Lotus
BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0101.4
         (376 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC78495 homologue to PIR|S53504|S53504 extensin-like protein S3 ...    39  0.003
TC77148 ENOD20                                                         39  0.004
TC88911 weakly similar to GP|13926280|gb|AAK49610.1 AT5g14920/F2...    38  0.006
TC85918 similar to GP|13562014|gb|AAK30610.1 fibroin 1 {Plectreu...    38  0.006
TC86234 similar to SP|Q02758|ATPD_PEA ATP synthase delta chain  ...    37  0.012
BF519604 similar to SP|Q02758|ATPD_ ATP synthase delta chain  ch...    37  0.012
TC85484 similar to PIR|S58083|S58083 transketolase (EC 2.2.1.1) ...    37  0.012
TC80480 similar to GP|4056493|gb|AAC98059.1| chloroplast lumen c...    37  0.012
BQ751207 weakly similar to GP|604427|gb|AA ACOB protein {Emerice...    37  0.016
TC82158 weakly similar to GP|19920013|gb|AAM08453.1 hypothetical...    36  0.028
TC85840 similar to SP|P35016|ENPL_CATRO Endoplasmin homolog prec...    35  0.036
BQ144022 homologue to GP|22831315|dbj hypothetical protein~predi...    35  0.036
BQ144307 weakly similar to GP|6523547|emb| hydroxyproline-rich g...    35  0.047
TC80732 similar to GP|21553690|gb|AAM62783.1 unknown {Arabidopsi...    35  0.047
BF635948 similar to GP|21622312|emb putative protein {Neurospora...    35  0.047
BQ139547 weakly similar to GP|11055109|gb|A protamine P1 {Onycho...    35  0.047
AL369406 similar to GP|14532594|gb| putative dihydroxyacid dehyd...    35  0.047
TC87476 homologue to PIR|T11622|T11622 extensin class 1 precurso...    30  0.056
TC79063 similar to GP|15215854|gb|AAK91471.1 At2g43170/F14B2.11 ...    35  0.062
TC82261 similar to GP|10177249|dbj|BAB10717. contains similarity...    35  0.062

>TC78495 homologue to PIR|S53504|S53504 extensin-like protein S3 - alfalfa,
           partial (97%)
          Length = 1049

 Score = 39.3 bits (90), Expect = 0.003
 Identities = 35/125 (28%), Positives = 53/125 (42%), Gaps = 4/125 (3%)
 Frame = +3

Query: 159 ETNPEPTPVDQPTSHPSPPRASFFQPSIEEEPLCKMLQAGKPSASTSPIILPYNPQTSEP 218
           + +P PTP+  P    +PP AS   P     P         P  +T P   P  P T  P
Sbjct: 438 QQSPPPTPLTPPPVQSTPPPAS--PPPASPPPF-------SPPPATPPPATP-PPATPPP 587

Query: 219 IVSETQAQEIPNPEKSNSEPQPSDHSNEEPSEREVLS----PAPTVSFLTNVLFSSSFDK 274
            ++ T    + +P  +   P P+   ++ P+   VLS    PAP +S L+  +  S  D 
Sbjct: 588 ALTPT---PLSSPPATTPAPAPAKLKSKAPALAPVLSPSDAPAPGLSSLSPSISPSGTDD 758

Query: 275 SEASR 279
           S A +
Sbjct: 759 SGAEK 773



 Score = 28.5 bits (62), Expect = 4.4
 Identities = 22/79 (27%), Positives = 27/79 (33%), Gaps = 4/79 (5%)
 Frame = +3

Query: 301 SPNRYSGPRPEPLVDPDFLIQAVPLASMPHPPPPPRSPLPENNASVSNHSS----DKSQN 356
           SPN    P   P   P    QA P      PPP   SP P  ++     S+      S  
Sbjct: 252 SPNSSPAPPTPPANTPPTTPQASPPPVQSSPPPVQSSPPPLQSSPPPAQSTPPPVQSSPP 431

Query: 357 PETETPHQNPKTNTSAHQT 375
           P  ++P   P T      T
Sbjct: 432 PVQQSPPPTPLTPPPVQST 488


>TC77148 ENOD20
          Length = 1108

 Score = 38.5 bits (88), Expect = 0.004
 Identities = 34/112 (30%), Positives = 45/112 (39%), Gaps = 3/112 (2%)
 Frame = +3

Query: 167 VDQPTSHPSPPRASFFQPSIEEEPLCKMLQAGKPSASTSPIILPYNPQTSEPIVSETQAQ 226
           +  P   PSPP      P I   P   +     PS S SP   P     S PI       
Sbjct: 417 LSSPPPPPSPPTPRSSTP-IPHPPRRSLPSPPSPSPSPSPSPSPSPSPRSTPI------- 572

Query: 227 EIPNPEK---SNSEPQPSDHSNEEPSEREVLSPAPTVSFLTNVLFSSSFDKS 275
             P+P K   ++  P PS   +  PSE   L+P+P+ S  +    SS  D+S
Sbjct: 573 --PHPRKRSPASPSPSPSLSKSPSPSESPSLAPSPSDSVASLAPSSSPSDES 722



 Score = 31.6 bits (70), Expect = 0.52
 Identities = 35/175 (20%), Positives = 65/175 (37%), Gaps = 5/175 (2%)
 Frame = +3

Query: 202 ASTSPIILPYNPQTSEPI-VSETQAQEIPNPEKSNSEPQPSDHSNEEPSEREVLSPAPTV 260
           +S+SPI+L +       I  SE+    + + E S   P P+ H+    +         T+
Sbjct: 24  SSSSPILLMFIFSIWMLISYSESTDYLVGDSENSWKFPLPTRHALTRWASNYQFIVGDTI 203

Query: 261 SFLTNVLFSSSFDKSEASRQFFQLARERVSEILEHFLTVLSPNRY----SGPRPEPLVDP 316
           +F  N    S  +  E       +  E V     + + VL         SG +    +  
Sbjct: 204 TFQYNNKTESVHEVEEEDYDRCGIRGEHVDHYDGNTMVVLKKTGIHHFISGKKRHCRLGL 383

Query: 317 DFLIQAVPLASMPHPPPPPRSPLPENNASVSNHSSDKSQNPETETPHQNPKTNTS 371
              +  +    +  PPPPP  P P ++  + +       +P + +P  +P  + S
Sbjct: 384 KLAVVVMVAPVLSSPPPPPSPPTPRSSTPIPHPPRRSLPSPPSPSPSPSPSPSPS 548



 Score = 31.2 bits (69), Expect = 0.68
 Identities = 23/89 (25%), Positives = 35/89 (38%)
 Frame = +3

Query: 162 PEPTPVDQPTSHPSPPRASFFQPSIEEEPLCKMLQAGKPSASTSPIILPYNPQTSEPIVS 221
           P P+P   P+  PSP   S   P     P  +   +  PS S S    P    +  P  S
Sbjct: 507 PSPSPSPSPSPSPSPSPRSTPIP----HPRKRSPASPSPSPSLSKSPSPSESPSLAPSPS 674

Query: 222 ETQAQEIPNPEKSNSEPQPSDHSNEEPSE 250
           ++ A   P+   S+  P P+   +   S+
Sbjct: 675 DSVASLAPSSSPSDESPSPAPSPSSSGSK 761



 Score = 29.6 bits (65), Expect = 2.0
 Identities = 23/88 (26%), Positives = 34/88 (38%), Gaps = 2/88 (2%)
 Frame = +3

Query: 161 NPEPTPVDQPTSHPSPPRASFFQPSIEE--EPLCKMLQAGKPSASTSPIILPYNPQTSEP 218
           +P P+P   P+  PSP       P       P      +  PS S SP + P +P  S  
Sbjct: 510 SPSPSPSPSPSPSPSPRSTPIPHPRKRSPASPSPSPSLSKSPSPSESPSLAP-SPSDS-- 680

Query: 219 IVSETQAQEIPNPEKSNSEPQPSDHSNE 246
            V+       P+ E  +  P PS   ++
Sbjct: 681 -VASLAPSSSPSDESPSPAPSPSSSGSK 761



 Score = 28.9 bits (63), Expect = 3.4
 Identities = 22/81 (27%), Positives = 31/81 (38%), Gaps = 10/81 (12%)
 Frame = +3

Query: 301 SPNRYSGPRPEPLVDPDFLIQAVPLASMPHPPPPP----RSPLPENNASVSNHSSDK--- 353
           SP+    P P P   P       P    P  P P     +SP P  + S++   SD    
Sbjct: 510 SPSPSPSPSPSPSPSPRSTPIPHPRKRSPASPSPSPSLSKSPSPSESPSLAPSPSDSVAS 689

Query: 354 ---SQNPETETPHQNPKTNTS 371
              S +P  E+P   P  ++S
Sbjct: 690 LAPSSSPSDESPSPAPSPSSS 752



 Score = 27.3 bits (59), Expect = 9.8
 Identities = 19/63 (30%), Positives = 27/63 (42%), Gaps = 4/63 (6%)
 Frame = +3

Query: 304 RYSGPRPEPLVDPDFLIQAVPLASMPHPPPPPRSPLPENNASVSNHSS----DKSQNPET 359
           R S P P P           P  S+P PP P  SP P  + S S  S+     + ++P +
Sbjct: 456 RSSTPIPHP-----------PRRSLPSPPSPSPSPSPSPSPSPSPRSTPIPHPRKRSPAS 602

Query: 360 ETP 362
            +P
Sbjct: 603 PSP 611


>TC88911 weakly similar to GP|13926280|gb|AAK49610.1 AT5g14920/F2G14_40
           {Arabidopsis thaliana}, partial (11%)
          Length = 1320

 Score = 38.1 bits (87), Expect = 0.006
 Identities = 30/107 (28%), Positives = 41/107 (38%), Gaps = 8/107 (7%)
 Frame = +3

Query: 166 PVDQPTSHPSPPRASFFQPSIEEEPLCKMLQAGKPSASTSPIILPYNPQTSEPIVSETQA 225
           P   PT     P  +  + +    P  K  +A K S   SP ILP +P  + P +    +
Sbjct: 621 PAPAPTHKKKAPAPAPDKETPAPAPTHKKKKAPKSSPVPSPAILPPSPAPT-PAIDTPSS 797

Query: 226 QEIPNPEKSNSEPQP--------SDHSNEEPSEREVLSPAPTVSFLT 264
              P+PE    EP P          HS  +      L+P PT S  T
Sbjct: 798 APAPSPEDDAPEPPPPHKHKRRKHKHSKHKKHHALALAPEPTSSSST 938


>TC85918 similar to GP|13562014|gb|AAK30610.1 fibroin 1 {Plectreurys tristis},
            partial (8%)
          Length = 4117

 Score = 38.1 bits (87), Expect = 0.006
 Identities = 47/268 (17%), Positives = 104/268 (38%), Gaps = 25/268 (9%)
 Frame = -1

Query: 10   KVEVKIADARPRRRIHLKDYP---LWSKADDPEAIRIYLDDLKQQDL-EIVVDEFFRNLQ 65
            ++E ++ +     +  ++D P      K+ D      + + +KQ ++ E   ++  +   
Sbjct: 2806 QIEKELVETNEENQPKIEDIPEAETTEKSSDATETNQFEEKVKQAEISETSAEKEEKPEL 2627

Query: 66   DPPDFESPRKRKQVEASEEKDPSDGDD-------DDDDEPPPQKKGKKVRIATQVTHLQP 118
            +P   E P+  K+ E   ++   + +        +   E   +K    +   T++  ++P
Sbjct: 2626 EPLATEEPKVTKEPEKESQEKSEEAEQPKAIAIVESTVEANEEKTAAAISEETKIIEVEP 2447

Query: 119  TQELARTAPSTRITRSVVRASSKFVV------LLDDDLNLLDAIYDET---NPEPTPVDQ 169
            T+ +      T +  + +      V        L ++L   +    ET    P  T V  
Sbjct: 2446 TETVKEEPMVTEVATAEIVKEEPVVTEVEATETLKEELVATEVEATETVKEEPAATEVKV 2267

Query: 170  PTSHPSPPRASFFQPS--IEEEPLCKMLQAGKPSASTSPIILPYNPQTS---EPIVSETQ 224
              +    P  +   P+  ++EEPL    +A + +    P+     P  +   EP+ +E +
Sbjct: 2266 TETVKDEPVVTEVDPTETVKEEPLATEAEATE-TVKEEPVATEVEPTETVKEEPVATEVE 2090

Query: 225  AQEIPNPEKSNSEPQPSDHSNEEPSERE 252
            A E    E + +E + ++   EEP   E
Sbjct: 2089 ATETVKDEPAATEVEATETVKEEPVATE 2006


>TC86234 similar to SP|Q02758|ATPD_PEA ATP synthase delta chain  chloroplast
           precursor (EC 3.6.3.14). [Garden pea] {Pisum sativum},
           partial (98%)
          Length = 1131

 Score = 37.0 bits (84), Expect = 0.012
 Identities = 16/49 (32%), Positives = 26/49 (52%)
 Frame = +1

Query: 325 LASMPHPPPPPRSPLPENNASVSNHSSDKSQNPETETPHQNPKTNTSAH 373
           L S P+  P P+ P P+N +S S++ +  S    + +P  NP    +AH
Sbjct: 268 LQSTPNQSPKPQQPSPQNPSSTSSYPAPPSPPQNSNSPKPNPAAPAAAH 414


>BF519604 similar to SP|Q02758|ATPD_ ATP synthase delta chain  chloroplast
           precursor (EC 3.6.3.14). [Garden pea] {Pisum sativum},
           partial (39%)
          Length = 379

 Score = 37.0 bits (84), Expect = 0.012
 Identities = 16/49 (32%), Positives = 26/49 (52%)
 Frame = +3

Query: 325 LASMPHPPPPPRSPLPENNASVSNHSSDKSQNPETETPHQNPKTNTSAH 373
           L S P+  P P+ P P+N +S S++ +  S    + +P  NP    +AH
Sbjct: 81  LQSTPNQSPKPQQPSPQNPSSTSSYPAPPSPPQNSNSPKPNPAAPAAAH 227


>TC85484 similar to PIR|S58083|S58083 transketolase (EC 2.2.1.1) precursor -
           potato (fragment), partial (95%)
          Length = 2685

 Score = 37.0 bits (84), Expect = 0.012
 Identities = 29/92 (31%), Positives = 39/92 (41%)
 Frame = +2

Query: 164 PTPVDQPTSHPSPPRASFFQPSIEEEPLCKMLQAGKPSASTSPIILPYNPQTSEPIVSET 223
           PTP+ + T HP PPRAS              L +  PS ST+    P  P +  PI+S  
Sbjct: 131 PTPISRATHHPHPPRAS--------------LLSHPPSPSTAH--QPQQPTSLNPIISVI 262

Query: 224 QAQEIPNPEKSNSEPQPSDHSNEEPSEREVLS 255
                P+P   + +P  +  S    S R V S
Sbjct: 263 PPSMHPSPH--HRQPPQTHLSLRNQSTRSVSS 352


>TC80480 similar to GP|4056493|gb|AAC98059.1| chloroplast lumen common
           protein family {Arabidopsis thaliana}, partial (39%)
          Length = 1295

 Score = 37.0 bits (84), Expect = 0.012
 Identities = 26/73 (35%), Positives = 34/73 (45%), Gaps = 3/73 (4%)
 Frame = +1

Query: 307 GPRPEPLVDPDFLIQAVPLASMPHPPPPPRSPLPENNASVSNHSSDKSQN---PETETPH 363
           GP P  +      I  V L   P+ PP P  P+  +N+S+    S    N   P+T  P 
Sbjct: 7   GPYPTSVTPTSHSITTVHL--FPYHPPSPSVPIHHHNSSLHPPLSFHQSNPHLPKTTLPS 180

Query: 364 QNPKTNTSAHQTL 376
           +NPK  T  HQTL
Sbjct: 181 KNPKI-TLLHQTL 216


>BQ751207 weakly similar to GP|604427|gb|AA ACOB protein {Emericella
           nidulans}, partial (12%)
          Length = 758

 Score = 36.6 bits (83), Expect = 0.016
 Identities = 33/115 (28%), Positives = 48/115 (41%), Gaps = 7/115 (6%)
 Frame = +1

Query: 152 LLDAIYDETNPEPTPVDQPTSHPS-PPRASFFQPSIEEEPLCKMLQAGKPSASTSPIILP 210
           LL   +   NP+P P   PTS P+  P  +        +PL       +   S  P   P
Sbjct: 61  LLSHSWP*ANPQPLPAQPPTSSPARHPTQTPMSSQNSSKPL-------RSRPSPPPTFTP 219

Query: 211 YNPQTSEPIVSETQAQEIPNP------EKSNSEPQPSDHSNEEPSEREVLSPAPT 259
            +P +S  + + T     P P        S++ P+PS  +N  PS    L+PAPT
Sbjct: 220 TSPSSSFSLTAHTPTISPPPPPPPAITSPSSTPPRPSSSAN-SPS*LS-LTPAPT 378



 Score = 28.5 bits (62), Expect = 4.4
 Identities = 28/114 (24%), Positives = 44/114 (38%), Gaps = 12/114 (10%)
 Frame = +1

Query: 272 FDKSEASRQFFQLARERVSEILEHFLTVLSPNRY------SGPRPEPLVDP-DFLIQAVP 324
           F + E  R   Q ++ + S +L H     +P         S P   P   P      + P
Sbjct: 1   FPRREHHRHSSQWSKRKPSTLLSHSWP*ANPQPLPAQPPTSSPARHPTQTPMSSQNSSKP 180

Query: 325 LASMPHPPPPPRSPLPENNASVSNHSSDKSQNPE-----TETPHQNPKTNTSAH 373
           L S P PPP      P ++ S++ H+   S  P      T      P+ ++SA+
Sbjct: 181 LRSRPSPPPTFTPTSPSSSFSLTAHTPTISPPPPPPPAITSPSSTPPRPSSSAN 342



 Score = 27.3 bits (59), Expect = 9.8
 Identities = 18/61 (29%), Positives = 25/61 (40%), Gaps = 4/61 (6%)
 Frame = +1

Query: 205 SPIILPYNPQTSEPIVSETQ----AQEIPNPEKSNSEPQPSDHSNEEPSEREVLSPAPTV 260
           +P  LP  P TS P    TQ    +Q    P +S   P P+       S   + +  PT+
Sbjct: 88  NPQPLPAQPPTSSPARHPTQTPMSSQNSSKPLRSRPSPPPTFTPTSPSSSFSLTAHTPTI 267

Query: 261 S 261
           S
Sbjct: 268 S 270


>TC82158 weakly similar to GP|19920013|gb|AAM08453.1 hypothetical protein
           {Dictyostelium discoideum}, partial (4%)
          Length = 1230

 Score = 35.8 bits (81), Expect = 0.028
 Identities = 33/144 (22%), Positives = 53/144 (35%), Gaps = 1/144 (0%)
 Frame = +3

Query: 162 PEPT-PVDQPTSHPSPPRASFFQPSIEEEPLCKMLQAGKPSASTSPIILPYNPQTSEPIV 220
           P+PT P  +    P+ P+A    P +  +P        +P+   S   L   PQ ++P  
Sbjct: 57  PQPTQPQRRLQPQPTQPQAP---PQLRRKP--------QPTQGRSQRQLDLQPQPTQP-- 197

Query: 221 SETQAQEIPNPEKSNSEPQPSDHSNEEPSEREVLSPAPTVSFLTNVLFSSSFDKSEASRQ 280
            + Q Q    P+ +   PQP      +P++     P P        + S +    +   Q
Sbjct: 198 -QLQPQLRMRPQPTQPRPQPQIRLQPQPTQHTSPPPPPPPQSRIQPIMSQTIPTQDLEWQ 374

Query: 281 FFQLARERVSEILEHFLTVLSPNR 304
            F +  E  S    H     S NR
Sbjct: 375 DFAMINETPSSTTSHSSEESSGNR 446



 Score = 27.3 bits (59), Expect = 9.8
 Identities = 15/40 (37%), Positives = 20/40 (49%), Gaps = 2/40 (5%)
 Frame = +3

Query: 300 LSPNRYSGPRP-EPLVDPDFLIQAVPLA-SMPHPPPPPRS 337
           L P     P+P +P   P   +Q  P   + P PPPPP+S
Sbjct: 201 LQPQLRMRPQPTQPRPQPQIRLQPQPTQHTSPPPPPPPQS 320


>TC85840 similar to SP|P35016|ENPL_CATRO Endoplasmin homolog precursor
           (GRP94 homolog). [Rosy periwinkle  Madagascar
           periwinkle], partial (92%)
          Length = 2791

 Score = 35.4 bits (80), Expect = 0.036
 Identities = 20/64 (31%), Positives = 32/64 (49%)
 Frame = +1

Query: 43  IYLDDLKQQDLEIVVDEFFRNLQDPPDFESPRKRKQVEASEEKDPSDGDDDDDDEPPPQK 102
           IY+   K+ D+E+  DE   + ++    ESP+        EE +  D D D+D+E  P+ 
Sbjct: 886 IYIWGSKEVDVEVPADEDDESSEEEDTTESPK--------EESEDEDADKDEDEEKKPKT 1041

Query: 103 KGKK 106
           K  K
Sbjct: 1042KTVK 1053


>BQ144022 homologue to GP|22831315|dbj hypothetical protein~predicted by
           GlimmerM etc. {Oryza sativa (japonica cultivar-group)},
           partial (16%)
          Length = 1286

 Score = 35.4 bits (80), Expect = 0.036
 Identities = 39/150 (26%), Positives = 56/150 (37%), Gaps = 28/150 (18%)
 Frame = -2

Query: 230 NPEKSNSEPQPSDHSNEEPSEREVLSPAPTVSFLTNVL--------FSSSFDKSEASRQF 281
           +P +S S P P+D      +   +  P P  SF    L        FS S  +S A    
Sbjct: 904 SPPRSLSSPPPADSPLSLSAASALARPRPCASFPPRPLVRRALRSRFSLSLARSLALYVS 725

Query: 282 F------QLARERVSEILEHFLTVLSPNRYSGPRPEPLVDPD--------------FLIQ 321
           F       ++ +         L VL+P   S  RP P V P               F + 
Sbjct: 724 FLPLRPVSVSADSPLAPRSPRLRVLNPFLPSLSRPSPFVPPRSFCLQRGAPFLFFFFPLS 545

Query: 322 AVPLASMPHPPPPPRSPLPENNASVSNHSS 351
              LA++P PPPP  S LP   +  + ++S
Sbjct: 544 CSSLAALPLPPPPTPSSLPRRRSLWTGYAS 455


>BQ144307 weakly similar to GP|6523547|emb| hydroxyproline-rich glycoprotein
           DZ-HRGP {Volvox carteri f. nagariensis}, partial (24%)
          Length = 1059

 Score = 35.0 bits (79), Expect = 0.047
 Identities = 23/85 (27%), Positives = 33/85 (38%), Gaps = 6/85 (7%)
 Frame = -1

Query: 295 HFLTVLSPNRYSGPRPEPLVDPDFLIQAVPLASMPHPPP------PPRSPLPENNASVSN 348
           H    L+   Y+G  P   +  + L   +P  S P PPP      PP  P P     +S 
Sbjct: 588 HHYR*LNKPTYTGLGPSATIPRNHLRSPIPYLSTPRPPPPSPHFSPPPPPAPSPPPPLSR 409

Query: 349 HSSDKSQNPETETPHQNPKTNTSAH 373
           H +           H NP++ TS +
Sbjct: 408 HPA-----------HPNPRSPTSTY 367



 Score = 29.6 bits (65), Expect = 2.0
 Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
 Frame = -2

Query: 300 LSPNRYSGPRPEPLVDPDFLIQAVPLASMPHPPPPPRSPLPEN-NASVSNHSSDKSQNPE 358
           +SP     P P PL  PD      P   +   P PP +P P N +     + +DK+++ +
Sbjct: 461 ISPPPPLRPPPPPLPSPDIPPTPTPAPRLQLTPSPPHAPPPLNPSTHPPPNKNDKNKSNK 282

Query: 359 TE 360
            E
Sbjct: 281 IE 276



 Score = 28.5 bits (62), Expect = 4.4
 Identities = 22/72 (30%), Positives = 29/72 (39%), Gaps = 6/72 (8%)
 Frame = -2

Query: 308 PRPEPLVDPDFLIQAVPLASMP---HPPP---PPRSPLPENNASVSNHSSDKSQNPETET 361
           P PE +    F I   P+   P    PPP   PP  PLP  +   +   + + Q   +  
Sbjct: 533 PSPEIICAAQFHISPPPVPPHPLPISPPPPLRPPPPPLPSPDIPPTPTPAPRLQLTPS-P 357

Query: 362 PHQNPKTNTSAH 373
           PH  P  N S H
Sbjct: 356 PHAPPPLNPSTH 321



 Score = 27.3 bits (59), Expect = 9.8
 Identities = 19/64 (29%), Positives = 23/64 (35%)
 Frame = -2

Query: 308 PRPEPLVDPDFLIQAVPLASMPHPPPPPRSPLPENNASVSNHSSDKSQNPETETPHQNPK 367
           P P P+  P  L    P    P  PP P +P P    + S   +    NP T  P     
Sbjct: 476 PHPLPISPPPPLRPPPPPLPSPDIPPTP-TPAPRLQLTPSPPHAPPPLNPSTHPPPNKND 300

Query: 368 TNTS 371
            N S
Sbjct: 299 KNKS 288


>TC80732 similar to GP|21553690|gb|AAM62783.1 unknown {Arabidopsis
           thaliana}, partial (16%)
          Length = 760

 Score = 35.0 bits (79), Expect = 0.047
 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
 Frame = +2

Query: 208 ILPYNP---QTSEPIVSETQAQEIPNPEKSNSEPQPSDHSNEEPSEREVLSP 256
           +LP  P   + SEP  S+ ++Q  P P+  N  P+P  +SN EP  +    P
Sbjct: 92  LLPPKP*HFKMSEP-ESQNESQPSPEPQSQNGAPEPESNSNHEPDPQPETEP 244


>BF635948 similar to GP|21622312|emb putative protein {Neurospora crassa},
           partial (6%)
          Length = 538

 Score = 35.0 bits (79), Expect = 0.047
 Identities = 22/69 (31%), Positives = 33/69 (46%), Gaps = 4/69 (5%)
 Frame = +1

Query: 305 YSGPRPEPLVDPDFLIQAVPLASMPHPPPPPRS---PLPENNASVS-NHSSDKSQNPETE 360
           ++ P P P  +P+   Q    +S P PPPP  S   P P NN +   +H   + Q+   +
Sbjct: 160 FNPPNPNPNPNPNISSQFP--SSAPSPPPPSSSSSYPFPHNNNNYPYDHHHHQLQHQHQQ 333

Query: 361 TPHQNPKTN 369
             HQ  +TN
Sbjct: 334 QHHQQNQTN 360


>BQ139547 weakly similar to GP|11055109|gb|A protamine P1 {Onychogalea
           fraenata}, partial (47%)
          Length = 313

 Score = 35.0 bits (79), Expect = 0.047
 Identities = 25/71 (35%), Positives = 29/71 (40%), Gaps = 2/71 (2%)
 Frame = +2

Query: 302 PNRYSGPRPEPLVDPDFLIQAVPLASMPHPPPPP--RSPLPENNASVSNHSSDKSQNPET 359
           P  YS P   PL               P PPPPP   SP PE    + N SSD S++   
Sbjct: 143 PTAYSAPSTSPL---------------PPPPPPPAMSSPKPE----LFNWSSDSSESENQ 265

Query: 360 ETPHQNPKTNT 370
           + P   PK  T
Sbjct: 266 QRPPPQPKELT 298


>AL369406 similar to GP|14532594|gb| putative dihydroxyacid dehydratase
           {Arabidopsis thaliana}, partial (7%)
          Length = 312

 Score = 35.0 bits (79), Expect = 0.047
 Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
 Frame = -1

Query: 303 NRYSGPRPEPLVDPDFLIQA-VPLASMPHPPPPPRSPLPENNASVSNHSSDKSQNPETET 361
           ++ S P+P P   P FL+   +PL +    PP P  PLP N  +++        N   E+
Sbjct: 252 SQLSFPQPTP---PSFLLTPPLPLGAYT*NPPSPPIPLPLNPQNLT--------NTVPES 106

Query: 362 PHQNPKTNTSAHQTL 376
           P+QNPK +     T+
Sbjct: 105 PNQNPKAHHKQSSTV 61


>TC87476 homologue to PIR|T11622|T11622 extensin class 1 precursor - cowpea,
           partial (48%)
          Length = 939

 Score = 29.6 bits (65), Expect(2) = 0.056
 Identities = 29/109 (26%), Positives = 40/109 (36%), Gaps = 3/109 (2%)
 Frame = +2

Query: 162 PEPTPVDQPT---SHPSPPRASFFQPSIEEEPLCKMLQAGKPSASTSPIILPYNPQTSEP 218
           P PTP   P      P PP  S   P + + P         P    SP   P +P    P
Sbjct: 173 PPPTPSPPPPYIYKSPPPPSPSPPPPYVYKSPPPPSPSPPPPYVYKSPP--PPSPSPPPP 346

Query: 219 IVSETQAQEIPNPEKSNSEPQPSDHSNEEPSEREVLSPAPTVSFLTNVL 267
            + ++    IP    S     PS   +  PS   +   +PT+SF  + L
Sbjct: 347 YIYKSPPTTIPFTTTSICL*VPSSSFSFTPSSICLQISSPTISFTPSTL 493



 Score = 27.3 bits (59), Expect = 9.8
 Identities = 15/41 (36%), Positives = 19/41 (45%), Gaps = 6/41 (14%)
 Frame = +2

Query: 306 SGPRPEPLVDPDFLIQAVPLASMPHPP------PPPRSPLP 340
           S P P P   P ++ ++ P  S   PP      PPP SP P
Sbjct: 23  SPPPPSPSPPPPYVYKSPPPPSPSPPPPYVYKSPPPPSPSP 145



 Score = 23.9 bits (50), Expect(2) = 0.056
 Identities = 17/67 (25%), Positives = 22/67 (32%), Gaps = 2/67 (2%)
 Frame = +3

Query: 302 PNRYSGPRPEPLVDPDFLIQAVPLASMPHPPPP--PRSPLPENNASVSNHSSDKSQNPET 359
           P  Y  P P     P       P    P PPPP   +SP P + +    +       P  
Sbjct: 489 PYVYKSPPPPSASPPPPYYYKSPPPPSPSPPPPYGYKSPPPPSPSPPPPYIYKSPPPPSP 668

Query: 360 ETPHQNP 366
             P  +P
Sbjct: 669 SPPPYHP 689


>TC79063 similar to GP|15215854|gb|AAK91471.1 At2g43170/F14B2.11 {Arabidopsis
            thaliana}, partial (34%)
          Length = 1726

 Score = 34.7 bits (78), Expect = 0.062
 Identities = 51/198 (25%), Positives = 69/198 (34%), Gaps = 37/198 (18%)
 Frame = +1

Query: 62   RNLQDPPDFE-------SPRKRKQVEASEEKDPSDGDDDDDDEPPPQK----KGKKVRIA 110
            +N   PP +E       SP   + VE S E  P        D P P              
Sbjct: 1048 QNSGAPPSYEEAVGEAQSPVPERDVETSAESAPRGSSPHASDNPSPASAPTGSSPVSNNP 1227

Query: 111  TQVTHLQPTQELARTAPSTRITR------------SVVRASSKFVVLLDDDLNLLDAIYD 158
            T+VT    T   A TA ST+ T             S    +S F      +++LL ++ D
Sbjct: 1228 TEVTAAASTSVAASTAASTQETEPTDDFFDPRGPTSAAPTTSNF-----GEIDLLGSLSD 1392

Query: 159  ETNPEPTPVDQPTSHPSPPR------ASFFQPSIE--------EEPLCKMLQAGKPSAST 204
              +    P+   TS  S P       ASF  PS          E+P          S  T
Sbjct: 1393 SFSSNALPLVPATSGISTPEANTGSTASFAAPSSGSNNFNQSFEDPFGDSPFKADTSVET 1572

Query: 205  SPIILPYNPQTSEPIVSE 222
            +P    + PQT+EP  S+
Sbjct: 1573 AP-SQHHAPQTTEPSQSD 1623


>TC82261 similar to GP|10177249|dbj|BAB10717. contains similarity to
           phytocyanin/early nodulin-like protein~gene_id:K19P17.3,
           partial (7%)
          Length = 740

 Score = 34.7 bits (78), Expect = 0.062
 Identities = 33/109 (30%), Positives = 46/109 (41%)
 Frame = +1

Query: 160 TNPEPTPVDQPTSHPSPPRASFFQPSIEEEPLCKMLQAGKPSASTSPIILPYNPQTSEPI 219
           ++P P+PV    S  + P  SFF PS+   P  ++  +   S S SP+I P     S P 
Sbjct: 409 SSPTPSPVSPSESPSNSP--SFFLPSLLTSP--ELSPSPSSSPSPSPVISPSPTVLSTPP 576

Query: 220 VSETQAQEIPNPEKSNSEPQPSDHSNEEPSEREVLSPAPTVSFLTNVLF 268
            S   +   P P   +S    S  SN +     + S     SFL  V F
Sbjct: 577 HSSWISAPSPAP---SSNQMNSQSSNPKHHSVVIWSTVGGFSFLVLVSF 714



 Score = 31.2 bits (69), Expect = 0.68
 Identities = 38/145 (26%), Positives = 53/145 (36%), Gaps = 2/145 (1%)
 Frame = +1

Query: 209 LPYNPQTSEPIVSETQAQEIPNPEKSNSEPQPSDHSNEEPSEREVLSPAPTVSFLTNVLF 268
           +PYN +  +   S        NP  S+S P PS  S   PSE    SP+ + SF    L 
Sbjct: 331 IPYNRKLLQTSNSAKSFDHKENPSPSSS-PTPSPVS---PSE----SPSNSPSFFLPSLL 486

Query: 269 SSSFDKSEASRQFFQLARERVSEILEHFLTVLSPNRYSGPRPEPLVDPDFLIQAVPLAS- 327
           +S                             LSP+  S P P P++ P   + + P  S 
Sbjct: 487 TSP---------------------------ELSPSPSSSPSPSPVISPSPTVLSTPPHSS 585

Query: 328 -MPHPPPPPRSPLPENNASVSNHSS 351
            +  P P P S    + +S   H S
Sbjct: 586 WISAPSPAPSSNQMNSQSSNPKHHS 660



 Score = 29.3 bits (64), Expect = 2.6
 Identities = 21/61 (34%), Positives = 31/61 (50%)
 Frame = +1

Query: 200 PSASTSPIILPYNPQTSEPIVSETQAQEIPNPEKSNSEPQPSDHSNEEPSEREVLSPAPT 259
           PS S+SP   P +P  S    S + +  +P+   S   P+ S   +  PS   V+SP+PT
Sbjct: 397 PSPSSSPTPSPVSPSESP---SNSPSFFLPSLLTS---PELSPSPSSSPSPSPVISPSPT 558

Query: 260 V 260
           V
Sbjct: 559 V 561


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.309    0.129    0.368 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,903,363
Number of Sequences: 36976
Number of extensions: 225475
Number of successful extensions: 4796
Number of sequences better than 10.0: 335
Number of HSP's better than 10.0 without gapping: 3005
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4298
length of query: 376
length of database: 9,014,727
effective HSP length: 98
effective length of query: 278
effective length of database: 5,391,079
effective search space: 1498719962
effective search space used: 1498719962
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 59 (27.3 bits)


Lotus: description of TM0101.4