TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0093a.1
         (268 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC86911 homologue to GP|20339362|gb|AAM19354.1 ribulose-5-phosph...   488  e-138
TC78340 similar to GP|6007803|gb|AAF01048.1| D-ribulose-5-phosph...   154  4e-38
AL371120 similar to GP|6007803|gb| D-ribulose-5-phosphate 3-epim...    86  1e-17
TC86912 homologue to GP|20339362|gb|AAM19354.1 ribulose-5-phosph...    55  3e-12
BI267359 similar to PIR|G96658|G966 probable D-ribulose-5-phosph...    40  7e-04
TC79261 similar to PIR|T49047|T49047 quinone reductase-like prot...    32  0.34
BF643655 similar to GP|6056190|gb| putative glycerol-3-phosphate...    29  2.2
TC82423 similar to PIR|B86314|B86314 hypothetical protein AAF972...    29  2.2
AW697109 similar to GP|10177340|dbj transporter-like protein {Ar...    28  4.8
TC93814 similar to PIR|B86365|B86365 probable sulphate transport...    27  8.3

>TC86911 homologue to GP|20339362|gb|AAM19354.1
           ribulose-5-phosphate-3-epimerase {Pisum sativum},
           complete
          Length = 1233

 Score =  488 bits (1255), Expect = e-138
 Identities = 252/268 (94%), Positives = 259/268 (96%)
 Frame = +1

Query: 1   INGPSSLHSKTAIFNNHPRSLTFSRRKISTIVKASSRVDKFSKSDIIVSPSILSANFAKL 60
           ING  SLH K ++F  HPRSLTFSRRKIST+VKASSRVDKFSKSDIIVSPSILSANFAKL
Sbjct: 88  ING-LSLH-KNSLF--HPRSLTFSRRKISTVVKASSRVDKFSKSDIIVSPSILSANFAKL 255

Query: 61  GEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLPLDVHLMIVEPEQRVP 120
           GEQVKAVELAGCDWIHVDVMDGRFVPNITIGPL+VDALRPVTDLPLDVHLMIVEP+QRVP
Sbjct: 256 GEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPDQRVP 435

Query: 121 DFIKAGADIVSIHCEQSSTIHLHRTVNQVKSLGAKAGVVLNPGTPLSAIEYVLDVVDLVL 180
           DFIKAGADIVSIHCEQSSTIHLHR +NQVKSLGAKAGVVLNPGTPLSAIEYVLDVVDLVL
Sbjct: 436 DFIKAGADIVSIHCEQSSTIHLHRAINQVKSLGAKAGVVLNPGTPLSAIEYVLDVVDLVL 615

Query: 181 IMSVNPGFGGQSFIESQVKKISDLRRLCAEKGVNPWIEVDGGVTPANAYKVIEAGANALV 240
           IMSVNPGFGGQSFIESQVKKISDLRRLC EKGVNPWIEVDGGVTPANAYKVIEAGANALV
Sbjct: 616 IMSVNPGFGGQSFIESQVKKISDLRRLCVEKGVNPWIEVDGGVTPANAYKVIEAGANALV 795

Query: 241 AGSAVFGAKDYAEAIKGIKTSKRPEPVA 268
           AGSAVFGAKDYAEAIKGIK SKRPEPV+
Sbjct: 796 AGSAVFGAKDYAEAIKGIKASKRPEPVS 879


>TC78340 similar to GP|6007803|gb|AAF01048.1| D-ribulose-5-phosphate
           3-epimerase {Oryza sativa}, partial (95%)
          Length = 1138

 Score =  154 bits (388), Expect = 4e-38
 Identities = 85/217 (39%), Positives = 130/217 (59%), Gaps = 3/217 (1%)
 Frame = +3

Query: 48  VSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLPLD 107
           ++PS+LS++FA L  +   +   G DW+H+D+MDG FVPN+T+G  I+++LR  T+  LD
Sbjct: 156 IAPSMLSSDFANLASEAHRMINYGADWLHMDIMDGHFVPNLTMGAPIIESLRKHTEAYLD 335

Query: 108 VHLMIVEPEQRVPDFIKAGADIVSIHCEQSSTIHLHRTVNQVKSLGAKAGVVLNPGTPLS 167
            HLM+  P   V    KAGA   + H E S   +    +  +KS G + GV + PGT + 
Sbjct: 336 CHLMVTNPLDYVEPLGKAGASGFTFHIETSKD-NWKELIQNIKSHGMRPGVSIKPGTSVE 512

Query: 168 AIEYVLDV---VDLVLIMSVNPGFGGQSFIESQVKKISDLRRLCAEKGVNPWIEVDGGVT 224
            +  +++    V++VL+M+V PGFGGQ F+   + K+  LR+    K  +  IEVDGG+ 
Sbjct: 513 EVYPLVEAENPVEMVLVMTVEPGFGGQKFMPEMMDKVRILRK----KYPSLDIEVDGGLG 680

Query: 225 PANAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKTS 261
           P+       AGAN +VAGS+VFGA + A  I  +++S
Sbjct: 681 PSTIDVAASAGANCIVAGSSVFGAPEPAHVISLLRSS 791


>AL371120 similar to GP|6007803|gb| D-ribulose-5-phosphate 3-epimerase {Oryza
           sativa}, partial (56%)
          Length = 448

 Score = 85.9 bits (211), Expect = 1e-17
 Identities = 41/101 (40%), Positives = 62/101 (60%)
 Frame = +1

Query: 48  VSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLPLD 107
           ++PS+LS++FA L  +   +   G DW+H+D+MDG FVPN+T+G  I+++LR  T+  LD
Sbjct: 46  IAPSMLSSDFANLASEAHRMINYGADWLHMDIMDGHFVPNLTMGAPIIESLRKHTEAYLD 225

Query: 108 VHLMIVEPEQRVPDFIKAGADIVSIHCEQSSTIHLHRTVNQ 148
            HLM+  P   V    KAGA   + H E S  I + R + +
Sbjct: 226 CHLMVTNPLDYVEPLGKAGASGFTFHIETSKVIFVGRQLER 348


>TC86912 homologue to GP|20339362|gb|AAM19354.1
           ribulose-5-phosphate-3-epimerase {Pisum sativum},
           partial (15%)
          Length = 474

 Score = 55.5 bits (132), Expect(2) = 3e-12
 Identities = 28/31 (90%), Positives = 29/31 (93%)
 Frame = +2

Query: 226 ANAYKVIEAGANALVAGSAVFGAKDYAEAIK 256
           ANAYKVIEAGANALVAGSAVFGAKDYA + K
Sbjct: 11  ANAYKVIEAGANALVAGSAVFGAKDYA*SYK 103



 Score = 32.7 bits (73), Expect(2) = 3e-12
 Identities = 15/20 (75%), Positives = 16/20 (80%)
 Frame = +3

Query: 249 KDYAEAIKGIKTSKRPEPVA 268
           K   EAIKGIK SKRPEPV+
Sbjct: 81  KTMLEAIKGIKASKRPEPVS 140


>BI267359 similar to PIR|G96658|G966 probable D-ribulose-5-phosphate F9N12.9
           [imported] - Arabidopsis thaliana, partial (17%)
          Length = 415

 Score = 40.4 bits (93), Expect = 7e-04
 Identities = 15/35 (42%), Positives = 25/35 (70%)
 Frame = +1

Query: 48  VSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDG 82
           ++PS+LS++FA L  +   +   G DW+H+D+MDG
Sbjct: 178 IAPSMLSSDFANLASEAHRMINYGADWLHMDIMDG 282


>TC79261 similar to PIR|T49047|T49047 quinone reductase-like protein -
           Arabidopsis thaliana, partial (95%)
          Length = 1239

 Score = 31.6 bits (70), Expect = 0.34
 Identities = 59/230 (25%), Positives = 93/230 (39%), Gaps = 27/230 (11%)
 Frame = +3

Query: 42  SKSDIIVSPSILSANFA-------KLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLI 94
           S + + V     S NFA       K  E+     + G D+  +    G  V N  +G   
Sbjct: 132 SPTSVRVRIKATSLNFANYLQILGKYQEKPHLPFIPGSDFSGIVDSVGSNVTNFRVG--- 302

Query: 95  VDALRPVTDLPLDVHLMIVEPEQ--RVP---DFIKAGADIVSIHCEQSSTIHLHRTVNQV 149
            D +     L      ++V+  Q  RVP   D + AGA  V+        +H      Q+
Sbjct: 303 -DPVCSFAALGSYAQYLVVDQTQLFRVPEGCDLVAAGALAVAFGTSHVGLVHRA----QL 467

Query: 150 KS------LGAKAGVVLNP-------GTPLSAIEYVLDVVDLVLIMSVNP--GFGGQSFI 194
           KS      LGA  GV L         G  + A+    + V L+  M V+     G ++  
Sbjct: 468 KSGQVLLVLGAAGGVGLAAVQIGKACGAIVIAVARGAEKVQLLKSMGVDHVVDLGNENVT 647

Query: 195 ESQVKKISDLRRLCAEKGVNPWIEVDGGVTPANAYKVIEAGANALVAGSA 244
           ES VK+   ++RL   KG++   +  GG     + ++++ GAN L+ G A
Sbjct: 648 ES-VKEFLKVKRL---KGIDVLYDPVGGKLMKESLRLLKWGANILIIGFA 785


>BF643655 similar to GP|6056190|gb| putative glycerol-3-phosphate
          dehydrogenase {Arabidopsis thaliana}, partial (27%)
          Length = 587

 Score = 28.9 bits (63), Expect = 2.2
 Identities = 18/46 (39%), Positives = 24/46 (52%)
 Frame = +1

Query: 18 PRSLTFSRRKISTIVKASSRVDKFSKSDIIVSPSILSANFAKLGEQ 63
          PRS   +RR  ST    SSR DKFS    +  P +  + F+ L E+
Sbjct: 31 PRSQLSNRR--STTQTPSSRPDKFSSRHSLAPPPLTRSTFS*LAEE 162


>TC82423 similar to PIR|B86314|B86314 hypothetical protein AAF97269.1
           [imported] - Arabidopsis thaliana, partial (51%)
          Length = 748

 Score = 28.9 bits (63), Expect = 2.2
 Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
 Frame = +2

Query: 131 SIHCEQSSTIH-LHRTVNQVKSLGAKAGVVLNPGTPLSAIEYVLDVVDLVLIM 182
           + H E S  +  L R  ++ K  GAK  VV   G+PL    +V D+ D V+ M
Sbjct: 95  NFHPENSHVLPALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDLADAVVFM 253


>AW697109 similar to GP|10177340|dbj transporter-like protein {Arabidopsis
           thaliana}, partial (17%)
          Length = 651

 Score = 27.7 bits (60), Expect = 4.8
 Identities = 16/54 (29%), Positives = 31/54 (56%), Gaps = 6/54 (11%)
 Frame = -1

Query: 6   SLHSKTAIFNNHPRSLTFSRRKISTIVKASSRVDK------FSKSDIIVSPSIL 53
           ++  KTA+ N+HP+    +R K    V+  +R +       F+++D+++SP IL
Sbjct: 618 NIQEKTAVVNSHPK----TRAKAK*CVEDDNRDNP*NCHRFFTRNDLLLSPMIL 469


>TC93814 similar to PIR|B86365|B86365 probable sulphate transporter protein
           [imported] - Arabidopsis thaliana, partial (30%)
          Length = 671

 Score = 26.9 bits (58), Expect = 8.3
 Identities = 9/32 (28%), Positives = 20/32 (62%)
 Frame = +2

Query: 83  RFVPNITIGPLIVDALRPVTDLPLDVHLMIVE 114
           ++ PN+ +G +IV A+  + D+P   H+  ++
Sbjct: 398 QYTPNVVLGAIIVTAVIGLIDIPAACHIWKID 493


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.318    0.136    0.388 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,816,211
Number of Sequences: 36976
Number of extensions: 78609
Number of successful extensions: 411
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 407
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 409
length of query: 268
length of database: 9,014,727
effective HSP length: 94
effective length of query: 174
effective length of database: 5,538,983
effective search space: 963783042
effective search space used: 963783042
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.6 bits)