TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0082b.1
         (122 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC86289 similar to PIR|T45628|T45628 glycerophosphodiester phosp...    36  0.004
TC84788 similar to PIR|H85039|H85039 probable alcohol dehydrogen...    28  0.66
TC88979 similar to PIR|H96601|H96601 hypothetical protein T6H22....    28  0.86
AL379651 weakly similar to GP|15809903|gb| AT5g07010/MOJ9_18 {Ar...    25  5.6
BI310410 similar to GP|15146334|gb| At1g07080/F10K1_15 {Arabidop...    25  7.3

>TC86289 similar to PIR|T45628|T45628 glycerophosphodiester
           phosphodiesterase-like protein - Arabidopsis thaliana,
           partial (94%)
          Length = 1394

 Score = 35.8 bits (81), Expect = 0.004
 Identities = 29/116 (25%), Positives = 51/116 (43%), Gaps = 13/116 (11%)
 Frame = +2

Query: 17  IGIYPEIKAPWFHKQ-----EGKDISSKVLAVLKQYGYTGK-------NDNVYLQCFDAN 64
           +GIYPEIK P    Q     +GK    + +  L++YGY G            ++Q F   
Sbjct: 593 VGIYPEIKNPVLINQHVKWSDGKRFEDRFVETLRKYGYKGSYLSKHWLKQPAFIQSFAPT 772

Query: 65  ELKRIKNELE-PKLGMDLKLVQLIAYNDWQETYEQKADGKWVEYDYDWMFKPGAMK 119
            L  I N+ + PK+ +   +   I+  D  ++Y +     +++Y   ++   G  K
Sbjct: 773 SLVYISNQTDLPKIFLIDNVD--ISTQDTNQSYWEITSDTYLDYIKQYVVGIGPWK 934


>TC84788 similar to PIR|H85039|H85039 probable alcohol dehydrogenase
           [imported] - Arabidopsis thaliana, partial (76%)
          Length = 795

 Score = 28.5 bits (62), Expect = 0.66
 Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 5/47 (10%)
 Frame = +3

Query: 65  ELKRIKNELEPKLGMDLKLV-----QLIAYNDWQETYEQKADGKWVE 106
           E   +KN  E K  M    V     Q+I Y+DW+E   Q +   W E
Sbjct: 18  EENHVKNLFEKKSSMFKAFVC*ELQQIIVYSDWKEATRQGSTDNWGE 158


>TC88979 similar to PIR|H96601|H96601 hypothetical protein T6H22.14
           [imported] - Arabidopsis thaliana, partial (89%)
          Length = 1616

 Score = 28.1 bits (61), Expect = 0.86
 Identities = 13/58 (22%), Positives = 35/58 (59%), Gaps = 2/58 (3%)
 Frame = +1

Query: 32  EGKDISSKVLAVLKQYGYTGKNDNVY--LQCFDANELKRIKNELEPKLGMDLKLVQLI 87
           +G+ + +K L+ +++       D++   +QCFD N++  +  +++PK  +D+  ++L+
Sbjct: 445 QGEGLGNKFLSHIREV------DSILQVVQCFDDNDIIHVNGKVDPKSDIDVINLELV 600


>AL379651 weakly similar to GP|15809903|gb| AT5g07010/MOJ9_18 {Arabidopsis
           thaliana}, partial (14%)
          Length = 400

 Score = 25.4 bits (54), Expect = 5.6
 Identities = 11/27 (40%), Positives = 19/27 (69%)
 Frame = +2

Query: 35  DISSKVLAVLKQYGYTGKNDNVYLQCF 61
           D ++ +L++ K+ G+ G + NVY QCF
Sbjct: 107 DYNNLILSLPKENGW-GLSQNVYFQCF 184


>BI310410 similar to GP|15146334|gb| At1g07080/F10K1_15 {Arabidopsis
           thaliana}, partial (34%)
          Length = 738

 Score = 25.0 bits (53), Expect = 7.3
 Identities = 7/29 (24%), Positives = 19/29 (65%)
 Frame = +1

Query: 66  LKRIKNELEPKLGMDLKLVQLIAYNDWQE 94
           ++ IK  + PK+   L++++L+ +  W++
Sbjct: 340 VRLIKARMHPKVAPKLRILELVLFEKWKQ 426


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.315    0.137    0.418 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,713,344
Number of Sequences: 36976
Number of extensions: 41658
Number of successful extensions: 151
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 150
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 150
length of query: 122
length of database: 9,014,727
effective HSP length: 84
effective length of query: 38
effective length of database: 5,908,743
effective search space: 224532234
effective search space used: 224532234
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 52 (24.6 bits)