Lotus
BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0106.7
         (717 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

BQ139629 similar to GP|15408841|dbj hypothetical protein~similar...   183  2e-46
TC92258 similar to GP|9758258|dbj|BAB08757.1 contains similarity...   141  8e-34
TC92335 similar to GP|14517422|gb|AAK62601.1 AT5g53570/MNC6_11 {...   122  6e-28
TC88302 similar to GP|8953714|dbj|BAA98077.1 contains similarity...    97  6e-22
TC81063 similar to GP|13877621|gb|AAK43888.1 Unknown protein {Ar...    67  2e-11
TC80298 weakly similar to GP|14517422|gb|AAK62601.1 AT5g53570/MN...    65  9e-11
CB892263 similar to GP|13877621|gb Unknown protein {Arabidopsis ...    52  8e-07
TC93450 similar to GP|8777354|dbj|BAA96944.1 microtubule-associa...    50  4e-06
BM815354 similar to PIR|T05242|T05 hypothetical protein F18A5.12...    49  7e-06
AW208138 similar to PIR|T06040|T060 hypothetical protein T24A18....    40  0.004
TC78510 similar to GP|6648201|gb|AAF21199.1| putative GTPase act...    39  0.007
TC90928 homologue to GP|21593435|gb|AAM65402.1 putative plant ad...    38  0.016
AW586232 similar to PIR|T05242|T05 hypothetical protein F18A5.12...    36  0.059
TC77173 similar to GP|15293109|gb|AAK93665.1 putative yeast pher...    33  0.50
AW586945 homologue to GP|23496297|gb hypothetical protein {Plasm...    31  1.5
TC93070 weakly similar to GP|17065230|gb|AAL32769.1 Unknown prot...    30  2.5
TC87972 weakly similar to PIR|F96751|F96751 unknown protein F28P...    30  3.2
CA917457                                                               30  3.2
TC77482 weakly similar to GP|15450373|gb|AAK96480.1 AT4g32480/F8...    30  3.2
TC85854 similar to PIR|T50778|T50778 copper chaperone homolog CC...    30  4.2

>BQ139629 similar to GP|15408841|dbj hypothetical protein~similar to
           Arabidopsis thaliana chromosome 2  At2g43490, partial
           (15%)
          Length = 666

 Score =  183 bits (465), Expect = 2e-46
 Identities = 88/93 (94%), Positives = 92/93 (98%)
 Frame = +1

Query: 420 LSPFVVIFEDNADAFWCFEMLLRRMRENFQMEGPTRVMKQLRELWHILELADKEMFAHLS 479
           LSPFVVIFEDNADAFWCFEMLLRRMRENF+MEGPTRVMKQLR LWHILEL+DKE+FAHLS
Sbjct: 1   LSPFVVIFEDNADAFWCFEMLLRRMRENFKMEGPTRVMKQLRALWHILELSDKELFAHLS 180

Query: 480 KIGAESLHFAFRMLLVLFRRELSFNEALSMWEM 512
           KIGAESLHFAFRMLLVLFRRELSFNEALSMWE+
Sbjct: 181 KIGAESLHFAFRMLLVLFRRELSFNEALSMWEV 279


>TC92258 similar to GP|9758258|dbj|BAB08757.1 contains similarity to GTPase
           activating protein~gene_id:MBG8.4 {Arabidopsis
           thaliana}, partial (38%)
          Length = 727

 Score =  141 bits (356), Expect = 8e-34
 Identities = 73/157 (46%), Positives = 102/157 (64%), Gaps = 1/157 (0%)
 Frame = +1

Query: 339 ISDVPQPARISAAMSQEWPVGEDRVSEWLWTLHRIVVDVVRTDSHLDFYEDTRNLARMSD 398
           + D  +P+ I +  + E  V + ++ +W+ TLH+I +DVVRTD  L FYE   NL+++ D
Sbjct: 259 LQDNNRPSSIDSVNNLE-NVTDKKLIQWMLTLHQIGLDVVRTDRTLVFYEKQENLSKLWD 435

Query: 399 ILAVYAWVDPATGYCQGMSDLLSPFVVIFEDNADAFWCFEMLLRRMRENFQMEGPT-RVM 457
           ILAVYAW+D   GY QGMSDL SP +++ +D ADAFWCFE L+RR+R NF+  G T  V 
Sbjct: 436 ILAVYAWIDKEVGYGQGMSDLCSPMIILLDDEADAFWCFERLMRRLRGNFRCTGRTLGVE 615

Query: 458 KQLRELWHILELADKEMFAHLSKIGAESLHFAFRMLL 494
            QL  L  I ++ D ++  H+  IG     FAFRML+
Sbjct: 616 AQLSNLASITQVIDPKLHKHIEHIGGGDYVFAFRMLM 726



 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 23/57 (40%), Positives = 34/57 (59%)
 Frame = +3

Query: 83  PSIRPEVWEFLLGCYALSSTAEYRRRLRAARREHYSDLVKQCQTMHSSVGTGSLAYV 139
           PSIR EVWEFLLGCY   ST + R ++R  R++    + K+   + SS    S+ ++
Sbjct: 3   PSIRGEVWEFLLGCYDPKSTFDERDQIRERRKDTICYMEKRMSPIVSSCWKWSIYHI 173


>TC92335 similar to GP|14517422|gb|AAK62601.1 AT5g53570/MNC6_11 {Arabidopsis
           thaliana}, partial (37%)
          Length = 1077

 Score =  122 bits (305), Expect = 6e-28
 Identities = 55/122 (45%), Positives = 82/122 (67%)
 Frame = +1

Query: 394 ARMSDILAVYAWVDPATGYCQGMSDLLSPFVVIFEDNADAFWCFEMLLRRMRENFQMEGP 453
           AR+  IL  YA  DP  GYCQGMSDLLSP + +  ++ +AFWCF   +++ R+NF+++  
Sbjct: 7   ARLVAILEAYALYDPEIGYCQGMSDLLSPIICVVSEDHEAFWCFVGFMKKARQNFRLD-E 183

Query: 454 TRVMKQLRELWHILELADKEMFAHLSKIGAESLHFAFRMLLVLFRRELSFNEALSMWEMM 513
             + +QL  +  I++  D  +F HL K+ AE   F +RM++VLFRREL+F + L +WE+M
Sbjct: 184 VGIRRQLDIVAKIIKFKDSHLFRHLEKLQAEDCFFVYRMVVVLFRRELTFEQTLCLWEVM 363

Query: 514 WA 515
           WA
Sbjct: 364 WA 369


>TC88302 similar to GP|8953714|dbj|BAA98077.1 contains similarity to GTPase
           activating protein~gene_id:F6N7.7 {Arabidopsis
           thaliana}, complete
          Length = 1198

 Score = 97.4 bits (241), Expect(2) = 6e-22
 Identities = 45/127 (35%), Positives = 74/127 (57%)
 Frame = +1

Query: 388 EDTRNLARMSDILAVYAWVDPATGYCQGMSDLLSPFVVIFEDNADAFWCFEMLLRRMREN 447
           +D  N+  + DIL  Y++ +   GYCQGMSDLLSP + + ED ++AFWCF  L+ R+  N
Sbjct: 382 DDNPNVNVLRDILLTYSFYNFDLGYCQGMSDLLSPILFVMEDESEAFWCFVSLMERLGPN 561

Query: 448 FQMEGPTRVMKQLRELWHILELADKEMFAHLSKIGAESLHFAFRMLLVLFRRELSFNEAL 507
           F  +    +  QL  L  ++EL D  +  +  +    +  F FR +L+ F+RE  + + +
Sbjct: 562 FNRD-QNGMHSQLFALSKLVELLDSPLHNYFKQRDCLNYFFCFRWILIQFKREFEYEKTM 738

Query: 508 SMWEMMW 514
            +WE++W
Sbjct: 739 RLWEVLW 759



 Score = 33.5 bits (75), Expect(2) = 0.004
 Identities = 16/45 (35%), Positives = 24/45 (52%)
 Frame = +3

Query: 86  RPEVWEFLLGCYALSSTAEYRRRLRAARREHYSDLVKQCQTMHSS 130
           R EVW  LLG Y   ST   R  L++ ++  Y  +  Q Q++ S+
Sbjct: 153 RNEVWGLLLGYYPYDSTYAEREFLKSVKKSEYETIKNQWQSISSA 287



 Score = 25.4 bits (54), Expect(2) = 6e-22
 Identities = 21/71 (29%), Positives = 32/71 (44%), Gaps = 4/71 (5%)
 Frame = +3

Query: 322 FPSDNAVYEAQMVNQLKISDVP----QPARISAAMSQEWPVGEDRVSEWLWTLHRIVVDV 377
           +P D+   E + +  +K S+      Q   IS+A ++ +    +R          I  DV
Sbjct: 186 YPYDSTYAEREFLKSVKKSEYETIKNQWQSISSAQAKRFTKFRERKG-------LIEKDV 344

Query: 378 VRTDSHLDFYE 388
           VRTD  L FYE
Sbjct: 345 VRTDRSLTFYE 377



 Score = 25.0 bits (53), Expect(2) = 0.004
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +2

Query: 55 KWQALSDSEGKVLGFRKALKLIVLGGVD 82
          +W    DSEG+V+      K I  GG+D
Sbjct: 59 EWITFVDSEGRVIDSEALRKRIFYGGLD 142


>TC81063 similar to GP|13877621|gb|AAK43888.1 Unknown protein {Arabidopsis
           thaliana}, partial (53%)
          Length = 749

 Score = 67.0 bits (162), Expect = 2e-11
 Identities = 46/156 (29%), Positives = 74/156 (46%), Gaps = 25/156 (16%)
 Frame = +2

Query: 361 DRVSEWLWTLHRIVVDVVRTDSHLDFYEDTRNLARMSDILAVYAWVDPATGYCQGMSDLL 420
           +R  + +  L +I VD  RT   + F++  +    +  IL  +A   PA+GY QG++DL+
Sbjct: 290 ERSDDEISMLRQIAVDCPRTVPDVAFFQQPQVQKSLERILYAWAIRHPASGYVQGINDLV 469

Query: 421 SPFVVIF-----------------------EDNADAFWCFEMLLRRMREN--FQMEGPTR 455
           +PF V+F                          AD +WC   LL  M+++  F   G  R
Sbjct: 470 TPFFVVFLSEYLEGSINNWTMSDLSSDKISNVEADCYWCLSKLLDGMQDHYTFAQPGIQR 649

Query: 456 VMKQLRELWHILELADKEMFAHLSKIGAESLHFAFR 491
           ++ +L+EL   +   D  + +H+   G E LHFAFR
Sbjct: 650 LVFKLKEL---VRRIDDPVSSHMENQGLEFLHFAFR 748



 Score = 28.5 bits (62), Expect = 9.4
 Identities = 20/51 (39%), Positives = 26/51 (50%)
 Frame = +1

Query: 73  LKLIVLGGVDPSIRPEVWEFLLGCYALSSTAEYRRRLRAARREHYSDLVKQ 123
           L+ +   GV   +RP VW  LLG YA +++      LR  R E Y D V Q
Sbjct: 121 LRELAWSGVPDYMRPTVWRLLLG-YAPTNSDRREGVLRRKRLE-YLDCVSQ 267


>TC80298 weakly similar to GP|14517422|gb|AAK62601.1 AT5g53570/MNC6_11
           {Arabidopsis thaliana}, partial (15%)
          Length = 981

 Score = 65.1 bits (157), Expect = 9e-11
 Identities = 37/118 (31%), Positives = 59/118 (49%), Gaps = 1/118 (0%)
 Frame = +2

Query: 51  LKPDKWQALSDSEGKVL-GFRKALKLIVLGGVDPSIRPEVWEFLLGCYALSSTAEYRRRL 109
           L P +W++L   +G++  G  K LK +  GGV P IR EVW FLLG Y  +ST + R  +
Sbjct: 380 LSPQQWKSLFTEDGRLRDGGTKFLKRVRNGGVHPRIRAEVWPFLLGVYDFNSTKDERDAV 559

Query: 110 RAARREHYSDLVKQCQTMHSSVGTGSLAYVVGSKVMDMRTSSKLEREMKGKTSTSNDN 167
           +   R+ Y +L +QC  +       S    +G    +    S  +      +S+S+D+
Sbjct: 560 KTQNRKQYEELRRQCTKLIKQSNENSKLNEIGEISYEGGDGSLAQDSRSSSSSSSSDD 733


>CB892263 similar to GP|13877621|gb Unknown protein {Arabidopsis thaliana},
           partial (47%)
          Length = 804

 Score = 52.0 bits (123), Expect = 8e-07
 Identities = 31/107 (28%), Positives = 49/107 (44%), Gaps = 23/107 (21%)
 Frame = +2

Query: 370 LHRIVVDVVRTDSHLDFYEDTRNLARMSDILAVYAWVDPATGYCQGMSDLLSPFVVIF-- 427
           L +I VD  RT   + F++  +    +  IL  +A   PA+GY QG++DL++PF+V+F  
Sbjct: 407 LRQIAVDCPRTVPDVTFFQQQQVQKSLERILYAWAIRHPASGYVQGINDLVTPFLVVFIS 586

Query: 428 ---------------------EDNADAFWCFEMLLRRMRENFQMEGP 453
                                   AD +WC   LL  M+E++    P
Sbjct: 587 EHLEGGIDDWSMSDLSSDKISNVEADCYWCLSKLLDGMQEHYTFAQP 727


>TC93450 similar to GP|8777354|dbj|BAA96944.1 microtubule-associated
           protein-like {Arabidopsis thaliana}, partial (22%)
          Length = 806

 Score = 49.7 bits (117), Expect = 4e-06
 Identities = 29/92 (31%), Positives = 48/92 (51%), Gaps = 7/92 (7%)
 Frame = +3

Query: 456 VMKQLRELWHILELADKEMFAHLSKIGAESLHFAFRMLLVLFRRELSFNEALSMWEMMWA 515
           V++    L+H+L LAD  + +HL  +  E  +F  R L VLF RE S ++ L +W+ ++A
Sbjct: 90  VIEASMALYHLLSLADSSLHSHLLDLEVEPQYFYLRWLRVLFGREFSLDKLLVIWDEIFA 269

Query: 516 AD-------FDESLAYDLEVNCLEALDIHLPR 540
           +D        DE++ Y   +       +H PR
Sbjct: 270 SDNSKVESSADENIDYGFRI-------LHSPR 344


>BM815354 similar to PIR|T05242|T05 hypothetical protein F18A5.120 -
           Arabidopsis thaliana, partial (31%)
          Length = 494

 Score = 48.9 bits (115), Expect = 7e-06
 Identities = 29/94 (30%), Positives = 50/94 (52%), Gaps = 15/94 (15%)
 Frame = +3

Query: 370 LHRIVVDVVRTDSHLDFYEDTRNLAR-----MSDILAVYAWVDPATGYCQGMSDLLSPFV 424
           + +I  DV RT   + F+     LA+     + +IL ++A ++P   Y QGM+++L+P  
Sbjct: 189 IEQIDRDVKRTHPDMHFFCGDSQLAKSNQEALKNILIIFAKLNPGIRYVQGMNEVLAPLF 368

Query: 425 VIFEDN----------ADAFWCFEMLLRRMRENF 448
            +F+++          AD F+CF  LL   R+NF
Sbjct: 369 YVFKNDPDEENAAFSEADTFFCFVELLSGFRDNF 470


>AW208138 similar to PIR|T06040|T060 hypothetical protein T24A18.50 -
           Arabidopsis thaliana, partial (15%)
          Length = 413

 Score = 39.7 bits (91), Expect = 0.004
 Identities = 21/50 (42%), Positives = 27/50 (54%)
 Frame = +3

Query: 45  VTVNRMLKPDKWQALSDSEGKVLGFRKALKLIVLGGVDPSIRPEVWEFLL 94
           +   + L   +W+A    EG  L   + L  I  GG+ PSIR EVWEFLL
Sbjct: 267 IKAGKTLSERRWRAAFSPEG-YLDIGRTLSRIHRGGIHPSIRGEVWEFLL 413


>TC78510 similar to GP|6648201|gb|AAF21199.1| putative GTPase activator
            protein {Arabidopsis thaliana}, partial (92%)
          Length = 2077

 Score = 38.9 bits (89), Expect = 0.007
 Identities = 18/69 (26%), Positives = 35/69 (50%)
 Frame = +2

Query: 376  DVVRTDSHLDFYEDTRNLARMSDILAVYAWVDPATGYCQGMSDLLSPFVVIFEDNADAFW 435
            D+ RT     + +     A +  +L  Y++ D   GYCQG++ + +  +++ +   DAFW
Sbjct: 1085 DLPRTFPGHAWLDTPEGHAALRRVLVAYSFRDSDVGYCQGLNYVAALLLLVMKTEEDAFW 1264

Query: 436  CFEMLLRRM 444
               +LL  +
Sbjct: 1265 MLAVLLENV 1291


>TC90928 homologue to GP|21593435|gb|AAM65402.1 putative plant adhesion
           molecule {Arabidopsis thaliana}, partial (66%)
          Length = 1058

 Score = 37.7 bits (86), Expect = 0.016
 Identities = 26/119 (21%), Positives = 52/119 (42%), Gaps = 4/119 (3%)
 Frame = +2

Query: 398 DILAVYAWVDPATGYCQGMSDLLSPFVVIFEDNADAFWCFEMLLR----RMRENFQMEGP 453
           ++L  Y+  D   GY QGM   L+  ++++    DAFW    LL+       E   + G 
Sbjct: 146 NVLKAYSVFDREVGYVQGMG-FLAGLLLLYMSEEDAFWLLVALLKGAVHAPMEGLYLAGL 322

Query: 454 TRVMKQLRELWHILELADKEMFAHLSKIGAESLHFAFRMLLVLFRRELSFNEALSMWEM 512
             V + L +   ++     ++  H ++       +A +  + +F     F+ AL +W++
Sbjct: 323 PLVQQYLFQFERLVREHLPKLGEHFTQEMINPSMYASQWFITVFSYSFPFHLALRIWDV 499


>AW586232 similar to PIR|T05242|T05 hypothetical protein F18A5.120 -
           Arabidopsis thaliana, partial (30%)
          Length = 529

 Score = 35.8 bits (81), Expect = 0.059
 Identities = 23/80 (28%), Positives = 44/80 (54%), Gaps = 6/80 (7%)
 Frame = +1

Query: 440 LLRRMRENFQMEGPTRVM---KQLRELWHILELADKEMFAHL---SKIGAESLHFAFRML 493
           LL  +R+NF  +    V+     + +L  +L   D+E++ HL   SKI  +   +AFR +
Sbjct: 7   LLSGLRDNFVQQLDNSVVGIRSTITKLSQLLRKHDEELWRHLEITSKINPQ--FYAFRWI 180

Query: 494 LVLFRRELSFNEALSMWEMM 513
            +L  +E +F ++L +W+ +
Sbjct: 181 TLLLTQEFNFADSLHIWDTL 240


>TC77173 similar to GP|15293109|gb|AAK93665.1 putative yeast pheromone
           receptor protein AR781 {Arabidopsis thaliana}, partial
           (20%)
          Length = 1380

 Score = 32.7 bits (73), Expect = 0.50
 Identities = 25/81 (30%), Positives = 45/81 (54%), Gaps = 1/81 (1%)
 Frame = -1

Query: 620 TMSSLTRKEKDELAIFCVAAILVLNRQKVIRETHSFDDMIKASALIFCFYRVI-NYYYES 678
           ++SS   K   +L  +C+ +++ L   +V+    SF   I   +LIF    VI N++Y++
Sbjct: 735 SISSNPSKSNQDL-YYCLISLIPLCCYEVVAVFESFVLPILICSLIFYKENVILNFFYQN 559

Query: 679 HNCYTPITLFLLFMFILSGVE 699
              Y+ +TLF LF+F+   +E
Sbjct: 558 ---YSMMTLFSLFLFLFFHLE 505


>AW586945 homologue to GP|23496297|gb hypothetical protein {Plasmodium
           falciparum 3D7}, partial (0%)
          Length = 677

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 17/72 (23%), Positives = 29/72 (39%)
 Frame = +1

Query: 528 VNCLEALDIHLPRDSSNDLREEVADSDDGSVKSGSQSNHNENDNDNTKASQQSNHENTDV 587
           VN     D +   D+  D  + V           + +N+N N+N+N       N++N  +
Sbjct: 349 VNIRHQKDFYYNSDNKEDYAKPVRRRKLRCANDDNNNNNNNNNNNNFNDKNNKNYKNDKI 528

Query: 588 SVWDAKLKSLSS 599
              D K+K   S
Sbjct: 529 DKSDRKVKRRKS 564


>TC93070 weakly similar to GP|17065230|gb|AAL32769.1 Unknown protein
           {Arabidopsis thaliana}, partial (19%)
          Length = 679

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 14/58 (24%), Positives = 30/58 (51%)
 Frame = +1

Query: 539 PRDSSNDLREEVADSDDGSVKSGSQSNHNENDNDNTKASQQSNHENTDVSVWDAKLKS 596
           P DS +++ E   + D+   +   + + +++D+D+         E TD++  D +LKS
Sbjct: 214 PYDSDDEIEEMDFEDDEDEDEDEDEDDDDDDDDDDEDDDDDGFAEPTDLNAKDKRLKS 387


>TC87972 weakly similar to PIR|F96751|F96751 unknown protein F28P22.12
           [imported] - Arabidopsis thaliana, partial (81%)
          Length = 901

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 20/94 (21%), Positives = 41/94 (43%), Gaps = 2/94 (2%)
 Frame = +2

Query: 220 SSPNLGRETDGSHCVIDSPFDFPALPVPNLFEKSGKDNNSSTE--HGSKLSARHRLRFDD 277
           SS +  RET G +  ID       +  PN+FE++ ++  +  +  H +  ++ H +R ++
Sbjct: 143 SSSHHHRETHGRNSDIDENTSLDDVKAPNVFERAKEEFEAIAQVFHHNNEASTHDIRDEN 322

Query: 278 EMHTFQINDNVDLIGESNGQQPRGILHSTNSEIE 311
           +M   +   N+         +   I      EI+
Sbjct: 323 QMAELKHKQNISSSSSETKTKKVNIFVKAKEEIK 424


>CA917457 
          Length = 340

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 4/33 (12%)
 Frame = -2

Query: 557 SVKSGSQSNHNENDNDNTKASQ----QSNHENT 585
           S  SG  SNH++  N NT++ Q    Q NH++T
Sbjct: 288 SPNSGESSNHHQTCNQNTQSQQRIFNQQNHQHT 190


>TC77482 weakly similar to GP|15450373|gb|AAK96480.1 AT4g32480/F8B4_180
           {Arabidopsis thaliana}, partial (13%)
          Length = 711

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 37/132 (28%), Positives = 58/132 (43%), Gaps = 15/132 (11%)
 Frame = +3

Query: 481 IGAESLHFAFRMLLVLFRRELSFNEALSMWEMMWAADFDESLAYDLEVNCLEALDIHLPR 540
           +GA SL    R L V FRRELS  + L  +        D +L  D+E   L+  D+ L  
Sbjct: 18  MGATSLSRVTRYLPVGFRRELS-RQKLQQYA-------DTNLG-DVEFEFLDDCDMGLGN 170

Query: 541 DSS---------NDLREEVADSDDGS---VKSGSQSNHNENDNDNTKASQQSNHENT--- 585
            +S         N +  ++ D +D S   V  G  +  N N  DN     Q+N   T   
Sbjct: 171 SNSSSSDEFHHDNHMELDIEDEEDKSSERVNEGCNNEENRNFWDNQLQLLQTNLYRTSSV 350

Query: 586 DVSVWDAKLKSL 597
           ++S+ +A  +++
Sbjct: 351 EISIRNATKEAI 386


>TC85854 similar to PIR|T50778|T50778 copper chaperone homolog CCH
           [imported] - soybean, partial (81%)
          Length = 853

 Score = 29.6 bits (65), Expect = 4.2
 Identities = 14/38 (36%), Positives = 24/38 (62%), Gaps = 1/38 (2%)
 Frame = +3

Query: 664 LIFCFYRVINYYYESH-NCYTPITLFLLFMFILSGVEY 700
           ++FC     ++Y  S  NCYT  TL+L+  F+++ V+Y
Sbjct: 711 IVFCR----DFYQTSFCNCYTKHTLYLILQFVMNVVDY 812


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.318    0.133    0.397 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,779,097
Number of Sequences: 36976
Number of extensions: 313341
Number of successful extensions: 1919
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 1819
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1880
length of query: 717
length of database: 9,014,727
effective HSP length: 103
effective length of query: 614
effective length of database: 5,206,199
effective search space: 3196606186
effective search space used: 3196606186
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)


Lotus: description of TM0106.7