: description of TM0112.1