BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0081b.6
(1129 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AW775273 similar to PIR|T51447|T5 transcription regulator-like p... 298 8e-81
AI737486 similar to GP|6094552|gb unknown protein {Arabidopsis t... 282 5e-76
TC83407 similar to GP|17385678|dbj|BAB78631. putative co-repress... 278 2e-75
TC93209 similar to PIR|T51447|T51447 transcription regulator-lik... 266 5e-73
TC81082 similar to GP|17385678|dbj|BAB78631. putative co-repress... 219 4e-57
BF633689 similar to GP|9945050|gb Similar to Arabidopsis chromos... 194 2e-49
BE205344 similar to PIR|T00649|T0 hypothetical protein F3I6.12 -... 176 3e-44
BF648188 similar to GP|21903805|gb| hypothetical protein {Strept... 99 7e-21
BE326062 similar to GP|17385678|db putative co-repressor protein... 83 7e-19
TC84375 similar to GP|17385678|dbj|BAB78631. putative co-repress... 85 1e-16
TC93631 similar to EGAD|119721|127958 hypothetical protein F54D1... 74 2e-13
AW693766 similar to GP|16611746|gb| putative glycosyl transferas... 53 8e-07
TC86473 similar to PIR|E84828|E84828 probable WD-40 repeat prote... 45 2e-04
AW690594 similar to GP|23498163|emb hypothetical protein {Plasmo... 44 4e-04
TC82935 similar to GP|15150635|gb|AAK85442.1 Hypothetical protei... 42 0.001
TC89427 weakly similar to GP|4557063|gb|AAD22502.1| expressed pr... 42 0.001
TC80893 similar to GP|4557063|gb|AAD22502.1| expressed protein {... 40 0.004
TC83625 similar to GP|8096269|dbj|BAA95789.1 KED {Nicotiana taba... 40 0.005
TC80288 weakly similar to PIR|T06029|T06029 hypothetical protein... 40 0.005
TC81816 similar to GP|8096269|dbj|BAA95789.1 KED {Nicotiana taba... 40 0.005
>AW775273 similar to PIR|T51447|T5 transcription regulator-like protein -
Arabidopsis thaliana, partial (11%)
Length = 689
Score = 298 bits (763), Expect = 8e-81
Identities = 152/209 (72%), Positives = 169/209 (80%)
Frame = +1
Query: 15 QFKRPFASSRGDSYGQSQVPGGGGGGGGAGGGGEATTSQKLTTNDALSYLKQVKDMFQDQ 74
+FKR S DS S+ GG GGG GGG A+T +KLTT DALSYLK+VK+ F DQ
Sbjct: 46 KFKRCMGSPSADS---SENGGGSVGGGVVNGGGGASTPRKLTTIDALSYLKEVKNTFPDQ 216
Query: 75 REKYDLFLEVMKDFKAQRTDTAGVIARVKELFKGHNHLIFGFNTFLPKGYEITLDEDEAP 134
+EKYD+FL+VMKDFKAQ+TDT GVIA VKELFKGHN+LI+GFN +LPKG+EI LDEDEA
Sbjct: 217 KEKYDMFLQVMKDFKAQKTDTHGVIAAVKELFKGHNNLIYGFNAYLPKGHEIRLDEDEAS 396
Query: 135 AKKTVEFEEAISFVNKIKKRFQSDEHVYKSFLDILNMYRKEHKDIGEVYSEVATLFKDHR 194
KK VEFE+AISFV KIK RFQ++EHVYKSFLDILNMYR EHK I EVYSEVATLFKDH
Sbjct: 397 QKKKVEFEDAISFVGKIKNRFQNEEHVYKSFLDILNMYR*EHKTITEVYSEVATLFKDHN 576
Query: 195 DLLEEFTRFLPDTSAAPSTQHAPFGRNSL 223
DLLEEFTRFLPD S PSTQHAPFG L
Sbjct: 577 DLLEEFTRFLPDNSLEPSTQHAPFGHRDL 663
Score = 37.4 bits (85), Expect = 0.033
Identities = 21/76 (27%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Frame = +1
Query: 310 DKKKTVKKAEGMYGEAFSFCEKVKEKLSSSDD-YQTFLKCLNIFNNGIIKKNDLQNLVTD 368
D+ + +K + + +A SF K+K + + + Y++FL LN++ ++ + V
Sbjct: 379 DEDEASQKKKVEFEDAISFVGKIKNRFQNEEHVYKSFLDILNMYR*EHKTITEVYSEVAT 558
Query: 369 LLGKHSDLMDEFKDFL 384
L H+DL++EF FL
Sbjct: 559 LFKDHNDLLEEFTRFL 606
>AI737486 similar to GP|6094552|gb unknown protein {Arabidopsis thaliana},
partial (9%)
Length = 473
Score = 282 bits (722), Expect = 5e-76
Identities = 137/159 (86%), Positives = 147/159 (92%)
Frame = +3
Query: 329 CEKVKEKLSSSDDYQTFLKCLNIFNNGIIKKNDLQNLVTDLLGKHSDLMDEFKDFLERCE 388
C+KVKEKLSS++DYQTFLKCLNIF NGIIKKNDLQNLVTDLLGKHSDLM EF DFLERCE
Sbjct: 3 CDKVKEKLSSAEDYQTFLKCLNIFGNGIIKKNDLQNLVTDLLGKHSDLMSEFNDFLERCE 182
Query: 389 NIEGFLAGVMSKKSLSTDAHLSRSSKLEDKDKDQKREMDGAKEKDRYKEKYMGKSIQELD 448
NI+GFLAGVMSKK L+ D HLSRSSKLE DK+ +RE DG KEK+RYKEKYMGKSIQELD
Sbjct: 183 NIDGFLAGVMSKKPLAGDGHLSRSSKLE--DKEHRRETDGGKEKERYKEKYMGKSIQELD 356
Query: 449 LSDCKRCTPSYRLLPSDYPIPTASQRSELGAQVLNDHWV 487
LSDCKRC+PSYRLLP+DYPIPTASQRSELGA VLNDHWV
Sbjct: 357 LSDCKRCSPSYRLLPADYPIPTASQRSELGAHVLNDHWV 473
>TC83407 similar to GP|17385678|dbj|BAB78631. putative co-repressor protein
{Oryza sativa (japonica cultivar-group)}, partial (15%)
Length = 921
Score = 278 bits (712), Expect(2) = 2e-75
Identities = 145/264 (54%), Positives = 188/264 (70%), Gaps = 14/264 (5%)
Frame = +3
Query: 436 KEKYMGKSIQELDLSDCKRCTPSYRLLPSDYPIPTASQRSELGAQVLNDHWVSVTSGSED 495
K+KY+GK I ELDLS+C++CTPSYRLLP +YPIP ASQ++ELGA+VLNDHWVSVTSGSED
Sbjct: 123 KDKYVGKPINELDLSNCEQCTPSYRLLPKNYPIPLASQKTELGAKVLNDHWVSVTSGSED 302
Query: 496 YSFKHMRKNQYEESLFRCEDDRFELDLL------LESVSSASKR--------AEELYNNI 541
YSFKHMRKNQYEES L+L+ ++ V + +E++ +
Sbjct: 303 YSFKHMRKNQYEESXV*MXKTT-GLNLICC*SL*MQQVRKLKRS*KKLMMI*FQEIFQFV 479
Query: 542 NENKISVEALSRIEDHFTVLNLRCIERLYGDHGLDVIDILRKNPTHALPVILTRLKQKQE 601
+ + L + D+ + G DV+++L+KN + ALPVILTRLKQKQE
Sbjct: 480 LRSIYQL*ILGALNDYMVTM------------GFDVMEVLKKNASLALPVILTRLKQKQE 623
Query: 602 EWNRCRSDFNKVWAEIYAKNHYKSLDHRSFYFKQQDSKNLSTKSLVAEIKEIKEKLQKED 661
EW RCR DFNKVWAEIYAKN++KSLDHRSFYFKQQD+K+LSTK+L+ EIKEI E+ +K D
Sbjct: 624 EWARCREDFNKVWAEIYAKNYHKSLDHRSFYFKQQDTKSLSTKALLGEIKEISEQKRKVD 803
Query: 662 HIIQSIAAENRQPLIPHLEFEYSD 685
++ +IAA NR+ ++P+LEFEY D
Sbjct: 804 DVLLAIAAGNRRXILPNLEFEYPD 875
Score = 24.3 bits (51), Expect(2) = 2e-75
Identities = 8/11 (72%), Positives = 11/11 (99%)
Frame = +1
Query: 690 EDLYKLVQYSC 700
EDLY+L++YSC
Sbjct: 889 EDLYQLIKYSC 921
>TC93209 similar to PIR|T51447|T51447 transcription regulator-like protein -
Arabidopsis thaliana, partial (10%)
Length = 721
Score = 266 bits (680), Expect(2) = 5e-73
Identities = 133/155 (85%), Positives = 141/155 (90%), Gaps = 2/155 (1%)
Frame = +3
Query: 977 PETGGDNDADADDEDSENVSEAGEDVSGSESAGDECFQEDHEEDDIEHDDVDGKAESEGE 1036
PE GGDNDADADDEDSENVSEAGEDVSGSESAGDEC +EDHEE+D+EHDDVDGKAESEGE
Sbjct: 96 PEAGGDNDADADDEDSENVSEAGEDVSGSESAGDECSREDHEEEDMEHDDVDGKAESEGE 275
Query: 1037 AEGMCDA--QGGGDSSSLPLSERFLSSVKPLTKHVSAVSFAEEMKDSRVFYGNDDFYALF 1094
AEGMCDA Q G D SSLPLSERFLS+VKPLTKHVSAVSF E++KDSRVFYGNDDF+ LF
Sbjct: 276 AEGMCDADAQTGVDGSSLPLSERFLSTVKPLTKHVSAVSFVEDVKDSRVFYGNDDFFVLF 455
Query: 1095 RLHQILYERILSAKINSMSAEMKWKAKDASSPDPY 1129
RLHQILYERILSAK NS SAE+KWK KDASS D Y
Sbjct: 456 RLHQILYERILSAKENSTSAEIKWKTKDASSTDLY 560
Score = 28.1 bits (61), Expect(2) = 5e-73
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +1
Query: 942 DFVAYRDSNAQSMAKSKHNIERRKY 966
+FVAY DSNAQ S N +RRKY
Sbjct: 1 NFVAYGDSNAQ----SNQNDDRRKY 63
>TC81082 similar to GP|17385678|dbj|BAB78631. putative co-repressor protein
{Oryza sativa (japonica cultivar-group)}, partial (20%)
Length = 1461
Score = 219 bits (559), Expect = 4e-57
Identities = 135/254 (53%), Positives = 163/254 (64%), Gaps = 14/254 (5%)
Frame = +3
Query: 890 PLVEGGDIAAPVPVANGVLVENSKVKSHEESSGP-CKVEKEEGELSPNGDSEED-FVAYR 947
P EGGD A NG + ++V ++E S P K E+EEGELSPNGD EED F Y
Sbjct: 42 PSSEGGDSARLYASTNGAVAGGTEVCRYQEESNPQFKSEREEGELSPNGDFEEDNFAVYG 221
Query: 948 DSNAQSMAKSKHNIERRKYESRDREEECGPETGGDNDADADDEDSENVSEAGE------- 1000
D+ ++++ K +R+Y++R E+ CG E G+N ADADDE E+ + E
Sbjct: 222 DAGSEAVHKGNDGGLKRQYQNRRGEQVCG-EARGENYADADDEGEESPQRSSEGSENASG 398
Query: 1001 --DVSGSESA-GDECFQEDHEEDDIEHDDVDGKAESEGEAEGMCDAQG-GGDSSSLPLSE 1056
DVSGSESA G+EC QE+H DD EHDD KAESEGEAEGM DA GD +SLP SE
Sbjct: 399 NVDVSGSESADGEECSQEEH--DDGEHDD---KAESEGEAEGMADAHDVEGDGTSLPFSE 563
Query: 1057 RFLSSVKPLTKHVSAVSFAEEMKDSRVFYGNDDFYALFRLHQILYERILSAKINSMSAEM 1116
RFL +VKPL KHV V E+ K+SRVFYGND FY L RLHQ LYERI +AK+NS S E
Sbjct: 564 RFLLNVKPLAKHVPPVLHVED-KNSRVFYGNDSFYVLIRLHQTLYERIHAAKVNSSSTER 740
Query: 1117 KWKA-KDASSPDPY 1129
KWKA + SS D Y
Sbjct: 741 KWKASNNTSSTDQY 782
>BF633689 similar to GP|9945050|gb Similar to Arabidopsis chromosome I BAC
genomic sequence (AC002396); unknown protein {Oryza
sativa}, partial (12%)
Length = 398
Score = 194 bits (492), Expect = 2e-49
Identities = 90/133 (67%), Positives = 116/133 (86%)
Frame = +2
Query: 585 PTHALPVILTRLKQKQEEWNRCRSDFNKVWAEIYAKNHYKSLDHRSFYFKQQDSKNLSTK 644
P+ ALPVILTRLKQKQEEW RCR+DF KVWAEIYAKN++KSLDHRSFYFKQQD+++LSTK
Sbjct: 2 PSLALPVILTRLKQKQEEWARCRADFGKVWAEIYAKNYHKSLDHRSFYFKQQDTRSLSTK 181
Query: 645 SLVAEIKEIKEKLQKEDHIIQSIAAENRQPLIPHLEFEYSDGGIHEDLYKLVQYSCEEVF 704
+L+ EIKEI EK KED ++ +IAA NR+P++P+LEFEY D IHEDLY+L++YSC E+
Sbjct: 182 ALLTEIKEISEKKHKEDDVLLAIAAGNRRPILPNLEFEYIDPDIHEDLYRLIKYSCAELC 361
Query: 705 SSKELLNKIMRLW 717
++ E L+K+M++W
Sbjct: 362 TT-EQLDKVMKIW 397
>BE205344 similar to PIR|T00649|T0 hypothetical protein F3I6.12 - Arabidopsis
thaliana, partial (8%)
Length = 559
Score = 176 bits (447), Expect = 3e-44
Identities = 101/163 (61%), Positives = 117/163 (70%), Gaps = 3/163 (1%)
Frame = +2
Query: 1 MKRARDDIYSASASQFKRPFAS-SRGDSYGQSQVPGGGGGGGGAGGGGEATTSQKLTTND 59
MKR RDD++ +S SQ KRP + SRG++ GQ G SQKLTTND
Sbjct: 122 MKRQRDDVFMSS-SQLKRPMLNTSRGEASGQPPNRG----------------SQKLTTND 250
Query: 60 ALSYLKQVKDMFQDQREKYDLFLEVMKDFKAQRTDTAGVIARVKELFKGHNHLIFGFNTF 119
AL+YLK VKD+FQD++EKY+ FLEVMKDFKAQR DT GVI RVKELF+GH LI GFNTF
Sbjct: 251 ALAYLKAVKDIFQDKKEKYEDFLEVMKDFKAQRVDTDGVIERVKELFRGHRDLILGFNTF 430
Query: 120 LPKGYEITL-DEDEAP-AKKTVEFEEAISFVNKIKKRFQSDEH 160
LPKG+EITL EDE P KK VEF+EA+S+VN IK RFQ D H
Sbjct: 431 LPKGHEITLSSEDEQPQPKKKVEFDEAMSYVNTIKTRFQGDVH 559
Score = 47.4 bits (111), Expect = 3e-05
Identities = 20/63 (31%), Positives = 36/63 (56%)
Frame = +2
Query: 143 EAISFVNKIKKRFQSDEHVYKSFLDILNMYRKEHKDIGEVYSEVATLFKDHRDLLEEFTR 202
+A++++ +K FQ + Y+ FL+++ ++ + D V V LF+ HRDL+ F
Sbjct: 248 DALAYLKAVKDIFQDKKEKYEDFLEVMKDFKAQRVDTDGVIERVKELFRGHRDLILGFNT 427
Query: 203 FLP 205
FLP
Sbjct: 428 FLP 436
>BF648188 similar to GP|21903805|gb| hypothetical protein {Streptococcus
pyogenes MGAS315}, partial (17%)
Length = 627
Score = 99.4 bits (246), Expect = 7e-21
Identities = 60/143 (41%), Positives = 77/143 (52%)
Frame = +3
Query: 58 NDALSYLKQVKDMFQDQREKYDLFLEVMKDFKAQRTDTAGVIARVKELFKGHNHLIFGFN 117
+DA +Y VK Q EKY F EVM D++ R D GV ARV ELFKGH HLI G N
Sbjct: 213 DDACAYDNAVKSTCQ---EKYSEFAEVMSDYRDGRIDPGGVKARVHELFKGHKHLILGIN 383
Query: 118 TFLPKGYEITLDEDEAPAKKTVEFEEAISFVNKIKKRFQSDEHVYKSFLDILNMYRKEHK 177
+PK YEI L P+ + V ++A +F+ ++K FQ Y FL +++ Y
Sbjct: 384 NIMPKNYEIIL----PPSDEKVNRQDATTFLKQVKVVFQDKMEKYYEFLQVIHDYMNLTI 551
Query: 178 DIGEVYSEVATLFKDHRDLLEEF 200
DI +V LFK H DLL F
Sbjct: 552 DILDVIEIGMKLFKGHVDLLSGF 620
Score = 58.2 bits (139), Expect = 2e-08
Identities = 30/67 (44%), Positives = 42/67 (61%)
Frame = +3
Query: 51 TSQKLTTNDALSYLKQVKDMFQDQREKYDLFLEVMKDFKAQRTDTAGVIARVKELFKGHN 110
+ +K+ DA ++LKQVK +FQD+ EKY FL+V+ D+ D VI +LFKGH
Sbjct: 423 SDEKVNRQDATTFLKQVKVVFQDKMEKYYEFLQVIHDYMNLTIDILDVIEIGMKLFKGHV 602
Query: 111 HLIFGFN 117
L+ GFN
Sbjct: 603 DLLSGFN 623
>BE326062 similar to GP|17385678|db putative co-repressor protein {Oryza
sativa (japonica cultivar-group)}, partial (1%)
Length = 632
Score = 83.2 bits (204), Expect(2) = 7e-19
Identities = 52/145 (35%), Positives = 76/145 (51%), Gaps = 16/145 (11%)
Frame = +2
Query: 256 RDRDLSVEHPEMDDDKTMINLHKEQRKRDRRIRDQDERDPDLDNSRDLTSQRFRDKKKTV 315
+D D E + + M + R RR R++D RD + D RD +R K+K+
Sbjct: 2 QDHDGGSLRAEKERKRRMEKEKDRKEDRGRRERERDYRDYEHDRGRD--RERLSHKRKSD 175
Query: 316 KKAE--------------GMYGEAFSFCEKVKEKLSSSDDYQTFLKCLNIFNNGIIKKND 361
KAE G + +FC+KVKE+L + DYQ FLKC++I+N II + +
Sbjct: 176 HKAEDSGAEPLLDADQNFGTQNQELAFCDKVKERLQNPGDYQEFLKCVHIYNKEIITRQE 355
Query: 362 LQNLV--TDLLGKHSDLMDEFKDFL 384
LQ+LV LLG + DLM+ F +FL
Sbjct: 356 LQSLVGGCGLLGDYPDLMESFNEFL 430
Score = 30.0 bits (66), Expect(2) = 7e-19
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = +3
Query: 384 LERCENIEGFLAGVMSKKSLSTDAHLSRSSKLEDKDKDQ 422
L+ +N GFLAGVM++KSL + + E +D+D+
Sbjct: 432 LQAEKNGGGFLAGVMNRKSLWIEGRGLKPMNAEQRDRDR 548
>TC84375 similar to GP|17385678|dbj|BAB78631. putative co-repressor protein
{Oryza sativa (japonica cultivar-group)}, partial (10%)
Length = 587
Score = 85.1 bits (209), Expect = 1e-16
Identities = 46/75 (61%), Positives = 54/75 (71%), Gaps = 1/75 (1%)
Frame = +3
Query: 1056 ERFLSSVKPLTKHVSAVSFAEEMKDSRVFYGNDDFYALFRLHQILYERILSAKINSMSAE 1115
E FL + KPL K+VS V +E ++ ++FYGND FY LFRLHQ LYERI SAKINS SAE
Sbjct: 3 EGFLLTAKPLVKYVSPVFHGKE-ENVQIFYGNDAFYVLFRLHQTLYERIRSAKINSSSAE 179
Query: 1116 MKWKA-KDASSPDPY 1129
KW+A D SS D Y
Sbjct: 180 KKWRASNDTSSTDRY 224
>TC93631 similar to EGAD|119721|127958 hypothetical protein F54D1.6
{Caenorhabditis elegans}, partial (1%)
Length = 1081
Score = 74.3 bits (181), Expect = 2e-13
Identities = 38/92 (41%), Positives = 55/92 (59%)
Frame = +1
Query: 321 MYGEAFSFCEKVKEKLSSSDDYQTFLKCLNIFNNGIIKKNDLQNLVTDLLGKHSDLMDEF 380
M+ E F EKVKEK S+ + YQ FLKCL+I+ +I + +LQ LV DL GK++DLM EF
Sbjct: 682 MFREEHVFLEKVKEKFSNPEIYQDFLKCLHIYARELITRGELQLLVYDLFGKYTDLMVEF 861
Query: 381 KDFLERCENIEGFLAGVMSKKSLSTDAHLSRS 412
DF+ + E L + + + L++S
Sbjct: 862 NDFMAQSEKKNAKLVKALKGRQIHASVSLNQS 957
Score = 38.9 bits (89), Expect = 0.011
Identities = 35/124 (28%), Positives = 57/124 (45%), Gaps = 8/124 (6%)
Frame = +2
Query: 257 DRDLSVEHPEMDDDKTMINLH-KEQRKRDRRIRDQDERD-------PDLDNSRDLTSQRF 308
D DL ++ + + +K +++ + R D I + RD P++D +++
Sbjct: 227 DHDLIAKNLDPEFNKGLMSAEVSDGRNSDMTIHKKGNRDLIVEHPDPEIDKG-SMSANEK 403
Query: 309 RDKKKTVKKAEGMYGEAFSFCEKVKEKLSSSDDYQTFLKCLNIFNNGIIKKNDLQNLVTD 368
RD+KK M EAFS+ KV E+L +DYQ F + NG N+LQ T
Sbjct: 404 RDEKKECHTV--MSSEAFSYLNKVTERLGILEDYQKF*EVPT*LQNG----NNLQGERTT 565
Query: 369 LLGK 372
G+
Sbjct: 566 KNGR 577
Score = 34.7 bits (78), Expect = 0.21
Identities = 18/36 (50%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Frame = +3
Query: 343 QTFLKCLNIFNNGII-KKNDLQNLVTDLLGKHSDLM 377
+ F K L+ + G I K+ +LQ +V DLLGKHSDL+
Sbjct: 501 KNFEKSLHSYRMGTIYKEKELQKMVGDLLGKHSDLV 608
>AW693766 similar to GP|16611746|gb| putative glycosyl transferase {Shigella
boydii}, partial (5%)
Length = 656
Score = 52.8 bits (125), Expect = 8e-07
Identities = 28/75 (37%), Positives = 44/75 (58%), Gaps = 7/75 (9%)
Frame = +1
Query: 61 LSYLKQVKDMFQDQREKYDLFLE-------VMKDFKAQRTDTAGVIARVKELFKGHNHLI 113
L ++++VK +F +RE+Y+ F++ +M D + R R+K+L KGHN LI
Sbjct: 55 LGFVEEVKSVFHGKREEYEEFIKDIDAFKTLMNDHRITRLPVQNFKGRMKKLLKGHNRLI 234
Query: 114 FGFNTFLPKGYEITL 128
FGFN ++ K ITL
Sbjct: 235 FGFNAYM-KDRRITL 276
>TC86473 similar to PIR|E84828|E84828 probable WD-40 repeat protein [imported]
- Arabidopsis thaliana, partial (68%)
Length = 2654
Score = 44.7 bits (104), Expect = 2e-04
Identities = 32/118 (27%), Positives = 54/118 (45%), Gaps = 18/118 (15%)
Frame = +2
Query: 953 SMAKSKHNIERRKYESRDREEECGPETGGDNDADADDEDSENVSEAGEDVSGSE---SAG 1009
S K K +E + + E+E P D+D D+DD+DS++ E + S SE S+
Sbjct: 29 STMKKKTVVESEMKKKKSNEKEEAPPPPSDHD-DSDDDDSDDSVEVSDYDSISEDEDSSA 205
Query: 1010 DECFQEDHEEDDIE---------------HDDVDGKAESEGEAEGMCDAQGGGDSSSL 1052
D +D + D + H + ++S+ E E + D++GG +SS L
Sbjct: 206 DSIDDDDSSDSDSDSKSELEDEEGASPTTHHNASDDSDSQDEEEDVVDSEGGSESSDL 379
Score = 40.0 bits (92), Expect = 0.005
Identities = 36/129 (27%), Positives = 57/129 (43%), Gaps = 4/129 (3%)
Frame = +2
Query: 927 EKEEGELSPNG--DSEEDFVAYRDSNAQSMAKSKHNIERRKYESRDREEECGPETGGDND 984
EKEE P+ DS++D S ++E Y+S +E+ ++ D+D
Sbjct: 86 EKEEAPPPPSDHDDSDDD-------------DSDDSVEVSDYDSISEDEDSSADSIDDDD 226
Query: 985 ADADDEDSENVSEAGEDVSGS--ESAGDECFQEDHEEDDIEHDDVDGKAESEGEAEGMCD 1042
+ D DS++ E E S + +A D+ +D EED + D G S+ EG
Sbjct: 227 SSDSDSDSKSELEDEEGASPTTHHNASDDSDSQDEEEDVV--DSEGGSESSDLHQEG--- 391
Query: 1043 AQGGGDSSS 1051
GG +S S
Sbjct: 392 --GGAESDS 412
Score = 30.0 bits (66), Expect = 5.3
Identities = 33/124 (26%), Positives = 50/124 (39%), Gaps = 11/124 (8%)
Frame = +2
Query: 910 ENSKVKSHEESSGPCKVEKEEGELSPNGDSEEDFVAY------RDSNAQSMAK--SKHNI 961
E K KS+E+ P + + D + Y DS+A S+ S +
Sbjct: 62 EMKKKKSNEKEEAPPPPSDHDDSDDDDSDDSVEVSDYDSISEDEDSSADSIDDDDSSDSD 241
Query: 962 ERRKYESRDREEECGPET--GGDNDADADDEDSENV-SEAGEDVSGSESAGDECFQEDHE 1018
K E D EE P T +D+D+ DE+ + V SE G + S G + D
Sbjct: 242 SDSKSELED-EEGASPTTHHNASDDSDSQDEEEDVVDSEGGSESSDLHQEGGGA-ESDSS 415
Query: 1019 EDDI 1022
ED++
Sbjct: 416 EDEV 427
>AW690594 similar to GP|23498163|emb hypothetical protein {Plasmodium
falciparum 3D7}, partial (10%)
Length = 633
Score = 43.9 bits (102), Expect = 4e-04
Identities = 22/81 (27%), Positives = 43/81 (52%)
Frame = +3
Query: 954 MAKSKHNIERRKYESRDREEECGPETGGDNDADADDEDSENVSEAGEDVSGSESAGDECF 1013
M ++ + +RRK E + EE+ G +++ D ++ED + E E+ E D+
Sbjct: 6 MTMAESSWKRRKVEEHNEEEDEGEVEEEEDEHDEEEEDEHDEEEEEEEEEEEEDEHDDEE 185
Query: 1014 QEDHEEDDIEHDDVDGKAESE 1034
+E+ EE++ E +D D + E +
Sbjct: 186 EEEEEEEEEEEEDDDEEGEED 248
Score = 34.7 bits (78), Expect = 0.21
Identities = 20/84 (23%), Positives = 39/84 (45%)
Frame = +3
Query: 913 KVKSHEESSGPCKVEKEEGELSPNGDSEEDFVAYRDSNAQSMAKSKHNIERRKYESRDRE 972
KV+ H E +VE+EE E + E D + + + +H+ E + E + E
Sbjct: 39 KVEEHNEEEDEGEVEEEEDEHDEEEEDEHD--EEEEEEEEEEEEDEHDDEEEEEEEEEEE 212
Query: 973 EECGPETGGDNDADADDEDSENVS 996
EE D+D + ++++ + +S
Sbjct: 213 EE------EDDDEEGEEDEIDRIS 266
>TC82935 similar to GP|15150635|gb|AAK85442.1 Hypothetical protein C07H6.4
{Caenorhabditis elegans}, partial (2%)
Length = 807
Score = 42.4 bits (98), Expect = 0.001
Identities = 56/224 (25%), Positives = 85/224 (37%), Gaps = 29/224 (12%)
Frame = +3
Query: 248 RDRLPSHDRDRDLSVEHPEMDDDKTMINL--------------------------HKEQR 281
RD DRDR VEH + DD+ ++ H+E
Sbjct: 144 RDGSRDRDRDRSRRVEHLQGYDDQARESMLDRDGSRDRDIMVRDRRVEHLQDYDDHRESM 323
Query: 282 KRDRRIRDQDERDPDLDNSRDLTSQRFRDKKKTV---KKAEGMYGEAFSFCEKVKEKLSS 338
D R RD D + +L+NSR +D+ V KK + + SF E KE+
Sbjct: 324 LDDDRNRDGDRAENELENSRVQGGDVDKDRTLDVDPDKKNDRISDPDKSFDEHKKEQPRR 503
Query: 339 SDDYQTFLKCLNIFNNGIIKKNDLQNLVTDLLGKHSDLMDEFKDFLERCENIEGFLAGVM 398
+ D LN+ N QN +D G H+ DE +D LER + L +
Sbjct: 504 NID-------LNVTN---------QNSPSDSNGDHN---DEVEDELERSIQLLDQLKKEV 626
Query: 399 SKKSLSTDAHLSRSSKLEDKDKDQKREMDGAKEKDRYKEKYMGK 442
SK + +L+ K + + AK+K Y++ + K
Sbjct: 627 SKLEEGLEERRLNVMELQKHSKKMEDAVITAKKKSLYRQMQLTK 758
Score = 35.4 bits (80), Expect = 0.13
Identities = 30/117 (25%), Positives = 49/117 (41%)
Frame = +3
Query: 248 RDRLPSHDRDRDLSVEHPEMDDDKTMINLHKEQRKRDRRIRDQDERDPDLDNSRDLTSQR 307
RDR DRDR + VEH + DD+ ++ RDR RD+ R L D +
Sbjct: 51 RDRSRDRDRDRGIKVEHLQDYDDQARESMLDRDGSRDRD-RDRSRRVEHLQGYDDQARES 227
Query: 308 FRDKKKTVKKAEGMYGEAFSFCEKVKEKLSSSDDYQTFLKCLNIFNNGIIKKNDLQN 364
D+ +G ++ E L DD++ + + +G +N+L+N
Sbjct: 228 MLDR-------DGSRDRDIMVRDRRVEHLQDYDDHRESMLDDDRNRDGDRAENELEN 377
>TC89427 weakly similar to GP|4557063|gb|AAD22502.1| expressed protein
{Arabidopsis thaliana}, partial (50%)
Length = 753
Score = 42.4 bits (98), Expect = 0.001
Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 7/92 (7%)
Frame = +1
Query: 954 MAKSKHNIERRK--YESRDREEECGPETGGDNDADAD-----DEDSENVSEAGEDVSGSE 1006
++K H E K E+ D ++E + D D D D DED E+ + V
Sbjct: 259 LSKGNHTCEENKDGSETEDDDDEDDDDDVNDEDDDNDEDFSGDEDDEDADPEDDPVPNGA 438
Query: 1007 SAGDECFQEDHEEDDIEHDDVDGKAESEGEAE 1038
D+ +D ++DD + D+ DG+ E E E E
Sbjct: 439 GGSDD---DDEDDDDDDDDNDDGEDEDEDEEE 525
Score = 37.0 bits (84), Expect = 0.043
Identities = 28/101 (27%), Positives = 43/101 (41%), Gaps = 1/101 (0%)
Frame = +1
Query: 924 CKVEKEEGELSPNGDSEEDFVAYRDSNAQSMAKSKHNIERRKYESRDREEECGPE-TGGD 982
C+ K+ E + D ++D D N + + E D E++ P GG
Sbjct: 280 CEENKDGSETEDDDDEDDD----DDVNDEDDDNDEDFSGDEDDEDADPEDDPVPNGAGGS 447
Query: 983 NDADADDEDSENVSEAGEDVSGSESAGDECFQEDHEEDDIE 1023
+D D DD+D ++ ++ GED ED EEDD E
Sbjct: 448 DDDDEDDDDDDDDNDDGEDE-----------DEDEEEDDDE 537
>TC80893 similar to GP|4557063|gb|AAD22502.1| expressed protein {Arabidopsis
thaliana}, partial (39%)
Length = 883
Score = 40.4 bits (93), Expect = 0.004
Identities = 25/87 (28%), Positives = 37/87 (41%), Gaps = 11/87 (12%)
Frame = +3
Query: 978 ETGGDNDADADDEDSENVSEAGEDVSGSESAGDECFQEDHEEDDI-----------EHDD 1026
E D + D DD+D ++V + +D + +GDE +E EDD E DD
Sbjct: 306 ENKSDTEDDEDDDDDDDVQDEDDDGEEEDYSGDEGEEEGDPEDDPEANGAGGSDDGEDDD 485
Query: 1027 VDGKAESEGEAEGMCDAQGGGDSSSLP 1053
DG E E + E D + + P
Sbjct: 486 DDGDEEDEEDGEDEEDEEDEEEDDETP 566
Score = 35.8 bits (81), Expect = 0.096
Identities = 18/60 (30%), Positives = 30/60 (50%)
Frame = +3
Query: 967 ESRDREEECGPETGGDNDADADDEDSENVSEAGEDVSGSESAGDECFQEDHEEDDIEHDD 1026
E D EEE G+ + D +D+ N + +D + GDE +ED E+++ E D+
Sbjct: 366 EDDDGEEEDYSGDEGEEEGDPEDDPEANGAGGSDDGEDDDDDGDEEDEEDGEDEEDEEDE 545
Score = 33.9 bits (76), Expect = 0.37
Identities = 28/92 (30%), Positives = 37/92 (39%), Gaps = 8/92 (8%)
Frame = +3
Query: 938 DSEEDFVAYRDSNAQSMAKSKHNIERRKYESRDREEECGPET--------GGDNDADADD 989
D+E+D D + + + E Y + EEE PE G D+ D DD
Sbjct: 318 DTEDD---EDDDDDDDVQDEDDDGEEEDYSGDEGEEEGDPEDDPEANGAGGSDDGEDDDD 488
Query: 990 EDSENVSEAGEDVSGSESAGDECFQEDHEEDD 1021
+ E E GE DE +ED EEDD
Sbjct: 489 DGDEEDEEDGE---------DEEDEEDEEEDD 557
>TC83625 similar to GP|8096269|dbj|BAA95789.1 KED {Nicotiana tabacum}, partial
(9%)
Length = 908
Score = 40.0 bits (92), Expect = 0.005
Identities = 35/135 (25%), Positives = 60/135 (43%), Gaps = 6/135 (4%)
Frame = +2
Query: 918 EESSGPCKVEKEEGELSPNGDSEEDFVAY-RDSNAQSMAKSKHNIERRKYESRDREEECG 976
EES+ P K++ + GD +ED V +D +S+ K E++ E +D+ +
Sbjct: 461 EESNIPIKIDDKSA-----GDVKEDKVEIEKDLEIKSVEKDDEKKEKKDKEKKDKTDVDE 625
Query: 977 PETGGDNDADADDEDSENVSEAGEDVSGSESAGDECFQEDHEEDDIEHDDVDG-----KA 1031
+ D + ++ ENV GE+ G E E +++ +E E D DG K
Sbjct: 626 GKDKKDKEKKKKEKKEENVK--GEEEDGDEKKDKEKKKKEKKEKGKEDKDKDGEEKKSKK 799
Query: 1032 ESEGEAEGMCDAQGG 1046
+ E + + D GG
Sbjct: 800 DKEKKKDKNEDDDGG 844
>TC80288 weakly similar to PIR|T06029|T06029 hypothetical protein T28I19.100 -
Arabidopsis thaliana, partial (14%)
Length = 1460
Score = 40.0 bits (92), Expect = 0.005
Identities = 40/180 (22%), Positives = 71/180 (39%), Gaps = 3/180 (1%)
Frame = +3
Query: 915 KSHEESSGPCKVEKEEGELSPNGDSEEDFVAYRDSNAQSMAKSKHNIE---RRKYESRDR 971
+ H+E + E EEG + ED V R Q ++KH E + +S +
Sbjct: 450 REHDEQ----QQEGEEGNKHETEEESEDNVHERREE-QDEEENKHGAEVQEENESKSEEV 614
Query: 972 EEECGPETGGDNDADADDEDSENVSEAGEDVSGSESAGDECFQEDHEEDDIEHDDVDGKA 1031
E+E G +ND + + D++ E ++ E GD ++ E +D E ++ G
Sbjct: 615 EDEGGDVEIDENDHEKSEADNDREDEVVDEEKDKEEEGD----DETENEDKEDEEKGGLV 782
Query: 1032 ESEGEAEGMCDAQGGGDSSSLPLSERFLSSVKPLTKHVSAVSFAEEMKDSRVFYGNDDFY 1091
E+ E + D+SS + +S + S +S K +D+ Y
Sbjct: 783 ENHENHEAREEHYKADDASSAVAHDTHETSTETGNLEHSDLSLQNTRKPENETNHSDESY 962
>TC81816 similar to GP|8096269|dbj|BAA95789.1 KED {Nicotiana tabacum}, partial
(13%)
Length = 663
Score = 40.0 bits (92), Expect = 0.005
Identities = 36/139 (25%), Positives = 61/139 (42%), Gaps = 6/139 (4%)
Frame = +3
Query: 918 EESSGPCKVEKEEGELSPNGDSEEDFVAY-RDSNAQSMAKSKHNIERRKYESRDREEECG 976
EES+ P K++ + GD +ED V +D +S+ K E++ E +D+ +
Sbjct: 69 EESNIPIKIDDKSA-----GDVKEDKVEIEKDLEIKSVEKDDEKKEKKDKEKKDKTDVDE 233
Query: 977 PETGGDNDADADDEDSENVSEAGEDVSGSESAGDECFQEDHEEDDIEHDDVDG-----KA 1031
+ D + ++ ENV GE+ G E E +++ +E E D DG K
Sbjct: 234 GKDKKDKEKKKKEKKEENVK--GEEEDGDEKKDKEKKKKEKKEKGKEDKDKDGEEKKSKK 407
Query: 1032 ESEGEAEGMCDAQGGGDSS 1050
+ E + + D G D S
Sbjct: 408 DKEKKKDKNEDDDEGEDGS 464
Score = 30.0 bits (66), Expect = 5.3
Identities = 25/119 (21%), Positives = 49/119 (41%)
Frame = +3
Query: 910 ENSKVKSHEESSGPCKVEKEEGELSPNGDSEEDFVAYRDSNAQSMAKSKHNIERRKYESR 969
E K E+ K E +GE +GD ++D + + + K K +
Sbjct: 231 EGKDKKDKEKKKKEKKEENVKGE-EEDGDEKKDKEKKKKEKKEKGKEDKDKDGEEKKSKK 407
Query: 970 DREEECGPETGGDNDADADDEDSENVSEAGEDVSGSESAGDECFQEDHEEDDIEHDDVD 1028
D+E++ D + DD++ E+ S+ ++ E +E ++ EE + D+D
Sbjct: 408 DKEKK--------KDKNEDDDEGEDGSKKKKNKDKKEKKKEE---DEKEEGKVSVRDID 551
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.312 0.131 0.369
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,419,484
Number of Sequences: 36976
Number of extensions: 383911
Number of successful extensions: 6690
Number of sequences better than 10.0: 183
Number of HSP's better than 10.0 without gapping: 2710
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4769
length of query: 1129
length of database: 9,014,727
effective HSP length: 106
effective length of query: 1023
effective length of database: 5,095,271
effective search space: 5212462233
effective search space used: 5212462233
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 64 (29.3 bits)
Lotus: description of TM0081b.6