TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0093b.6
         (443 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC92834 similar to GP|16209669|gb|AAL14393.1 AT4g02500/T10P11_20...   276  1e-74
TC81546 similar to GP|16209669|gb|AAL14393.1 AT4g02500/T10P11_20...   174  5e-68
AW586147 similar to PIR|E96772|E96 hypothetical protein F1M20.6 ...   241  3e-66
CA918306 similar to PIR|T04726|T04 hypothetical protein F19F18.1...   227  6e-60
TC93269 similar to PIR|E96772|E96772 hypothetical protein F1M20....    55  7e-08
TC90927 similar to GP|9279712|dbj|BAB01269.1 cell division prote...    29  3.2
TC91004                                                                28  5.4
TC78871 similar to GP|23180022|gb|AAN14398.1 CG31065-PA {Drosoph...    28  7.1
CB893235 similar to GP|6625560|gb|A beta-glucan binding protein ...    28  7.1
TC77287 SP|Q02735|CAPP_MEDSA Phosphoenolpyruvate carboxylase (EC...    28  9.3
TC76700 SP|O48905|MDHC_MEDSA Malate dehydrogenase  cytoplasmic (...    28  9.3
AJ503437 similar to PIR|E96772|E967 hypothetical protein F1M20.6...    28  9.3

>TC92834 similar to GP|16209669|gb|AAL14393.1 AT4g02500/T10P11_20
           {Arabidopsis thaliana}, partial (46%)
          Length = 910

 Score =  276 bits (705), Expect = 1e-74
 Identities = 130/256 (50%), Positives = 177/256 (68%), Gaps = 22/256 (8%)
 Frame = +1

Query: 20  GGRRGRQIQKTFNNVKITILCGFVTILVLRGTIGVN---LSSSDADAVNQNVIE-----E 71
           G RR RQ+Q+ F    +T LC F+T++VLRGTIG         D + + Q +       E
Sbjct: 142 GSRRLRQMQRAFRRGTLTFLCLFLTVIVLRGTIGAGKFGTPEQDLNEIRQQLYSRGRRVE 321

Query: 72  TNRILAEIRSDADPSD-------------PDDAAAAETFFSPNATFTLGPKITGWDLQRK 118
            +R+L E++S  + +D              D+ A  +    PN  +TLGPKI+ WD QR 
Sbjct: 322 PHRVLEEVQSSENNNDNNNYATFDITKILKDEEAGDDEKRDPNTPYTLGPKISDWDEQRS 501

Query: 119 AWLDQNPEYPNFVR-GKARILLLTGSPPKPCDNPIGDHYLLKSIKNKIDYCRLHGIEIVY 177
           +WL  NP+YPNF+   K R+LL+TGS PKP +NP+GDHYLLKSIKNKIDYCRLHGIEI Y
Sbjct: 502 SWLSNNPDYPNFINPNKPRVLLITGSSPKPGENPVGDHYLLKSIKNKIDYCRLHGIEIFY 681

Query: 178 NLAHLDVELAGYWAKLPMIRRLMLSHPEVEWIWWMDSDAFFTDMVFELPLSKYDDYNLVL 237
           N+A LD E+AG+WAKLP+IR+L+LSHPEVE++WWMDSDA FTDM FE+P  +Y D+N V+
Sbjct: 682 NMALLDAEMAGFWAKLPLIRKLLLSHPEVEFLWWMDSDAMFTDMAFEVPWERYKDHNFVM 861

Query: 238 HGYPDLLFEQKSWIAV 253
           HG+ ++++++K+WI +
Sbjct: 862 HGWNEMIYDEKNWIGL 909


>TC81546 similar to GP|16209669|gb|AAL14393.1 AT4g02500/T10P11_20
           {Arabidopsis thaliana}, partial (39%)
          Length = 816

 Score =  174 bits (442), Expect(2) = 5e-68
 Identities = 71/110 (64%), Positives = 88/110 (79%)
 Frame = +3

Query: 322 KTFLENSFYLHGYWAGLVDRYEEMIEKYHPGLGDERWPFVTHFVGCKPCGSYGDYPVEKC 381
           K +LEN +YLHGYW  LVDRYEEMIE YHPG GD RWP VTHFVGCKPCG +GDYPVE+C
Sbjct: 189 KVYLENHYYLHGYWGILVDRYEEMIENYHPGFGDHRWPLVTHFVGCKPCGKFGDYPVERC 368

Query: 382 LSSMERAFNFADNQVLKLYGFRHRGLLSPKIKRIRNETVTPLEFVDQFDI 431
           L  M+RA+NF DNQ+L++YGF H+ L S ++KR+RNE+  PL+  D+  +
Sbjct: 369 LKQMDRAYNFGDNQILQMYGFTHKSLASRRVKRVRNESSNPLDVKDELGL 518



 Score =  101 bits (252), Expect(2) = 5e-68
 Identities = 42/59 (71%), Positives = 52/59 (87%)
 Frame = +2

Query: 261 RNCQWSLDLLDAWAPMGPKGPVREEAGKVLTANLKGRPAFEADDQSALIYLLLSKKDKW 319
           RNCQWSLD+LDAWAPMGPKG +R+EAGK+LT  LK RP FEADDQSA++YLL + +++W
Sbjct: 5   RNCQWSLDILDAWAPMGPKGKIRDEAGKILTRELKNRPVFEADDQSAMVYLLATGREQW 181


>AW586147 similar to PIR|E96772|E96 hypothetical protein F1M20.6 [imported] -
           Arabidopsis thaliana, partial (28%)
          Length = 534

 Score =  241 bits (616), Expect(2) = 3e-66
 Identities = 118/134 (88%), Positives = 125/134 (93%)
 Frame = +3

Query: 29  KTFNNVKITILCGFVTILVLRGTIGVNLSSSDADAVNQNVIEETNRILAEIRSDADPSDP 88
           KTFNNVKITILCGFVTILVLRGTIGVNL SSD+DAVNQN+IEETNRI+AEIRSDADPSDP
Sbjct: 138 KTFNNVKITILCGFVTILVLRGTIGVNLISSDSDAVNQNMIEETNRIIAEIRSDADPSDP 317

Query: 89  DDAAAAETFFSPNATFTLGPKITGWDLQRKAWLDQNPEYPNFVRGKARILLLTGSPPKPC 148
           DD     TFF+PNATFTLGPKI+ WD  RKAWL+QNPEYP+FVRGKARILLLTGSPPKPC
Sbjct: 318 DDKD--NTFFNPNATFTLGPKISDWDSDRKAWLNQNPEYPSFVRGKARILLLTGSPPKPC 491

Query: 149 DNPIGDHYLLKSIK 162
           DNPIGDHYLLKSIK
Sbjct: 492 DNPIGDHYLLKSIK 533



 Score = 28.9 bits (63), Expect(2) = 3e-66
 Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 4/38 (10%)
 Frame = +1

Query: 2  NGSAHKRTTTGLPTTTARG----GRRGRQIQKTFNNVK 35
          NGS H R+++ +  TTA       RRGRQI K    +K
Sbjct: 46 NGSLHNRSSSAVLPTTATNSNSKNRRGRQISKHSTTLK 159


>CA918306 similar to PIR|T04726|T04 hypothetical protein F19F18.180 -
           Arabidopsis thaliana, partial (39%)
          Length = 635

 Score =  227 bits (579), Expect = 6e-60
 Identities = 99/190 (52%), Positives = 134/190 (70%)
 Frame = +1

Query: 142 GSPPKPCDNPIGDHYLLKSIKNKIDYCRLHGIEIVYNLAHLDVELAGYWAKLPMIRRLML 201
           GS P PC NPIGDH LL+  KNK+DY R+HG +I YN A L  ++  YWAK P+++  M+
Sbjct: 4   GSQPSPCKNPIGDHLLLRFFKNKVDYSRIHGYDIFYNNALLHPKMFAYWAKYPVVKAAMM 183

Query: 202 SHPEVEWIWWMDSDAFFTDMVFELPLSKYDDYNLVLHGYPDLLFEQKSWIAVNTGSFLFR 261
           +HPE EWIWW+DSDA FTDM F+LPL +Y D+NLV+HG+P L+ E++SW  +N G FL R
Sbjct: 184 AHPEAEWIWWVDSDALFTDMDFKLPLKRYKDHNLVVHGWPHLIHEKRSWTGLNAGVFLIR 363

Query: 262 NCQWSLDLLDAWAPMGPKGPVREEAGKVLTANLKGRPAFEADDQSALIYLLLSKKDKWMD 321
           NCQWSLD ++AWA MGP+ P  EE GK L +  K +   E+DDQ+ L YL+  +K+  + 
Sbjct: 364 NCQWSLDFMEAWAGMGPQSPDYEEWGKTLRSTFKDKFFPESDDQTGLAYLIAIEKENGVT 543

Query: 322 KTFLENSFYL 331
           +   +  +YL
Sbjct: 544 RII*KGKYYL 573



 Score = 30.0 bits (66), Expect = 1.9
 Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 3/28 (10%)
 Frame = +3

Query: 311 LLLSKKD---KWMDKTFLENSFYLHGYW 335
           L LS +D   KW DK +LE    L GYW
Sbjct: 501 LSLSDRDRERKWGDKNYLEGEILLEGYW 584


>TC93269 similar to PIR|E96772|E96772 hypothetical protein F1M20.6
           [imported] - Arabidopsis thaliana, partial (5%)
          Length = 547

 Score = 54.7 bits (130), Expect = 7e-08
 Identities = 25/26 (96%), Positives = 26/26 (99%)
 Frame = +3

Query: 408 LSPKIKRIRNETVTPLEFVDQFDIRR 433
           LSPKIKRIRNET+TPLEFVDQFDIRR
Sbjct: 9   LSPKIKRIRNETITPLEFVDQFDIRR 86


>TC90927 similar to GP|9279712|dbj|BAB01269.1 cell division protein
           FtsH-like {Arabidopsis thaliana}, partial (28%)
          Length = 984

 Score = 29.3 bits (64), Expect = 3.2
 Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
 Frame = -3

Query: 363 HFVGCKPCGSYGDYPVEKCLSSMERAFNFADNQVLKLYGFRHRGLLSPKIKRIRNETVTP 422
           HF+ C  C       ++K L S        ++ ++K+YG +HR    P I +    + + 
Sbjct: 475 HFISCTGC-ELNSNMIKKGLPS--------EHSIVKIYGLQHR----PNISQFPTSSRSN 335

Query: 423 LEFVDQFDIRR-HSSES 438
            +  D  +IR+ HSS S
Sbjct: 334 CDIFDIVEIRQVHSSNS 284


>TC91004 
          Length = 751

 Score = 28.5 bits (62), Expect = 5.4
 Identities = 12/29 (41%), Positives = 16/29 (54%)
 Frame = -2

Query: 322 KTFLENSFYLHGYWAGLVDRYEEMIEKYH 350
           K  L  SF+L  YW   ++R EE  +K H
Sbjct: 384 KQLLRQSFFLSSYWIKRIEREEERGKKTH 298


>TC78871 similar to GP|23180022|gb|AAN14398.1 CG31065-PA {Drosophila
           melanogaster}, partial (3%)
          Length = 1475

 Score = 28.1 bits (61), Expect = 7.1
 Identities = 11/24 (45%), Positives = 15/24 (61%)
 Frame = +1

Query: 209 IWWMDSDAFFTDMVFELPLSKYDD 232
           IW+M   +FF D  F L + +YDD
Sbjct: 229 IWFMIYFSFFIDFSFNLKIKRYDD 300


>CB893235 similar to GP|6625560|gb|A beta-glucan binding protein {Phaseolus
           vulgaris}, partial (14%)
          Length = 283

 Score = 28.1 bits (61), Expect = 7.1
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +2

Query: 317 DKWMDKTFLENSFYLHGYWAGLVDR 341
           + W+D TF  N F   G W G+V +
Sbjct: 143 EPWLDGTFNGNGFLYDGKWGGIVTK 217


>TC77287 SP|Q02735|CAPP_MEDSA Phosphoenolpyruvate carboxylase (EC 4.1.1.31)
           (PEPCASE). [Alfalfa] {Medicago sativa}, partial (33%)
          Length = 1124

 Score = 27.7 bits (60), Expect = 9.3
 Identities = 14/54 (25%), Positives = 21/54 (37%), Gaps = 12/54 (22%)
 Frame = -3

Query: 208 WIWWMDSDAFFTDMVFELPLSKYDDYNLVLHG------------YPDLLFEQKS 249
           W WW   D   T+    LPL  +    L++              YP +L +Q+S
Sbjct: 813 WSWWSPLDFISTECSLNLPLESFIKLLLIIRSDVFSVQLR*TVPYPSVLLKQRS 652


>TC76700 SP|O48905|MDHC_MEDSA Malate dehydrogenase  cytoplasmic (EC
           1.1.1.37). [Alfalfa] {Medicago sativa}, complete
          Length = 1413

 Score = 27.7 bits (60), Expect = 9.3
 Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
 Frame = +3

Query: 195 MIRRLMLSH-PEVEWIWWMDSDAFFTDMVFELPLSKYDDYNLVLHGYPDLLFEQKSW 250
           +I  L  SH  E++W WWM    F   ++ +L LS++   +++L    D   E+K W
Sbjct: 225 LILLLQQSH*MELKWSWWMLHFHFLKVLLLQLMLSRHALESILLSWLVDSQ-EKKVW 392


>AJ503437 similar to PIR|E96772|E967 hypothetical protein F1M20.6 [imported]
           - Arabidopsis thaliana, partial (3%)
          Length = 435

 Score = 27.7 bits (60), Expect = 9.3
 Identities = 16/29 (55%), Positives = 22/29 (75%), Gaps = 1/29 (3%)
 Frame = +1

Query: 32  NNVK-ITILCGFVTILVLRGTIGVNLSSS 59
           NN++  TIL GFVTILVL   +G+N S++
Sbjct: 241 NNIQHSTILWGFVTILVLPCIMGLNDSTT 327


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.321    0.139    0.438 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,213,349
Number of Sequences: 36976
Number of extensions: 236979
Number of successful extensions: 1029
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1016
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1025
length of query: 443
length of database: 9,014,727
effective HSP length: 99
effective length of query: 344
effective length of database: 5,354,103
effective search space: 1841811432
effective search space used: 1841811432
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)