TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0091b.10
         (353 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

BG644677 weakly similar to GP|7682800|gb| Hypothetical protein T...    65  6e-11
BG586159 weakly similar to PIR|T47841|T4 hypothetical protein T2...    57  8e-09
BI309716 weakly similar to PIR|G96722|G9 hypothetical protein F2...    52  5e-07
BF650113 weakly similar to GP|4753889|emb| Tpv2-1c {Phaseolus vu...    35  0.033
TC85677 weakly similar to GP|6457331|gb|AAF09479.1| phytoalexin-...    31  0.82

>BG644677 weakly similar to GP|7682800|gb| Hypothetical protein T15F17.l
           {Arabidopsis thaliana}, partial (3%)
          Length = 539

 Score = 64.7 bits (156), Expect(2) = 6e-11
 Identities = 33/59 (55%), Positives = 44/59 (73%), Gaps = 1/59 (1%)
 Frame = -3

Query: 148 DISFAINLLARYSSSPTQRHWNG-KQVFRYLKGALDMSLFFPFMSKLNLIGYADAGYLS 205
           +I+F+INLL+RYSS+PT RH NG K + +YLKG +DM LF+      +LIGY +A YLS
Sbjct: 507 NITFSINLLSRYSSAPTMRH*NGIKHICKYLKGIIDMGLFYSKDCSPDLIGYVNA*YLS 331



 Score = 19.6 bits (39), Expect(2) = 6e-11
 Identities = 12/24 (50%), Positives = 13/24 (54%)
 Frame = -1

Query: 209 KQVTCLHVEEQPFHGDL*KKL**P 232
           KQVT  HV    + GDL   L *P
Sbjct: 308 KQVTYSHVGILSYLGDLRNSLL*P 237


>BG586159 weakly similar to PIR|T47841|T4 hypothetical protein T2O9.150 -
           Arabidopsis thaliana, partial (11%)
          Length = 732

 Score = 57.4 bits (137), Expect = 8e-09
 Identities = 38/143 (26%), Positives = 76/143 (52%), Gaps = 8/143 (5%)
 Frame = +1

Query: 69  IEYLKDE--VFMYQRTYIAKVLKGFYMDKSCPLCTLLVLRSLNVNKDPFRP*-----EKN 121
           +E +++E  +++ QR Y+  +L+ F M+KS            N++++P  P      ++N
Sbjct: 1   VEVIQNEEGIYICQRKYVTDLLERFGMEKS------------NLSRNPIAPRCKLIKDEN 144

Query: 122 EELLDPEVPYLSAIKALLYLASHTRLDISFAINLLARYSSSPTQRHWNG-KQVFRYLKGA 180
              +D    Y   +  L+YLA+ TR D+ + ++L++R+ + PT+ H +  K+V RYL G 
Sbjct: 145 GVKVDA-TKYKQIVGCLMYLAA-TRPDLMYVLSLISRFMNCPTELHMHAVKRVLRYLNGT 318

Query: 181 LDMSLFFPFMSKLNLIGYADAGY 203
           +++ + +       L  Y D+ Y
Sbjct: 319 INLGIMYKRNGSEKLEAYTDSDY 387


>BI309716 weakly similar to PIR|G96722|G9 hypothetical protein F20P5.25
           [imported] - Arabidopsis thaliana, partial (10%)
          Length = 744

 Score = 51.6 bits (122), Expect = 5e-07
 Identities = 42/142 (29%), Positives = 66/142 (45%), Gaps = 1/142 (0%)
 Frame = +2

Query: 63  FCLALSIEYLKDEVFMYQRTYIAKVLKGFYMDKSCPLCTLLVLRSLNVNKDPFRP*EKNE 122
           + L L +   K  + + QR Y  ++L+    D       L V  +L       +    + 
Sbjct: 287 YFLGLEVARSKQGILLNQRKYTLELLE----DSG----NLAVKSTLTPYDISLKLHNSDS 442

Query: 123 ELLDPEVPYLSAIKALLYLASHTRLDISFAINLLARYSSSPTQRHWNGK-QVFRYLKGAL 181
            L + E  Y   I  L+YL + TR DISFA+  L+++ S P Q H+    +V +YLK A 
Sbjct: 443 PLYNDETQYRRLIGKLIYLTT-TRPDISFAVQQLSQFVSKPQQVHYQAAIRVLQYLKTAP 619

Query: 182 DMSLFFPFMSKLNLIGYADAGY 203
              LF+   S L L  +AD+ +
Sbjct: 620 AKGLFYSATSNLKLSSFADSDW 685


>BF650113 weakly similar to GP|4753889|emb| Tpv2-1c {Phaseolus vulgaris},
           partial (13%)
          Length = 494

 Score = 35.4 bits (80), Expect = 0.033
 Identities = 16/62 (25%), Positives = 37/62 (58%), Gaps = 4/62 (6%)
 Frame = +1

Query: 146 RLDISFAINLLARYSSSPTQRHW-NGKQVFRYLKGALDMSLFFPFMSK---LNLIGYADA 201
           R DI +++++++++   P + H     ++ RY++G ++  L FP+ +K     LI Y+D+
Sbjct: 121 RPDICYSVSVISKFMHDPRKPHLIAANRILRYVRGTMEYGLLFPYGAKSEVYELICYSDS 300

Query: 202 GY 203
            +
Sbjct: 301 DW 306


>TC85677 weakly similar to GP|6457331|gb|AAF09479.1| phytoalexin-deficient 4
           protein {Arabidopsis thaliana}, partial (21%)
          Length = 2227

 Score = 30.8 bits (68), Expect = 0.82
 Identities = 18/39 (46%), Positives = 21/39 (53%)
 Frame = +2

Query: 184 SLFFPFMSKLNLIGYADAGYLSKYLKQVTCLHVEEQPFH 222
           SLFFPF     L     AGY  KY +++TC H    PFH
Sbjct: 449 SLFFPFQ----LNPKPGAGYFRKYRRKITCDH---WPFH 544


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.357    0.160    0.555 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,487,423
Number of Sequences: 36976
Number of extensions: 137232
Number of successful extensions: 1533
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1153
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 371
Number of HSP's gapped (non-prelim): 1197
length of query: 353
length of database: 9,014,727
effective HSP length: 97
effective length of query: 256
effective length of database: 5,428,055
effective search space: 1389582080
effective search space used: 1389582080
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 14 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 37 (21.7 bits)
S2: 59 (27.3 bits)