BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0076a.6
(123 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC89877 similar to GP|19913862|gb|AAM03563.1 conserved hypotheti... 111 8e-26
TC81117 similar to GP|21554811|gb|AAM63698.1 unknown {Arabidopsi... 107 9e-25
TC77814 similar to GP|21554811|gb|AAM63698.1 unknown {Arabidopsi... 47 2e-06
TC76449 similar to GP|9293996|dbj|BAB01899.1 gene_id:MFD22.1~unk... 42 7e-06
CA990978 weakly similar to GP|12002863|gb|A self-pruning interac... 44 2e-05
AW690594 similar to GP|23498163|emb hypothetical protein {Plasmo... 39 4e-04
TC90135 weakly similar to GP|9293996|dbj|BAB01899.1 gene_id:MFD2... 39 5e-04
TC77387 similar to GP|15983396|gb|AAL11566.1 At1g51440/F5D21_19 ... 38 0.001
TC93132 36 0.004
TC86635 weakly similar to GP|9758600|dbj|BAB09233.1 gene_id:MDF2... 35 0.009
CB891684 similar to GP|22450578|gb| hypothetical protein {Oryza ... 34 0.012
TC93240 weakly similar to GP|14335170|gb|AAK59865.1 AT5g51070/K3... 34 0.012
BE204345 similar to GP|15126717|gb| Similar to ectoplacental con... 34 0.016
TC88509 similar to PIR|T01826|T01826 microfibril-associated prot... 33 0.021
BG586394 similar to GP|7295463|gb| CG4835 gene product {Drosophi... 33 0.028
TC91327 similar to GP|22597168|gb|AAN03471.1 unknown protein {Gl... 33 0.028
TC87847 similar to GP|15929245|gb|AAH15068.1 Similar to adaptor-... 33 0.028
TC87846 similar to GP|5821151|dbj|BAA83717.1 RNA binding protein... 33 0.028
TC79394 weakly similar to PIR|T49019|T49019 probable RNA binding... 33 0.028
TC90584 similar to GP|22136810|gb|AAM91749.1 unknown protein {Ar... 33 0.036
>TC89877 similar to GP|19913862|gb|AAM03563.1 conserved hypothetical protein
{Methanosarcina acetivorans str. C2A}, partial (4%)
Length = 946
Score = 111 bits (277), Expect = 8e-26
Identities = 72/128 (56%), Positives = 85/128 (66%), Gaps = 6/128 (4%)
Frame = -1
Query: 1 MGFSEKSQQVEERGVES--ESRKWVITGIALRRPL--KPIYTTTPVEKTEQHEEEEEEEE 56
MG + QVE VE+ ++RKWVI LR PL KPI+T P+EK++Q
Sbjct: 679 MGLLSDNSQVEGGLVENSEKNRKWVIN---LRTPLNLKPIHTI-PLEKSKQ--------- 539
Query: 57 EETFMEEEEEECSTTPKGEEARIPATLKCPPPPRKPKPSLKCNFRG--GEFFTPPDLEAV 114
EE+ MEEE CSTTP+GE +RIP TL CPP PRK K SLK N+RG EFFTPP+LE V
Sbjct: 538 EESGMEEE---CSTTPRGEGSRIPTTLICPPAPRKRKASLKWNYRGKAREFFTPPELETV 368
Query: 115 FIRHVERA 122
FIRHVERA
Sbjct: 367 FIRHVERA 344
>TC81117 similar to GP|21554811|gb|AAM63698.1 unknown {Arabidopsis
thaliana}, partial (13%)
Length = 669
Score = 107 bits (268), Expect = 9e-25
Identities = 65/117 (55%), Positives = 75/117 (63%), Gaps = 6/117 (5%)
Frame = +3
Query: 13 RGVESE--SRKWVITGIALRRPLKPIYTTTPVEKTEQHEEEEEEEEEETFMEEEEEECST 70
+G ESE SRKWVI GIALR PLKPI T + +EK +Q EE +E E EECS
Sbjct: 165 QGFESENNSRKWVIAGIALRAPLKPIQTNS-IEKEQQKEE----------VEIEIEECS- 308
Query: 71 TPKGEEARIPATLKCPPPPRKPKPSLKCNFRGG----EFFTPPDLEAVFIRHVERAN 123
TP EE++IP + CPP PRK K SLK N++ EFF PDLE VFIRHVE AN
Sbjct: 309 TPTNEESKIPTSFTCPPAPRKQKSSLKWNYQSSGVVREFFKAPDLENVFIRHVESAN 479
>TC77814 similar to GP|21554811|gb|AAM63698.1 unknown {Arabidopsis
thaliana}, partial (18%)
Length = 812
Score = 46.6 bits (109), Expect = 2e-06
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 6/72 (8%)
Frame = +1
Query: 50 EEEEEEEEETFMEEEEEECSTTPKGEEARIPATLKCPPPPRKPKPSLKC------NFRGG 103
E E+E + ++ E +E TP +E++IP CPP PRKPKP + C +F+
Sbjct: 235 EIEKENVDGAVVDGEIDESYRTPTSKESKIPEIHDCPPAPRKPKPFVSCKRKLMDDFQFF 414
Query: 104 EFFTPPDLEAVF 115
E D++A F
Sbjct: 415 EVKNNEDMDAFF 450
>TC76449 similar to GP|9293996|dbj|BAB01899.1 gene_id:MFD22.1~unknown
protein {Arabidopsis thaliana}, partial (24%)
Length = 1154
Score = 42.0 bits (97), Expect(2) = 7e-06
Identities = 20/72 (27%), Positives = 35/72 (47%), Gaps = 3/72 (4%)
Frame = +3
Query: 33 LKPIYTTTPVEKTEQHEEEEEEEEEETFME---EEEEECSTTPKGEEARIPATLKCPPPP 89
+ + ++ + KT Q +EE+ E ++ +TPKG++ RIP CPP P
Sbjct: 882 INKVLPSSCLPKTSQESSKEEKTEISEVIDVSNSNNNSACSTPKGQKYRIPEISTCPPAP 1061
Query: 90 RKPKPSLKCNFR 101
+K + C+ R
Sbjct: 1062KKQRVVSNCSLR 1097
Score = 22.3 bits (46), Expect(2) = 7e-06
Identities = 8/12 (66%), Positives = 9/12 (74%)
Frame = +1
Query: 105 FFTPPDLEAVFI 116
FF PPDLE F+
Sbjct: 1114 FFVPPDLEHFFL 1149
>CA990978 weakly similar to GP|12002863|gb|A self-pruning interacting protein
1 {Lycopersicon esculentum}, partial (24%)
Length = 657
Score = 43.9 bits (102), Expect = 2e-05
Identities = 25/59 (42%), Positives = 32/59 (53%), Gaps = 7/59 (11%)
Frame = +2
Query: 44 KTEQHEEEEEEE-------EEETFMEEEEEECSTTPKGEEARIPATLKCPPPPRKPKPS 95
K E+ E+EEEEE + E + EE EEC T P +IP KCPP P+K + S
Sbjct: 182 KQEKREQEEEEEANIPKPIQVEEVIFEELEECKT-PTSSSNKIPIVEKCPPAPKKKRKS 355
>AW690594 similar to GP|23498163|emb hypothetical protein {Plasmodium
falciparum 3D7}, partial (10%)
Length = 633
Score = 39.3 bits (90), Expect = 4e-04
Identities = 20/46 (43%), Positives = 26/46 (56%)
Frame = +3
Query: 43 EKTEQHEEEEEEEEEETFMEEEEEECSTTPKGEEARIPATLKCPPP 88
E+ E+ E+E ++EEEE EEEEEE +GEE I P P
Sbjct: 144 EEEEEEEDEHDDEEEEEEEEEEEEEEDDDEEGEEDEIDRISTLPDP 281
Score = 34.3 bits (77), Expect = 0.012
Identities = 14/25 (56%), Positives = 20/25 (80%)
Frame = +3
Query: 43 EKTEQHEEEEEEEEEETFMEEEEEE 67
E+ ++H+EEEE+E +E EEEEEE
Sbjct: 84 EEEDEHDEEEEDEHDEEEEEEEEEE 158
Score = 32.7 bits (73), Expect = 0.036
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = +3
Query: 43 EKTEQHEEEEEEEEEETFMEEEEEECSTTPKGEE 76
E E+ E+E +EEEEE EEEE+E + EE
Sbjct: 96 EHDEEEEDEHDEEEEEEEEEEEEDEHDDEEEEEE 197
Score = 32.3 bits (72), Expect = 0.047
Identities = 15/25 (60%), Positives = 18/25 (72%)
Frame = +3
Query: 43 EKTEQHEEEEEEEEEETFMEEEEEE 67
E+ E EEEE+E +EE EEEEEE
Sbjct: 87 EEDEHDEEEEDEHDEEEEEEEEEEE 161
Score = 31.2 bits (69), Expect = 0.10
Identities = 17/37 (45%), Positives = 22/37 (58%), Gaps = 4/37 (10%)
Frame = +3
Query: 44 KTEQHEEEEEE----EEEETFMEEEEEECSTTPKGEE 76
K E+H EEE+E EEE+ EEEE+E + EE
Sbjct: 39 KVEEHNEEEDEGEVEEEEDEHDEEEEDEHDEEEEEEE 149
Score = 31.2 bits (69), Expect = 0.10
Identities = 13/24 (54%), Positives = 18/24 (74%)
Frame = +3
Query: 44 KTEQHEEEEEEEEEETFMEEEEEE 67
+ E+ E+E +EEEE+ EEEEEE
Sbjct: 75 EVEEEEDEHDEEEEDEHDEEEEEE 146
Score = 31.2 bits (69), Expect = 0.10
Identities = 14/26 (53%), Positives = 18/26 (68%)
Frame = +3
Query: 42 VEKTEQHEEEEEEEEEETFMEEEEEE 67
VE+ E +EEEE+E + EEEEEE
Sbjct: 78 VEEEEDEHDEEEEDEHDEEEEEEEEE 155
Score = 30.8 bits (68), Expect = 0.14
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +3
Query: 43 EKTEQHEEEEEEEEEETFMEEEEEE 67
E E+ +E +EEEE+E EEEEEE
Sbjct: 75 EVEEEEDEHDEEEEDEHDEEEEEEE 149
Score = 26.6 bits (57), Expect = 2.6
Identities = 14/31 (45%), Positives = 18/31 (57%)
Frame = +3
Query: 46 EQHEEEEEEEEEETFMEEEEEECSTTPKGEE 76
E+ E E EEEE+E EEE+E + EE
Sbjct: 60 EEDEGEVEEEEDEHDEEEEDEHDEEEEEEEE 152
Score = 26.2 bits (56), Expect = 3.4
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +3
Query: 49 EEEEEEEEEETFMEEEEEECSTTPKGEE 76
EEEE+E +EE E +EEE + EE
Sbjct: 81 EEEEDEHDEEEEDEHDEEEEEEEEEEEE 164
>TC90135 weakly similar to GP|9293996|dbj|BAB01899.1 gene_id:MFD22.1~unknown
protein {Arabidopsis thaliana}, partial (28%)
Length = 690
Score = 38.9 bits (89), Expect = 5e-04
Identities = 19/43 (44%), Positives = 25/43 (57%)
Frame = +3
Query: 70 TTPKGEEARIPATLKCPPPPRKPKPSLKCNFRGGEFFTPPDLE 112
+TPKG++ RIP CPP P+K + + R FF PDLE
Sbjct: 249 STPKGKKFRIPEISTCPPAPKKQRVLSNFSLR-RSFFATPDLE 374
>TC77387 similar to GP|15983396|gb|AAL11566.1 At1g51440/F5D21_19
{Arabidopsis thaliana}, partial (75%)
Length = 1793
Score = 37.7 bits (86), Expect = 0.001
Identities = 18/33 (54%), Positives = 22/33 (66%)
Frame = +3
Query: 43 EKTEQHEEEEEEEEEETFMEEEEEECSTTPKGE 75
E+ E+ EEE+E+EEEE EEEEEE P E
Sbjct: 324 EEEEEEEEEDEDEEEEEEEEEEEEESPLPPLSE 422
Score = 37.0 bits (84), Expect = 0.002
Identities = 18/35 (51%), Positives = 23/35 (65%)
Frame = +3
Query: 38 TTTPVEKTEQHEEEEEEEEEETFMEEEEEECSTTP 72
T + + E+ EEEE+E+EEE EEEEEE S P
Sbjct: 306 TMNQLHEEEEEEEEEDEDEEEEEEEEEEEEESPLP 410
Score = 33.9 bits (76), Expect = 0.016
Identities = 19/48 (39%), Positives = 30/48 (61%)
Frame = +3
Query: 33 LKPIYTTTPVEKTEQHEEEEEEEEEETFMEEEEEECSTTPKGEEARIP 80
LK +++ + + + EEEEEEE+E+ EEEEEE + EE+ +P
Sbjct: 282 LKCSSSSSTMNQLHEEEEEEEEEDEDEEEEEEEEE-----EEEESPLP 410
>TC93132
Length = 638
Score = 35.8 bits (81), Expect = 0.004
Identities = 30/100 (30%), Positives = 42/100 (42%), Gaps = 10/100 (10%)
Frame = +3
Query: 27 IALRRPLKPIYTTTPVEKTEQHEEEEE---EEEEETFMEEEEEECSTTPKGEEARIPATL 83
I R P I+TT QH EE+E + E ++EEE TP ++ L
Sbjct: 111 IKQRVPQARIFTTL-----NQHTEEKEVSSDLERRKEVQEEEHYYYHTPPTSPSKNSFDL 275
Query: 84 KCPPPPRKPKPSLKCNFRGGE-------FFTPPDLEAVFI 116
CPPPP+K + R F P DL ++F+
Sbjct: 276 VCPPPPKKRQRLAVTTRRTSTQSQERKFFQVPDDLTSIFL 395
>TC86635 weakly similar to GP|9758600|dbj|BAB09233.1
gene_id:MDF20.10~pir||T08929~similar to unknown protein
{Arabidopsis thaliana}, partial (32%)
Length = 1963
Score = 34.7 bits (78), Expect = 0.009
Identities = 16/34 (47%), Positives = 23/34 (67%)
Frame = +2
Query: 43 EKTEQHEEEEEEEEEETFMEEEEEECSTTPKGEE 76
EKTE EEEEE +E+T + +EE+ + KGE+
Sbjct: 116 EKTEAETEEEEEADEDTIDKSKEEDKAEGSKGEK 217
Score = 26.6 bits (57), Expect = 2.6
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = +2
Query: 43 EKTEQHEEEEEEEEEETFMEEEEEECSTTPKGEEA 77
E+ + +E+ EEE EE+ +E+E+ + T + EEA
Sbjct: 50 EEGDDNEKSEEETEEKEEGDEKEKTEAETEEEEEA 154
Score = 25.4 bits (54), Expect = 5.7
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +2
Query: 43 EKTEQHEEEEEEEEEETFMEEEEEECSTTPKGEE 76
E ++ + E EE+EE E+ EEE +G+E
Sbjct: 11 EGNDEEKTEVEEKEEGDDNEKSEEETEEKEEGDE 112
>CB891684 similar to GP|22450578|gb| hypothetical protein {Oryza sativa
(japonica cultivar-group)}, partial (12%)
Length = 460
Score = 34.3 bits (77), Expect = 0.012
Identities = 18/55 (32%), Positives = 30/55 (53%), Gaps = 3/55 (5%)
Frame = +3
Query: 43 EKTEQHEE---EEEEEEEETFMEEEEEECSTTPKGEEARIPATLKCPPPPRKPKP 94
E TE+H++ E+E EE++ +E++E+E + + AT K PP P P
Sbjct: 261 EDTEEHQQNHLEQEPEEDKKEVEDKEQEVLEVARFNYGGVAATTKKSPPRSFPPP 425
>TC93240 weakly similar to GP|14335170|gb|AAK59865.1 AT5g51070/K3K7_27
{Arabidopsis thaliana}, partial (8%)
Length = 700
Score = 34.3 bits (77), Expect = 0.012
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = -3
Query: 43 EKTEQHEEEEEEEEEETFMEEEEEE 67
E+ E+ EEEEEEEEEE F+ +E E
Sbjct: 248 EEEEEEEEEEEEEEEERFL*DERNE 174
Score = 32.7 bits (73), Expect = 0.036
Identities = 18/26 (69%), Positives = 20/26 (76%)
Frame = -3
Query: 42 VEKTEQHEEEEEEEEEETFMEEEEEE 67
V+ +E EEEEEEEEEE EEEEEE
Sbjct: 269 VDVSEVKEEEEEEEEEE---EEEEEE 201
Score = 26.2 bits (56), Expect = 3.4
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = -3
Query: 43 EKTEQHEEEEEEEEEETFMEEEEEE 67
E+ E+ EEEEEEEE E E E
Sbjct: 242 EEEEEEEEEEEEEERFL*DERNERE 168
>BE204345 similar to GP|15126717|gb| Similar to ectoplacental cone invasive
trophoblast giant cells extraembryonic ectoderm and,
partial (2%)
Length = 325
Score = 33.9 bits (76), Expect = 0.016
Identities = 20/56 (35%), Positives = 28/56 (49%), Gaps = 3/56 (5%)
Frame = +1
Query: 43 EKTEQHEEEEEEEEEETFMEEEEEECSTTPKGEEARIPATLKCPPPP---RKPKPS 95
E+ EEEE +EE+ + E+EEEE + T + K PPP PKP+
Sbjct: 70 EEDSSSEEEEGDEEDGSSSEDEEEEDNQTQQTPSKDSKPASKNPPPSTPISNPKPA 237
>TC88509 similar to PIR|T01826|T01826 microfibril-associated protein homolog
T15F16.8 - Arabidopsis thaliana, partial (83%)
Length = 1306
Score = 33.5 bits (75), Expect = 0.021
Identities = 25/67 (37%), Positives = 32/67 (47%)
Frame = +1
Query: 30 RRPLKPIYTTTPVEKTEQHEEEEEEEEEETFMEEEEEECSTTPKGEEARIPATLKCPPPP 89
RR +K E+ EEEEEEEEEE EEEEE T EE A +K P
Sbjct: 445 RRRIKEKLRQRDQEEALPQEEEEEEEEEE---EEEEESDYETDSDEEYTGVAMVKPVFVP 615
Query: 90 RKPKPSL 96
+ + ++
Sbjct: 616 KSERDTI 636
>BG586394 similar to GP|7295463|gb| CG4835 gene product {Drosophila
melanogaster}, partial (2%)
Length = 734
Score = 33.1 bits (74), Expect = 0.028
Identities = 23/58 (39%), Positives = 27/58 (45%), Gaps = 2/58 (3%)
Frame = +1
Query: 38 TTTPVEK--TEQHEEEEEEEEEETFMEEEEEECSTTPKGEEARIPATLKCPPPPRKPK 93
TTT EK T E EET E+ E+E +TTP+ E P T P P K K
Sbjct: 493 TTTASEKNKTTTTEPTVPTVSEETPTEKPEKETTTTPETEATTQPETDNTPTNPEKNK 666
>TC91327 similar to GP|22597168|gb|AAN03471.1 unknown protein {Glycine max},
partial (70%)
Length = 738
Score = 33.1 bits (74), Expect = 0.028
Identities = 18/64 (28%), Positives = 30/64 (46%)
Frame = +1
Query: 31 RPLKPIYTTTPVEKTEQHEEEEEEEEEETFMEEEEEECSTTPKGEEARIPATLKCPPPPR 90
+P +P+ P + E + + E+ +E +E E+ K +E P PPPP
Sbjct: 313 KPKEPVKPKEPEKPKEPEKPKNPEKPKEPEKPKEPEKPKEPEKPKEPEKPKEKPAPPPP- 489
Query: 91 KPKP 94
+PKP
Sbjct: 490 EPKP 501
Score = 25.4 bits (54), Expect = 5.7
Identities = 17/65 (26%), Positives = 26/65 (39%)
Frame = +1
Query: 31 RPLKPIYTTTPVEKTEQHEEEEEEEEEETFMEEEEEECSTTPKGEEARIPATLKCPPPPR 90
+P +P P + E + +E E+ +E E PK E P PPP
Sbjct: 385 KPKEPEKPKEPEKPKEPEKPKEPEKPKEKPAPPPPEPKPEPPKQPEK--PKEKPAPPPQP 558
Query: 91 KPKPS 95
P+P+
Sbjct: 559 MPEPA 573
>TC87847 similar to GP|15929245|gb|AAH15068.1 Similar to adaptor-related
protein complex AP-3 beta 1 subunit {Mus musculus},
partial (2%)
Length = 931
Score = 33.1 bits (74), Expect = 0.028
Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 5/75 (6%)
Frame = +1
Query: 43 EKTEQHEEEEEEEEEETFMEEEEEECSTTPKGEEARIPATLKCPPPPR-----KPKPSLK 97
++ EEEE +EE+ + E+EEEE + T + K PPP KP S
Sbjct: 178 DEDSSSEEEEGDEEDGSSSEDEEEEDNQTQQTPSKDSKPASKNPPPSTPISNPKPAESES 357
Query: 98 CNFRGGEFFTPPDLE 112
+ G E T D E
Sbjct: 358 GSESGSESGTESDSE 402
Score = 31.2 bits (69), Expect = 0.10
Identities = 26/72 (36%), Positives = 36/72 (49%), Gaps = 10/72 (13%)
Frame = +1
Query: 34 KPIYTTTPVEKT--EQHE----EEEEEEEEE--TFMEEEEEECSTTPKGEEARIPATLKC 85
+P T P +K EQ E EEEE +EE+ + +EEEE+ T + PA+
Sbjct: 130 QPPSTQKPADKVVNEQDEDSSSEEEEGDEEDGSSSEDEEEEDNQTQQTPSKDSKPASKNP 309
Query: 86 PP--PPRKPKPS 95
PP P PKP+
Sbjct: 310 PPSTPISNPKPA 345
>TC87846 similar to GP|5821151|dbj|BAA83717.1 RNA binding protein {Homo
sapiens}, partial (2%)
Length = 550
Score = 33.1 bits (74), Expect = 0.028
Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 5/75 (6%)
Frame = +1
Query: 43 EKTEQHEEEEEEEEEETFMEEEEEECSTTPKGEEARIPATLKCPPPPR-----KPKPSLK 97
++ EEEE +EE+ + E+EEEE + T + K PPP KP S
Sbjct: 160 DEDSSSEEEEGDEEDGSSSEDEEEEDNQTQQTPSKDSKPASKNPPPSTPISNPKPAESES 339
Query: 98 CNFRGGEFFTPPDLE 112
+ G E T D E
Sbjct: 340 GSESGSESGTESDSE 384
Score = 31.2 bits (69), Expect = 0.10
Identities = 26/72 (36%), Positives = 36/72 (49%), Gaps = 10/72 (13%)
Frame = +1
Query: 34 KPIYTTTPVEKT--EQHE----EEEEEEEEE--TFMEEEEEECSTTPKGEEARIPATLKC 85
+P T P +K EQ E EEEE +EE+ + +EEEE+ T + PA+
Sbjct: 112 QPPSTQKPADKVVNEQDEDSSSEEEEGDEEDGSSSEDEEEEDNQTQQTPSKDSKPASKNP 291
Query: 86 PP--PPRKPKPS 95
PP P PKP+
Sbjct: 292 PPSTPISNPKPA 327
>TC79394 weakly similar to PIR|T49019|T49019 probable RNA binding protein -
Arabidopsis thaliana, partial (74%)
Length = 1909
Score = 33.1 bits (74), Expect = 0.028
Identities = 19/46 (41%), Positives = 26/46 (56%)
Frame = +2
Query: 42 VEKTEQHEEEEEEEEEETFMEEEEEECSTTPKGEEARIPATLKCPP 87
VE E+ EEEEEEEEEE +EEE + + ++ + L PP
Sbjct: 299 VEVEEEVEEEEEEEEEEE-VEEESKPLDEEDEADKKKHAELLALPP 433
Score = 30.4 bits (67), Expect = 0.18
Identities = 17/31 (54%), Positives = 19/31 (60%)
Frame = +2
Query: 46 EQHEEEEEEEEEETFMEEEEEECSTTPKGEE 76
E+ E EEE EEEE EEEE E + P EE
Sbjct: 293 EEVEVEEEVEEEEEEEEEEEVEEESKPLDEE 385
Score = 29.3 bits (64), Expect = 0.40
Identities = 16/31 (51%), Positives = 17/31 (54%)
Frame = +2
Query: 43 EKTEQHEEEEEEEEEETFMEEEEEECSTTPK 73
E+ E E E EEE EE EEEEEE K
Sbjct: 278 EEVEYEEVEVEEEVEEEEEEEEEEEVEEESK 370
Score = 28.5 bits (62), Expect = 0.68
Identities = 19/36 (52%), Positives = 22/36 (60%), Gaps = 1/36 (2%)
Frame = +2
Query: 43 EKTEQHEE-EEEEEEEETFMEEEEEECSTTPKGEEA 77
E+ E EE EEEEEEEE EE EEE + +EA
Sbjct: 293 EEVEVEEEVEEEEEEEEE--EEVEEESKPLDEEDEA 394
Score = 28.1 bits (61), Expect = 0.89
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +2
Query: 43 EKTEQHEEEEEEEEEETFMEEEEEE 67
E +E+ E EE E EE EEEEEE
Sbjct: 266 ESSEEEVEYEEVEVEEEVEEEEEEE 340
Score = 27.7 bits (60), Expect = 1.2
Identities = 15/36 (41%), Positives = 21/36 (57%)
Frame = +2
Query: 43 EKTEQHEEEEEEEEEETFMEEEEEECSTTPKGEEAR 78
E++ + E E EE E E +EEEEEE EE++
Sbjct: 263 EESSEEEVEYEEVEVEEEVEEEEEEEEEEEVEEESK 370
Score = 25.4 bits (54), Expect = 5.7
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2
Query: 43 EKTEQHEEEEEEEEEETFMEEEEEECSTTPKGEE 76
+ ++ EEE E EE +EEE EE + EE
Sbjct: 251 DNDQEESSEEEVEYEEVEVEEEVEEEEEEEEEEE 352
>TC90584 similar to GP|22136810|gb|AAM91749.1 unknown protein {Arabidopsis
thaliana}, partial (18%)
Length = 686
Score = 32.7 bits (73), Expect = 0.036
Identities = 19/48 (39%), Positives = 24/48 (49%), Gaps = 7/48 (14%)
Frame = -2
Query: 32 PLKPIYTTTPVEKTEQHE-------EEEEEEEEETFMEEEEEECSTTP 72
P P+ PV + E E E+EEEEE+E EEE+EE P
Sbjct: 235 PPPPLLAPLPVSEEESAEPLEEEAAEDEEEEEDEAAEEEEDEEEEVGP 92
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.309 0.130 0.378
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,233,565
Number of Sequences: 36976
Number of extensions: 75521
Number of successful extensions: 2505
Number of sequences better than 10.0: 278
Number of HSP's better than 10.0 without gapping: 1122
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1748
length of query: 123
length of database: 9,014,727
effective HSP length: 84
effective length of query: 39
effective length of database: 5,908,743
effective search space: 230440977
effective search space used: 230440977
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 52 (24.6 bits)
Lotus: description of TM0076a.6