BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0109.1
(295 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC92013 homologue to GP|11595557|emb|CAC18142. related to c-modu... 39 0.002
TC87439 weakly similar to GP|5139695|dbj|BAA81686.1 expressed in... 34 0.059
BQ137255 homologue to PIR|B34768|B347 ORF5 protein - Orf virus (... 34 0.059
TC87687 similar to GP|8894548|emb|CAB95829.1 hypothetical protei... 33 0.10
TC83962 similar to PIR|B86289|B86289 hypothetical protein AAF719... 33 0.10
TC92408 similar to PIR|C86272|C86272 hypothetical protein AAD392... 33 0.13
TC87237 similar to GP|160409|gb|AAA29651.1|| mature-parasite-inf... 33 0.17
TC91570 weakly similar to GP|7208782|emb|CAB76913.1 hypothetical... 32 0.22
BG454776 weakly similar to PIR|T49896|T4 glycine/proline-rich pr... 32 0.29
BQ751262 similar to GP|6715100|gb|A versicolorin B synthase {Asp... 32 0.29
TC89554 similar to GP|13605675|gb|AAK32831.1 AT5g62640/MRG21_6 {... 32 0.29
BQ137258 similar to GP|5917666|gb| extensin-like protein {Zea ma... 31 0.50
BQ144062 weakly similar to SP|P03211|EBN1_ EBNA-1 nuclear protei... 31 0.50
BQ151174 similar to GP|11036868|gb| PxORF73 peptide {Plutella xy... 30 0.85
BQ151301 similar to PIR|S34666|S346 glycine-rich protein - commo... 30 0.85
TC77174 similar to PIR|H84453|H84453 probable heat shock protein... 30 1.1
TC89364 weakly similar to PIR|C96745|C96745 hypothetical protein... 30 1.1
BQ144502 weakly similar to GP|6523547|emb hydroxyproline-rich gl... 30 1.5
TC76717 similar to PIR|T10863|T10863 extensin precursor - kidney... 28 3.2
TC76718 homologue to GP|8132441|gb|AAF73291.1| extensin {Pisum s... 28 3.2
>TC92013 homologue to GP|11595557|emb|CAC18142. related to c-module-binding
factor {Neurospora crassa}, partial (2%)
Length = 1437
Score = 38.9 bits (89), Expect = 0.002
Identities = 39/138 (28%), Positives = 55/138 (39%), Gaps = 9/138 (6%)
Frame = -2
Query: 148 AAETENESLTKDVPEETENESLTEDVNESLTEDVGEM-EKNESLTTDVASLSLGDDALAS 206
+A+ S T + E ES E NE EM + +E T ++S + S
Sbjct: 782 SAKDATPSATPALSEMPTKESSKEPNNEQAVLPTTEMHDSSEEATASAPAVS----PVKS 615
Query: 207 P-PPQPKTRRKLVAPQ---PAVRRSARIKTGEMEKNESLT--TDVASLSLGDDAL--ASP 258
P PP+P K P PA R S + + + E + +S+S D + ASP
Sbjct: 614 PSPPRPTEAAKEATPDLSPPAPRASRSLHRDDANEEEVIAPAASPSSVSSSDSGIPGASP 435
Query: 259 PPQPKTRRKLAAPQPAAP 276
PP P T PA P
Sbjct: 434 PPPPPTSSSRRGRPPAGP 381
Score = 28.1 bits (61), Expect = 4.2
Identities = 19/80 (23%), Positives = 33/80 (40%), Gaps = 2/80 (2%)
Frame = -2
Query: 174 NESLTEDVGEMEKNESLTTDVASLSLGDDAL--ASPPPQPKTRRKLVAPQPAVRRSARIK 231
+ SL D E+ + +S+S D + ASPPP P T PA R+
Sbjct: 542 SRSLHRDDANEEEVIAPAASPSSVSSSDSGIPGASPPPPPPTSSSRRGRPPAGPTVVRLG 363
Query: 232 TGEMEKNESLTTDVASLSLG 251
++E +++ + +G
Sbjct: 362 ESDLESESEISSSESESGIG 303
>TC87439 weakly similar to GP|5139695|dbj|BAA81686.1 expressed in cucumber
hypocotyls {Cucumis sativus}, partial (57%)
Length = 897
Score = 34.3 bits (77), Expect = 0.059
Identities = 24/87 (27%), Positives = 36/87 (40%)
Frame = +3
Query: 204 LASPPPQPKTRRKLVAPQPAVRRSARIKTGEMEKNESLTTDVASLSLGDDALASPPPQPK 263
+A+PP P T + +P +S+ T + T AS +++PPP P
Sbjct: 171 VAAPPTTPTTPAPVASP-----KSSPPATSPKAAAPTATPPAASSPPAVTPVSTPPPAPV 335
Query: 264 TRRKLAAPQPAAPQPAVRRSARIKTTP 290
+ P P + PAV A TTP
Sbjct: 336 PVKSPPTPAPVSSPPAVTPVAAPTTTP 416
>BQ137255 homologue to PIR|B34768|B347 ORF5 protein - Orf virus (strain NZ2),
partial (10%)
Length = 1161
Score = 34.3 bits (77), Expect = 0.059
Identities = 28/96 (29%), Positives = 39/96 (40%)
Frame = +1
Query: 200 GDDALASPPPQPKTRRKLVAPQPAVRRSARIKTGEMEKNESLTTDVASLSLGDDALASPP 259
G A A PP P + R+ +PQ RR+ R + + + A + P
Sbjct: 43 GTKAGAPPPGPPPSNRR--SPQTERRRNERPRRPANATRAAPPGENADGIRRTPQNPTDP 216
Query: 260 PQPKTRRKLAAPQPAAPQPAVRRSARIKTTPKKFKD 295
QP ++ A P PAA QP SAR P + D
Sbjct: 217 SQPTSQAPPAPPHPAASQPTTPPSARPAPAPARRPD 324
>TC87687 similar to GP|8894548|emb|CAB95829.1 hypothetical protein {Cicer
arietinum}, partial (67%)
Length = 1969
Score = 33.5 bits (75), Expect = 0.10
Identities = 40/162 (24%), Positives = 73/162 (44%), Gaps = 6/162 (3%)
Frame = +3
Query: 118 ECCVTAEEENKSLKENVASETENKSLMEHVAAETENESLTKDVPEE---TENESLTEDVN 174
E V A++E+ K N N + E V+ + ++ +PE E ++ ++
Sbjct: 84 ESPVPADKESDQPKPNPEPVENNTTETEEVSKPSGDDK----IPESGSFKEESTIVGELP 251
Query: 175 ESLTEDVGEMEK--NESLTTDVASLSLGDDALASPPPQPKTRRKLVAPQPAVRRSARIKT 232
E+ + + E+++ E+L S A AS P P +K P+P A +T
Sbjct: 252 EAEKKALAELKQLIQEALNKHEFS------APASTTPSPVKEQK---PEPTPEAPAE-ET 401
Query: 233 GEMEKNESLTTDVASLSLGDDALAS-PPPQPKTRRKLAAPQP 273
+ ++ S T V +++ DD +++ PPP P T + A QP
Sbjct: 402 NKKDEQVSETESVVAVTTADDDVSTTPPP-PPTEAEAEAEQP 524
>TC83962 similar to PIR|B86289|B86289 hypothetical protein AAF71991.1
[imported] - Arabidopsis thaliana, partial (11%)
Length = 679
Score = 33.5 bits (75), Expect = 0.10
Identities = 27/104 (25%), Positives = 39/104 (36%)
Frame = +2
Query: 187 NESLTTDVASLSLGDDALASPPPQPKTRRKLVAPQPAVRRSARIKTGEMEKNESLTTDVA 246
N S + +S S + +SPPP P T +P P S+ T + TT
Sbjct: 74 NSSTPSPSSSTSTSTSSSSSPPPTPSTSSTTPSPPPPTSLSSPTPTSNHLSSA*PTTPTN 253
Query: 247 SLSLGDDALASPPPQPKTRRKLAAPQPAAPQPAVRRSARIKTTP 290
+L+ A+ S P Q + P P S +TTP
Sbjct: 254 TLT----AVPSTPLNSPCSNLHLPQQTSLPSPLPSSSPSYQTTP 373
>TC92408 similar to PIR|C86272|C86272 hypothetical protein AAD39278.1
[imported] - Arabidopsis thaliana, partial (5%)
Length = 709
Score = 33.1 bits (74), Expect = 0.13
Identities = 24/115 (20%), Positives = 44/115 (37%), Gaps = 2/115 (1%)
Frame = +3
Query: 122 TAEEENKSLKENVASETENKSLMEHVAAETENESLTKDVPEETENES--LTEDVNESLTE 179
T E + +K N+ S +KSL+ + +KD + + S + E E
Sbjct: 315 TPEASSAKVKSNMDSTKSSKSLLSSASKRLSGSFRSKDDQGDKVSTSSVIEEKKPEKAIT 494
Query: 180 DVGEMEKNESLTTDVASLSLGDDALASPPPQPKTRRKLVAPQPAVRRSARIKTGE 234
M+K + T + ++ + + PPP P + P P + + GE
Sbjct: 495 PAPSMKKTSTFTGKKTNSTVPNAPIXPPPPXPPIXKTSXKPGPLRQTTTGSNXGE 659
Score = 26.9 bits (58), Expect = 9.4
Identities = 27/136 (19%), Positives = 49/136 (35%), Gaps = 10/136 (7%)
Frame = +3
Query: 148 AAETENESLTKDVPEETENESLTEDVNESLTEDVGEMEKNESLTTDVASLSL-------- 199
AA +L+ ++ E E +S T + + + + + K+ AS L
Sbjct: 249 AAAVAAAALSINLQETFEQKSETPEASSAKVKSNMDSTKSSKSLLSSASKRLSGSFRSKD 428
Query: 200 --GDDALASPPPQPKTRRKLVAPQPAVRRSARIKTGEMEKNESLTTDVASLSLGDDALAS 257
GD S + K K + P P+ M+K + T + ++ + +
Sbjct: 429 DQGDKVSTSSVIEEKKPEKAITPAPS-----------MKKTSTFTGKKTNSTVPNAPIXP 575
Query: 258 PPPQPKTRRKLAAPQP 273
PPP P + P P
Sbjct: 576 PPPXPPIXKTSXKPGP 623
>TC87237 similar to GP|160409|gb|AAA29651.1|| mature-parasite-infected
erythrocyte surface antigen {Plasmodium falciparum},
partial (2%)
Length = 2007
Score = 32.7 bits (73), Expect = 0.17
Identities = 18/63 (28%), Positives = 33/63 (51%)
Frame = +1
Query: 126 ENKSLKENVASETENKSLMEHVAAETENESLTKDVPEETENESLTEDVNESLTEDVGEME 185
EN+ K+ S+ EN+ + + + ENE + + ENE E+ +E ++ E++
Sbjct: 127 ENEENKDEEKSKQENEEIKDGEKIQQENEENKDEEKSQQENE---ENKDEEKSQQENELK 297
Query: 186 KNE 188
KNE
Sbjct: 298 KNE 306
Score = 30.8 bits (68), Expect = 0.65
Identities = 17/75 (22%), Positives = 36/75 (47%), Gaps = 4/75 (5%)
Frame = +1
Query: 123 AEEENKSLKENVASETENKSLMEHVAAETENESLTKDVPEETENESLTEDVNE----SLT 178
+++EN+ +K+ + EN+ + ++ ENE + + ENE + E +T
Sbjct: 157 SKQENEEIKDGEKIQQENEENKDEEKSQQENEENKDEEKSQQENELKKNEGGEKETGEIT 336
Query: 179 EDVGEMEKNESLTTD 193
E+ + E E+ T+
Sbjct: 337 EEKSKQENEETSETN 381
>TC91570 weakly similar to GP|7208782|emb|CAB76913.1 hypothetical protein
{Cicer arietinum}, partial (17%)
Length = 1446
Score = 32.3 bits (72), Expect = 0.22
Identities = 37/171 (21%), Positives = 66/171 (37%)
Frame = +2
Query: 125 EENKSLKENVASETENKSLMEHVAAETENESLTKDVPEETENESLTEDVNESLTEDVGEM 184
++ KSL++ E +K + E +SL + PEE N+ + +N + E+
Sbjct: 230 KDEKSLEQKTLEENNDKPKKSLNGSAKEEKSLGQKTPEE-NNDKPKKSLNGGVKEEKDLG 406
Query: 185 EKNESLTTDVASLSLGDDALASPPPQPKTRRKLVAPQPAVRRSARIKTGEMEKNESLTTD 244
+K + D SL KT+ P+ ++ A+ + G +K +
Sbjct: 407 QKTQEENNDKPKKSLNGGVKEEKDLGQKTQENNDKPKKSLSGGAKEEKGLGQKAQEENNG 586
Query: 245 VASLSLGDDALASPPPQPKTRRKLAAPQPAAPQPAVRRSARIKTTPKKFKD 295
SL A + K R+ A Q P +A ++T+ KK D
Sbjct: 587 KPKKSLNGSA-----KEEKGLRQKALEQEGHNDP----NAVLQTSMKKVGD 712
>BG454776 weakly similar to PIR|T49896|T4 glycine/proline-rich protein -
Arabidopsis thaliana, partial (7%)
Length = 680
Score = 32.0 bits (71), Expect = 0.29
Identities = 24/87 (27%), Positives = 36/87 (40%), Gaps = 4/87 (4%)
Frame = +1
Query: 208 PPQPKTRRKLVAPQPAVRRSARIKTGEMEKNESLTTDVASLSLGDDALASPPPQPKTR-- 265
P QP+ RR + P+P R R+ T + + T + P P+P TR
Sbjct: 214 PCQPQPRRPPLPPRPPSRSRTRLTTRPTTRRTTRPTIRHT--------TRPTPRPTTRPM 369
Query: 266 -RKLAAPQP-AAPQPAVRRSARIKTTP 290
R+ P P +P R + R+ T P
Sbjct: 370 TRRTTRPTPRPTTRPTTRHTTRLTTKP 450
Score = 30.0 bits (66), Expect = 1.1
Identities = 23/87 (26%), Positives = 33/87 (37%), Gaps = 3/87 (3%)
Frame = +1
Query: 207 PPPQPKTR---RKLVAPQPAVRRSARIKTGEMEKNESLTTDVASLSLGDDALASPPPQPK 263
P P+P TR R+ P P R + R T + + T + P P+P
Sbjct: 340 PTPRPTTRPMTRRTTRPTP--RPTTRPTTRHTTRLTTKPTPRPTTRPTTRRTTRPTPRPT 513
Query: 264 TRRKLAAPQPAAPQPAVRRSARIKTTP 290
TR P+P R + R+ T P
Sbjct: 514 TRPTTRRTTRPTPRPTTRPTTRLMTRP 594
>BQ751262 similar to GP|6715100|gb|A versicolorin B synthase {Aspergillus
parasiticus}, partial (11%)
Length = 710
Score = 32.0 bits (71), Expect = 0.29
Identities = 19/86 (22%), Positives = 34/86 (39%), Gaps = 6/86 (6%)
Frame = +3
Query: 206 SPPPQPKTR------RKLVAPQPAVRRSARIKTGEMEKNESLTTDVASLSLGDDALASPP 259
+P P P+ R R+ +P+P+ R++R + S T + + P
Sbjct: 447 APTPSPQRRKSASRARRRSSPKPSAARTSRSTPSPSPRRSSSTATKRPPASSSPPTPASP 626
Query: 260 PQPKTRRKLAAPQPAAPQPAVRRSAR 285
P P R + ++ PA +P R
Sbjct: 627 PTPSRRARRSSSPPAPSEPPAPHGLR 704
>TC89554 similar to GP|13605675|gb|AAK32831.1 AT5g62640/MRG21_6 {Arabidopsis
thaliana}, partial (50%)
Length = 1467
Score = 32.0 bits (71), Expect = 0.29
Identities = 25/82 (30%), Positives = 33/82 (39%), Gaps = 9/82 (10%)
Frame = +2
Query: 190 LTTDVASLSLGDDALASPPPQPKTR-----RKLVAPQPAVRRSARIKTGEMEKNE----S 240
+ T V SL L PPP P + R L P P ++ S G E E +
Sbjct: 707 IPTTVVPASLPPPPLPPPPPGPPPKEQAVNRPLPPPPPPLKHSQPPPPGTSEGEERNQYA 886
Query: 241 LTTDVASLSLGDDALASPPPQP 262
L +++S G L PPP P
Sbjct: 887 LPDNLSSKEPGQVQLPPPPPPP 952
>BQ137258 similar to GP|5917666|gb| extensin-like protein {Zea mays}, partial
(3%)
Length = 1053
Score = 31.2 bits (69), Expect = 0.50
Identities = 21/56 (37%), Positives = 26/56 (45%)
Frame = -3
Query: 203 ALASPPPQPKTRRKLVAPQPAVRRSARIKTGEMEKNESLTTDVASLSLGDDALASP 258
+LASPPP P RR L AP R S T + + + A LS L+SP
Sbjct: 877 SLASPPPSPSRRRTLPAPSSCSRLSRLSSTYLLSR-----SSCARLSRRSPPLSSP 725
Score = 28.9 bits (63), Expect = 2.5
Identities = 12/18 (66%), Positives = 13/18 (71%)
Frame = -3
Query: 254 ALASPPPQPKTRRKLAAP 271
+LASPPP P RR L AP
Sbjct: 877 SLASPPPSPSRRRTLPAP 824
>BQ144062 weakly similar to SP|P03211|EBN1_ EBNA-1 nuclear protein. [strain
B95-8 Human herpesvirus 4] {Epstein-barr virus},
partial (8%)
Length = 1390
Score = 31.2 bits (69), Expect = 0.50
Identities = 24/79 (30%), Positives = 30/79 (37%)
Frame = -1
Query: 203 ALASPPPQPKTRRKLVAPQPAVRRSARIKTGEMEKNESLTTDVASLSLGDDALASPPPQP 262
A A PPP+P+ RR+ A P RS G S T PPP
Sbjct: 745 ARARPPPRPRPRRRHRARSPPPPRS---PCGPPPPKRSSATSFR---------LPPPPST 602
Query: 263 KTRRKLAAPQPAAPQPAVR 281
RR+ P+ +P P R
Sbjct: 601 PARREALLPRADSP*PTFR 545
>BQ151174 similar to GP|11036868|gb| PxORF73 peptide {Plutella xylostella
granulovirus}, partial (42%)
Length = 909
Score = 30.4 bits (67), Expect = 0.85
Identities = 22/79 (27%), Positives = 27/79 (33%)
Frame = +2
Query: 200 GDDALASPPPQPKTRRKLVAPQPAVRRSARIKTGEMEKNESLTTDVASLSLGDDALASPP 259
G A A PPP PK R R+ + G E + + G +PP
Sbjct: 398 GGRAPAPPPPPPKAREG---------RTPKPDPGSKENHNRTPGKEGPATHGPPEKKTPP 550
Query: 260 PQPKTRRKLAAPQPAAPQP 278
P PK R K P P
Sbjct: 551 PTPKRRGKHTKRAPGGGPP 607
>BQ151301 similar to PIR|S34666|S346 glycine-rich protein - common tobacco,
partial (22%)
Length = 530
Score = 30.4 bits (67), Expect = 0.85
Identities = 11/28 (39%), Positives = 16/28 (56%)
Frame = +1
Query: 251 GDDALASPPPQPKTRRKLAAPQPAAPQP 278
G++ + PP PKT++K P P P P
Sbjct: 58 GEEKTQTHPPPPKTKKKKTTPPPPPPPP 141
Score = 26.2 bits (56), Expect(2) = 1.9
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +1
Query: 200 GDDALASPPPQPKTRRKLVAPQP 222
G++ + PP PKT++K P P
Sbjct: 58 GEEKTQTHPPPPKTKKKKTTPPP 126
Score = 21.6 bits (44), Expect(2) = 1.9
Identities = 8/21 (38%), Positives = 9/21 (42%)
Frame = +2
Query: 258 PPPQPKTRRKLAAPQPAAPQP 278
PPP P + P P P P
Sbjct: 125 PPPPPHEAGAVIMPPPPPPPP 187
>TC77174 similar to PIR|H84453|H84453 probable heat shock protein [imported] -
Arabidopsis thaliana, partial (90%)
Length = 2727
Score = 30.0 bits (66), Expect = 1.1
Identities = 21/85 (24%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Frame = +2
Query: 123 AEEENKSLKENVASETENKSLMEHVAAETENES-----LTKDVPEETENESLTEDVNESL 177
+EEE KSL E V + EN++ + ++A ++ + L K V ++ E L + ++E
Sbjct: 1682 SEEELKSLDEYVENMGENQNAIYYLATDSLKSAKTAPFLEKLVQKDIEVLYLVDPIDEVA 1861
Query: 178 TEDVGEMEKNESLTTDVASLSLGDD 202
+++ ++ + + L LGD+
Sbjct: 1862 IQNLQTYKEKKFVDISKEDLELGDE 1936
>TC89364 weakly similar to PIR|C96745|C96745 hypothetical protein T9N14.3
[imported] - Arabidopsis thaliana, partial (45%)
Length = 1903
Score = 30.0 bits (66), Expect = 1.1
Identities = 20/66 (30%), Positives = 32/66 (48%)
Frame = +1
Query: 152 ENESLTKDVPEETENESLTEDVNESLTEDVGEMEKNESLTTDVASLSLGDDALASPPPQP 211
E SLT +P+E + S D+N +L G + + SL + + SL+L + L P
Sbjct: 304 EENSLTGVIPKELGHCSRLVDLNLALNSLSGNIPNSVSLMSSLNSLNLSRNKLTGTIPDN 483
Query: 212 KTRRKL 217
+ KL
Sbjct: 484 LEKMKL 501
>BQ144502 weakly similar to GP|6523547|emb hydroxyproline-rich glycoprotein
DZ-HRGP {Volvox carteri f. nagariensis}, partial (39%)
Length = 1358
Score = 29.6 bits (65), Expect = 1.5
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -3
Query: 257 SPPPQPKTRRKLAAPQPAAPQPAVRR 282
+PPP P RR A P PA +P RR
Sbjct: 495 APPPAPPPRRPPARPPPAPQRPRPRR 418
>TC76717 similar to PIR|T10863|T10863 extensin precursor - kidney bean,
partial (56%)
Length = 928
Score = 28.5 bits (62), Expect = 3.2
Identities = 22/69 (31%), Positives = 26/69 (36%)
Frame = +2
Query: 205 ASPPPQPKTRRKLVAPQPAVRRSARIKTGEMEKNESLTTDVASLSLGDDALASPPPQPKT 264
+SPPP PK K +P P V K +S V SPPP PK
Sbjct: 128 SSPPPPPKKPYKYASPPPPV-----------YKYKSPPPPVYKYK-------SPPPPPKK 253
Query: 265 RRKLAAPQP 273
K +P P
Sbjct: 254 PYKYPSPPP 280
Score = 28.1 bits (61), Expect = 4.2
Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 5/42 (11%)
Frame = +2
Query: 256 ASPPPQPKTRRKLAAPQP-----AAPQPAVRRSARIKTTPKK 292
+SPPP PK K A+P P +P P V + PKK
Sbjct: 128 SSPPPPPKKPYKYASPPPPVYKYKSPPPPVYKYKSPPPPPKK 253
Score = 27.7 bits (60), Expect = 5.5
Identities = 22/71 (30%), Positives = 29/71 (39%), Gaps = 3/71 (4%)
Frame = +2
Query: 206 SPPPQPKTRRKLVAPQPAVRRSARIKTGEMEKNESLTTDVASLSLGDDAL---ASPPPQP 262
SPPP PK K +P P V + + + K +S V + SPPP P
Sbjct: 578 SPPPPPKKPYKYPSPPPPVYK-YKSPPPPVYKYKSPPPPVYKYKSPPPPVYKYKSPPPPP 754
Query: 263 KTRRKLAAPQP 273
K K +P P
Sbjct: 755 KKPYKYPSPPP 787
Score = 27.7 bits (60), Expect = 5.5
Identities = 22/71 (30%), Positives = 29/71 (39%), Gaps = 3/71 (4%)
Frame = +2
Query: 206 SPPPQPKTRRKLVAPQPAVRRSARIKTGEMEKNESLTTDVASLSLGDDAL---ASPPPQP 262
SPPP PK K +P P V + + + K +S V + SPPP P
Sbjct: 419 SPPPPPKKPYKYPSPPPPVYK-YKSPPPPVYKYKSPPPPVYKYKSPPPPVYKYKSPPPPP 595
Query: 263 KTRRKLAAPQP 273
K K +P P
Sbjct: 596 KKPYKYPSPPP 628
>TC76718 homologue to GP|8132441|gb|AAF73291.1| extensin {Pisum sativum},
partial (63%)
Length = 712
Score = 28.5 bits (62), Expect = 3.2
Identities = 22/69 (31%), Positives = 26/69 (36%)
Frame = +1
Query: 205 ASPPPQPKTRRKLVAPQPAVRRSARIKTGEMEKNESLTTDVASLSLGDDALASPPPQPKT 264
+SPPP PK K +P P V K +S V SPPP PK
Sbjct: 211 SSPPPPPKKPYKYASPPPPV-----------YKYKSPPPPVYKYK-------SPPPPPKK 336
Query: 265 RRKLAAPQP 273
K +P P
Sbjct: 337 PYKYPSPPP 363
Score = 28.1 bits (61), Expect = 4.2
Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 5/42 (11%)
Frame = +1
Query: 256 ASPPPQPKTRRKLAAPQP-----AAPQPAVRRSARIKTTPKK 292
+SPPP PK K A+P P +P P V + PKK
Sbjct: 211 SSPPPPPKKPYKYASPPPPVYKYKSPPPPVYKYKSPPPPPKK 336
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.309 0.127 0.354
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,553,744
Number of Sequences: 36976
Number of extensions: 135844
Number of successful extensions: 1313
Number of sequences better than 10.0: 83
Number of HSP's better than 10.0 without gapping: 1002
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1273
length of query: 295
length of database: 9,014,727
effective HSP length: 95
effective length of query: 200
effective length of database: 5,502,007
effective search space: 1100401400
effective search space used: 1100401400
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 58 (26.9 bits)
Lotus: description of TM0109.1